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Mouse SNP Summary
Symbol
Name
ID
Rr562294
regulatory region 562294
MGI:8024426

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SNP ID
(GRCm39)
Map Position
(GRCm39)
Gene & Category Variation
Type
Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
129X1/SvJ
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PL/J
PWD/PhJ
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs231015393
MGI SNP Detail
Alliance Variant
Chr2:105634603 Elp4 Intron
Rr562294 1895 bp proximal
SNP A/T A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A T A A A A
rs250173031
MGI SNP Detail
Alliance Variant
Chr2:105634612 Elp4 Intron
Rr562294 1886 bp proximal
SNP A/C A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A C A A A A
rs27428911
MGI SNP Detail
Alliance Variant
Chr2:105634613 Elp4 Intron
Rr562294 1885 bp proximal
SNP C/T C C C C C T C C C C T C C C C
rs240119892
MGI SNP Detail
Alliance Variant
Chr2:105634617 Elp4 Intron
Rr562294 1881 bp proximal
SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs262714318
MGI SNP Detail
Alliance Variant
Chr2:105634682 Elp4 Intron
Rr562294 1816 bp proximal
SNP C/T C C C C C C C C C C T C C C C C C C C C T T C C C C T C C C C C T C C C C C C T C C C C C C C C C C C C
rs27428910
MGI SNP Detail
Alliance Variant
Chr2:105634689 Elp4 Intron
Rr562294 1809 bp proximal
SNP C/T C C C C C T C C C C C C C
rs245884498
MGI SNP Detail
Alliance Variant
Chr2:105634785 Elp4 Intron
Rr562293 within coordinates of
Rr562294 1713 bp proximal
SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs257854286
MGI SNP Detail
Alliance Variant
Chr2:105634924 Elp4 Intron
Rr562293 within coordinates of
Rr562294 1574 bp proximal
SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs240253503
MGI SNP Detail
Alliance Variant
Chr2:105634956 Elp4 Intron
Rr562293 within coordinates of
Rr562294 1542 bp proximal
SNP C/T C T
rs217828986
MGI SNP Detail
Alliance Variant
Chr2:105634957 Elp4 Intron
Rr562293 within coordinates of
Rr562294 1541 bp proximal
SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs236542440
MGI SNP Detail
Alliance Variant
Chr2:105635182 Elp4 Intron
Rr562293 within coordinates of
Rr562294 1316 bp proximal
SNP C/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G C G G G G
rs258888007
MGI SNP Detail
Alliance Variant
Chr2:105635213 Elp4 Intron
Rr562293 within coordinates of
Rr562294 1285 bp proximal
SNP G/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T G T T T T
rs27428909
MGI SNP Detail
Alliance Variant
Chr2:105635239 Elp4 Intron
Rr562293 within coordinates of
Rr562294 1259 bp proximal
SNP A/G A A A A A A G A A A A A A A A
rs245566880
MGI SNP Detail
Alliance Variant
Chr2:105635262 Elp4 Intron
Rr562293 within coordinates of
Rr562294 1236 bp proximal
SNP A/G A A A A A A A A A A A A A A A A A A A G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A
rs27428908
MGI SNP Detail
Alliance Variant
Chr2:105635272 Elp4 Intron
Rr562293 within coordinates of
Rr562294 1226 bp proximal
SNP A/C A A A A A A C A A A A A A A A
rs230064012
MGI SNP Detail
Alliance Variant
Chr2:105635283 Elp4 Intron
Rr562293 within coordinates of
Rr562294 1215 bp proximal
SNP C/G C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C G C C C C
rs256681517
MGI SNP Detail
Alliance Variant
Chr2:105635333 Elp4 Intron
Rr562294 1165 bp proximal
SNP C/T T T T T T T T T T T T T T T T T T T T C T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T
rs27428907
MGI SNP Detail
Alliance Variant
Chr2:105635557 Elp4 Intron
Rr562294 941 bp proximal
SNP G/T T T T T T G T T T T T T
rs225362804
MGI SNP Detail
Alliance Variant
Chr2:105635558 Elp4 Intron
Rr562294 940 bp proximal
SNP A/G A A A A A A A A A A A A A A A A A G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A
rs248260751
MGI SNP Detail
Alliance Variant
Chr2:105635567 Elp4 Intron
Rr562294 931 bp proximal
SNP C/T C C C C C C C C T T C C C C C C C C C T T C C C C T C C C C C T C C C C C C T C C C C C C C C C
rs217725374
MGI SNP Detail
Alliance Variant
Chr2:105635881 Elp4 Intron
Rr562294 617 bp proximal
SNP G/T T T T T T T T T T T T T T T T T T T T G T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T
rs242725276
MGI SNP Detail
Alliance Variant
Chr2:105635884 Elp4 Intron
Rr562294 614 bp proximal
SNP C/T T T T T T T T T T T T T T T T T T T T C T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T
rs258432821
MGI SNP Detail
Alliance Variant
Chr2:105635902 Elp4 Intron
Rr562294 596 bp proximal
SNP C/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G C G G G G
rs27428906
MGI SNP Detail
Alliance Variant
Chr2:105635968 Elp4 Intron
Rr562294 530 bp proximal
SNP C/T T T C C C T C T C C T T C T T C T
rs235892425
MGI SNP Detail
Alliance Variant
Chr2:105636019 Elp4 Intron
Rr562294 479 bp proximal
SNP A/C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C A C C C C
SNP ID
(GRCm39)
Map Position
(GRCm39)
Gene & Category Variation
Type
Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
129X1/SvJ
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PL/J
PWD/PhJ
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs250199061
MGI SNP Detail
Alliance Variant
Chr2:105636072 Elp4 Intron
Rr562294 426 bp proximal
SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs217928711
MGI SNP Detail
Alliance Variant
Chr2:105636098 Elp4 Intron
Rr562294 400 bp proximal
SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs33100713
MGI SNP Detail
Alliance Variant
Chr2:105636146 Elp4 Intron
Rr562294 352 bp proximal
SNP A/C A C C
rs252541114
MGI SNP Detail
Alliance Variant
Chr2:105636220 Elp4 Intron
Rr562294 278 bp proximal
SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs27428905
MGI SNP Detail
Alliance Variant
Chr2:105636252 Elp4 Intron
Rr562294 246 bp proximal
SNP C/T C C C C C C T C C C C C C C C
rs581858418
MGI SNP Detail
Alliance Variant
Chr2:105636294 Elp4 Intron
Rr562294 204 bp proximal
SNP A/G G G G A G G G A A G G G G G G G A A A G A G G G G G G G G G G G G G G G G G G G G
rs222558559
MGI SNP Detail
Alliance Variant
Chr2:105636502 Elp4 Intron
Rr562294 within coordinates of
SNP A/C A A A A A A A A A A A A A A A A A A A C A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A
rs27428904
MGI SNP Detail
Alliance Variant
Chr2:105636512 Elp4 Intron
Rr562294 within coordinates of
SNP C/T T T T T T T C T T T T T T T T
rs27428903
MGI SNP Detail
Alliance Variant
Chr2:105636532 Elp4 Intron
Rr562294 within coordinates of
SNP A/G A A A A A A G A A A A A A A A
rs27428902
MGI SNP Detail
Alliance Variant
Chr2:105636585 Elp4 Intron
Rr562294 within coordinates of
SNP G/T G G G G G T G G G G T G G T G
rs27428901
MGI SNP Detail
Alliance Variant
Chr2:105636657 Elp4 Intron
Rr562294 within coordinates of
SNP G/T T T T T T T G T T T T T T T T
rs256134711
MGI SNP Detail
Alliance Variant
Chr2:105636685 Elp4 Intron
Rr562294 within coordinates of
SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs225326086
MGI SNP Detail
Alliance Variant
Chr2:105636711 Elp4 Intron
Rr562294 within coordinates of
SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs248378611
MGI SNP Detail
Alliance Variant
Chr2:105636827 Elp4 Intron
Rr562294 53 bp distal
SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs27428900
MGI SNP Detail
Alliance Variant
Chr2:105637017 Elp4 Intron
Rr562294 243 bp distal
Rr562295 within coordinates of
SNP G/T G G G G G G G G G G G G G T G
rs231916757
MGI SNP Detail
Alliance Variant
Chr2:105637042 Elp4 Intron
Rr562294 268 bp distal
Rr562295 within coordinates of
SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G
rs256934404
MGI SNP Detail
Alliance Variant
Chr2:105637043 Elp4 Intron
Rr562294 269 bp distal
Rr562295 within coordinates of
SNP G/T G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G T G G G G
rs216387648
MGI SNP Detail
Alliance Variant
Chr2:105637044 Elp4 Intron
Rr562294 270 bp distal
Rr562295 within coordinates of
SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs27428899
MGI SNP Detail
Alliance Variant
Chr2:105637182 Elp4 Intron
Rr562294 408 bp distal
Rr562295 within coordinates of
SNP C/T C C C C C T C C C C T C C T C
rs244265707
MGI SNP Detail
Alliance Variant
Chr2:105637215 Elp4 Intron
Rr562294 441 bp distal
Rr562295 within coordinates of
SNP A/T A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A T A A A A
rs211787638
MGI SNP Detail
Alliance Variant
Chr2:105637235 Elp4 Intron
Rr562294 461 bp distal
Rr562295 within coordinates of
SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs230647058
MGI SNP Detail
Alliance Variant
Chr2:105637259 Elp4 Intron
Rr562294 485 bp distal
Rr562295 within coordinates of
SNP A/G G G G G G G G G G G G G G G G G G G G A G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G
rs252619894
MGI SNP Detail
Alliance Variant
Chr2:105637280 Elp4 Intron
Rr562294 506 bp distal
Rr562295 within coordinates of
SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs226955072
MGI SNP Detail
Alliance Variant
Chr2:105637298 Elp4 Intron
Rr562294 524 bp distal
SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs237775526
MGI SNP Detail
Alliance Variant
Chr2:105637370 Elp4 Intron
Rr562294 596 bp distal
SNP A/T A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A T A A A A
SNP ID
(GRCm39)
Map Position
(GRCm39)
Gene & Category Variation
Type
Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
129X1/SvJ
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PL/J
PWD/PhJ
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs263295694
MGI SNP Detail
Alliance Variant
Chr2:105637374 Elp4 Intron
Rr562294 600 bp distal
SNP A/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T A T T T T
rs222731506
MGI SNP Detail
Alliance Variant
Chr2:105637402 Elp4 Intron
Rr562294 628 bp distal
SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs239936013
MGI SNP Detail
Alliance Variant
Chr2:105637501 Elp4 Intron
Rr562294 727 bp distal
SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs27428898
MGI SNP Detail
Alliance Variant
Chr2:105637548 Elp4 Intron
Rr562294 774 bp distal
SNP C/T C C T T T C C C C T C C C C C C C
rs218939044
MGI SNP Detail
Alliance Variant
Chr2:105637665 Elp4 Intron
Rr562294 891 bp distal
SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs242327386
MGI SNP Detail
Alliance Variant
Chr2:105637667 Elp4 Intron
Rr562294 893 bp distal
SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs261575401
MGI SNP Detail
Alliance Variant
Chr2:105637759 Elp4 Intron
Rr562294 985 bp distal
SNP G/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T G T T T T
rs27428897
MGI SNP Detail
Alliance Variant
Chr2:105637778 Elp4 Intron
Rr562294 1004 bp distal
SNP A/G G G G G G G A G G G G G G G G
rs253410106
MGI SNP Detail
Alliance Variant
Chr2:105637806 Elp4 Intron
Rr562294 1032 bp distal
SNP A/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T A T T T T
rs265155132
MGI SNP Detail
Alliance Variant
Chr2:105637863 Elp4 Intron
Rr562294 1089 bp distal
SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs229587527
MGI SNP Detail
Alliance Variant
Chr2:105637902 Elp4 Intron
Rr562294 1128 bp distal
SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs244370990
MGI SNP Detail
Alliance Variant
Chr2:105637936 Elp4 Intron
Rr562294 1162 bp distal
SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs211704215
MGI SNP Detail
Alliance Variant
Chr2:105637948 Elp4 Intron
Rr562294 1174 bp distal
SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs27428896
MGI SNP Detail
Alliance Variant
Chr2:105637980 Elp4 Intron
Rr562294 1206 bp distal
SNP C/T C C T C C C C C C C C C C C C C C
rs587370533
MGI SNP Detail
Alliance Variant
Chr2:105638037 Elp4 Intron
Rr562294 1263 bp distal
SNP G/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T G T T T T
rs27428895
MGI SNP Detail
Alliance Variant
Chr2:105638055 Elp4 Intron
Rr562294 1281 bp distal
SNP C/T C C T T T C C C C T C C C C C C C
rs580047124
MGI SNP Detail
Alliance Variant
Chr2:105638056 Elp4 Intron
Rr562294 1282 bp distal
SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs219136406
MGI SNP Detail
Alliance Variant
Chr2:105638089 Elp4 Intron
Rr562294 1315 bp distal
SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs239978565
MGI SNP Detail
Alliance Variant
Chr2:105638173 Elp4 Intron
Rr562294 1399 bp distal
SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs259315760
MGI SNP Detail
Alliance Variant
Chr2:105638228 Elp4 Intron
Rr562294 1454 bp distal
SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs27428894
MGI SNP Detail
Alliance Variant
Chr2:105638230 Elp4 Intron
Rr562294 1456 bp distal
SNP C/T T T T T C T T T T C T T C T
rs233011639
MGI SNP Detail
Alliance Variant
Chr2:105638270 Elp4 Intron
Rr562294 1496 bp distal
SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs249803913
MGI SNP Detail
Alliance Variant
Chr2:105638274 Elp4 Intron
Rr562294 1500 bp distal
SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs218904753
MGI SNP Detail
Alliance Variant
Chr2:105638316 Elp4 Intron
Rr562294 1542 bp distal
SNP C/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G C G G G G
rs242046594
MGI SNP Detail
Alliance Variant
Chr2:105638324 Elp4 Intron
Rr562294 1550 bp distal
SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
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Showing SNP(s) 1 - 75 of 75

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
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last database update
03/25/2025
MGI 6.24
The Jackson Laboratory

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