Mouse SNP Summary
|
Symbol Name ID |
Rr562518
regulatory region 562518 MGI:8024650 |
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SNPs to Text File
| SNP ID (GRCm39) |
Map Position (GRCm39) |
Gene & Category | Variation Type |
Allele Summary (all strains) |
129P2/OlaHsd
|
129S1/SvImJ
|
129S5/SvEvBrd
|
129X1/SvJ
|
A/J
|
AKR/J
|
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
|
BALB/cByJ
|
BALB/cJ
|
BTBR T<+> Itpr3<tf>/J
|
BUB/BnJ
|
C3H/HeH
|
C3H/HeJ
|
C57BL/10J
|
C57BL/10SnJ
|
C57BL/6J
|
C57BL/6NJ
|
C57BR/cdJ
|
C57L/J
|
C58/J
|
CAST/EiJ
|
CBA/J
|
CE/J
|
CZECHII/EiJ
|
DBA/1J
|
DBA/2J
|
FVB/NJ
|
I/LnJ
|
JF1/MsJ
|
KK/HlJ
|
LEWES/EiJ
|
LG/J
|
LP/J
|
MA/MyJ
|
MOLF/EiJ
|
NOD/ShiLtJ
|
NON/ShiLtJ
|
NZB/BlNJ
|
NZO/HlLtJ
|
NZW/LacJ
|
PL/J
|
PWK/PhJ
|
QSi3/Ianm
|
QSi5/Ianm
|
RF/J
|
RIIIS/J
|
SEA/GnJ
|
SJL/J
|
SM/J
|
SPRET/EiJ
|
ST/bJ
|
SWR/J
|
WSB/EiJ
|
ZALENDE/EiJ
|
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| rs243601458 MGI SNP Detail Alliance Variant |
Chr2:109764428 | Lgr4 Rr562518 |
SNP | C/G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | C | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | |
| rs214323258 MGI SNP Detail Alliance Variant |
Chr2:109764429 | Lgr4 Rr562518 |
SNP | A/G | A | A | A | A | A | A | A | A | A | A | G | A | A | A | A | A | A | A | A | A | G | G | A | A | A | A | G | A | A | A | A | A | G | A | A | A | A | A | G | G | A | A | A | A | A | A | A | A | A | A | A | A | ||
| rs229873031 MGI SNP Detail Alliance Variant |
Chr2:109764513 | Lgr4 Rr562518 |
SNP | A/T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | A | T | T | T | T | |
| rs256102651 MGI SNP Detail Alliance Variant |
Chr2:109764535 | Lgr4 Rr562518 |
SNP | A/G | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | G | A | A | A | A | |
| rs226183616 MGI SNP Detail Alliance Variant |
Chr2:109764552 | Lgr4 Rr562518 |
SNP | G/T | G | G | G | G | G | G | G | G | G | G | T | T | G | G | G | G | G | G | G | G | G | T | T | G | G | G | G | T | G | G | G | G | G | T | G | G | G | G | G | T | T | G | G | G | G | G | G | G | G | G | G | G | G | |
| rs240258505 MGI SNP Detail Alliance Variant |
Chr2:109764556 | Lgr4 Rr562518 |
SNP | A/G/T | G | G | G | G | G | G | G | G | G | G | T | G | G | G | G | G | G | G | G | G | T | T | G | G | G | G | T | G | G | G | G | G | T | G | G | G | G | G | T | T | G | G | G | G | G | G | G | A | G | G | G | G | ||
| rs264277566 MGI SNP Detail Alliance Variant |
Chr2:109764560 | Lgr4 Rr562518 |
SNP | C/G | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | G | C | C | C | C | |
| rs221079742 MGI SNP Detail Alliance Variant |
Chr2:109764577 | Lgr4 Rr562518 |
SNP | A/C | C | C | C | C | C | C | C | C | C | C | A | A | C | C | C | C | C | C | C | C | C | A | A | C | C | C | C | A | C | C | C | C | C | A | C | C | C | C | C | A | A | C | C | C | C | C | C | C | A | C | C | C | C | |
| rs241456285 MGI SNP Detail Alliance Variant |
Chr2:109764582 | Lgr4 Rr562518 |
SNP | C/T | C | C | C | C | C | C | C | C | C | C | T | T | C | C | C | C | C | C | C | C | C | T | T | C | C | C | C | T | C | C | C | C | C | C | C | C | C | C | C | T | T | C | C | C | C | C | C | C | C | C | C | C | C | |
| rs27492723 MGI SNP Detail Alliance Variant |
Chr2:109764610 | Lgr4 Rr562518 |
SNP | C/T | C | C | T | C | T | C | C | C | T | T | C | C | C | C | C | |||||||||||||||||||||||||||||||||||||||
| rs581993710 MGI SNP Detail Alliance Variant |
Chr2:109764662 | Lgr4 Rr562518 |
SNP | C/T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | C | T | T | T | T | |
| rs220406928 MGI SNP Detail Alliance Variant |
Chr2:109764701 | Lgr4 Rr562518 |
SNP | A/G | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | G | A | A | A | A | |
| rs585792599 MGI SNP Detail Alliance Variant |
Chr2:109764843 | Lgr4 Rr562518 |
SNP | A/G | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | G | A | A | A | A | |
| rs244386212 MGI SNP Detail Alliance Variant |
Chr2:109764899 | Lgr4 Rr562518 |
SNP | A/C | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | C | A | A | A | A | |
| rs262071823 MGI SNP Detail Alliance Variant |
Chr2:109765028 | Lgr4 Rr562518 |
SNP | A/C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | A | C | C | C | C | |
| rs234514748 MGI SNP Detail Alliance Variant |
Chr2:109765031 | Lgr4 Rr562518 |
SNP | C/T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | C | T | T | T | T | |
| rs248736917 MGI SNP Detail Alliance Variant |
Chr2:109765084 | Lgr4 Rr562518 |
SNP | C/T | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | T | C | C | C | C | |
| rs256901903 MGI SNP Detail Alliance Variant |
Chr2:109765172 | Lgr4 Rr562518 |
SNP | A/G | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | G | A | A | A | A | |
| rs27492722 MGI SNP Detail Alliance Variant |
Chr2:109765240 | Lgr4 Rr562518 |
SNP | A/G | G | G | G | G | G | G | G | G | G | G | G | G | A | |||||||||||||||||||||||||||||||||||||||||
| rs27492721 MGI SNP Detail Alliance Variant |
Chr2:109765256 | Lgr4 Rr562518 |
SNP | A/G | A | A | A | A | A | A | A | A | A | G | A | A | G | |||||||||||||||||||||||||||||||||||||||||
| rs214189171 MGI SNP Detail Alliance Variant |
Chr2:109765347 | Lgr4 Rr562518 |
SNP | G/T | T | T | T | T | T | T | T | T | T | T | G | T | T | T | T | T | T | T | T | T | G | G | T | T | T | T | G | T | T | T | T | T | G | T | T | T | T | T | G | G | T | T | T | T | T | T | T | G | T | T | T | T | ||
| rs227373374 MGI SNP Detail Alliance Variant |
Chr2:109765470 | Lgr4 Rr562518 |
SNP | A/G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | A | G | G | G | G | |
| rs254055925 MGI SNP Detail Alliance Variant |
Chr2:109765504 | Lgr4 Rr562518 |
SNP | C/T | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | T | C | C | C | C | |
| rs217799983 MGI SNP Detail Alliance Variant |
Chr2:109765545 | Lgr4 Rr562518 |
SNP | C/G | C | C | C | C | C | C | C | C | C | C | G | G | C | C | C | C | C | C | C | C | C | G | G | C | C | C | C | G | C | C | C | C | C | G | C | C | C | C | C | G | G | C | C | C | C | C | C | C | G | C | C | C | C | |
| rs27492720 MGI SNP Detail Alliance Variant |
Chr2:109765550 | Lgr4 Rr562518 |
SNP | A/C | A | A | A | A | A | A | A | C | A | A | ||||||||||||||||||||||||||||||||||||||||||||
| SNP ID (GRCm39) |
Map Position (GRCm39) |
Gene & Category | Variation Type |
Allele Summary (all strains) |
129P2/OlaHsd
|
129S1/SvImJ
|
129S5/SvEvBrd
|
129X1/SvJ
|
A/J
|
AKR/J
|
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
|
BALB/cByJ
|
BALB/cJ
|
BTBR T<+> Itpr3<tf>/J
|
BUB/BnJ
|
C3H/HeH
|
C3H/HeJ
|
C57BL/10J
|
C57BL/10SnJ
|
C57BL/6J
|
C57BL/6NJ
|
C57BR/cdJ
|
C57L/J
|
C58/J
|
CAST/EiJ
|
CBA/J
|
CE/J
|
CZECHII/EiJ
|
DBA/1J
|
DBA/2J
|
FVB/NJ
|
I/LnJ
|
JF1/MsJ
|
KK/HlJ
|
LEWES/EiJ
|
LG/J
|
LP/J
|
MA/MyJ
|
MOLF/EiJ
|
NOD/ShiLtJ
|
NON/ShiLtJ
|
NZB/BlNJ
|
NZO/HlLtJ
|
NZW/LacJ
|
PL/J
|
PWK/PhJ
|
QSi3/Ianm
|
QSi5/Ianm
|
RF/J
|
RIIIS/J
|
SEA/GnJ
|
SJL/J
|
SM/J
|
SPRET/EiJ
|
ST/bJ
|
SWR/J
|
WSB/EiJ
|
ZALENDE/EiJ
|
| rs243065411 MGI SNP Detail Alliance Variant |
Chr2:109765574 | Lgr4 Rr562518 |
SNP | A/G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | A | G | G | G | G | |
| rs258617279 MGI SNP Detail Alliance Variant |
Chr2:109765579 | Lgr4 Rr562518 |
SNP | C/T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | C | T | T | T | T | |
| rs215840243 MGI SNP Detail Alliance Variant |
Chr2:109765580 | Lgr4 Rr562518 |
SNP | A/G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | A | G | G | G | G | |
| rs234864893 MGI SNP Detail Alliance Variant |
Chr2:109765620 | Lgr4 Rr562518 |
SNP | C/T | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | T | C | C | C | C | |
| rs251255705 MGI SNP Detail Alliance Variant |
Chr2:109765746 | Lgr4 Rr562518 |
SNP | C/T | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | T | C | C | C | C | |
| rs220470888 MGI SNP Detail Alliance Variant |
Chr2:109765763 | Lgr4 Rr562518 |
SNP | G/T | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | T | G | G | G | G | G | G | G | G | G | G | G | G | |
| rs241393413 MGI SNP Detail Alliance Variant |
Chr2:109765833 | Lgr4 Rr562518 |
SNP | C/G | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | G | C | C | C | C | |
| rs261734957 MGI SNP Detail Alliance Variant |
Chr2:109765838 | Lgr4 Rr562518 |
SNP | C/G | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | G | C | C | C | C | |
| rs579992259 MGI SNP Detail Alliance Variant |
Chr2:109765882 | Lgr4 Rr562518 |
SNP | A/G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | A | G | G | G | G | |
| rs226057840 MGI SNP Detail Alliance Variant |
Chr2:109765944 | Lgr4 Rr562518 |
SNP | C/T | C | C | C | C | C | C | C | C | C | C | T | T | C | C | C | C | C | C | C | C | C | T | T | C | C | C | C | T | C | C | C | C | C | T | C | C | C | C | C | T | T | C | C | C | C | C | C | C | C | C | C | C | C | |
| rs251935686 MGI SNP Detail Alliance Variant |
Chr2:109765988 | Lgr4 Rr562518 |
SNP | C/T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | C | T | T | T | T | |
| rs257647463 MGI SNP Detail Alliance Variant |
Chr2:109766016 | Lgr4 Rr562518 |
SNP | C/T | T | T | T | T | T | T | T | T | T | T | C | C | T | T | T | T | T | T | T | T | T | C | C | T | T | T | T | C | T | T | T | T | T | C | T | T | T | T | T | C | C | T | T | T | T | T | T | T | T | T | T | T | T | |
| rs3660861 MGI SNP Detail Alliance Variant |
Chr2:109766021 | Lgr4 Rr562518 |
SNP | A/C | C | C | A | A | A | |||||||||||||||||||||||||||||||||||||||||||||||||
| rs237198138 MGI SNP Detail Alliance Variant |
Chr2:109766131 | Lgr4 Rr562518 |
SNP | G/T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | G | T | T | T | T | |
| rs255893340 MGI SNP Detail Alliance Variant |
Chr2:109766176 | Lgr4 Rr562518 |
SNP | C/T | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | T | C | |
| rs27492719 MGI SNP Detail Alliance Variant |
Chr2:109766217 | Lgr4 Rr562518 |
SNP | C/T | T | T | T | T | T | T | T | T | T | C | T | T | T | |||||||||||||||||||||||||||||||||||||||||
| rs249653954 MGI SNP Detail Alliance Variant |
Chr2:109766230 | Lgr4 Rr562518 |
SNP | C/T | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | T | C | |
| rs27492718 MGI SNP Detail Alliance Variant |
Chr2:109766267 | Lgr4 Rr562518 |
SNP | C/T | T | T | T | T | T | T | T | T | T | C | T | T | T | |||||||||||||||||||||||||||||||||||||||||
| rs233745117 MGI SNP Detail Alliance Variant |
Chr2:109766282 | Lgr4 Rr562518 |
SNP | A/G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | A | G | G | G | G | |
| rs246307139 MGI SNP Detail Alliance Variant |
Chr2:109766416 | Lgr4 Rr562518 |
SNP | C/T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | C | T | T | T | T | |
| rs581899599 MGI SNP Detail Alliance Variant |
Chr2:109766454 | Lgr4 Rr562518 |
SNP | C/T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | C | C | T | T | T | T | C | T | T | T | T | T | C | T | T | T | T | T | C | C | T | T | T | T | T | T | T | C | T | T | T | T | |||
| rs215895704 MGI SNP Detail Alliance Variant |
Chr2:109766462 | Lgr4 Rr562518 |
SNP | C/G | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | G | C | ||
| rs231659643 MGI SNP Detail Alliance Variant |
Chr2:109766468 | Lgr4 Rr562518 |
SNP | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | ||||||
| rs251307574 MGI SNP Detail Alliance Variant |
Chr2:109766472 | Lgr4 Rr562518 |
SNP | C/G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | C | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | ||||||||
| rs214450610 MGI SNP Detail Alliance Variant |
Chr2:109766495 | Lgr4 Rr562518 |
SNP | C/T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | C | T | T | T | T | |
| SNP ID (GRCm39) |
Map Position (GRCm39) |
Gene & Category | Variation Type |
Allele Summary (all strains) |
129P2/OlaHsd
|
129S1/SvImJ
|
129S5/SvEvBrd
|
129X1/SvJ
|
A/J
|
AKR/J
|
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
|
BALB/cByJ
|
BALB/cJ
|
BTBR T<+> Itpr3<tf>/J
|
BUB/BnJ
|
C3H/HeH
|
C3H/HeJ
|
C57BL/10J
|
C57BL/10SnJ
|
C57BL/6J
|
C57BL/6NJ
|
C57BR/cdJ
|
C57L/J
|
C58/J
|
CAST/EiJ
|
CBA/J
|
CE/J
|
CZECHII/EiJ
|
DBA/1J
|
DBA/2J
|
FVB/NJ
|
I/LnJ
|
JF1/MsJ
|
KK/HlJ
|
LEWES/EiJ
|
LG/J
|
LP/J
|
MA/MyJ
|
MOLF/EiJ
|
NOD/ShiLtJ
|
NON/ShiLtJ
|
NZB/BlNJ
|
NZO/HlLtJ
|
NZW/LacJ
|
PL/J
|
PWK/PhJ
|
QSi3/Ianm
|
QSi5/Ianm
|
RF/J
|
RIIIS/J
|
SEA/GnJ
|
SJL/J
|
SM/J
|
SPRET/EiJ
|
ST/bJ
|
SWR/J
|
WSB/EiJ
|
ZALENDE/EiJ
|
| rs236518901 MGI SNP Detail Alliance Variant |
Chr2:109766503 | Lgr4 Rr562518 |
SNP | A/T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | A | T | T | T | T | |
| rs256456318 MGI SNP Detail Alliance Variant |
Chr2:109766514 | Lgr4 Rr562518 |
SNP | C/T | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | T | C | C | C | C | |
| rs226335984 MGI SNP Detail Alliance Variant |
Chr2:109766523 | Lgr4 Rr562518 |
SNP | A/G | G | G | G | G | G | G | G | G | G | G | A | G | G | G | G | G | G | G | G | G | A | A | G | G | G | G | A | G | G | G | G | G | A | G | G | G | G | G | A | A | G | G | G | G | G | G | G | A | G | G | G | G | ||
| rs240613940 MGI SNP Detail Alliance Variant |
Chr2:109766527 | Lgr4 Rr562518 |
SNP | A/C | C | C | C | C | C | C | C | C | C | C | A | C | C | C | C | C | C | C | C | C | A | A | C | C | C | C | A | C | C | C | C | C | A | C | C | C | C | C | A | A | C | C | C | C | C | C | C | A | C | C | C | C | ||
| rs27492717 MGI SNP Detail Alliance Variant |
Chr2:109766538 | Lgr4 Rr562518 |
SNP | A/G | A | A | A | A | A | A | A | A | A | A | G | |||||||||||||||||||||||||||||||||||||||||||
| rs221700789 MGI SNP Detail Alliance Variant |
Chr2:109766568 | Lgr4 Rr562518 |
SNP | C/G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | C | G | G | G | G | |
| rs237936266 MGI SNP Detail Alliance Variant |
Chr2:109766569 | Lgr4 Rr562518 |
SNP | C/T | T | T | T | T | T | T | T | T | T | T | C | T | T | T | T | T | T | T | T | T | C | C | T | T | T | T | C | T | T | T | T | T | C | T | T | T | T | T | C | C | T | T | T | T | T | T | T | C | T | T | T | T | ||
| rs255975301 MGI SNP Detail Alliance Variant |
Chr2:109766575 | Lgr4 Rr562518 |
SNP | C/G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | C | G | G | G | G | |
| rs219902203 MGI SNP Detail Alliance Variant |
Chr2:109766578 | Lgr4 Rr562518 |
SNP | C/G | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | G | C | C | C | C | |
| rs244555669 MGI SNP Detail Alliance Variant |
Chr2:109766580 | Lgr4 Rr562518 |
SNP | C/T | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | T | C | C | C | C | |
| rs263912979 MGI SNP Detail Alliance Variant |
Chr2:109766586 | Lgr4 Rr562518 |
SNP | G/T | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | T | G | G | G | G | |
| rs234678260 MGI SNP Detail Alliance Variant |
Chr2:109766598 | Lgr4 Rr562518 |
SNP | C/T | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | T | C | C | C | C | |
| rs246366202 MGI SNP Detail Alliance Variant |
Chr2:109766626 | Lgr4 Rr562518 |
SNP | A/G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | A | G | G | G | G | |
| rs259768264 MGI SNP Detail Alliance Variant |
Chr2:109766631 | Lgr4 Rr562518 |
SNP | G/T | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | T | G | G | G | G | |
| rs225770882 MGI SNP Detail Alliance Variant |
Chr2:109766653 | Lgr4 Rr562518 |
SNP | C/T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | C | T | T | T | T | |
| rs245701464 MGI SNP Detail Alliance Variant |
Chr2:109766670 | Lgr4 Rr562518 |
SNP | A/G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | A | G | G | G | G | |
| rs215299564 MGI SNP Detail Alliance Variant |
Chr2:109766671 | Lgr4 Rr562518 |
SNP | G/T | G | G | G | G | G | G | G | G | G | G | T | G | G | G | G | G | G | G | G | G | T | T | G | G | G | G | T | G | G | G | G | G | T | G | G | G | G | G | T | T | G | G | G | G | G | G | G | T | G | G | G | G | ||
| rs29584095 MGI SNP Detail Alliance Variant |
Chr2:109766692 | Lgr4 Rr562518 |
SNP | A/G | G | A | G | A | G | |||||||||||||||||||||||||||||||||||||||||||||||||
| rs254247452 MGI SNP Detail Alliance Variant |
Chr2:109766697 | Lgr4 Rr562518 |
SNP | C/T | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | T | C | C | C | C | |
| rs218297930 MGI SNP Detail Alliance Variant |
Chr2:109766704 | Lgr4 Rr562518 |
SNP | C/T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | C | T | T | T | T | |
| rs27492716 MGI SNP Detail Alliance Variant |
Chr2:109766711 | Lgr4 Rr562518 |
SNP | G/T | T | T | G | G | G | G | G | G | G | G | G | T | G | T | T | G | ||||||||||||||||||||||||||||||||||||||
| rs251504238 MGI SNP Detail Alliance Variant |
Chr2:109766731 | Lgr4 Rr562518 |
SNP | C/T | T | T | T | T | T | T | T | T | T | T | C | T | T | T | T | T | T | T | T | T | C | T | T | T | T | T | C | T | T | T | T | T | T | T | T | T | T | T | C | T | T | T | T | T | T | T | T | T | T | T | T | T | ||
| rs221614003 MGI SNP Detail Alliance Variant |
Chr2:109766740 | Lgr4 Rr562518 |
SNP | C/G | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | G | C | C | C | C | |
| rs27492715 MGI SNP Detail Alliance Variant |
Chr2:109766869 | Lgr4 Rr562518 |
SNP | G/T | T | T | T | T | T | T | T | T | T | G | T | T | G | |||||||||||||||||||||||||||||||||||||||||
| rs250847253 MGI SNP Detail Alliance Variant |
Chr2:109766985 | Lgr4 Rr562518 |
SNP | C/G | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | G | C | C | C | C | |
| SNP ID (GRCm39) |
Map Position (GRCm39) |
Gene & Category | Variation Type |
Allele Summary (all strains) |
129P2/OlaHsd
|
129S1/SvImJ
|
129S5/SvEvBrd
|
129X1/SvJ
|
A/J
|
AKR/J
|
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
|
BALB/cByJ
|
BALB/cJ
|
BTBR T<+> Itpr3<tf>/J
|
BUB/BnJ
|
C3H/HeH
|
C3H/HeJ
|
C57BL/10J
|
C57BL/10SnJ
|
C57BL/6J
|
C57BL/6NJ
|
C57BR/cdJ
|
C57L/J
|
C58/J
|
CAST/EiJ
|
CBA/J
|
CE/J
|
CZECHII/EiJ
|
DBA/1J
|
DBA/2J
|
FVB/NJ
|
I/LnJ
|
JF1/MsJ
|
KK/HlJ
|
LEWES/EiJ
|
LG/J
|
LP/J
|
MA/MyJ
|
MOLF/EiJ
|
NOD/ShiLtJ
|
NON/ShiLtJ
|
NZB/BlNJ
|
NZO/HlLtJ
|
NZW/LacJ
|
PL/J
|
PWK/PhJ
|
QSi3/Ianm
|
QSi5/Ianm
|
RF/J
|
RIIIS/J
|
SEA/GnJ
|
SJL/J
|
SM/J
|
SPRET/EiJ
|
ST/bJ
|
SWR/J
|
WSB/EiJ
|
ZALENDE/EiJ
|
| rs27492714 MGI SNP Detail Alliance Variant |
Chr2:109766992 | Lgr4 Rr562518 |
SNP | A/C | C | C | A | A | A | A | C | C | C | |||||||||||||||||||||||||||||||||||||||||||||
| rs220499167 MGI SNP Detail Alliance Variant |
Chr2:109767001 | Lgr4 Rr562518 |
SNP | C/T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | C | T | T | T | T | |
| rs241823177 MGI SNP Detail Alliance Variant |
Chr2:109767002 | Lgr4 Rr562518 |
SNP | A/G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | A | G | G | G | G | |
| rs27492713 MGI SNP Detail Alliance Variant |
Chr2:109767029 | Lgr4 Rr562518 |
SNP | A/T | T | T | T | T | T | T | T | T | A | T | T | T | ||||||||||||||||||||||||||||||||||||||||||
| rs226469078 MGI SNP Detail Alliance Variant |
Chr2:109767058 | Lgr4 Rr562518 |
SNP | A/G | G | G | G | G | G | G | G | G | G | G | A | G | G | G | G | G | G | G | G | G | A | A | G | G | G | G | A | G | G | G | G | G | A | G | G | G | G | G | A | A | G | G | G | G | G | G | G | A | G | G | G | G | ||
| rs240281925 MGI SNP Detail Alliance Variant |
Chr2:109767089 | Lgr4 Rr562518 |
SNP | C/T | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | T | C | C | C | C | |
| rs259833201 MGI SNP Detail Alliance Variant |
Chr2:109767185 | Lgr4 Rr562518 |
SNP | A/G | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | G | A | A | A | A | |
| rs225631873 MGI SNP Detail Alliance Variant |
Chr2:109767195 | Lgr4 Rr562518 |
SNP | A/G | G | G | G | G | G | G | G | G | G | G | A | A | G | G | G | G | G | G | G | G | G | A | A | G | G | G | G | A | G | G | G | G | G | A | G | G | G | G | G | A | A | G | G | G | G | G | G | G | G | G | G | G | G | |
| rs245573393 MGI SNP Detail Alliance Variant |
Chr2:109767222 | Lgr4 Rr562518 |
SNP | A/G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | A | G | G | G | G | |
| rs261493384 MGI SNP Detail Alliance Variant |
Chr2:109767356 | Lgr4 Rr562518 |
SNP | C/T | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | T | C | C | C | C | |
| rs229165103 MGI SNP Detail Alliance Variant |
Chr2:109767375 | Lgr4 Rr562518 |
SNP | A/G | G | G | G | G | G | G | G | G | G | G | A | A | G | G | G | G | G | G | G | G | G | A | A | G | G | G | G | A | G | G | G | G | G | A | G | G | G | G | G | A | A | G | G | G | G | G | G | G | A | G | G | G | G | |
| rs249988680 MGI SNP Detail Alliance Variant |
Chr2:109767399 | Lgr4 Rr562518 |
SNP | A/T | T | T | T | T | T | T | T | T | T | T | A | A | T | T | T | T | T | T | T | T | T | A | A | T | T | T | T | A | T | T | T | T | T | A | T | T | T | T | T | A | A | T | T | T | T | T | T | T | T | T | T | T | T | |
| rs218170582 MGI SNP Detail Alliance Variant |
Chr2:109767429 | Lgr4 Rr562518 |
SNP | A/T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | A | T | T | T | T | T | T | T | T | T | T | T | T | |
| rs235381886 MGI SNP Detail Alliance Variant |
Chr2:109767438 | Lgr4 Rr562518 |
SNP | C/G | G | G | G | G | G | G | G | G | G | G | C | C | G | G | G | G | G | G | G | G | G | C | C | G | G | G | G | C | G | G | G | G | G | C | G | G | G | G | G | C | C | G | G | G | G | G | G | G | C | G | G | G | G | |
| rs245417879 MGI SNP Detail Alliance Variant |
Chr2:109767461 | Lgr4 Rr562518 |
SNP | C/T | C | C | C | C | C | C | C | C | C | C | T | T | C | C | C | C | C | C | C | C | C | T | T | C | C | C | C | T | C | C | C | C | C | T | C | C | C | C | C | T | T | C | C | C | C | C | C | C | T | C | C | C | C | |
| rs585710786 MGI SNP Detail Alliance Variant |
Chr2:109767482 | Lgr4 Rr562518 |
SNP | A/G | G | G | G | G | G | G | G | G | G | G | A | G | G | G | G | G | G | G | G | G | A | G | G | G | G | G | A | G | G | G | G | G | G | G | G | G | G | G | A | G | G | G | G | G | G | G | G | G | G | G | G | G | ||
| rs27492712 MGI SNP Detail Alliance Variant |
Chr2:109767496 | Lgr4 Rr562518 |
SNP | G/T | G | G | G | G | G | G | G | T | G | G | G | |||||||||||||||||||||||||||||||||||||||||||
| rs216229293 MGI SNP Detail Alliance Variant |
Chr2:109767550 | Lgr4 Rr562518 |
SNP | C/T | C | C | C | C | C | C | C | C | C | C | T | T | C | C | C | C | C | C | C | C | C | T | T | C | C | C | C | T | C | C | C | C | C | T | C | C | C | C | C | T | T | C | C | C | C | C | C | C | T | C | C | C | C | |
| rs231670469 MGI SNP Detail Alliance Variant |
Chr2:109767575 | Lgr4 Rr562518 |
SNP | G/T | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | T | G | G | G | G | |
| rs262584462 MGI SNP Detail Alliance Variant |
Chr2:109767582 | Lgr4 Rr562518 |
SNP | A/G | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | G | A | A | A | A | |
| rs212415924 MGI SNP Detail Alliance Variant |
Chr2:109767596 | Lgr4 Rr562518 |
SNP | A/T | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | T | A | A | A | A | |
| rs237524172 MGI SNP Detail Alliance Variant |
Chr2:109767628 | Lgr4 Rr562518 |
SNP | C/T | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | T | C | C | C | C | |
| rs259971483 MGI SNP Detail Alliance Variant |
Chr2:109767648 | Lgr4 Rr562518 |
SNP | C/G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | C | G | G | G | G | |
| rs223153181 MGI SNP Detail Alliance Variant |
Chr2:109767661 | Lgr4 Rr562518 |
SNP | A/G | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | G | A | A | A | A | |
| rs240343430 MGI SNP Detail Alliance Variant |
Chr2:109767713 | Lgr4 Rr562518 |
SNP | A/T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | A | T | T | T | T |
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO) |
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last database update 03/18/2025 MGI 6.24 |
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