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Mouse SNP Summary
Symbol
Name
ID
Rr562687
regulatory region 562687
MGI:8024819

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Showing SNP(s) 1 - 71 of 71

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SNP ID
(GRCm39)
Map Position
(GRCm39)
Gene & Category Variation
Type
Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
129X1/SvJ
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PL/J
PWD/PhJ
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs27491391
MGI SNP Detail
Alliance Variant
Chr2:112384252 Aven Intron
Aven Noncoding-Transcript-Variant
Rr562687 758 bp proximal
SNP C/T T T T C T C C C T T T C T T C C
rs225666350
MGI SNP Detail
Alliance Variant
Chr2:112384288 Aven Intron
Aven Noncoding-Transcript-Variant
Rr562687 722 bp proximal
SNP A/G A A A A A A A A A A G A A A A A A A A A G G A A A A A A A A A G A A A A A G G A A A A A A A G A A A A
rs250886046
MGI SNP Detail
Alliance Variant
Chr2:112384299 Aven Intron
Aven Noncoding-Transcript-Variant
Rr562687 711 bp proximal
SNP A/G A A A A A A A A A A G A A A A A A A A A G G A A A A A A A A A G A A A A A G G A A A A A A A G A A A A
rs27491390
MGI SNP Detail
Alliance Variant
Chr2:112384350 Aven Intron
Aven Noncoding-Transcript-Variant
Rr562687 660 bp proximal
SNP C/T T T T C T C C C T T T C T T C C
rs27491389
MGI SNP Detail
Alliance Variant
Chr2:112384363 Aven Intron
Aven Noncoding-Transcript-Variant
Rr562687 647 bp proximal
SNP A/G G G G A G A G G G G G G G G G A
rs585004826
MGI SNP Detail
Alliance Variant
Chr2:112384512 Aven Intron
Aven Noncoding-Transcript-Variant
Rr562687 498 bp proximal
SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs27491388
MGI SNP Detail
Alliance Variant
Chr2:112384551 Aven Intron
Aven Noncoding-Transcript-Variant
Rr562687 459 bp proximal
SNP C/T C C C C C T C C C C T C C T C
rs27491387
MGI SNP Detail
Alliance Variant
Chr2:112384619 Aven Intron
Aven Noncoding-Transcript-Variant
Rr562687 391 bp proximal
SNP A/G A A A G A G A A A A A A A A A G
rs50962250
MGI SNP Detail
Alliance Variant
Chr2:112384687 Aven Intron
Aven Noncoding-Transcript-Variant
Rr562687 323 bp proximal
SNP C C C C
rs225246950
MGI SNP Detail
Alliance Variant
Chr2:112384699 Aven Intron
Aven Noncoding-Transcript-Variant
Rr562687 311 bp proximal
SNP A/T A T
rs237581175
MGI SNP Detail
Alliance Variant
Chr2:112384700 Aven Intron
Aven Noncoding-Transcript-Variant
Rr562687 310 bp proximal
SNP G/T G T
rs27491386
MGI SNP Detail
Alliance Variant
Chr2:112384707 Aven Intron
Aven Noncoding-Transcript-Variant
Rr562687 303 bp proximal
SNP A/G A A A G A G A A A A A A A A A
rs215358814
MGI SNP Detail
Alliance Variant
Chr2:112384738 Aven Intron
Aven Noncoding-Transcript-Variant
Rr562687 272 bp proximal
SNP G/T G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G T G G G G
rs234804497
MGI SNP Detail
Alliance Variant
Chr2:112384740 Aven Intron
Aven Noncoding-Transcript-Variant
Rr562687 270 bp proximal
SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs27491385
MGI SNP Detail
Alliance Variant
Chr2:112384742 Aven Intron
Aven Noncoding-Transcript-Variant
Rr562687 268 bp proximal
SNP C/T C C C C C C C C C C C C C T C
rs50696142
MGI SNP Detail
Alliance Variant
Chr2:112384787 Aven Intron
Aven Noncoding-Transcript-Variant
Rr562687 223 bp proximal
SNP G G G G
rs49688526
MGI SNP Detail
Alliance Variant
Chr2:112384815 Aven Intron
Aven Noncoding-Transcript-Variant
Rr562687 195 bp proximal
SNP A A A A
rs27491384
MGI SNP Detail
Alliance Variant
Chr2:112384937 Aven Intron
Aven Noncoding-Transcript-Variant
Rr562687 73 bp proximal
SNP A/G G G G G A G G G G G G G G G
rs226038709
MGI SNP Detail
Alliance Variant
Chr2:112384967 Aven Intron
Aven Noncoding-Transcript-Variant
Rr562687 43 bp proximal
SNP G/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T G T T T T
rs27491383
MGI SNP Detail
Alliance Variant
Chr2:112385095 Aven Intron
Aven Noncoding-Transcript-Variant
Rr562687 64 bp distal
SNP C/T C C C T C T C C C C C C C C C T
rs250986376
MGI SNP Detail
Alliance Variant
Chr2:112385164 Aven Intron
Aven Noncoding-Transcript-Variant
Rr562687 133 bp distal
SNP G/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T G T T T T
rs27491382
MGI SNP Detail
Alliance Variant
Chr2:112385232 Aven Intron
Aven Noncoding-Transcript-Variant
Rr562687 201 bp distal
SNP G/T G G G T G T G G G G G G G G G T
rs27491381
MGI SNP Detail
Alliance Variant
Chr2:112385293 Aven Intron
Aven Noncoding-Transcript-Variant
Rr562687 262 bp distal
SNP C/T C C C T C T C C C C C C C C C T
rs250189207
MGI SNP Detail
Alliance Variant
Chr2:112385313 Aven Intron
Aven Noncoding-Transcript-Variant
Rr562687 282 bp distal
SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs27491380
MGI SNP Detail
Alliance Variant
Chr2:112385338 Aven Intron
Aven Noncoding-Transcript-Variant
Rr562687 307 bp distal
SNP C/T C C C C C C C C C C C C C T C
SNP ID
(GRCm39)
Map Position
(GRCm39)
Gene & Category Variation
Type
Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
129X1/SvJ
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PL/J
PWD/PhJ
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs244469073
MGI SNP Detail
Alliance Variant
Chr2:112385344 Aven Intron
Aven Noncoding-Transcript-Variant
Rr562687 313 bp distal
SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs27491379
MGI SNP Detail
Alliance Variant
Chr2:112385358 Aven Intron
Aven Noncoding-Transcript-Variant
Rr562687 327 bp distal
SNP G/T T T T G T G G T T T T G T T G G
rs48803589
MGI SNP Detail
Alliance Variant
Chr2:112385404 Aven Intron
Aven Noncoding-Transcript-Variant
Rr562687 373 bp distal
SNP T T T T
rs27491378
MGI SNP Detail
Alliance Variant
Chr2:112385410 Aven Intron
Aven Noncoding-Transcript-Variant
Rr562687 379 bp distal
SNP G/T G G G T G T G G G G G G G G G T
rs259265752
MGI SNP Detail
Alliance Variant
Chr2:112385412 Aven Intron
Aven Noncoding-Transcript-Variant
Rr562687 381 bp distal
SNP G/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T G T T T T
rs228204380
MGI SNP Detail
Alliance Variant
Chr2:112385442 Aven Intron
Aven Noncoding-Transcript-Variant
Rr562687 411 bp distal
SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs245197699
MGI SNP Detail
Alliance Variant
Chr2:112385467 Aven Intron
Aven Noncoding-Transcript-Variant
Rr562687 436 bp distal
SNP G/T G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G T G G G G
rs27491377
MGI SNP Detail
Alliance Variant
Chr2:112385479 Aven Intron
Aven Noncoding-Transcript-Variant
Rr562687 448 bp distal
SNP A/G G G G A G A G G G G G G G G G A
rs27491376
MGI SNP Detail
Alliance Variant
Chr2:112385519 Aven Intron
Aven Noncoding-Transcript-Variant
Rr562687 488 bp distal
SNP A/G A A A A G A A A G A A G
rs582178862
MGI SNP Detail
Alliance Variant
Chr2:112385626 Aven Intron
Aven Noncoding-Transcript-Variant
Rr562687 595 bp distal
SNP C/T C C C C C C C C C C C C C C C C C C C C C C T C C C C C C C C C C C C C C C C C T C C C C C C C C C C C C
rs254165323
MGI SNP Detail
Alliance Variant
Chr2:112385633 Aven Intron
Aven Noncoding-Transcript-Variant
Rr562687 602 bp distal
SNP A/T A A A A A A A A A A T T A A A A A A A A A T T A A A A T A A A A A T A A A A A T T A A A A A A A A A A A A
rs217992060
MGI SNP Detail
Alliance Variant
Chr2:112385635 Aven Intron
Aven Noncoding-Transcript-Variant
Rr562687 604 bp distal
SNP A/G A A A A A A A A A A G G A A A A A A A A A G G A A A A G A A A A A G A A A A A G G A A A A A A A A A A A A
rs47915900
MGI SNP Detail
Alliance Variant
Chr2:112385652 Aven Intron
Aven Noncoding-Transcript-Variant
Rr562687 621 bp distal
SNP A A A A
rs27491375
MGI SNP Detail
Alliance Variant
Chr2:112385654 Aven Intron
Aven Noncoding-Transcript-Variant
Rr562687 623 bp distal
SNP A/G G G G A G A G G G G G G A
rs27491374
MGI SNP Detail
Alliance Variant
Chr2:112385682 Aven Intron
Aven Noncoding-Transcript-Variant
Rr562687 651 bp distal
SNP G/T T G G T G T T T T G
rs27491373
MGI SNP Detail
Alliance Variant
Chr2:112385698 Aven Intron
Aven Noncoding-Transcript-Variant
Rr562687 667 bp distal
SNP C/T T T C C T T T T T T C
rs47450225
MGI SNP Detail
Alliance Variant
Chr2:112385701 Aven Intron
Aven Noncoding-Transcript-Variant
Rr562687 670 bp distal
SNP T T T T
rs219698368
MGI SNP Detail
Alliance Variant
Chr2:112385880 Aven Intron
Aven Noncoding-Transcript-Variant
Rr562687 849 bp distal
SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs27491372
MGI SNP Detail
Alliance Variant
Chr2:112385881 Aven Intron
Aven Noncoding-Transcript-Variant
Rr562687 850 bp distal
SNP A/G A A A G A G A A A A A A A A A G
rs27491371
MGI SNP Detail
Alliance Variant
Chr2:112385908 Aven Intron
Aven Noncoding-Transcript-Variant
Rr562687 877 bp distal
SNP A/G G G G G A A G G G G A G G A A
rs226211004
MGI SNP Detail
Alliance Variant
Chr2:112385932 Aven Intron
Aven Noncoding-Transcript-Variant
Rr562687 901 bp distal
SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs242994396
MGI SNP Detail
Alliance Variant
Chr2:112385956 Aven Intron
Aven Noncoding-Transcript-Variant
Rr562687 925 bp distal
SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs27491370
MGI SNP Detail
Alliance Variant
Chr2:112385963 Aven Intron
Aven Noncoding-Transcript-Variant
Rr562687 932 bp distal
SNP A/G G G G G G A G G G G A G G A G
rs228267046
MGI SNP Detail
Alliance Variant
Chr2:112385991 Aven Intron
Aven Noncoding-Transcript-Variant
Rr562687 960 bp distal
SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs239072333
MGI SNP Detail
Alliance Variant
Chr2:112386014 Aven Intron
Aven Noncoding-Transcript-Variant
Rr562687 983 bp distal
SNP C/T T T T T T T T T T T T T T T T T T T T C T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T
SNP ID
(GRCm39)
Map Position
(GRCm39)
Gene & Category Variation
Type
Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
129X1/SvJ
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PL/J
PWD/PhJ
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs262881473
MGI SNP Detail
Alliance Variant
Chr2:112386073 Aven Intron
Aven Noncoding-Transcript-Variant
Rr562687 1042 bp distal
SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs51557771
MGI SNP Detail
Alliance Variant
Chr2:112386136 Aven Intron
Aven Noncoding-Transcript-Variant
Rr562687 1105 bp distal
SNP T T T T
rs585730749
MGI SNP Detail
Alliance Variant
Chr2:112386213 Aven Intron
Aven Noncoding-Transcript-Variant
Rr562687 1182 bp distal
SNP C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C
rs33587372
MGI SNP Detail
Alliance Variant
Chr2:112386384 Aven Intron
Aven Noncoding-Transcript-Variant
Rr562687 1353 bp distal
SNP A/G G G A G
rs32967271
MGI SNP Detail
Alliance Variant
Chr2:112386416 Aven Intron
Aven Noncoding-Transcript-Variant
Rr562687 1385 bp distal
SNP A/T T A T
rs27491368
MGI SNP Detail
Alliance Variant
Chr2:112386491 Aven Intron
Aven Noncoding-Transcript-Variant
Rr562687 1460 bp distal
SNP A/G G G G G G A G G G G A G G A G
rs578407380
MGI SNP Detail
Alliance Variant
Chr2:112386530 Aven Intron
Aven Noncoding-Transcript-Variant
Rr562687 1499 bp distal
SNP G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G
rs229228600
MGI SNP Detail
Alliance Variant
Chr2:112386538 Aven Intron
Aven Noncoding-Transcript-Variant
Rr562687 1507 bp distal
SNP A/G A A A A A A A A A A A A A A A A A A A G A A A A A A A A A A A A A A A A A A A G A
rs245274387
MGI SNP Detail
Alliance Variant
Chr2:112386548 Aven Intron
Aven Noncoding-Transcript-Variant
Rr562687 1517 bp distal
SNP A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A
rs27491367
MGI SNP Detail
Alliance Variant
Chr2:112386565 Aven Intron
Aven Noncoding-Transcript-Variant
Rr562687 1534 bp distal
SNP A/G G G G G G A G G G G A G G A G
rs27491366
MGI SNP Detail
Alliance Variant
Chr2:112386655 Aven Intron
Aven Noncoding-Transcript-Variant
Rr562687 1624 bp distal
SNP A/T T T T A T A T T T T T T T T T A
rs27491365
MGI SNP Detail
Alliance Variant
Chr2:112386688 Aven Intron
Aven Noncoding-Transcript-Variant
Rr562687 1657 bp distal
SNP A/G G G G G G A G G G G A G G G G
rs211841748
MGI SNP Detail
Alliance Variant
Chr2:112386709 Aven Intron
Aven Noncoding-Transcript-Variant
Rr562687 1678 bp distal
SNP A/C A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A C A A A A
rs236805600
MGI SNP Detail
Alliance Variant
Chr2:112386755 Aven Intron
Aven Noncoding-Transcript-Variant
Rr562687 1724 bp distal
SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs27491364
MGI SNP Detail
Alliance Variant
Chr2:112386769 Aven Intron
Aven Noncoding-Transcript-Variant
Rr562687 1738 bp distal
SNP C/T C C C T C T C T C C C C C C C C T
rs226812892
MGI SNP Detail
Alliance Variant
Chr2:112386790 Aven Intron
Aven Noncoding-Transcript-Variant
Rr562687 1759 bp distal
SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs236744501
MGI SNP Detail
Alliance Variant
Chr2:112386799 Aven Intron
Aven Noncoding-Transcript-Variant
Rr562687 1768 bp distal
SNP A/T A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A T A A A A
rs27491363
MGI SNP Detail
Alliance Variant
Chr2:112386876 Aven Intron
Aven Noncoding-Transcript-Variant
Rr562687 1845 bp distal
SNP C/T C C C C C T C C C C T C C T C
rs27491362
MGI SNP Detail
Alliance Variant
Chr2:112386964 Aven Intron
Aven Noncoding-Transcript-Variant
Rr562687 1933 bp distal
SNP A/G A A A G A G G G G A A G A A G G
rs239189552
MGI SNP Detail
Alliance Variant
Chr2:112386972 Aven Intron
Aven Noncoding-Transcript-Variant
Rr562687 1941 bp distal
SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs265321503
MGI SNP Detail
Alliance Variant
Chr2:112386976 Aven Intron
Aven Noncoding-Transcript-Variant
Rr562687 1945 bp distal
SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
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Showing SNP(s) 1 - 71 of 71

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
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last database update
03/18/2025
MGI 6.24
The Jackson Laboratory