About   Help   FAQ
Mouse SNP Summary
Symbol
Name
ID
Rr563272
regulatory region 563272
MGI:8025404

<< first < prev1 next > last >>
Showing SNP(s) 1 - 85 of 85

Your search exceeds the maximum result limit of 100,000 SNPs that can be displayed or exported to text. Use filters to refine your search or select a sub-region from the SNP Density Heatmap.
Loading...
Show only selected strains with alleles     Show all selected strains    
Drag columns to re-order.   Column order is reset with Filter or Show option change.
SNP ID
(GRCm39)
Map Position
(GRCm39)
Gene & Category Variation
Type
Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
129X1/SvJ
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PL/J
PWD/PhJ
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs3144711
MGI SNP Detail
Chr2:118414872 Rr563272 1663 bp proximal
SNP A/C C C A C A C
rs3144712
MGI SNP Detail
Chr2:118414885 Rr563272 1650 bp proximal
SNP C/T C C T C T C
rs224148410
MGI SNP Detail
Chr2:118414886 Rr563272 1649 bp proximal
SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs243615532
MGI SNP Detail
Chr2:118414946 Rr563272 1589 bp proximal
SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs3144713
MGI SNP Detail
Chr2:118415037 Rr563272 1498 bp proximal
SNP A/G A A G A G A
rs225824412
MGI SNP Detail
Chr2:118415057 Rr563272 1478 bp proximal
SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G G G G G G G G G
rs3144714
MGI SNP Detail
Chr2:118415060 Rr563272 1475 bp proximal
SNP C/T T T C T C T
rs216373571
MGI SNP Detail
Chr2:118415061 Rr563272 1474 bp proximal
SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs3144715
MGI SNP Detail
Chr2:118415100 Rr563272 1435 bp proximal
SNP G/T G G T G T G
rs3144716
MGI SNP Detail
Chr2:118415252 Rr563272 1283 bp proximal
SNP A/G A A G A G A
rs3144717
MGI SNP Detail
Chr2:118415274 Rr563272 1261 bp proximal
SNP A/T T A T A T
rs230316370
MGI SNP Detail
Chr2:118415296 Rr563272 1239 bp proximal
SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs3144718
MGI SNP Detail
Chr2:118415349 Rr563272 1186 bp proximal
SNP A/G G G G A G
rs219125171
MGI SNP Detail
Chr2:118415363 Rr563272 1172 bp proximal
SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs578564977
MGI SNP Detail
Chr2:118415455 Rr563272 1080 bp proximal
SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs3149938
MGI SNP Detail
Chr2:118415514 Rr563272 1021 bp proximal
SNP C C
rs247310736
MGI SNP Detail
Chr2:118415627 Rr563272 908 bp proximal
SNP A/G G G G G G G G G A G A A G G G G G G A G A G G G G G G G G G G G G G A G A A G G G G G G G G G G G G G A G
rs3149939
MGI SNP Detail
Chr2:118415739 Rr563272 796 bp proximal
SNP G/T T G T
rs224092158
MGI SNP Detail
Chr2:118415745 Rr563272 790 bp proximal
SNP A/C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C A C C C C
rs3149940
MGI SNP Detail
Chr2:118415761 Rr563272 774 bp proximal
SNP A/G G A G
rs257508767
MGI SNP Detail
Chr2:118415767 Rr563272 768 bp proximal
SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C C C C C C C C C
rs3144719
MGI SNP Detail
Chr2:118415820 Rr563272 715 bp proximal
SNP A/C C C A C
rs3144720
MGI SNP Detail
Chr2:118415879 Rr563272 656 bp proximal
SNP C/T C C T C
rs215940779
MGI SNP Detail
Chr2:118415913 Rr563272 622 bp proximal
SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T
rs52368555
MGI SNP Detail
Chr2:118415947 Rr563272 588 bp proximal
SNP A/G A A G A
SNP ID
(GRCm39)
Map Position
(GRCm39)
Gene & Category Variation
Type
Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
129X1/SvJ
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PL/J
PWD/PhJ
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs254209801
MGI SNP Detail
Chr2:118415973 Rr563272 562 bp proximal
SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs213199490
MGI SNP Detail
Chr2:118415977 Rr563272 558 bp proximal
SNP G/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T G T T T T
rs230232401
MGI SNP Detail
Chr2:118415997 Rr563272 538 bp proximal
SNP A/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T A T T T T
rs250880377
MGI SNP Detail
Chr2:118415998 Rr563272 537 bp proximal
SNP A/T A T T T A A A A A A T T T A A A T A A T T T A A T T
rs46944135
MGI SNP Detail
Chr2:118416081 Rr563272 454 bp proximal
SNP C/T C C T C
rs3149379
MGI SNP Detail
Chr2:118416109 Rr563272 426 bp proximal
SNP C/T C C T C
rs3144186
MGI SNP Detail
Chr2:118416130 Rr563272 405 bp proximal
SNP A/G A A G A
rs249894755
MGI SNP Detail
Chr2:118416211 Rr563272 324 bp proximal
SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs256034643
MGI SNP Detail
Chr2:118416228 Rr563272 307 bp proximal
SNP A/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T A T T T T
rs218083363
MGI SNP Detail
Chr2:118416230 Rr563272 305 bp proximal
SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs239581399
MGI SNP Detail
Chr2:118416235 Rr563272 300 bp proximal
SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs3149941
MGI SNP Detail
Chr2:118416273 Rr563272 262 bp proximal
SNP C/T T T T T T C C C C T T
rs228056622
MGI SNP Detail
Chr2:118416370 Rr563272 165 bp proximal
SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs3144185
MGI SNP Detail
Chr2:118416425 Rr563272 110 bp proximal
SNP G/T G G G G G T G T T T G G T G G
rs265516780
MGI SNP Detail
Chr2:118416476 Rr563272 59 bp proximal
SNP G/T G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G T G G G G
rs3149378
MGI SNP Detail
Chr2:118416477 Rr563272 58 bp proximal
SNP A/G G G G A G A G
rs27423908
MGI SNP Detail
Chr2:118416686 Rr563272 within coordinates of
SNP C/G C G G C C C C G
rs586250362
MGI SNP Detail
Chr2:118416773 Rr563272 within coordinates of
SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs578453266
MGI SNP Detail
Chr2:118416780 Rr563272 within coordinates of
SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs259415292
MGI SNP Detail
Chr2:118416804 Rr563272 within coordinates of
SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs3149942
MGI SNP Detail
Chr2:118416864 Rr563272 within coordinates of
SNP A/G A A A G G A
rs30831181
MGI SNP Detail
Chr2:118416970 Rr563272 98 bp distal
SNP C/G C C G G C
rs27423907
MGI SNP Detail
Chr2:118417027 Rr563272 155 bp distal
SNP C/T T T T C T C C C C T
rs214005316
MGI SNP Detail
Chr2:118417039 Rr563272 167 bp distal
SNP A/G G G G G G G G G G G G G G G G G G G G A G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G
rs241524869
MGI SNP Detail
Chr2:118417127 Rr563272 255 bp distal
SNP A/C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C A C C C C
SNP ID
(GRCm39)
Map Position
(GRCm39)
Gene & Category Variation
Type
Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
129X1/SvJ
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PL/J
PWD/PhJ
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs252671325
MGI SNP Detail
Chr2:118417154 Rr563272 282 bp distal
SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs218735430
MGI SNP Detail
Chr2:118417235 Rr563272 363 bp distal
SNP C/G C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C G C C C C
rs50164484
MGI SNP Detail
Chr2:118417332 Rr563272 460 bp distal
SNP A/T T T A T
rs250251545
MGI SNP Detail
Chr2:118417424 Rr563272 552 bp distal
SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs224970793
MGI SNP Detail
Chr2:118417560 Rr563272 688 bp distal
SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs247811071
MGI SNP Detail
Chr2:118417649 Rr563272 777 bp distal
SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs581846619
MGI SNP Detail
Chr2:118417760 Rr563272 888 bp distal
SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs264408247
MGI SNP Detail
Chr2:118417875 Rr563272 1003 bp distal
SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs3144721
MGI SNP Detail
Chr2:118417970 Rr563272 1098 bp distal
SNP A/C A A C C A
rs3149943
MGI SNP Detail
Chr2:118417996 Rr563272 1124 bp distal
SNP G/T G G T T G
rs254778772
MGI SNP Detail
Chr2:118418019 Rr563272 1147 bp distal
SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs223613823
MGI SNP Detail
Chr2:118418023 Rr563272 1151 bp distal
SNP A/G G G G G G G G G A G A A G G G G G G A G A G G G G G G G G G G G G G A G A A G G G G G G G G G G G G G A G
rs244815325
MGI SNP Detail
Chr2:118418101 Rr563272 1229 bp distal
SNP A/C A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A C A A A A
rs255732492
MGI SNP Detail
Chr2:118418205 Rr563272 1333 bp distal
SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs232620059
MGI SNP Detail
Chr2:118418207 Rr563272 1335 bp distal
SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs257786842
MGI SNP Detail
Chr2:118418224 Rr563272 1352 bp distal
SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs219751239
MGI SNP Detail
Chr2:118418333 Rr563272 1461 bp distal
SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs241699008
MGI SNP Detail
Chr2:118418350 Rr563272 1478 bp distal
SNP C/T C C C C C C C C T C T T C C C C C C T C T C C C C C C C C C C C C C T C T T C C C C C C C C C C C C C T C
rs243934337
MGI SNP Detail
Chr2:118418351 Rr563272 1479 bp distal
SNP C/G C C C C C C C C G C G G C C C C C C G C G C C C C C C C C C C C C C G C G G C C C C C C C C C C C C C G C
rs3149944
MGI SNP Detail
Chr2:118418429 Rr563272 1557 bp distal
SNP C/G G G G C G
rs232482627
MGI SNP Detail
Chr2:118418469 Rr563272 1597 bp distal
SNP C/G C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C G C C C C
rs250992722
MGI SNP Detail
Chr2:118418571 Rr563272 1699 bp distal
SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs225090160
MGI SNP Detail
Chr2:118418580 Rr563272 1708 bp distal
SNP C/T C C C C T C C C C C C C C C C C C C C C C T C C C T C C C C C C C C C C C C C C C T T C C C T C C T T C C
rs237744545
MGI SNP Detail
Chr2:118418618 Rr563272 1746 bp distal
SNP A/C A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A C A A A A
rs264231640
MGI SNP Detail
Chr2:118418631 Rr563272 1759 bp distal
SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
SNP ID
(GRCm39)
Map Position
(GRCm39)
Gene & Category Variation
Type
Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
129X1/SvJ
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PL/J
PWD/PhJ
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs3144722
MGI SNP Detail
Chr2:118418692 Rr563272 1820 bp distal
SNP A/G A A A G A G A
rs3144723
MGI SNP Detail
Chr2:118418736 Rr563272 1864 bp distal
SNP A/G A A A G A G A
rs254666159
MGI SNP Detail
Chr2:118418755 Rr563272 1883 bp distal
SNP G/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T G T T T T
rs218132980
MGI SNP Detail
Chr2:118418768 Rr563272 1896 bp distal
SNP G/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T G T T T T
rs3149945
MGI SNP Detail
Chr2:118418775 Rr563272 1903 bp distal
SNP C/T C C C T C
rs3149946
MGI SNP Detail
Chr2:118418795 Rr563272 1923 bp distal
SNP C/T T T T C T C T
rs3149947
MGI SNP Detail
Chr2:118418796 Rr563272 1924 bp distal
SNP C/T T T T C T C T
rs245572512
MGI SNP Detail
Chr2:118418802 Rr563272 1930 bp distal
SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs266245275
MGI SNP Detail
Chr2:118418826 Rr563272 1954 bp distal
SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs233429205
MGI SNP Detail
Chr2:118418852 Rr563272 1980 bp distal
SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
<< first < prev1 next > last >>
Showing SNP(s) 1 - 85 of 85

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
Citing These Resources
Funding Information
Warranty Disclaimer, Privacy Notice, Licensing, & Copyright
Send questions and comments to User Support.
last database update
03/18/2025
MGI 6.24
The Jackson Laboratory