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Mouse SNP Summary
Symbol
Name
ID 		Rr563374
regulatory region 563374
MGI:8025506

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Showing SNP(s) 1 - 34 of 34

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SNP ID
(GRCm39)		 Map Position
(GRCm39)		 Gene & Category Variation
Type		 Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
129X1/SvJ
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
MSM/Ms
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PL/J
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs250347041
MGI SNP Detail
Alliance Variant		 Chr2:118732091 Bahd1 Intron
Bahd1 mRNA-UTR
Cpgi12098 within coordinates of
Rr563370 within coordinates of
Rr563374 1415 bp proximal
Tssr19590 within coordinates of
 SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T
rs583236975
MGI SNP Detail
Alliance Variant		 Chr2:118732461 Bahd1 Intron
Cpgi12098 within coordinates of
Rr563370 within coordinates of
Rr563374 1045 bp proximal
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs218038519
MGI SNP Detail
Alliance Variant		 Chr2:118732468 Bahd1 Intron
Cpgi12098 within coordinates of
Rr563370 within coordinates of
Rr563374 1038 bp proximal
 SNP C/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G C G
rs239541338
MGI SNP Detail
Alliance Variant		 Chr2:118732724 Bahd1 Intron
Cpgi12098 within coordinates of
Rr563370 within coordinates of
Rr563374 782 bp proximal
 SNP C/G C C C G C C C C C G G G C C C C G C C C G G G C C C C C C C C G C C C C C C C C C C C C
rs215230316
MGI SNP Detail
Alliance Variant		 Chr2:118733170 Bahd1 Intron
Cpgi12098 within coordinates of
Rr563370 within coordinates of
Rr563374 336 bp proximal
 SNP C/T C T
rs225130653
MGI SNP Detail
Alliance Variant		 Chr2:118733173 Bahd1 Intron
Cpgi12098 within coordinates of
Rr563370 within coordinates of
Rr563374 333 bp proximal
 SNP C/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G C G G G G G G G G G G G G
rs246545586
MGI SNP Detail
Alliance Variant		 Chr2:118733640 Bahd1 Intron
Rr563370 within coordinates of
Rr563374 113 bp distal
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs33413366
MGI SNP Detail
Alliance Variant		 Chr2:118733712 Bahd1 Intron
Rr563370 within coordinates of
Rr563374 185 bp distal
 SNP A/T T T A A T
rs229421317
MGI SNP Detail
Alliance Variant		 Chr2:118733716 Bahd1 Intron
Rr563370 within coordinates of
Rr563374 189 bp distal
 SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs29575358
MGI SNP Detail
Alliance Variant		 Chr2:118733840 Bahd1 Intron
Rr563370 within coordinates of
Rr563374 313 bp distal
 SNP C/T C T C T C
rs29718663
MGI SNP Detail
Alliance Variant		 Chr2:118733877 Bahd1 Intron
Rr563370 within coordinates of
Rr563374 350 bp distal
 SNP C/G G C G C G
rs223734574
MGI SNP Detail
Alliance Variant		 Chr2:118733892 Bahd1 Intron
Rr563370 within coordinates of
Rr563374 365 bp distal
 SNP C/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G C G G G G
rs237034321
MGI SNP Detail
Alliance Variant		 Chr2:118733938 Bahd1 Intron
Rr563370 within coordinates of
Rr563374 411 bp distal
 SNP A/C A C
rs256560471
MGI SNP Detail
Alliance Variant		 Chr2:118733942 Bahd1 Intron
Rr563370 within coordinates of
Rr563374 415 bp distal
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs214286025
MGI SNP Detail
Alliance Variant		 Chr2:118733945 Bahd1 Intron
Rr563370 within coordinates of
Rr563374 418 bp distal
 SNP G/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T G T T T T
rs233534716
MGI SNP Detail
Alliance Variant		 Chr2:118733980 Bahd1 Intron
Rr563370 within coordinates of
Rr563374 453 bp distal
 SNP A/C A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A C A A A A
rs33247343
MGI SNP Detail
Alliance Variant		 Chr2:118733997 Bahd1 Intron
Rr563370 within coordinates of
Rr563374 470 bp distal
 SNP A/G G A G A G
rs217091415
MGI SNP Detail
Alliance Variant		 Chr2:118734000 Bahd1 Intron
Rr563370 within coordinates of
Rr563374 473 bp distal
 SNP A/C C C C C A C C C C C C C C C C C C C C C C A C C C A C C C C C C C C C C C C C C C A C C C C A C A A C C
rs235386192
MGI SNP Detail
Alliance Variant		 Chr2:118734091 Bahd1 Intron
Rr563370 within coordinates of
Rr563374 564 bp distal
 SNP A/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T A T T T T
rs244068355
MGI SNP Detail
Alliance Variant		 Chr2:118734272 Bahd1 Intron
Rr563374 745 bp distal
 SNP G/T G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G T G G G G
rs211778029
MGI SNP Detail
Alliance Variant		 Chr2:118734345 Bahd1 Intron
Rr563374 818 bp distal
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs33398682
MGI SNP Detail
Alliance Variant		 Chr2:118734457 Bahd1 Intron
Rr563374 930 bp distal
 SNP A/G G G A G A G
rs32903961
MGI SNP Detail
Alliance Variant		 Chr2:118734572 Bahd1 Intron
Rr563374 1045 bp distal
 SNP A/T A T A A T
rs51841079
MGI SNP Detail
Alliance Variant		 Chr2:118734688 Bahd1 Intron
Rr563374 1161 bp distal
 SNP C/T C T
rs50670819
MGI SNP Detail
Alliance Variant		 Chr2:118734699 Bahd1 Intron
Rr563374 1172 bp distal
 SNP C/T T C
SNP ID
(GRCm39)		 Map Position
(GRCm39)		 Gene & Category Variation
Type		 Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
129X1/SvJ
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
MSM/Ms
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PL/J
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs50050869
MGI SNP Detail
Alliance Variant		 Chr2:118734716 Bahd1 Intron
Rr563374 1189 bp distal
 SNP A/G G G A
rs46731762
MGI SNP Detail
Alliance Variant		 Chr2:118734786 Bahd1 Intron
Rr563374 1259 bp distal
 SNP C/T T T C
rs241036107
MGI SNP Detail
Alliance Variant		 Chr2:118734864 Bahd1 Intron
Rr563374 1337 bp distal
 SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs254681531
MGI SNP Detail
Alliance Variant		 Chr2:118735071 Bahd1 Intron
Rr563374 1544 bp distal
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs33764899
MGI SNP Detail
Alliance Variant		 Chr2:118735097 Bahd1 Intron
Rr563374 1570 bp distal
 SNP A/C C A C A A C
rs29555380
MGI SNP Detail
Alliance Variant		 Chr2:118735152 Bahd1 Intron
Rr563374 1625 bp distal
 SNP C/T C T C T T C
rs265175064
MGI SNP Detail
Alliance Variant		 Chr2:118735228 Bahd1 Intron
Rr563374 1701 bp distal
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs220144667
MGI SNP Detail
Alliance Variant		 Chr2:118735362 Bahd1 Intron
Rr563374 1835 bp distal
 SNP C/T C C C C C C C C C C T C C C C C C T C T C C C C C C C C C C C C C T C T T C C C C C C T C C C C C C C C
rs257602527
MGI SNP Detail
Alliance Variant		 Chr2:118735483 Bahd1 Intron
Rr563374 1956 bp distal
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G G G G G G G G G
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Showing SNP(s) 1 - 34 of 34
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
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Send questions and comments to User Support. 		last database update
03/25/2025
MGI 6.24 		The Jackson Laboratory