About   Help   FAQ
Mouse SNP Summary
Symbol
Name
ID 		Rr563447
regulatory region 563447
MGI:8025579

<< first < prev1 next > last >>
Showing SNP(s) 1 - 63 of 63

Your search exceeds the maximum result limit of 100,000 SNPs that can be displayed or exported to text. Use filters to refine your search or select a sub-region from the SNP Density Heatmap.
Loading...
Show only selected strains with alleles     Show all selected strains    
Drag columns to re-order.   Column order is reset with Filter or Show option change.
SNP ID
(GRCm39)		 Map Position
(GRCm39)		 Gene & Category Variation
Type		 Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
129X1/SvJ
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PL/J
PWD/PhJ
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs262432327
MGI SNP Detail		 Chr2:119065860 9130007G19Rik within coordinates of
Rr563447 1886 bp proximal
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs33365857
MGI SNP Detail		 Chr2:119065911 9130007G19Rik within coordinates of
Rr563447 1835 bp proximal
 SNP A/G A G G G
rs27438703
MGI SNP Detail		 Chr2:119065918 9130007G19Rik within coordinates of
Rr563447 1828 bp proximal
 SNP A/C C C A A A C C A A A A A C C A C
rs27438702
MGI SNP Detail		 Chr2:119066025 9130007G19Rik within coordinates of
Rr563447 1721 bp proximal
 SNP C/G C C G C G C C G G G C G G C C G C
rs223371625
MGI SNP Detail		 Chr2:119066035 9130007G19Rik within coordinates of
Rr563447 1711 bp proximal
 SNP A/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T A T T T T
rs27438701
MGI SNP Detail		 Chr2:119066117 9130007G19Rik within coordinates of
Rr563447 1629 bp proximal
 SNP A/G G A G A G G A A G A A G G A G
rs27438700
MGI SNP Detail		 Chr2:119066138 9130007G19Rik within coordinates of
Rr563447 1608 bp proximal
 SNP C/T C T C T C C T T C T T C C T C
rs229309577
MGI SNP Detail		 Chr2:119066139 9130007G19Rik within coordinates of
Rr563447 1607 bp proximal
 SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs241329249
MGI SNP Detail		 Chr2:119066144 9130007G19Rik within coordinates of
Rr563447 1602 bp proximal
 SNP A/T A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A T A A A A
rs265384313
MGI SNP Detail		 Chr2:119066193 9130007G19Rik within coordinates of
Rr563447 1553 bp proximal
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs225675767
MGI SNP Detail		 Chr2:119066303 9130007G19Rik within coordinates of
Rr563447 1443 bp proximal
 SNP C/G C C C C C C C C C C C C C C C C C C C G C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C
rs32945305
MGI SNP Detail		 Chr2:119066312 9130007G19Rik within coordinates of
Rr563447 1434 bp proximal
 SNP A/G G A G A G
rs215414899
MGI SNP Detail		 Chr2:119066463 9130007G19Rik within coordinates of
Rr563447 1283 bp proximal
 SNP G/T T T T G T G G G T T T T G G G G G G T G T T G G G T G G G T G T G G T G T T T G G T T G T G T G G T T T T
rs229480470
MGI SNP Detail		 Chr2:119066501 9130007G19Rik within coordinates of
Rr563447 1245 bp proximal
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs235839098
MGI SNP Detail		 Chr2:119066560 9130007G19Rik within coordinates of
Rr563447 1186 bp proximal
 SNP A/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T A T T T T
rs257568139
MGI SNP Detail		 Chr2:119066596 9130007G19Rik within coordinates of
Rr563447 1150 bp proximal
 SNP C/T C C C T C T T T C C C C T T T T T T C T C C T T T C T T T C T C T C C T C C C T T C C T C T C T C C C C C
rs29773669
MGI SNP Detail		 Chr2:119066695 9130007G19Rik within coordinates of
Rr563447 1051 bp proximal
 SNP A/G G A G A
rs33526284
MGI SNP Detail		 Chr2:119066707 9130007G19Rik within coordinates of
Rr563447 1039 bp proximal
 SNP A/G G A G A
rs252813031
MGI SNP Detail		 Chr2:119066711 9130007G19Rik within coordinates of
Rr563447 1035 bp proximal
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs223355477
MGI SNP Detail		 Chr2:119066748 9130007G19Rik within coordinates of
Rr563447 998 bp proximal
 SNP A/G G G G G G G G G G G G G G G G G G G G A G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G
rs27438699
MGI SNP Detail		 Chr2:119066989 9130007G19Rik within coordinates of
Rr563447 757 bp proximal
 SNP C/T C C C C T C C T T C C C T C C
rs27438698
MGI SNP Detail		 Chr2:119066998 9130007G19Rik within coordinates of
Rr563447 748 bp proximal
 SNP C/T T T T T T T C T T C C T T T T
rs27438697
MGI SNP Detail		 Chr2:119067156 9130007G19Rik within coordinates of
Rr563445 within coordinates of
Rr563447 590 bp proximal
 SNP A/G G G G G G G G A G G A A G G G A G G
rs27438696
MGI SNP Detail		 Chr2:119067199 9130007G19Rik within coordinates of
Rr563445 within coordinates of
Rr563447 547 bp proximal
 SNP A/C C C C C C C C C C C C C C A C
rs27438695
MGI SNP Detail		 Chr2:119067290 9130007G19Rik within coordinates of
Cpgi12109 within coordinates of
Rr563445 within coordinates of
Rr563447 456 bp proximal
 SNP C/T C C C C C C C C C C C C C T
SNP ID
(GRCm39)		 Map Position
(GRCm39)		 Gene & Category Variation
Type		 Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
129X1/SvJ
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PL/J
PWD/PhJ
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs27438694
MGI SNP Detail		 Chr2:119067303 9130007G19Rik within coordinates of
Cpgi12109 within coordinates of
Rr563445 within coordinates of
Rr563447 443 bp proximal
 SNP C/T C C T C T C C C C T C C C C C C C T C
rs240365829
MGI SNP Detail		 Chr2:119067343 9130007G19Rik within coordinates of
Cpgi12109 within coordinates of
Rr563445 within coordinates of
Rr563447 403 bp proximal
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs33526466
MGI SNP Detail		 Chr2:119067482 9130007G19Rik within coordinates of
Cpgi12109 within coordinates of
Rr563445 within coordinates of
Rr563447 264 bp proximal
 SNP C/T T C C C
rs229465016
MGI SNP Detail		 Chr2:119067601 9130007G19Rik within coordinates of
Cpgi12109 within coordinates of
Rr563445 within coordinates of
Rr563447 145 bp proximal
 SNP A/G G G G G G G G G G G G G G G G G G G G A G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G
rs27438693
MGI SNP Detail		 Chr2:119067624 9130007G19Rik within coordinates of
Cpgi12109 within coordinates of
Rr563445 within coordinates of
Rr563447 122 bp proximal
 SNP C/G G G G G G G G C G G C C G G C G G
rs27438692
MGI SNP Detail		 Chr2:119067681 9130007G19Rik within coordinates of
Cpgi12109 within coordinates of
Rr563445 within coordinates of
Rr563447 65 bp proximal
 SNP C/T T C T C T T C C T C C T T C T
rs227381142
MGI SNP Detail		 Chr2:119067694 9130007G19Rik within coordinates of
Cpgi12109 within coordinates of
Rr563445 within coordinates of
Rr563447 52 bp proximal
Tssr19609 within coordinates of
 SNP C/G C C C C C C C C C C C C C C C C C C C G C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C
rs45986403
MGI SNP Detail		 Chr2:119067776 Cpgi12109 within coordinates of
Rr563447 within coordinates of
 SNP A/G G A G
rs27438691
MGI SNP Detail
Alliance Variant		 Chr2:119067889 Cpgi12109 within coordinates of
Rr563447 within coordinates of
Spint1 mRNA-UTR
Tssr19611 within coordinates of
 SNP C/T C C C C C C C T T C C C T C C
rs234452123
MGI SNP Detail
Alliance Variant		 Chr2:119068093 Cpgi12109 within coordinates of
Rr563447 49 bp distal
Spint1 Intron
Spint1 mRNA-UTR
 SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs252795341
MGI SNP Detail
Alliance Variant		 Chr2:119068097 Cpgi12109 within coordinates of
Rr563447 53 bp distal
Spint1 Intron
Spint1 mRNA-UTR
 SNP C/T C C C T C T T T C C C C T T T T T T C T C C T T T C T T T C T C T T C T C C C T T C C T C T C T T C C C C
rs587373091
MGI SNP Detail
Alliance Variant		 Chr2:119068248 Cpgi12109 within coordinates of
Rr563447 204 bp distal
Spint1 mRNA-UTR
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs241907372
MGI SNP Detail
Alliance Variant		 Chr2:119068309 Cpgi12109 within coordinates of
Rr563447 265 bp distal
Spint1 Coding-Synonymous
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs256119108
MGI SNP Detail
Alliance Variant		 Chr2:119068312 Cpgi12109 within coordinates of
Rr563447 268 bp distal
Spint1 Coding-Synonymous
 SNP C/G C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C G C C C C
rs219964095
MGI SNP Detail
Alliance Variant		 Chr2:119068365 Cpgi12109 within coordinates of
Rr563447 321 bp distal
Spint1 Coding-NonSynonymous
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs241367855
MGI SNP Detail
Alliance Variant		 Chr2:119068366 Cpgi12109 within coordinates of
Rr563447 322 bp distal
Spint1 Coding-Synonymous
 SNP C/G C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C G C C C C
rs27438689
MGI SNP Detail
Alliance Variant		 Chr2:119068510 Cpgi12109 within coordinates of
Rr563447 466 bp distal
Spint1 Coding-Synonymous
 SNP C/T C C C C C C C C T C C C C
rs250653271
MGI SNP Detail
Alliance Variant		 Chr2:119068549 Cpgi12109 within coordinates of
Rr563447 505 bp distal
Spint1 Coding-Synonymous
 SNP C/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G C G G G G
rs13462799
MGI SNP Detail
Alliance Variant		 Chr2:119068675 Cpgi12109 within coordinates of
Rr563447 631 bp distal
Spint1 Coding-Synonymous
 SNP C/T C C C C C C T C C T T C C C C C C
rs240144171
MGI SNP Detail
Alliance Variant		 Chr2:119068744 Cpgi12109 within coordinates of
Rr563447 700 bp distal
Spint1 Intron
 SNP A/T A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A T A A A A
rs27438688
MGI SNP Detail
Alliance Variant		 Chr2:119068813 Rr563447 769 bp distal
Spint1 Intron
 SNP A/G G G G G G G G A G G A A G G G G G G
rs223113520
MGI SNP Detail
Alliance Variant		 Chr2:119068816 Rr563447 772 bp distal
Spint1 Intron
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs250673914
MGI SNP Detail
Alliance Variant		 Chr2:119068910 Rr563447 866 bp distal
Spint1 Intron
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs27438687
MGI SNP Detail
Alliance Variant		 Chr2:119068952 Rr563447 908 bp distal
Spint1 Intron
 SNP A/T T T T T T T T T T A T T T T
rs27438686
MGI SNP Detail
Alliance Variant		 Chr2:119068975 Rr563447 931 bp distal
Spint1 Intron
 SNP C/T T T T T T T T C T T T C C C T T C T T
SNP ID
(GRCm39)		 Map Position
(GRCm39)		 Gene & Category Variation
Type		 Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
129X1/SvJ
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PL/J
PWD/PhJ
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs228630796
MGI SNP Detail
Alliance Variant		 Chr2:119069062 Rr563447 1018 bp distal
Spint1 Intron
 SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs251244843
MGI SNP Detail
Alliance Variant		 Chr2:119069076 Rr563447 1032 bp distal
Spint1 Intron
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs27438685
MGI SNP Detail
Alliance Variant		 Chr2:119069212 Rr563447 1168 bp distal
Spint1 Intron
 SNP C/T T T T T T T T T T C T T T T
rs27438684
MGI SNP Detail
Alliance Variant		 Chr2:119069391 Rr563447 1347 bp distal
Spint1 Intron
 SNP A/G G G G G G G G G G A G G G G
rs27438683
MGI SNP Detail
Alliance Variant		 Chr2:119069596 Rr563447 1552 bp distal
Spint1 Intron
 SNP A/G G G G G G G A G G A A G G G G G G
rs27438682
MGI SNP Detail
Alliance Variant		 Chr2:119069660 Rr563447 1616 bp distal
Spint1 Intron
 SNP C/T T T T T T T C T T C C C T T C T T
rs246185897
MGI SNP Detail
Alliance Variant		 Chr2:119069704 Rr563447 1660 bp distal
Spint1 Intron
 SNP A/C A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A C A A A A
rs217119095
MGI SNP Detail
Alliance Variant		 Chr2:119069778 Rr563447 1734 bp distal
Spint1 Intron
 SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs579623773
MGI SNP Detail
Alliance Variant		 Chr2:119069858 Rr563447 1814 bp distal
Spint1 Intron
 SNP G/T G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G T G G G G
rs239432569
MGI SNP Detail
Alliance Variant		 Chr2:119069909 Rr563447 1865 bp distal
Rr563451 within coordinates of
Spint1 Intron
 SNP A/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T A T T T T
rs254186638
MGI SNP Detail
Alliance Variant		 Chr2:119069910 Rr563447 1866 bp distal
Rr563451 within coordinates of
Spint1 Intron
 SNP A/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T A T T T T
rs27438681
MGI SNP Detail
Alliance Variant		 Chr2:119069937 Rr563447 1893 bp distal
Rr563451 within coordinates of
Spint1 Intron
 SNP A/G A A A A A A A A A A G G A A A G A A
rs27438680
MGI SNP Detail
Alliance Variant		 Chr2:119069995 Rr563447 1951 bp distal
Rr563451 within coordinates of
Spint1 Intron
 SNP A/G G G G G G G G G G G A G G G G
<< first < prev1 next > last >>
Showing SNP(s) 1 - 63 of 63
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
Citing These Resources
Funding Information
Warranty Disclaimer, Privacy Notice, Licensing, & Copyright
Send questions and comments to User Support. 		last database update
03/25/2025
MGI 6.24 		The Jackson Laboratory
Building initial tooltip...