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Mouse SNP Summary
Symbol
Name
ID 		Rr563553
regulatory region 563553
MGI:8025685

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SNP ID
(GRCm39)		 Map Position
(GRCm39)		 Gene & Category Variation
Type		 Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
129X1/SvJ
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
MSM/Ms
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PL/J
PWD/PhJ
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs33266311
MGI SNP Detail
Alliance Variant		 Chr2:119448462 Cpgi12123 within coordinates of
Oip5 Intron
Rr563550 within coordinates of
Rr563553 1981 bp proximal
 SNP A/C A A A C A C A
rs260824618
MGI SNP Detail
Alliance Variant		 Chr2:119448514 Cpgi12123 within coordinates of
Oip5 Intron
Rr563550 within coordinates of
Rr563553 1929 bp proximal
 SNP A/G G G G G G G G G G G A A G G G G G G A G A G G G G G G G A G G G G G A G A A G G G G G G A G A G G G G G G
rs585656140
MGI SNP Detail
Alliance Variant		 Chr2:119448554 Cpgi12123 within coordinates of
Oip5 Intron
Rr563550 within coordinates of
Rr563553 1889 bp proximal
 SNP C/G C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C G C C C C
rs29880782
MGI SNP Detail
Alliance Variant		 Chr2:119448586 Cpgi12123 within coordinates of
Oip5 Intron
Rr563550 within coordinates of
Rr563553 1857 bp proximal
 SNP C/T C C T C T C
rs235708015
MGI SNP Detail
Alliance Variant		 Chr2:119448621 Cpgi12123 within coordinates of
Oip5 Intron
Rr563550 within coordinates of
Rr563553 1822 bp proximal
 SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs29858571
MGI SNP Detail
Alliance Variant		 Chr2:119448733 Cpgi12123 within coordinates of
Oip5 Coding-Synonymous
Rr563550 within coordinates of
Rr563553 1710 bp proximal
 SNP A/G A G G G
rs33563936
MGI SNP Detail
Alliance Variant		 Chr2:119448809 Cpgi12123 within coordinates of
Nusap1 mRNA-UTR
Oip5 Coding-NonSynonymous
Rr563553 1634 bp proximal
 SNP A/C C A C A C A
rs239749708
MGI SNP Detail
Alliance Variant		 Chr2:119448891 Cpgi12123 within coordinates of
Nusap1 mRNA-UTR
Oip5 Coding-NonSynonymous
Rr563553 1552 bp proximal
 SNP C/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G C G G G G
rs33757472
MGI SNP Detail
Alliance Variant		 Chr2:119448893 Cpgi12123 within coordinates of
Nusap1 mRNA-UTR
Oip5 Coding-NonSynonymous
Rr563553 1550 bp proximal
 SNP C/T T T C T C T
rs225379316
MGI SNP Detail
Alliance Variant		 Chr2:119448982 Cpgi12123 within coordinates of
Nusap1 mRNA-UTR
Oip5 mRNA-UTR
Rr397233 within coordinates of
Rr563552 within coordinates of
Rr563553 1461 bp proximal
Tssr25824 within coordinates of
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs33528719
MGI SNP Detail
Alliance Variant		 Chr2:119449178 Cpgi12123 within coordinates of
Nusap1 mRNA-UTR
Nusap1 Noncoding-Transcript-Variant
Rr397233 within coordinates of
Rr563552 within coordinates of
Rr563553 1265 bp proximal
 SNP A/C A A C A C A
rs27440510
MGI SNP Detail
Alliance Variant		 Chr2:119449217 Cpgi12123 within coordinates of
Nusap1 mRNA-UTR
Nusap1 Noncoding-Transcript-Variant
Rr397233 within coordinates of
Rr563553 1226 bp proximal
Tssr19645 within coordinates of
 SNP A/G G G G G G A G G G A G A G G G
rs32936603
MGI SNP Detail
Alliance Variant		 Chr2:119449243 Cpgi12123 within coordinates of
Nusap1 mRNA-UTR
Nusap1 Noncoding-Transcript-Variant
Rr563553 1200 bp proximal
 SNP G/T G G T G T G
rs27440509
MGI SNP Detail
Alliance Variant		 Chr2:119449292 Cpgi12123 within coordinates of
Nusap1 Coding-Synonymous
Nusap1 mRNA-UTR
Nusap1 Noncoding-Transcript-Variant
Rr563553 1151 bp proximal
 SNP C/T T T T T T T T T T T T C C T T C T T
rs27440508
MGI SNP Detail
Alliance Variant		 Chr2:119449319 Cpgi12123 within coordinates of
Nusap1 Coding-Synonymous
Nusap1 mRNA-UTR
Nusap1 Noncoding-Transcript-Variant
Rr563553 1124 bp proximal
 SNP C/T C C C C C C C C C C T T C C C C C
rs243554626
MGI SNP Detail
Alliance Variant		 Chr2:119449446 Nusap1 Intron
Nusap1 Noncoding-Transcript-Variant
Rr563553 997 bp proximal
 SNP C/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G C G G G G
rs216775033
MGI SNP Detail
Alliance Variant		 Chr2:119449561 Nusap1 Intron
Nusap1 Noncoding-Transcript-Variant
Rr563553 882 bp proximal
 SNP A/C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C A C C C C
rs52439956
MGI SNP Detail
Alliance Variant		 Chr2:119449564 Nusap1 Intron
Nusap1 Noncoding-Transcript-Variant
Rr563553 879 bp proximal
 SNP G/T T T G G T
rs260114739
MGI SNP Detail
Alliance Variant		 Chr2:119449578 Nusap1 Intron
Nusap1 Noncoding-Transcript-Variant
Rr563553 865 bp proximal
 SNP A/T T T T T T T T T T T A A T T T T T T A T A T T T T T T T A T T T T T A T A A T T T T T T A T T T T T T T T
rs50171573
MGI SNP Detail
Alliance Variant		 Chr2:119449579 Nusap1 Intron
Nusap1 Noncoding-Transcript-Variant
Rr563553 864 bp proximal
 SNP A/T A A T T A
rs582653444
MGI SNP Detail
Alliance Variant		 Chr2:119449672 Nusap1 Intron
Nusap1 Noncoding-Transcript-Variant
Rr563553 771 bp proximal
 SNP G/T G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G T G G G G
rs586088048
MGI SNP Detail
Alliance Variant		 Chr2:119449798 Nusap1 Intron
Nusap1 Noncoding-Transcript-Variant
Rr563553 645 bp proximal
 SNP A/G G G G G G G G G G G A A G G G G G G A G A G G G G G G G A G G G G G A G A A G G G G G G A G G G G G G G G
rs27440507
MGI SNP Detail
Alliance Variant		 Chr2:119449815 Nusap1 Intron
Nusap1 Noncoding-Transcript-Variant
Rr563553 628 bp proximal
 SNP C/T C C C C T T C T C
rs230441641
MGI SNP Detail
Alliance Variant		 Chr2:119449833 Nusap1 Intron
Nusap1 Noncoding-Transcript-Variant
Rr563553 610 bp proximal
 SNP A/G A A A G A G G G A A G G G G G G G G G G G A G G G A G G G G G A A G G G G G G G G A A G G G A G G A A G A
rs33741488
MGI SNP Detail
Alliance Variant		 Chr2:119449965 Nusap1 Intron
Nusap1 Noncoding-Transcript-Variant
Rr563553 478 bp proximal
 SNP A/G A G A G G A
SNP ID
(GRCm39)		 Map Position
(GRCm39)		 Gene & Category Variation
Type		 Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
129X1/SvJ
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
MSM/Ms
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PL/J
PWD/PhJ
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs218350685
MGI SNP Detail
Alliance Variant		 Chr2:119449979 Nusap1 Intron
Nusap1 Noncoding-Transcript-Variant
Rr563553 464 bp proximal
 SNP G/T G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G T G G G G
rs233066312
MGI SNP Detail
Alliance Variant		 Chr2:119450011 Nusap1 Intron
Nusap1 Noncoding-Transcript-Variant
Rr563553 432 bp proximal
 SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs257182309
MGI SNP Detail
Alliance Variant		 Chr2:119450051 Nusap1 Intron
Nusap1 Noncoding-Transcript-Variant
Rr563553 392 bp proximal
 SNP A/T A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A T A A A A
rs27440506
MGI SNP Detail
Alliance Variant		 Chr2:119450280 Nusap1 Intron
Nusap1 Noncoding-Transcript-Variant
Rr563553 163 bp proximal
 SNP C/G G G G G G G G C G G G G C C G G C G G
rs27440505
MGI SNP Detail
Alliance Variant		 Chr2:119450315 Nusap1 Intron
Nusap1 Noncoding-Transcript-Variant
Rr563553 128 bp proximal
 SNP C/T C C C C C C C C C C C C C C T
rs27440504
MGI SNP Detail
Alliance Variant		 Chr2:119450365 Nusap1 Intron
Nusap1 Noncoding-Transcript-Variant
Rr563553 78 bp proximal
 SNP C/T T T T T T T C T T C C T T C T
rs29872828
MGI SNP Detail
Alliance Variant		 Chr2:119450377 Nusap1 Intron
Nusap1 Noncoding-Transcript-Variant
Rr563553 66 bp proximal
 SNP A/C A A C A
rs32827219
MGI SNP Detail
Alliance Variant		 Chr2:119450391 Nusap1 Intron
Nusap1 Noncoding-Transcript-Variant
Rr563553 52 bp proximal
 SNP C/T T T C T
rs222187490
MGI SNP Detail
Alliance Variant		 Chr2:119450514 Nusap1 Intron
Nusap1 Noncoding-Transcript-Variant
Rr563553 within coordinates of
 SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs236930926
MGI SNP Detail
Alliance Variant		 Chr2:119450578 Nusap1 Intron
Nusap1 Noncoding-Transcript-Variant
Rr563553 within coordinates of
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs254139924
MGI SNP Detail
Alliance Variant		 Chr2:119450721 Nusap1 Intron
Nusap1 Noncoding-Transcript-Variant
Rr563553 within coordinates of
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs225907974
MGI SNP Detail
Alliance Variant		 Chr2:119450788 Nusap1 Intron
Nusap1 Noncoding-Transcript-Variant
Rr563553 within coordinates of
 SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A A A A A A A A A
rs237258636
MGI SNP Detail
Alliance Variant		 Chr2:119450821 Nusap1 Intron
Nusap1 Noncoding-Transcript-Variant
Rr563553 within coordinates of
 SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs27440503
MGI SNP Detail
Alliance Variant		 Chr2:119450913 Nusap1 Intron
Nusap1 Noncoding-Transcript-Variant
Rr563553 within coordinates of
 SNP C/T T T T T C T C C T T
rs33106881
MGI SNP Detail
Alliance Variant		 Chr2:119450934 Nusap1 Intron
Nusap1 Noncoding-Transcript-Variant
Rr563553 within coordinates of
 SNP A/G A A G A G A
rs254695130
MGI SNP Detail
Alliance Variant		 Chr2:119450958 Nusap1 Intron
Nusap1 Noncoding-Transcript-Variant
Rr563553 within coordinates of
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs29913095
MGI SNP Detail
Alliance Variant		 Chr2:119451020 Nusap1 Intron
Nusap1 Noncoding-Transcript-Variant
Rr563553 within coordinates of
 SNP A/G G G A G A G
rs224948078
MGI SNP Detail
Alliance Variant		 Chr2:119451149 Nusap1 Intron
Nusap1 Noncoding-Transcript-Variant
Rr563553 26 bp distal
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs243457183
MGI SNP Detail
Alliance Variant		 Chr2:119451169 Nusap1 Intron
Nusap1 Noncoding-Transcript-Variant
Rr563553 46 bp distal
 SNP G/T G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G T G G G G G G G G G G G G
rs240001374
MGI SNP Detail
Alliance Variant		 Chr2:119451554 Nusap1 Intron
Nusap1 Noncoding-Transcript-Variant
Rr563553 431 bp distal
 SNP A/C C C C C C A C C C C C C A A A A A A C C C C A C C C C A C C A C C A C C C C C C A C C C C C C C A C C C C
rs261182593
MGI SNP Detail
Alliance Variant		 Chr2:119451555 Nusap1 Intron
Nusap1 Noncoding-Transcript-Variant
Rr563553 432 bp distal
 SNP A/G G G G G G G G G G G A A G G G G G G A G A G G G G G G G A G G G G G A G A A G G G G G G A G G G G G G G G
rs222325275
MGI SNP Detail
Alliance Variant		 Chr2:119451559 Nusap1 Intron
Nusap1 Noncoding-Transcript-Variant
Rr563553 436 bp distal
 SNP C/G G G G G G C G G G G G G C C C C C C G G G G C G G G G C G G C G G C G G G G G G G G G G G G G G G G G G G
rs237071120
MGI SNP Detail
Alliance Variant		 Chr2:119451561 Nusap1 Intron
Nusap1 Noncoding-Transcript-Variant
Rr563553 438 bp distal
 SNP G/T G G G G G T G G G G G G T T T T T T G G G G T G G G G T G T G G T G G G G G G T G G G G G G G G G G G G
rs254276964
MGI SNP Detail
Alliance Variant		 Chr2:119451679 Nusap1 Intron
Nusap1 Noncoding-Transcript-Variant
Rr563553 556 bp distal
 SNP A/G G A
rs580608642
MGI SNP Detail
Alliance Variant		 Chr2:119451753 Nusap1 Intron
Nusap1 Noncoding-Transcript-Variant
Rr563553 630 bp distal
 SNP C/T C C C C C C C C C C C C C C C C C C C T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C
SNP ID
(GRCm39)		 Map Position
(GRCm39)		 Gene & Category Variation
Type		 Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
129X1/SvJ
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
MSM/Ms
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PL/J
PWD/PhJ
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs220261822
MGI SNP Detail
Alliance Variant		 Chr2:119451812 Nusap1 Intron
Nusap1 Noncoding-Transcript-Variant
Rr563553 689 bp distal
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs242882720
MGI SNP Detail
Alliance Variant		 Chr2:119451856 Nusap1 Intron
Nusap1 Noncoding-Transcript-Variant
Rr563553 733 bp distal
 SNP G/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T G T T T T
rs27440502
MGI SNP Detail
Alliance Variant		 Chr2:119451863 Nusap1 Intron
Nusap1 Noncoding-Transcript-Variant
Rr563553 740 bp distal
 SNP C/T T T T T T T T T T T C C T T T T
rs231367674
MGI SNP Detail
Alliance Variant		 Chr2:119451864 Nusap1 Intron
Nusap1 Noncoding-Transcript-Variant
Rr563553 741 bp distal
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G G G G G G G G G
rs250813678
MGI SNP Detail
Alliance Variant		 Chr2:119451905 Nusap1 Intron
Nusap1 Noncoding-Transcript-Variant
Rr563553 782 bp distal
 SNP G/T G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G T G G G G
rs27440501
MGI SNP Detail
Alliance Variant		 Chr2:119452007 Nusap1 Intron
Nusap1 Noncoding-Transcript-Variant
Rr563553 884 bp distal
 SNP C/G G G G G G G G C G G G G C C G G C G G
rs33372632
MGI SNP Detail
Alliance Variant		 Chr2:119452045 Nusap1 Intron
Nusap1 Noncoding-Transcript-Variant
Rr563553 922 bp distal
 SNP C/T C T T C
rs243490356
MGI SNP Detail
Alliance Variant		 Chr2:119452106 Nusap1 Intron
Nusap1 Noncoding-Transcript-Variant
Rr563553 983 bp distal
 SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs29727391
MGI SNP Detail
Alliance Variant		 Chr2:119452137 Nusap1 Intron
Nusap1 Noncoding-Transcript-Variant
Rr563553 1014 bp distal
 SNP G/T T G G
rs225605925
MGI SNP Detail
Alliance Variant		 Chr2:119452156 Nusap1 Intron
Nusap1 Noncoding-Transcript-Variant
Rr563553 1033 bp distal
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs250879616
MGI SNP Detail
Alliance Variant		 Chr2:119452191 Nusap1 Intron
Nusap1 Noncoding-Transcript-Variant
Rr563553 1068 bp distal
 SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs217333486
MGI SNP Detail
Alliance Variant		 Chr2:119452204 Nusap1 Intron
Nusap1 Noncoding-Transcript-Variant
Rr563553 1081 bp distal
 SNP G/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T G T T T T T T T T T T T T
rs583944292
MGI SNP Detail
Alliance Variant		 Chr2:119452265 Nusap1 Intron
Nusap1 Noncoding-Transcript-Variant
Rr563553 1142 bp distal
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs27440500
MGI SNP Detail
Alliance Variant		 Chr2:119452268 Nusap1 Intron
Nusap1 Noncoding-Transcript-Variant
Rr563553 1145 bp distal
 SNP A/G A A A A A A A G A A A A G G A A G A A
rs264287108
MGI SNP Detail
Alliance Variant		 Chr2:119452307 Nusap1 Intron
Nusap1 Noncoding-Transcript-Variant
Rr563553 1184 bp distal
 SNP G/T G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G T G G G G
rs27440499
MGI SNP Detail
Alliance Variant		 Chr2:119452321 Nusap1 Intron
Nusap1 Noncoding-Transcript-Variant
Rr563553 1198 bp distal
 SNP C/G G G G G G G C G G G G G G G G
rs33508601
MGI SNP Detail
Alliance Variant		 Chr2:119452352 Nusap1 Intron
Nusap1 Noncoding-Transcript-Variant
Rr563553 1229 bp distal
 SNP C/G C C G C G C
rs586271745
MGI SNP Detail
Alliance Variant		 Chr2:119452366 Nusap1 Intron
Nusap1 Noncoding-Transcript-Variant
Rr563553 1243 bp distal
 SNP C/T C C C C C C C C C C C C C C C C C C C T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C
rs27440498
MGI SNP Detail
Alliance Variant		 Chr2:119452374 Nusap1 Intron
Nusap1 Noncoding-Transcript-Variant
Rr563553 1251 bp distal
 SNP A/G A G G G A G G G G G G G G G G
rs27440497
MGI SNP Detail
Alliance Variant		 Chr2:119452428 Nusap1 Intron
Nusap1 Noncoding-Transcript-Variant
Rr563553 1305 bp distal
 SNP A/G A A A A A A A A A A A A A G A
rs33644330
MGI SNP Detail
Alliance Variant		 Chr2:119452464 Nusap1 Intron
Nusap1 Noncoding-Transcript-Variant
Rr563553 1341 bp distal
 SNP A/G G G A G A G
rs33048323
MGI SNP Detail
Alliance Variant		 Chr2:119452490 Nusap1 Intron
Nusap1 Noncoding-Transcript-Variant
Rr563553 1367 bp distal
 SNP A/G G G A G A G
rs246236056
MGI SNP Detail
Alliance Variant		 Chr2:119452684 Nusap1 Intron
Nusap1 Noncoding-Transcript-Variant
Rr563553 1561 bp distal
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C C C C C C C C C
rs259730570
MGI SNP Detail
Alliance Variant		 Chr2:119452714 Nusap1 Intron
Nusap1 Noncoding-Transcript-Variant
Rr563553 1591 bp distal
 SNP A/T A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A T A A A A
rs33368680
MGI SNP Detail
Alliance Variant		 Chr2:119452715 Nusap1 Intron
Nusap1 Noncoding-Transcript-Variant
Rr563553 1592 bp distal
 SNP A/T T T A T A T
SNP ID
(GRCm39)		 Map Position
(GRCm39)		 Gene & Category Variation
Type		 Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
129X1/SvJ
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
MSM/Ms
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PL/J
PWD/PhJ
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs248113634
MGI SNP Detail
Alliance Variant		 Chr2:119452777 Nusap1 Intron
Nusap1 Noncoding-Transcript-Variant
Rr563553 1654 bp distal
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs218550159
MGI SNP Detail
Alliance Variant		 Chr2:119452843 Nusap1 Intron
Nusap1 Noncoding-Transcript-Variant
Rr563553 1720 bp distal
 SNP A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A
rs237187140
MGI SNP Detail
Alliance Variant		 Chr2:119452846 Nusap1 Intron
Nusap1 Noncoding-Transcript-Variant
Rr563553 1723 bp distal
 SNP A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A
rs258262828
MGI SNP Detail
Alliance Variant		 Chr2:119452872 Nusap1 Intron
Nusap1 Noncoding-Transcript-Variant
Rr563553 1749 bp distal
 SNP A/T A A A A A A A A A A A A A A A A A A T A A A T A A A A A A A A A A A A A A A A A A A T T A A
rs229764024
MGI SNP Detail
Alliance Variant		 Chr2:119452923 Nusap1 Intron
Nusap1 Noncoding-Transcript-Variant
Rr563553 1800 bp distal
 SNP A/T A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A T A A A A
rs258143299
MGI SNP Detail
Alliance Variant		 Chr2:119452991 Nusap1 Intron
Nusap1 Noncoding-Transcript-Variant
Rr563553 1868 bp distal
 SNP C/G C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C G C C C C
rs29670349
MGI SNP Detail
Alliance Variant		 Chr2:119453023 Nusap1 Intron
Nusap1 Noncoding-Transcript-Variant
Rr563553 1900 bp distal
 SNP C/G G G C G C G
rs219869437
MGI SNP Detail
Alliance Variant		 Chr2:119453066 Nusap1 Intron
Nusap1 Noncoding-Transcript-Variant
Rr563553 1943 bp distal
 SNP G/T G T
rs232379005
MGI SNP Detail
Alliance Variant		 Chr2:119453093 Nusap1 Intron
Nusap1 Noncoding-Transcript-Variant
Rr563553 1970 bp distal
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G G G G G G G G G
rs254857934
MGI SNP Detail
Alliance Variant		 Chr2:119453115 Nusap1 Intron
Nusap1 Noncoding-Transcript-Variant
Rr563553 1992 bp distal
 SNP A/G G G G G G G G G G G A A G G G G G G A G A G G G G G G G A G G G G G A G A A G G G G G G A G G G G G G G G
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Showing SNP(s) 1 - 85 of 85
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
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Send questions and comments to User Support. 		last database update
03/25/2025
MGI 6.24 		The Jackson Laboratory
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