About   Help   FAQ
Mouse SNP Summary
Symbol
Name
ID
Rr563774
regulatory region 563774
MGI:8025906

<< first < prev1 next > last >>
Showing SNP(s) 1 - 88 of 88

Your search exceeds the maximum result limit of 100,000 SNPs that can be displayed or exported to text. Use filters to refine your search or select a sub-region from the SNP Density Heatmap.
Loading...
Show only selected strains with alleles     Show all selected strains    
Drag columns to re-order.   Column order is reset with Filter or Show option change.
SNP ID
(GRCm39)
Map Position
(GRCm39)
Gene & Category Variation
Type
Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
129X1/SvJ
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PL/J
PWD/PhJ
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs239113492
MGI SNP Detail
Alliance Variant
Chr2:120930705 Rr563774 1988 bp proximal
Tgm7 Intron
SNP G/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T G T T T T
rs248737957
MGI SNP Detail
Alliance Variant
Chr2:120930847 Rr563774 1846 bp proximal
Tgm7 Intron
SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs217755866
MGI SNP Detail
Alliance Variant
Chr2:120930871 Rr563774 1822 bp proximal
Tgm7 Intron
SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G G G G G G G G G
rs230278133
MGI SNP Detail
Alliance Variant
Chr2:120930953 Rr563774 1740 bp proximal
Tgm7 Intron
SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C C C C C C C C C
rs250721666
MGI SNP Detail
Alliance Variant
Chr2:120930978 Rr563774 1715 bp proximal
Tgm7 Intron
SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs222810277
MGI SNP Detail
Alliance Variant
Chr2:120931091 Rr563774 1602 bp proximal
Tgm7 Intron
SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs584309075
MGI SNP Detail
Alliance Variant
Chr2:120931158 Rr563774 1535 bp proximal
Tgm7 Intron
SNP C/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G C G G G G
rs27454934
MGI SNP Detail
Alliance Variant
Chr2:120931260 Rr563774 1433 bp proximal
Tgm7 Intron
SNP C/T C C C C C C C C C C C C C T C
rs263342223
MGI SNP Detail
Alliance Variant
Chr2:120931299 Rr563774 1394 bp proximal
Tgm7 Intron
SNP G/T G G G G G G G G G G G G G G G G G G G T G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G
rs227310406
MGI SNP Detail
Alliance Variant
Chr2:120931402 Rr563774 1291 bp proximal
Tgm7 Intron
SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs242062205
MGI SNP Detail
Alliance Variant
Chr2:120931422 Rr563774 1271 bp proximal
Tgm7 Intron
SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs256975597
MGI SNP Detail
Alliance Variant
Chr2:120931511 Rr563774 1182 bp proximal
Tgm7 Coding-Synonymous
SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs587030436
MGI SNP Detail
Alliance Variant
Chr2:120931633 Rr563774 1060 bp proximal
Tgm7 Intron
SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs224363810
MGI SNP Detail
Alliance Variant
Chr2:120931646 Rr563774 1047 bp proximal
Tgm7 Intron
Tssr25900 within coordinates of
SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs245861381
MGI SNP Detail
Alliance Variant
Chr2:120931657 Rr563774 1036 bp proximal
Tgm7 Intron
SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs257441580
MGI SNP Detail
Alliance Variant
Chr2:120931673 Rr563774 1020 bp proximal
Tgm7 Intron
SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs232224896
MGI SNP Detail
Alliance Variant
Chr2:120931699 Rr563774 994 bp proximal
Tgm7 Intron
SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs257234333
MGI SNP Detail
Alliance Variant
Chr2:120931701 Rr563774 992 bp proximal
Tgm7 Intron
SNP C/T T T T C T C C C T T C C C C C C C C C T C T C C C T C C T C C T T C C C C C T C C T T C C C T C C T T T C
rs219152335
MGI SNP Detail
Alliance Variant
Chr2:120931760 Rr563774 933 bp proximal
Tgm7 Intron
SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs52117481
MGI SNP Detail
Alliance Variant
Chr2:120931816 Rr563774 877 bp proximal
Tgm7 Intron
SNP A/G G A A
rs581050855
MGI SNP Detail
Alliance Variant
Chr2:120931898 Rr563774 795 bp proximal
Tgm7 Intron
SNP T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T
rs584546559
MGI SNP Detail
Alliance Variant
Chr2:120931912 Rr563774 781 bp proximal
Tgm7 Intron
SNP A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A
rs579011146
MGI SNP Detail
Alliance Variant
Chr2:120931920 Rr563774 773 bp proximal
Tgm7 Intron
SNP A A A A A A A A A
rs584877582
MGI SNP Detail
Alliance Variant
Chr2:120931968 Rr563774 725 bp proximal
Tgm7 Intron
SNP A A A A A A A A A A A A A A A A A A A A A A
rs579281327
MGI SNP Detail
Alliance Variant
Chr2:120931978 Rr563774 715 bp proximal
Tgm7 Intron
SNP T T T T T T T T T T T T T T T T T T T T T T T T
SNP ID
(GRCm39)
Map Position
(GRCm39)
Gene & Category Variation
Type
Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
129X1/SvJ
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PL/J
PWD/PhJ
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs582085024
MGI SNP Detail
Alliance Variant
Chr2:120931993 Rr563774 700 bp proximal
Tgm7 Intron
SNP T T T T T T T T T T T T T T T T T T T T T T T T T T
rs585522668
MGI SNP Detail
Alliance Variant
Chr2:120931994 Rr563774 699 bp proximal
Tgm7 Intron
SNP T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T
rs579970280
MGI SNP Detail
Alliance Variant
Chr2:120931995 Rr563774 698 bp proximal
Tgm7 Intron
SNP T T T T T T T T T T T T T T T T T T T T T T T T T T
rs582329502
MGI SNP Detail
Alliance Variant
Chr2:120932010 Rr563774 683 bp proximal
Tgm7 Intron
SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T C
rs241746863
MGI SNP Detail
Alliance Variant
Chr2:120932139 Rr563774 554 bp proximal
Tgm7 Intron
SNP C/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G C G G G G
rs585639699
MGI SNP Detail
Alliance Variant
Chr2:120932144 Rr563774 549 bp proximal
Tgm7 Intron
SNP G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G
rs242744068
MGI SNP Detail
Alliance Variant
Chr2:120932154 Rr563774 539 bp proximal
Tgm7 Intron
SNP C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C
rs211869851
MGI SNP Detail
Alliance Variant
Chr2:120932285 Rr563774 408 bp proximal
Tgm7 Intron
Tgm7 mRNA-UTR
SNP A/C A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A C A A A A
rs29623413
MGI SNP Detail
Alliance Variant
Chr2:120932321 Rr563774 372 bp proximal
Tgm7 Intron
Tgm7 mRNA-UTR
SNP A/G A A G A G A G
rs249437530
MGI SNP Detail
Alliance Variant
Chr2:120932355 Rr563774 338 bp proximal
Tgm7 Intron
SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs33216290
MGI SNP Detail
Alliance Variant
Chr2:120932361 Rr563774 332 bp proximal
Tgm7 Intron
Tgm7 Splice-Site
SNP A/G A A G G G
rs238889123
MGI SNP Detail
Alliance Variant
Chr2:120932368 Rr563774 325 bp proximal
Tgm7 Intron
Tgm7 mRNA-UTR
SNP A/G A A A G A G G G A A G G G G G G G G G G G A G G G A G G A G G A A G G G G G A G G A A G G G A G G A A A G
rs29624223
MGI SNP Detail
Alliance Variant
Chr2:120932387 Rr563774 306 bp proximal
Tgm7 Intron
Tgm7 mRNA-UTR
SNP C/T C C C T C T C
rs580119563
MGI SNP Detail
Alliance Variant
Chr2:120932456 Rr563773 within coordinates of
Rr563774 237 bp proximal
Tgm7 Intron
Tgm7 mRNA-UTR
SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs583533251
MGI SNP Detail
Alliance Variant
Chr2:120932470 Rr563773 within coordinates of
Rr563774 223 bp proximal
Tgm7 Intron
Tgm7 mRNA-UTR
SNP A/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T A T T T T
rs227137662
MGI SNP Detail
Alliance Variant
Chr2:120932507 Rr563773 within coordinates of
Rr563774 186 bp proximal
Tgm7 Intron
Tgm7 mRNA-UTR
SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs242097452
MGI SNP Detail
Alliance Variant
Chr2:120932568 Rr563773 within coordinates of
Rr563774 125 bp proximal
Tgm7 Intron
Tgm7 mRNA-UTR
SNP C/T C C C C C C C C C C C C C C C C C C C T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C
rs27454933
MGI SNP Detail
Alliance Variant
Chr2:120932595 Rr563773 within coordinates of
Rr563774 98 bp proximal
Tgm7 Intron
Tgm7 mRNA-UTR
SNP A/C C C A C A C A A A A C C A A C A C
rs587222717
MGI SNP Detail
Alliance Variant
Chr2:120932626 Rr563773 within coordinates of
Rr563774 67 bp proximal
Tgm7 Intron
Tgm7 mRNA-UTR
SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs218192051
MGI SNP Detail
Alliance Variant
Chr2:120932644 Rr563773 within coordinates of
Rr563774 49 bp proximal
Tgm7 Intron
Tgm7 mRNA-UTR
SNP A/C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C A C C C C
rs27454932
MGI SNP Detail
Alliance Variant
Chr2:120932663 Rr563773 within coordinates of
Rr563774 30 bp proximal
Tgm7 Intron
Tgm7 mRNA-UTR
SNP A/T T T T T T T T T A A T T T T
rs262436568
MGI SNP Detail
Alliance Variant
Chr2:120932821 Rr563773 within coordinates of
Rr563774 107 bp distal
Tgm7 Intron
Tgm7 mRNA-UTR
SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs580375572
MGI SNP Detail
Alliance Variant
Chr2:120932824 Rr563773 within coordinates of
Rr563774 110 bp distal
Tgm7 Intron
Tgm7 mRNA-UTR
SNP G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G
rs232988046
MGI SNP Detail
Alliance Variant
Chr2:120932835 Rr563774 121 bp distal
Tgm7 Intron
Tgm7 mRNA-UTR
SNP C/G C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C G C C C C
rs252136918
MGI SNP Detail
Alliance Variant
Chr2:120932891 Rr563774 177 bp distal
Tgm7 Intron
Tgm7 mRNA-UTR
SNP G/T G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G T G G G G
SNP ID
(GRCm39)
Map Position
(GRCm39)
Gene & Category Variation
Type
Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
129X1/SvJ
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PL/J
PWD/PhJ
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs266140955
MGI SNP Detail
Alliance Variant
Chr2:120932905 Rr563774 191 bp distal
Tgm7 Intron
Tgm7 mRNA-UTR
SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs228343691
MGI SNP Detail
Alliance Variant
Chr2:120933032 Rr563774 318 bp distal
Tgm7 Intron
Tgm7 mRNA-UTR
SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs243022656
MGI SNP Detail
Alliance Variant
Chr2:120933038 Rr563774 324 bp distal
Tgm7 Intron
Tgm7 mRNA-UTR
SNP A/C A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A C A A A A
rs211758691
MGI SNP Detail
Alliance Variant
Chr2:120933047 Rr563774 333 bp distal
Tgm7 Intron
Tgm7 mRNA-UTR
SNP A/T A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A T A A A A
rs225763901
MGI SNP Detail
Alliance Variant
Chr2:120933075 Rr563774 361 bp distal
Tgm7 Intron
Tgm7 mRNA-UTR
SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs583226579
MGI SNP Detail
Alliance Variant
Chr2:120933203 Rr563774 489 bp distal
Tgm7 Intron
Tgm7 mRNA-UTR
SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs243614334
MGI SNP Detail
Alliance Variant
Chr2:120933255 Rr563774 541 bp distal
Tgm7 Intron
Tgm7 mRNA-UTR
SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs216401680
MGI SNP Detail
Alliance Variant
Chr2:120933259 Rr563774 545 bp distal
Tgm7 Intron
Tgm7 mRNA-UTR
SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs241486008
MGI SNP Detail
Alliance Variant
Chr2:120933280 Rr563774 566 bp distal
Tgm7 Intron
Tgm7 mRNA-UTR
SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs258892773
MGI SNP Detail
Alliance Variant
Chr2:120933314 Rr563774 600 bp distal
Tgm7 Intron
Tgm7 mRNA-UTR
SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs219405539
MGI SNP Detail
Alliance Variant
Chr2:120933418 Rr563774 704 bp distal
Tgm7 Intron
Tgm7 mRNA-UTR
SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs235965664
MGI SNP Detail
Alliance Variant
Chr2:120933505 Rr563774 791 bp distal
Tgm7 Intron
Tgm7 mRNA-UTR
SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs250791699
MGI SNP Detail
Alliance Variant
Chr2:120933621 Rr563774 907 bp distal
Tgm7 Intron
Tgm7 mRNA-UTR
SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs218224704
MGI SNP Detail
Alliance Variant
Chr2:120933667 Rr563774 953 bp distal
Tgm7 Intron
Tgm7 mRNA-UTR
SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs239788137
MGI SNP Detail
Alliance Variant
Chr2:120933740 Rr563774 1026 bp distal
Tgm7 Intron
Tgm7 mRNA-UTR
SNP A/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T A T T T T
rs27454931
MGI SNP Detail
Alliance Variant
Chr2:120933746 Rr563774 1032 bp distal
Tgm7 Intron
Tgm7 mRNA-UTR
SNP G/T G G T G T G T G G T G G G G T G G T G
rs27454930
MGI SNP Detail
Alliance Variant
Chr2:120933759 Rr563774 1045 bp distal
Tgm7 Intron
Tgm7 mRNA-UTR
SNP G/T G G G G G T G G G G G T G G G
rs247681055
MGI SNP Detail
Alliance Variant
Chr2:120933830 Rr563774 1116 bp distal
Tgm7 Intron
Tgm7 mRNA-UTR
SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs264374028
MGI SNP Detail
Alliance Variant
Chr2:120933869 Rr563774 1155 bp distal
Tgm7 Intron
Tgm7 mRNA-UTR
SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs228198639
MGI SNP Detail
Alliance Variant
Chr2:120933971 Rr563774 1257 bp distal
Tgm7 Intron
Tgm7 mRNA-UTR
SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs236677307
MGI SNP Detail
Alliance Variant
Chr2:120934009 Rr563774 1295 bp distal
Tgm7 Intron
Tgm7 mRNA-UTR
SNP G/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T G T T T T
rs29816471
MGI SNP Detail
Alliance Variant
Chr2:120934011 Rr563774 1297 bp distal
Tgm7 Intron
Tgm7 mRNA-UTR
SNP C/T C T T
rs225851024
MGI SNP Detail
Alliance Variant
Chr2:120934028 Rr563774 1314 bp distal
Tgm7 Intron
Tgm7 mRNA-UTR
SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs49714807
MGI SNP Detail
Alliance Variant
Chr2:120934030 Rr563774 1316 bp distal
Tgm7 Intron
Tgm7 mRNA-UTR
SNP G G
rs29969762
MGI SNP Detail
Alliance Variant
Chr2:120934037 Rr563774 1323 bp distal
Tgm7 Intron
Tgm7 mRNA-UTR
SNP C/T T C
SNP ID
(GRCm39)
Map Position
(GRCm39)
Gene & Category Variation
Type
Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
129X1/SvJ
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PL/J
PWD/PhJ
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs29559896
MGI SNP Detail
Alliance Variant
Chr2:120934040 Rr563774 1326 bp distal
Tgm7 Intron
Tgm7 mRNA-UTR
SNP A/C C A
rs259860251
MGI SNP Detail
Alliance Variant
Chr2:120934055 Rr563774 1341 bp distal
Tgm7 Intron
Tgm7 mRNA-UTR
SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs217699579
MGI SNP Detail
Alliance Variant
Chr2:120934078 Rr563774 1364 bp distal
Tgm7 Intron
Tgm7 mRNA-UTR
SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs235761821
MGI SNP Detail
Alliance Variant
Chr2:120934114 Rr563774 1400 bp distal
Tgm7 Intron
Tgm7 mRNA-UTR
SNP A/C A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A C A A A A
rs250872285
MGI SNP Detail
Alliance Variant
Chr2:120934126 Rr563774 1412 bp distal
Tgm7 Intron
Tgm7 mRNA-UTR
SNP A/C A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A C A A A A
rs212432008
MGI SNP Detail
Alliance Variant
Chr2:120934152 Rr563774 1438 bp distal
Tgm7 Intron
Tgm7 mRNA-UTR
SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs27454929
MGI SNP Detail
Alliance Variant
Chr2:120934258 Rr563774 1544 bp distal
Tgm7 Intron
SNP C/T C C T C T C T C T C C C C T C C T C
rs257128895
MGI SNP Detail
Alliance Variant
Chr2:120934402 Rr563774 1688 bp distal
Tgm7 Coding-Synonymous
SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs225262923
MGI SNP Detail
Alliance Variant
Chr2:120934432 Rr563774 1718 bp distal
Tgm7 Coding-Synonymous
SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs29882832
MGI SNP Detail
Alliance Variant
Chr2:120934522 Rr563774 1808 bp distal
Tgm7 Intron
SNP A/G A G G G
rs264294844
MGI SNP Detail
Alliance Variant
Chr2:120934557 Rr563774 1843 bp distal
Tgm7 Intron
SNP A/T A A A A A A A A A A A A A A A A A A A T A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A
rs27454928
MGI SNP Detail
Alliance Variant
Chr2:120934605 Rr563774 1891 bp distal
Tgm7 Coding-Synonymous
SNP A/G G G G G G G A G G G G G G G G
rs236564122
MGI SNP Detail
Alliance Variant
Chr2:120934710 Rr563774 1996 bp distal
Tgm7 Intron
SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
<< first < prev1 next > last >>
Showing SNP(s) 1 - 88 of 88

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
Citing These Resources
Funding Information
Warranty Disclaimer, Privacy Notice, Licensing, & Copyright
Send questions and comments to User Support.
last database update
03/18/2025
MGI 6.24
The Jackson Laboratory