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Mouse SNP Summary
Symbol
Name
ID
Rr563854
regulatory region 563854
MGI:8025986

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Showing SNP(s) 1 - 100 of 116

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SNP ID
(GRCm39)
Map Position
(GRCm39)
Gene & Category Variation
Type
Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
129X1/SvJ
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PL/J
PWD/PhJ
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs582735474
MGI SNP Detail
Alliance Variant
Chr2:121402673 Frmd5 Intron
Frmd5 Noncoding-Transcript-Variant
Rr563852 within coordinates of
Rr563854 1989 bp proximal
SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs50922139
MGI SNP Detail
Alliance Variant
Chr2:121402680 Frmd5 Intron
Frmd5 Noncoding-Transcript-Variant
Rr563852 within coordinates of
Rr563854 1982 bp proximal
SNP A/C A C
rs48826173
MGI SNP Detail
Alliance Variant
Chr2:121402705 Frmd5 Intron
Frmd5 Noncoding-Transcript-Variant
Rr563852 within coordinates of
Rr563854 1957 bp proximal
SNP A/G G A
rs47089021
MGI SNP Detail
Alliance Variant
Chr2:121402742 Frmd5 Intron
Frmd5 Noncoding-Transcript-Variant
Rr563854 1920 bp proximal
SNP C/T C C T C
rs46174959
MGI SNP Detail
Alliance Variant
Chr2:121402752 Frmd5 Intron
Frmd5 Noncoding-Transcript-Variant
Rr563854 1910 bp proximal
SNP A/T T A
rs584357337
MGI SNP Detail
Alliance Variant
Chr2:121402950 Frmd5 Intron
Frmd5 Noncoding-Transcript-Variant
Rr563854 1712 bp proximal
SNP T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T
rs246549381
MGI SNP Detail
Alliance Variant
Chr2:121402954 Frmd5 Intron
Frmd5 Noncoding-Transcript-Variant
Rr563854 1708 bp proximal
SNP C/T T T T C T T T T C C C C C C T T T C T T T T C T C C T T T C T T T T T
rs578376202
MGI SNP Detail
Alliance Variant
Chr2:121402968 Frmd5 Intron
Frmd5 Noncoding-Transcript-Variant
Rr563854 1694 bp proximal
SNP C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C
rs582408579
MGI SNP Detail
Alliance Variant
Chr2:121402969 Frmd5 Intron
Frmd5 Noncoding-Transcript-Variant
Rr563854 1693 bp proximal
SNP A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A
rs212757329
MGI SNP Detail
Alliance Variant
Chr2:121403004 Frmd5 Intron
Frmd5 Noncoding-Transcript-Variant
Rr563854 1658 bp proximal
SNP C/T C T T T C C C C C C T T C T C C T T T T T
rs386927334
MGI SNP Detail
Alliance Variant
Chr2:121403016 Frmd5 Intron
Frmd5 Noncoding-Transcript-Variant
Rr563854 1646 bp proximal
SNP C/T T T T T T T T T T T T T C
rs579110657
MGI SNP Detail
Alliance Variant
Chr2:121403019 Frmd5 Intron
Frmd5 Noncoding-Transcript-Variant
Rr563854 1643 bp proximal
SNP C/T C C C C C C C C C C C C T
rs582391340
MGI SNP Detail
Alliance Variant
Chr2:121403021 Frmd5 Intron
Frmd5 Noncoding-Transcript-Variant
Rr563854 1641 bp proximal
SNP C/T C C C C C C C C C C C C T
rs229906330
MGI SNP Detail
Alliance Variant
Chr2:121403303 Frmd5 Intron
Frmd5 Noncoding-Transcript-Variant
Rr563854 1359 bp proximal
SNP A/C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C A C C C C
rs47844646
MGI SNP Detail
Alliance Variant
Chr2:121403321 Frmd5 Intron
Frmd5 Noncoding-Transcript-Variant
Rr563854 1341 bp proximal
SNP C/T T T C T
rs27425053
MGI SNP Detail
Alliance Variant
Chr2:121403452 Frmd5 Intron
Frmd5 Noncoding-Transcript-Variant
Rr563854 1210 bp proximal
SNP C/T C C C C C C C C T T C T C C
rs240540512
MGI SNP Detail
Alliance Variant
Chr2:121403491 Frmd5 Intron
Frmd5 Noncoding-Transcript-Variant
Rr563854 1171 bp proximal
SNP C/T C C C C C T C C C C C T T T T T T C C C C T C C C C T C C T C C T C C C C C C T C C C C C C C C C C C C
rs51240918
MGI SNP Detail
Alliance Variant
Chr2:121403509 Frmd5 Intron
Frmd5 Noncoding-Transcript-Variant
Rr563854 1153 bp proximal
SNP G/T T T G T
rs224617970
MGI SNP Detail
Alliance Variant
Chr2:121403512 Frmd5 Intron
Frmd5 Noncoding-Transcript-Variant
Rr563854 1150 bp proximal
SNP C/T C C C C C C C C C C C C C C C C C C C C C C T C C C C C C C C C C C C C C C C C T C C C C C C C C C C C C
rs46939290
MGI SNP Detail
Alliance Variant
Chr2:121403521 Frmd5 Intron
Frmd5 Noncoding-Transcript-Variant
Rr563854 1141 bp proximal
SNP C/T C C C T C
rs254870662
MGI SNP Detail
Alliance Variant
Chr2:121403665 Frmd5 Intron
Frmd5 Noncoding-Transcript-Variant
Rr563854 997 bp proximal
SNP A/C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C A C C C C
rs219093995
MGI SNP Detail
Alliance Variant
Chr2:121403672 Frmd5 Intron
Frmd5 Noncoding-Transcript-Variant
Rr563854 990 bp proximal
SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs237574316
MGI SNP Detail
Alliance Variant
Chr2:121403705 Frmd5 Intron
Frmd5 Noncoding-Transcript-Variant
Rr563854 957 bp proximal
SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs46034604
MGI SNP Detail
Alliance Variant
Chr2:121403788 Frmd5 Intron
Frmd5 Noncoding-Transcript-Variant
Rr563854 874 bp proximal
SNP A/C A A C A
rs246659306
MGI SNP Detail
Alliance Variant
Chr2:121403958 Frmd5 Intron
Frmd5 Noncoding-Transcript-Variant
Rr563854 704 bp proximal
SNP C/G C C C C C G C C C C C C G G G G G G C C C C C C C C C G C C G C C G C C C C C C C C C C C C C C C C C C
SNP ID
(GRCm39)
Map Position
(GRCm39)
Gene & Category Variation
Type
Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
129X1/SvJ
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PL/J
PWD/PhJ
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs212898501
MGI SNP Detail
Alliance Variant
Chr2:121404001 Frmd5 Intron
Frmd5 Noncoding-Transcript-Variant
Rr563854 661 bp proximal
SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs27425052
MGI SNP Detail
Alliance Variant
Chr2:121404018 Frmd5 Intron
Frmd5 Noncoding-Transcript-Variant
Frmd5 Splice-Site
Rr563854 644 bp proximal
SNP C/T T T T T T T T T T T T T C
rs244475398
MGI SNP Detail
Alliance Variant
Chr2:121404115 Frmd5 Coding-Synonymous
Frmd5 mRNA-UTR
Frmd5 Noncoding-Transcript-Variant
Rr563854 547 bp proximal
SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs580479769
MGI SNP Detail
Alliance Variant
Chr2:121404177 Frmd5 Intron
Frmd5 Noncoding-Transcript-Variant
Rr563854 485 bp proximal
SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs213870905
MGI SNP Detail
Alliance Variant
Chr2:121404184 Frmd5 Intron
Frmd5 Noncoding-Transcript-Variant
Rr563854 478 bp proximal
SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs238459663
MGI SNP Detail
Alliance Variant
Chr2:121404210 Frmd5 Intron
Frmd5 Noncoding-Transcript-Variant
Rr563854 452 bp proximal
SNP C/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G C G G G G
rs27425051
MGI SNP Detail
Alliance Variant
Chr2:121404223 Frmd5 Intron
Frmd5 Noncoding-Transcript-Variant
Rr563854 439 bp proximal
SNP A/G G G G G G A A G G G
rs218720718
MGI SNP Detail
Alliance Variant
Chr2:121404227 Frmd5 Intron
Frmd5 Noncoding-Transcript-Variant
Rr563854 435 bp proximal
SNP G/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T G T T T T
rs235291460
MGI SNP Detail
Alliance Variant
Chr2:121404253 Frmd5 Intron
Frmd5 Noncoding-Transcript-Variant
Rr563854 409 bp proximal
SNP C/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G C G G G G
rs254808532
MGI SNP Detail
Alliance Variant
Chr2:121404265 Frmd5 Intron
Frmd5 Noncoding-Transcript-Variant
Rr563854 397 bp proximal
SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs219214433
MGI SNP Detail
Alliance Variant
Chr2:121404283 Frmd5 Intron
Frmd5 Noncoding-Transcript-Variant
Rr563854 379 bp proximal
SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs49941283
MGI SNP Detail
Alliance Variant
Chr2:121404392 Frmd5 Intron
Frmd5 Noncoding-Transcript-Variant
Rr563854 270 bp proximal
SNP C/T C C T C
rs27425050
MGI SNP Detail
Alliance Variant
Chr2:121404431 Frmd5 Intron
Frmd5 Noncoding-Transcript-Variant
Rr563854 231 bp proximal
SNP A/G A A G G A A
rs51893748
MGI SNP Detail
Alliance Variant
Chr2:121404441 Frmd5 Intron
Frmd5 Noncoding-Transcript-Variant
Rr563854 221 bp proximal
SNP C C C
rs27425049
MGI SNP Detail
Alliance Variant
Chr2:121404480 Frmd5 Intron
Frmd5 Noncoding-Transcript-Variant
Rr563854 182 bp proximal
SNP A/C C C C A A C C C
rs46543962
MGI SNP Detail
Alliance Variant
Chr2:121404494 Frmd5 Intron
Frmd5 Noncoding-Transcript-Variant
Rr563854 168 bp proximal
SNP A/C A A C A
rs51678652
MGI SNP Detail
Alliance Variant
Chr2:121404528 Frmd5 Intron
Frmd5 Noncoding-Transcript-Variant
Rr563854 134 bp proximal
SNP A/C C C A C
rs27425048
MGI SNP Detail
Alliance Variant
Chr2:121404540 Frmd5 Intron
Frmd5 Noncoding-Transcript-Variant
Rr563854 122 bp proximal
SNP A/G A A G G A A
rs50551627
MGI SNP Detail
Alliance Variant
Chr2:121404550 Frmd5 Intron
Frmd5 Noncoding-Transcript-Variant
Rr563854 112 bp proximal
SNP A/C C C A C
rs223488628
MGI SNP Detail
Alliance Variant
Chr2:121404554 Frmd5 Intron
Frmd5 Noncoding-Transcript-Variant
Rr563854 108 bp proximal
SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs244417699
MGI SNP Detail
Alliance Variant
Chr2:121404574 Frmd5 Intron
Frmd5 Noncoding-Transcript-Variant
Rr563854 88 bp proximal
SNP A/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T A T T T T
rs213605781
MGI SNP Detail
Alliance Variant
Chr2:121404620 Frmd5 Intron
Frmd5 Noncoding-Transcript-Variant
Rr563854 42 bp proximal
SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs27425047
MGI SNP Detail
Alliance Variant
Chr2:121404622 Frmd5 Intron
Frmd5 Noncoding-Transcript-Variant
Rr563854 40 bp proximal
SNP C/T T T T T T T C C T T T
rs27425046
MGI SNP Detail
Alliance Variant
Chr2:121404658 Frmd5 Intron
Frmd5 Noncoding-Transcript-Variant
Rr563854 4 bp proximal
SNP C/T C C C C C T T C C C
rs27425045
MGI SNP Detail
Alliance Variant
Chr2:121404674 Frmd5 Intron
Frmd5 Noncoding-Transcript-Variant
Rr563854 within coordinates of
SNP G/T G G G G G T T G G G
SNP ID
(GRCm39)
Map Position
(GRCm39)
Gene & Category Variation
Type
Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
129X1/SvJ
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PL/J
PWD/PhJ
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs27425044
MGI SNP Detail
Alliance Variant
Chr2:121404714 Frmd5 Intron
Frmd5 Noncoding-Transcript-Variant
Rr563854 within coordinates of
SNP C/T C C C C C C C C T T C C C
rs243993103
MGI SNP Detail
Alliance Variant
Chr2:121404771 Frmd5 Intron
Frmd5 Noncoding-Transcript-Variant
Rr563854 within coordinates of
SNP C/T T T T T T C T T T T T T C C C C C C T T T T T T T T T C T T C T T C T T T T T T T T T T T T T T T T T T T
rs213211123
MGI SNP Detail
Alliance Variant
Chr2:121404772 Frmd5 Intron
Frmd5 Noncoding-Transcript-Variant
Rr563854 within coordinates of
SNP A/G G G G G G A G G G G G G A A A A A A G G G G G G G G G A G G A G G A G G G G G G G G G G G G G G G G G G G
rs230224548
MGI SNP Detail
Alliance Variant
Chr2:121404775 Frmd5 Intron
Frmd5 Noncoding-Transcript-Variant
Rr563854 within coordinates of
SNP C/T C C C C C T C C C C C C T T T T T T C C C C C C C C C T C C T C C T C C C C C C C C C C C C C C C C C C C
rs46274475
MGI SNP Detail
Alliance Variant
Chr2:121404935 Frmd5 Intron
Frmd5 Noncoding-Transcript-Variant
Rr563854 within coordinates of
SNP A/T A T
rs45879499
MGI SNP Detail
Alliance Variant
Chr2:121404945 Frmd5 Intron
Frmd5 Noncoding-Transcript-Variant
Rr563854 within coordinates of
SNP C/T C T
rs241478403
MGI SNP Detail
Alliance Variant
Chr2:121405047 Frmd5 Intron
Frmd5 Noncoding-Transcript-Variant
Rr563854 within coordinates of
SNP A/C A A A A A C A A A A A C C C C C C A A A A C A A A A C A A C A A C A A A A A A C A A A A A A A C A A A A
rs258781364
MGI SNP Detail
Alliance Variant
Chr2:121405053 Frmd5 Intron
Frmd5 Noncoding-Transcript-Variant
Rr563854 within coordinates of
SNP G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G
rs222896492
MGI SNP Detail
Alliance Variant
Chr2:121405055 Frmd5 Intron
Frmd5 Noncoding-Transcript-Variant
Rr563854 within coordinates of
SNP G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G
rs584032899
MGI SNP Detail
Alliance Variant
Chr2:121405057 Frmd5 Intron
Frmd5 Noncoding-Transcript-Variant
Rr563854 within coordinates of
SNP G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G
rs240860117
MGI SNP Detail
Alliance Variant
Chr2:121405061 Frmd5 Intron
Frmd5 Noncoding-Transcript-Variant
Rr563854 within coordinates of
SNP C/T C C C C T C C C C C T T T T T T C C C C T C C C C T C T C C T C C C C C C T C C C C C C C C C
rs254700264
MGI SNP Detail
Alliance Variant
Chr2:121405063 Frmd5 Intron
Frmd5 Noncoding-Transcript-Variant
Rr563854 within coordinates of
SNP A/G A A A A G A A A A A G G G G G G A A A G A A A A G A G A A G A A A A A A G A A A A A A A A
rs585708668
MGI SNP Detail
Alliance Variant
Chr2:121405077 Frmd5 Intron
Frmd5 Noncoding-Transcript-Variant
Rr563854 5 bp distal
SNP T T T T T T T T T T T T T
rs579531491
MGI SNP Detail
Alliance Variant
Chr2:121405109 Frmd5 Intron
Frmd5 Noncoding-Transcript-Variant
Rr563854 37 bp distal
SNP C/T C C C C C C C C C C T C C C C C C C C C
rs238341260
MGI SNP Detail
Alliance Variant
Chr2:121405156 Frmd5 Intron
Frmd5 Noncoding-Transcript-Variant
Rr563854 84 bp distal
SNP A/C C C C C C C C C C C A C C
rs265071977
MGI SNP Detail
Alliance Variant
Chr2:121405172 Frmd5 Intron
Frmd5 Noncoding-Transcript-Variant
Rr563854 100 bp distal
SNP A/G G G G G G G G G G A G G
rs232248557
MGI SNP Detail
Alliance Variant
Chr2:121405182 Frmd5 Intron
Frmd5 Noncoding-Transcript-Variant
Rr563854 110 bp distal
SNP A/G A G A G G G G G G A G G A G A G
rs257119122
MGI SNP Detail
Alliance Variant
Chr2:121405196 Frmd5 Intron
Frmd5 Noncoding-Transcript-Variant
Rr563854 124 bp distal
SNP G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G
rs264296855
MGI SNP Detail
Alliance Variant
Chr2:121405201 Frmd5 Intron
Frmd5 Noncoding-Transcript-Variant
Rr563854 129 bp distal
SNP A/C A A A A A C A A A A A A C C C C C C A A A A A A A A C A C A A C A A A A A A A A A A A A A C A A A A
rs228422670
MGI SNP Detail
Alliance Variant
Chr2:121405203 Frmd5 Intron
Frmd5 Noncoding-Transcript-Variant
Rr563854 131 bp distal
SNP C/T T T T T T C T T T T T T C C C C C C T T T T T T T T C T C T T C T T T T T T T T T T T T T C T T T T
rs580937670
MGI SNP Detail
Alliance Variant
Chr2:121405205 Frmd5 Intron
Frmd5 Noncoding-Transcript-Variant
Rr563854 133 bp distal
SNP G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G
rs243937967
MGI SNP Detail
Alliance Variant
Chr2:121405232 Frmd5 Intron
Frmd5 Noncoding-Transcript-Variant
Rr563854 160 bp distal
SNP G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G
rs211732960
MGI SNP Detail
Alliance Variant
Chr2:121405265 Frmd5 Intron
Frmd5 Noncoding-Transcript-Variant
Rr563854 193 bp distal
SNP A/G A A A A A A A A A A A A A A A A A A A A A G A A A A A A A A A A A A A A A A A A A A A A A A G A A A
rs52468141
MGI SNP Detail
Alliance Variant
Chr2:121405267 Frmd5 Intron
Frmd5 Noncoding-Transcript-Variant
Rr563854 195 bp distal
SNP C/T C T
rs251850293
MGI SNP Detail
Alliance Variant
Chr2:121405273 Frmd5 Intron
Frmd5 Noncoding-Transcript-Variant
Rr563854 201 bp distal
SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T
SNP ID
(GRCm39)
Map Position
(GRCm39)
Gene & Category Variation
Type
Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
129X1/SvJ
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PL/J
PWD/PhJ
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs583489714
MGI SNP Detail
Alliance Variant
Chr2:121405286 Frmd5 Intron
Frmd5 Noncoding-Transcript-Variant
Rr563854 214 bp distal
SNP C/T C C C C C C C C C C C C C C C C C C C C C T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C
rs263053065
MGI SNP Detail
Alliance Variant
Chr2:121405347 Frmd5 Intron
Frmd5 Noncoding-Transcript-Variant
Rr563854 275 bp distal
SNP C/T C C C C C C C T C C T C T T
rs222831645
MGI SNP Detail
Alliance Variant
Chr2:121405349 Frmd5 Intron
Frmd5 Noncoding-Transcript-Variant
Rr563854 277 bp distal
SNP G G G G G G G G G G G G G G G G G G G G G G G G G G G
rs234522608
MGI SNP Detail
Alliance Variant
Chr2:121405357 Frmd5 Intron
Frmd5 Noncoding-Transcript-Variant
Rr563854 285 bp distal
SNP A A A A A A A A A A A A
rs587110323
MGI SNP Detail
Alliance Variant
Chr2:121405363 Frmd5 Intron
Frmd5 Noncoding-Transcript-Variant
Rr563854 291 bp distal
SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs581817254
MGI SNP Detail
Alliance Variant
Chr2:121405364 Frmd5 Intron
Frmd5 Noncoding-Transcript-Variant
Rr563854 292 bp distal
SNP C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C
rs249108177
MGI SNP Detail
Alliance Variant
Chr2:121405365 Frmd5 Intron
Frmd5 Noncoding-Transcript-Variant
Rr563854 293 bp distal
SNP A/G G G G G G G G G G G G G G A
rs220149289
MGI SNP Detail
Alliance Variant
Chr2:121405372 Frmd5 Intron
Frmd5 Noncoding-Transcript-Variant
Rr563854 300 bp distal
SNP A/T A T
rs585196469
MGI SNP Detail
Alliance Variant
Chr2:121405383 Frmd5 Intron
Frmd5 Noncoding-Transcript-Variant
Rr563854 311 bp distal
SNP G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G
rs578476263
MGI SNP Detail
Alliance Variant
Chr2:121405414 Frmd5 Intron
Frmd5 Noncoding-Transcript-Variant
Rr563854 342 bp distal
SNP C/T T T T T T T T T T T T T T T T T T T T T T C T T T T T T T T T T T T T T T T T C T T T T T T T T T T T
rs247001488
MGI SNP Detail
Alliance Variant
Chr2:121405432 Frmd5 Intron
Frmd5 Noncoding-Transcript-Variant
Rr563854 360 bp distal
SNP A/G A A A A A A A A A A A A A A A A A A A A A G A A A A A A A A A A A A A A A A A G A A A A A A A A A A A
rs244994974
MGI SNP Detail
Alliance Variant
Chr2:121405449 Frmd5 Intron
Frmd5 Noncoding-Transcript-Variant
Rr563854 377 bp distal
SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs261182274
MGI SNP Detail
Alliance Variant
Chr2:121405497 Frmd5 Intron
Frmd5 Noncoding-Transcript-Variant
Rr563854 425 bp distal
SNP A/G A A A A A A A A A A A A A A A A A A A A A G A A A A A A A A A A A A A A A A A G A A A A A A A G A A A A
rs228500395
MGI SNP Detail
Alliance Variant
Chr2:121405499 Frmd5 Intron
Frmd5 Noncoding-Transcript-Variant
Rr563854 427 bp distal
SNP A/T T T T T T T T T T T T T T T T T T T T T T A T T T T T T T T T T T T T T T T T A T T T T T T T A T T T T
rs244061301
MGI SNP Detail
Alliance Variant
Chr2:121405546 Frmd5 Intron
Frmd5 Noncoding-Transcript-Variant
Rr563854 474 bp distal
SNP C/G C C C C C C C C C C C C C C C C C C C C C G C C C C C C C C C C C C C C C C C G C C C C C C C C C C C C
rs255846021
MGI SNP Detail
Alliance Variant
Chr2:121405625 Frmd5 Intron
Frmd5 Noncoding-Transcript-Variant
Rr563854 553 bp distal
SNP A/G A A A A A A A A A A A A A A A A A A A A A G A A A A A A A A A A A A A A A A A G A A A A A A A G A A A A
rs29917757
MGI SNP Detail
Alliance Variant
Chr2:121405638 Frmd5 Intron
Frmd5 Noncoding-Transcript-Variant
Rr563854 566 bp distal
SNP A/G G G G A G A
rs33274858
MGI SNP Detail
Alliance Variant
Chr2:121405866 Frmd5 Intron
Frmd5 Noncoding-Transcript-Variant
Rr563854 794 bp distal
SNP A/G G G G A G A G
rs27425043
MGI SNP Detail
Alliance Variant
Chr2:121405995 Frmd5 Intron
Frmd5 Noncoding-Transcript-Variant
Rr563854 923 bp distal
SNP G/T T T T T T T T T T T G T
rs233570151
MGI SNP Detail
Alliance Variant
Chr2:121406002 Frmd5 Intron
Frmd5 Noncoding-Transcript-Variant
Rr563854 930 bp distal
SNP C/G C C C C C C C C C C C C C C C C C C C C C C G C C C C C C C C C C C C C C C C C G C C C C C C C G C C C C
rs252740087
MGI SNP Detail
Alliance Variant
Chr2:121406029 Frmd5 Intron
Frmd5 Noncoding-Transcript-Variant
Rr563854 957 bp distal
SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs217505692
MGI SNP Detail
Alliance Variant
Chr2:121406065 Frmd5 Intron
Frmd5 Noncoding-Transcript-Variant
Rr563854 993 bp distal
SNP C/T T T T T T T T T T T T T T T T T T T T C T T C T T T T T T T T T T T T T T T T T C T T T T T T T C T T T T
rs27425042
MGI SNP Detail
Alliance Variant
Chr2:121406114 Frmd5 Intron
Frmd5 Noncoding-Transcript-Variant
Rr563854 1042 bp distal
SNP C/T C C C C C C C C C C C T C
rs249048843
MGI SNP Detail
Alliance Variant
Chr2:121406266 Frmd5 Intron
Frmd5 Noncoding-Transcript-Variant
Rr563854 1194 bp distal
Rr563855 within coordinates of
SNP A/C A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A C A A A A
rs212278537
MGI SNP Detail
Alliance Variant
Chr2:121406294 Frmd5 Intron
Frmd5 Noncoding-Transcript-Variant
Rr563854 1222 bp distal
Rr563855 within coordinates of
SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
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Showing SNP(s) 1 - 100 of 116

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Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
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last database update
03/18/2025
MGI 6.24
The Jackson Laboratory