Rr564475 Mouse SNP Summary

Mouse SNP Summary

Symbol
Name
ID

Rr564475
regulatory region 564475
MGI:8026607

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Showing SNP(s) 1 - 94 of 94

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SNP ID (GRCm39)	Map Position (GRCm39)	Gene & Category	Variation Type	Allele Summary (all strains)	129P2/OlaHsd	129S1/SvImJ	129S5/SvEvBrd	129X1/SvJ	A/J	AKR/J	B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ	BALB/cByJ	BALB/cJ	BTBR T<+> Itpr3<tf>/J	BUB/BnJ	C3H/HeH	C3H/HeJ	C57BL/10J	C57BL/10SnJ	C57BL/6J	C57BL/6NJ	C57BR/cdJ	C57L/J	C58/J	CAST/EiJ	CBA/J	CE/J	CZECHII/EiJ	DBA/1J	DBA/2J	FVB/NJ	I/LnJ	JF1/MsJ	KK/HlJ	LEWES/EiJ	LG/J	LP/J	MA/MyJ	MOLF/EiJ	NOD/ShiLtJ	NON/ShiLtJ	NZB/BlNJ	NZO/HlLtJ	NZW/LacJ	PL/J	PWD/PhJ	PWK/PhJ	QSi3/Ianm	QSi5/Ianm	RF/J	RIIIS/J	SEA/GnJ	SJL/J	SM/J	SPRET/EiJ	ST/bJ	SWR/J	WSB/EiJ	ZALENDE/EiJ
rs3658292 MGI SNP Detail Alliance Variant	Chr2:127080020	Rr564475 1977 bp proximal Snrnp200 Coding-Synonymous	SNP	C/T		C			C	C		C		C			T			C					C					T	C			C					C	C				C		T												C
rs584941196 MGI SNP Detail Alliance Variant	Chr2:127080234	Rr564475 1763 bp proximal Snrnp200 Intron	SNP	G/T	G	G	G		G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G		G	G	G	G	G	G	G	G	T	G	G	G	G
rs27434229 MGI SNP Detail Alliance Variant	Chr2:127080271	Rr564475 1726 bp proximal Snrnp200 Intron	SNP	A/T		T			T	T		T		T			T								A					T	T			T					T	T				T		T												T
rs265810912 MGI SNP Detail Alliance Variant	Chr2:127080315	Rr564475 1682 bp proximal Snrnp200 Intron	SNP	G/T	T	T	T		T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T		T	T	T	T	T	T	T	T	G	T	T	T	T
rs27434228 MGI SNP Detail Alliance Variant	Chr2:127080557	Rr564475 1440 bp proximal Snrnp200 Coding-Synonymous	SNP	A/G		G			G	G		G		G			G								G					G	G			G					G	G				G		G												A
rs27434227 MGI SNP Detail Alliance Variant	Chr2:127080785	Rr564475 1212 bp proximal Snrnp200 Intron	SNP	C/G		G		G	G	G		G		G			C			G					G					C	G			G					G	G				G		C												G
rs211770002 MGI SNP Detail Alliance Variant	Chr2:127080832	Rr564475 1165 bp proximal Snrnp200 Intron	SNP	A/G	A	A	A		A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A		A	A	A	A	A	A	A	A	G	A	A	A	A
rs33757465 MGI SNP Detail Alliance Variant	Chr2:127080900	Rr564475 1097 bp proximal Snrnp200 Intron	SNP	G/T				T	T											T										G
rs33518566 MGI SNP Detail Alliance Variant	Chr2:127080947	Rr564475 1050 bp proximal Snrnp200 Intron	SNP	A/G				A	G											G										A
rs29911943 MGI SNP Detail Alliance Variant	Chr2:127080958	Rr564475 1039 bp proximal Snrnp200 Intron	SNP	A/G				A	A											A										G
rs29575143 MGI SNP Detail Alliance Variant	Chr2:127080976	Rr564475 1021 bp proximal Snrnp200 Intron	SNP	A/G				G	A											A										G
rs27434226 MGI SNP Detail Alliance Variant	Chr2:127081138	Rr564475 859 bp proximal Snrnp200 Intron	SNP	C/T		C			C	C		C		C			C								C					C	C			C					C	C				C		C												T
rs218069139 MGI SNP Detail Alliance Variant	Chr2:127081160	Rr564475 837 bp proximal Snrnp200 Intron	SNP	A/C	A	A	A		A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A		A	A	A	A	A	A	A	A	C	A	A	A	A
rs27434225 MGI SNP Detail Alliance Variant	Chr2:127081188	Rr564475 809 bp proximal Snrnp200 Intron	SNP	C/T		T		T	C	T		C		T			C			C										C	T			T					T	T				T		C												T
rs260892125 MGI SNP Detail Alliance Variant	Chr2:127081190	Rr564475 807 bp proximal Snrnp200 Intron	SNP	A/C	C	C	C		C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	A	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C		C	C	C	C	C	C	C	C	C	C	C	C	C
rs218190623 MGI SNP Detail Alliance Variant	Chr2:127081228	Rr564475 769 bp proximal Snrnp200 Intron	SNP	A/C	C	C	C		C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C		C	C	C	C	C	C	C	C	A	C	C	C	C
rs51217672 MGI SNP Detail Alliance Variant	Chr2:127081233	Rr564475 764 bp proximal Snrnp200 Intron	SNP	T				T
rs27434224 MGI SNP Detail Alliance Variant	Chr2:127081234	Rr564475 763 bp proximal Snrnp200 Intron	SNP	C/T				C	T	C		T		C											C						C			C					C	C				C														C
rs27434223 MGI SNP Detail Alliance Variant	Chr2:127081268	Rr564475 729 bp proximal Snrnp200 Intron	SNP	C/T		T		T	C	T		C		T			T			C					T					T	T			T					T					T		T												T
rs240779854 MGI SNP Detail Alliance Variant	Chr2:127081313	Rr564475 684 bp proximal Snrnp200 Intron	SNP	C/T	C	C	C		C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C		C	C	C	C	C	C	C	C	T	C	C	C	C
rs263787576 MGI SNP Detail Alliance Variant	Chr2:127081345	Rr564475 652 bp proximal Snrnp200 Intron	SNP	A/G	G	G	G		G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G		G	G	G	G	G	G	G	G	A	G	G	G	G
rs27434222 MGI SNP Detail Alliance Variant	Chr2:127081360	Rr564475 637 bp proximal Snrnp200 Intron	SNP	A/G		A			A	A		A		A			G								A					G	A			A					A	A				A		G												A
rs586728872 MGI SNP Detail Alliance Variant	Chr2:127081442	Rr564475 555 bp proximal Snrnp200 Intron	SNP	A/G	G	G	G		G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G		G	G	G	G	G	G	G	G	A	G	G	G	G
rs27434221 MGI SNP Detail Alliance Variant	Chr2:127081483	Rr564475 514 bp proximal Snrnp200 Intron	SNP	G/T		G			G	G		G		G			G								G					G	G			G					G	G				G		G												T
rs264754396 MGI SNP Detail Alliance Variant	Chr2:127081523	Rr564475 474 bp proximal Snrnp200 Intron	SNP	C/T	C	C	C		C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C		C	C	C	C	C	C	C	C	T	C	C	C	C
SNP ID (GRCm39)	Map Position (GRCm39)	Gene & Category	Variation Type	Allele Summary (all strains)	129P2/OlaHsd	129S1/SvImJ	129S5/SvEvBrd	129X1/SvJ	A/J	AKR/J	B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ	BALB/cByJ	BALB/cJ	BTBR T<+> Itpr3<tf>/J	BUB/BnJ	C3H/HeH	C3H/HeJ	C57BL/10J	C57BL/10SnJ	C57BL/6J	C57BL/6NJ	C57BR/cdJ	C57L/J	C58/J	CAST/EiJ	CBA/J	CE/J	CZECHII/EiJ	DBA/1J	DBA/2J	FVB/NJ	I/LnJ	JF1/MsJ	KK/HlJ	LEWES/EiJ	LG/J	LP/J	MA/MyJ	MOLF/EiJ	NOD/ShiLtJ	NON/ShiLtJ	NZB/BlNJ	NZO/HlLtJ	NZW/LacJ	PL/J	PWD/PhJ	PWK/PhJ	QSi3/Ianm	QSi5/Ianm	RF/J	RIIIS/J	SEA/GnJ	SJL/J	SM/J	SPRET/EiJ	ST/bJ	SWR/J	WSB/EiJ	ZALENDE/EiJ
rs223934275 MGI SNP Detail Alliance Variant	Chr2:127081531	Rr564475 466 bp proximal Snrnp200 Intron	SNP	C/T	C	C	C		T	C	T	T	T	C	C	T	T	T	T	T	T	T	T	C	C	T	C	T	T	T	C	T	T	C	T	T	C	T	C	C	T	C	C	C	T		T	T	C	T	T	T	C	T	T	C	C	T	T
rs581071150 MGI SNP Detail Alliance Variant	Chr2:127081568	Rr564475 429 bp proximal Snrnp200 Intron	SNP	A/G	G	G	G		G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G		G	G	G	G	G	G	G	G	A	G	G	G	G
rs243518501 MGI SNP Detail Alliance Variant	Chr2:127081601	Rr564475 396 bp proximal Snrnp200 Intron	SNP	A/T	A	A	A		A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	T	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A		A	A	A	A	A	A	A	A	A	A	A	A	A
rs29585109 MGI SNP Detail Alliance Variant	Chr2:127081648	Rr564475 349 bp proximal Snrnp200 Intron	SNP	C/T				T	T											T										C
rs226665220 MGI SNP Detail Alliance Variant	Chr2:127081678	Rr564475 319 bp proximal Snrnp200 Intron	SNP	G/T	G	G	G		G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G		G	G	G	G	G	G	G	G	T	G	G	G	G
rs27434220 MGI SNP Detail Alliance Variant	Chr2:127081907	Rr564475 90 bp proximal Snrnp200 Intron	SNP	C/T		C		C	T	C		T		C			C			T					C					C	C			C					C	C				C		C												C
rs13461731 MGI SNP Detail Alliance Variant	Chr2:127082066	Rr564475 within coordinates of Snrnp200 Coding-Synonymous	SNP	A/C		C		C	C	C		C		C			A			C					C					A	C			C					C	C				C		A												A
rs242920726 MGI SNP Detail Alliance Variant	Chr2:127082158	Rr564475 within coordinates of Snrnp200 mRNA-UTR	SNP	G/T	G	G	G		G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G		G	G	G	G	G	G	G	G	T	G	G	G	G
rs27434219 MGI SNP Detail Alliance Variant	Chr2:127082168	Rr564475 within coordinates of Snrnp200 mRNA-UTR	SNP	C/T		C			C	C		C		C			C								C					C	C			C					C	C				C		C												T
rs27434218 MGI SNP Detail Alliance Variant	Chr2:127082203	Rr564475 within coordinates of Snrnp200 mRNA-UTR	SNP	C/T		T			C	T		C		T			T			C					C					T	T			T					T	T				T		T												T
rs13461732 MGI SNP Detail Alliance Variant	Chr2:127082269	Rr564475 within coordinates of Snrnp200 mRNA-UTR	SNP	A/T		A			T	A		T		A			T								A					T	A			A					A	A				A		T												A
rs27434217 MGI SNP Detail Alliance Variant	Chr2:127082304	Rr564475 within coordinates of Snrnp200 mRNA-UTR	SNP	C/T		T			C	T		C		T			T			C										T	T			T						T				T		T
rs27434216 MGI SNP Detail Alliance Variant	Chr2:127082306	Rr564475 within coordinates of Snrnp200 mRNA-UTR	SNP	A/G					A			A																																														G
rs238082405 MGI SNP Detail Alliance Variant	Chr2:127082322	Rr564475 within coordinates of Snrnp200 mRNA-UTR	SNP	C/T	T	T	T		T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T		T	T	T	T	T	T	T	T	C	T	T	T	T
rs263470763 MGI SNP Detail Alliance Variant	Chr2:127082371	Rr564475 34 bp distal Snrnp200 mRNA-UTR	SNP	A/G	G	G			A	G	A	A	A	G	G	G	G	A	A	A	A	A	A	G	G	G	G	G	A	G	G	G	G	G	A	A	G	A	G	G	G	G	G	G	A		G	G	G	A	A	A	G	A	G	G	G	G	A
rs27434215 MGI SNP Detail	Chr2:127082405	Rr564475 68 bp distal	SNP	A/G		A			A	A		A		A			G								A					G	A			A					A							G												A
rs251749940 MGI SNP Detail	Chr2:127082438	Rr564475 101 bp distal	SNP	C/T	C	C	C		C	C	C	C	C	C	C	T	T	C	C	C	C	C	C	C	C	T	C	T	C	T	C	T	T	C	C	C	C	C	C	C	T	C	C	C	C		T	T	C	C	C	C	C	C	C	C	C		C
rs27434214 MGI SNP Detail	Chr2:127082490	Rr564475 153 bp distal	SNP	A/T		T			T	T		T		T			T													T	T			T					T	T				T		T												A
rs27434213 MGI SNP Detail	Chr2:127082523	Rr564475 186 bp distal	SNP	C/G		C			G	C		G		C			G								C					G	C			C						C				C		G												C
rs27434212 MGI SNP Detail	Chr2:127082549	Rr564475 212 bp distal	SNP	C/G		C			C	C		C		C			G								C					G	C			C					C	C				C		G												C
rs27434211 MGI SNP Detail	Chr2:127082601	Rr564475 264 bp distal	SNP	C/G		C			C	C		C		C											C						C			C					C	C				C		G												C
rs255971208 MGI SNP Detail	Chr2:127082636	Rr564475 299 bp distal	SNP	C/T	C	C	C		C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C		C	C	C	C	C	C	C	C	C	C	C	T	C
rs29818720 MGI SNP Detail	Chr2:127082655	Rr564475 318 bp distal	SNP	A/G				A	G											G
rs33557835 MGI SNP Detail	Chr2:127082666	Rr564475 329 bp distal	SNP	G/T				G	T											T
rs27434210 MGI SNP Detail	Chr2:127082733	Rr564475 396 bp distal	SNP	C/T		T			T	T		T		T			T								C					T	T			T					T	T				T		T												T
SNP ID (GRCm39)	Map Position (GRCm39)	Gene & Category	Variation Type	Allele Summary (all strains)	129P2/OlaHsd	129S1/SvImJ	129S5/SvEvBrd	129X1/SvJ	A/J	AKR/J	B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ	BALB/cByJ	BALB/cJ	BTBR T<+> Itpr3<tf>/J	BUB/BnJ	C3H/HeH	C3H/HeJ	C57BL/10J	C57BL/10SnJ	C57BL/6J	C57BL/6NJ	C57BR/cdJ	C57L/J	C58/J	CAST/EiJ	CBA/J	CE/J	CZECHII/EiJ	DBA/1J	DBA/2J	FVB/NJ	I/LnJ	JF1/MsJ	KK/HlJ	LEWES/EiJ	LG/J	LP/J	MA/MyJ	MOLF/EiJ	NOD/ShiLtJ	NON/ShiLtJ	NZB/BlNJ	NZO/HlLtJ	NZW/LacJ	PL/J	PWD/PhJ	PWK/PhJ	QSi3/Ianm	QSi5/Ianm	RF/J	RIIIS/J	SEA/GnJ	SJL/J	SM/J	SPRET/EiJ	ST/bJ	SWR/J	WSB/EiJ	ZALENDE/EiJ
rs27434209 MGI SNP Detail	Chr2:127082794	Rr564475 457 bp distal	SNP	C/T		C			C	C		C		C			T								C					T	C			C					C	C				C		T												C
rs252450449 MGI SNP Detail	Chr2:127082797	Rr564475 460 bp distal	SNP	A/G	G	G	G		G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G		G	G	G	G	G	G	G	G	A	G	G	G	G
rs212835906 MGI SNP Detail	Chr2:127082802	Rr564475 465 bp distal	SNP	A/G	G	G	G		G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G		G	G	G	G	G	G	G	G	A	G	G	G	G
rs29956449 MGI SNP Detail Alliance Variant	Chr2:127082921	Ciao1 mRNA-UTR Rr564475 584 bp distal	SNP	A/G				A	G											G										G
rs33172993 MGI SNP Detail Alliance Variant	Chr2:127082931	Ciao1 mRNA-UTR Rr564475 594 bp distal	SNP	A/T				A	T											T										T
rs51522277 MGI SNP Detail Alliance Variant	Chr2:127083005	Ciao1 mRNA-UTR Rr564475 668 bp distal	SNP	A/T				A	A																					T
rs245044231 MGI SNP Detail Alliance Variant	Chr2:127083016	Ciao1 mRNA-UTR Rr564475 679 bp distal	SNP	A/G	G	G	G		G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	A	G	G	G	G	G	G	G	G	A	G	G	G	G	G	G	G	G	G	G	G		G	G	G	G	G	G	G	G	G	G	G	G	G
rs4135957 MGI SNP Detail Alliance Variant	Chr2:127083087	Ciao1 mRNA-UTR Rr564475 750 bp distal	SNP	C/G		G		G	C											C										G
rs240081783 MGI SNP Detail Alliance Variant	Chr2:127083142	Ciao1 mRNA-UTR Rr564475 805 bp distal	SNP	A/G	A	A	A		A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	G	A	A	A	A	A	A	A	A	A	A	A	A	A	G	A	A	A	A	A	A		A	A	A	A	A	A	A	A	A	A	A	A	A
rs51922716 MGI SNP Detail Alliance Variant	Chr2:127083151	Ciao1 mRNA-UTR Rr564475 814 bp distal	SNP	A/T				A	T																					A
rs218324322 MGI SNP Detail Alliance Variant	Chr2:127083204	Ciao1 mRNA-UTR Rr564475 867 bp distal	SNP	C/T	C	C	C		C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C		C	C	C	C	C	C	C	C	T	C	C	C	C
rs578428820 MGI SNP Detail Alliance Variant	Chr2:127083244	Ciao1 mRNA-UTR Rr564475 907 bp distal	SNP	A/C	A	A	A		A	A	A	A	A	A	A		C	A	A	A	A	A	A	A	A	C	A	C	A	C	A	C	C	A	A	A	A	A	A	A	C	A	A	A	A		C	C	A	A	A	A	A	A	C	A	A	A	A
rs47515471 MGI SNP Detail Alliance Variant	Chr2:127083259	Ciao1 mRNA-UTR Rr564475 922 bp distal	SNP	C/T				C	C																					T
rs51356150 MGI SNP Detail Alliance Variant	Chr2:127083287	Ciao1 mRNA-UTR Rr564475 950 bp distal	SNP	C/T				C	C																					T
rs248464258 MGI SNP Detail Alliance Variant	Chr2:127083299	Ciao1 mRNA-UTR Rr564475 962 bp distal	SNP	C/G	G	G	G		C	G	C	C	C	G	G	C	C	C	C	C	C	C	C	G	G	C	G	C	C	C	G	C	C	G	C	C	G	C	G	G	C	G	G	G	C		C	C	G	C	C	C	G	C	C	G	G	G	C
rs218987184 MGI SNP Detail Alliance Variant	Chr2:127083360	Ciao1 mRNA-UTR Rr564475 1023 bp distal	SNP	A/T	A	A	A		A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A		A	A	A	A	A	A	A	A	T	A	A	A	A
rs237931777 MGI SNP Detail Alliance Variant	Chr2:127083404	Ciao1 mRNA-UTR Rr564475 1067 bp distal	SNP	A/G	G	G	G		G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G		G	G	G	G	G	G	G	G	A	G	G	G	G
rs49916696 MGI SNP Detail Alliance Variant	Chr2:127083426	Ciao1 mRNA-UTR Rr564475 1089 bp distal	SNP	A/G	G	G	G		G	G	G	G	G	G	G	A	A	G	G	G	G	G	G	G	G	A	G	A	G	A	G	A	A	G	G	G	G	G	G	G	A	G	G	G	G		A	A	G	G	G	G	G	G	G	G	G	G	G
rs223868045 MGI SNP Detail Alliance Variant	Chr2:127083471	Ciao1 mRNA-UTR Rr564475 1134 bp distal	SNP	C/T	C	C	C		C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C		C	C	C	C	C	C	C	C	T	C	C	C	C
rs33349750 MGI SNP Detail Alliance Variant	Chr2:127083475	Ciao1 mRNA-UTR Rr564475 1138 bp distal	SNP	A/G				G	A											A										A
rs263907829 MGI SNP Detail Alliance Variant	Chr2:127083487	Ciao1 mRNA-UTR Rr564475 1150 bp distal	SNP	C/T	T	T	T		T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	C	T	T	T	T	T	T	T	T	C	T	T	T	T	C	T	T	T	T	T	T		T	T	T	T	T	T	T	T	T	T	T	T	T
rs234771465 MGI SNP Detail Alliance Variant	Chr2:127083509	Ciao1 mRNA-UTR Rr564475 1172 bp distal	SNP	C/T	T	T	T		T	T	T	T	T	T	T		C	T	T	T	T	T	T	T	T	C	T	C	T	C	T	C	C	T	T	T	T	T	T	T	C	T	T	T	T		C	C	T	T	T	T	T	T	T	T	T	T	T
rs33218613 MGI SNP Detail Alliance Variant	Chr2:127083513	Ciao1 mRNA-UTR Rr564475 1176 bp distal	SNP	A/G				G	A											A
rs256690272 MGI SNP Detail Alliance Variant	Chr2:127083570	Ciao1 mRNA-UTR Rr564475 1233 bp distal	SNP	C/T	T	T	T		T	T	T	T	T	T	T	C	C	T	T	T	T	T	T	T	T	C	T	C	T	C	T	C	C	T	T	T	T	T	T	T	C	T	T	T	T		C	C	T	T	T	T	T	T	T	T	T	T	T
rs225658913 MGI SNP Detail Alliance Variant	Chr2:127083582	Ciao1 mRNA-UTR Rr564475 1245 bp distal	SNP	A/G	G	G	G		G	G	G	G	G	G	G	A	A	G	G	G	G	G	G	G	G	A	G	A	G	A	G	A	A	G	G	G	G	G	G	G	A	G	G	G	G		A	A	G	G	G	G	G	G	G	G	G	G	G
SNP ID (GRCm39)	Map Position (GRCm39)	Gene & Category	Variation Type	Allele Summary (all strains)	129P2/OlaHsd	129S1/SvImJ	129S5/SvEvBrd	129X1/SvJ	A/J	AKR/J	B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ	BALB/cByJ	BALB/cJ	BTBR T<+> Itpr3<tf>/J	BUB/BnJ	C3H/HeH	C3H/HeJ	C57BL/10J	C57BL/10SnJ	C57BL/6J	C57BL/6NJ	C57BR/cdJ	C57L/J	C58/J	CAST/EiJ	CBA/J	CE/J	CZECHII/EiJ	DBA/1J	DBA/2J	FVB/NJ	I/LnJ	JF1/MsJ	KK/HlJ	LEWES/EiJ	LG/J	LP/J	MA/MyJ	MOLF/EiJ	NOD/ShiLtJ	NON/ShiLtJ	NZB/BlNJ	NZO/HlLtJ	NZW/LacJ	PL/J	PWD/PhJ	PWK/PhJ	QSi3/Ianm	QSi5/Ianm	RF/J	RIIIS/J	SEA/GnJ	SJL/J	SM/J	SPRET/EiJ	ST/bJ	SWR/J	WSB/EiJ	ZALENDE/EiJ
rs27434208 MGI SNP Detail Alliance Variant	Chr2:127083643	Ciao1 mRNA-UTR Rr564475 1306 bp distal	SNP	A/C		A			A	A		A		A			A								A						A			A					A					A		A												C
rs33077917 MGI SNP Detail Alliance Variant	Chr2:127083694	Ciao1 mRNA-UTR Rr564475 1357 bp distal	SNP	A/G				G	A											A										G
rs215163693 MGI SNP Detail Alliance Variant	Chr2:127083704	Ciao1 mRNA-UTR Rr564475 1367 bp distal	SNP	A/C	A	A	A		A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A		A	A	A	A	A	A	A	A	C	A	A	A	A
rs231676561 MGI SNP Detail Alliance Variant	Chr2:127083705	Ciao1 mRNA-UTR Rr564475 1368 bp distal	SNP	C/T	T	T	T		T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	C	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T		T	T	T	T	T	T	T	T	T	T	T	T	T
rs29869457 MGI SNP Detail Alliance Variant	Chr2:127083708	Ciao1 mRNA-UTR Rr564475 1371 bp distal	SNP	A/C				C	A											A										C
rs218259918 MGI SNP Detail Alliance Variant	Chr2:127083709	Ciao1 mRNA-UTR Rr564475 1372 bp distal	SNP	A/G	G	G	G		G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G		G	G	G	G	G	G	G	G	A	G	G	G	G
rs243301100 MGI SNP Detail Alliance Variant	Chr2:127083829	Ciao1 mRNA-UTR Rr564475 1492 bp distal	SNP	A/G	G	G	G		G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G		G	G	G	G	G	G	G	G	A	G	G	G	G
rs48302491 MGI SNP Detail Alliance Variant	Chr2:127083946	Ciao1 mRNA-UTR Rr564475 1609 bp distal	SNP	A/G				A	G																					G
rs32977209 MGI SNP Detail Alliance Variant	Chr2:127083950	Ciao1 mRNA-UTR Rr564475 1613 bp distal	SNP	C/T				C	C																					T
rs231672629 MGI SNP Detail Alliance Variant	Chr2:127083958	Ciao1 mRNA-UTR Rr564475 1621 bp distal	SNP	C/T	C	C	C		C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C		C	C	C	C	C	C	C	C	C	C	C	T	C
rs3687363 MGI SNP Detail Alliance Variant	Chr2:127083989	Ciao1 mRNA-UTR Rr564475 1652 bp distal	SNP	G/T		T		T	G	T		G		T			G			G					T					G	T								T					T		G												G
rs3687875 MGI SNP Detail Alliance Variant	Chr2:127084035	Ciao1 mRNA-UTR Rr564475 1698 bp distal	SNP	A/G		A		A	G	A		G		A			A			G					A					A	A			A					A	A				A		A
rs3688486 MGI SNP Detail Alliance Variant	Chr2:127084127	Ciao1 mRNA-UTR Rr564475 1790 bp distal	SNP	A/G		A		A	G	A		G		A			G			G					A					G	A			A					A	A				A		G												G
rs49018581 MGI SNP Detail Alliance Variant	Chr2:127084181	Ciao1 mRNA-UTR Rr564475 1844 bp distal	SNP	G/T				G	G																					T
rs49588413 MGI SNP Detail Alliance Variant	Chr2:127084224	Ciao1 mRNA-UTR Rr564475 1887 bp distal	SNP	A/T				A	A																					T
rs46054614 MGI SNP Detail Alliance Variant	Chr2:127084231	Ciao1 mRNA-UTR Rr564475 1894 bp distal	SNP	C/T				C	C																					T
rs49309086 MGI SNP Detail Alliance Variant	Chr2:127084278	Ciao1 mRNA-UTR Rr564475 1941 bp distal	SNP	A/G				G	G																					A
rs3689197 MGI SNP Detail Alliance Variant	Chr2:127084286	Ciao1 mRNA-UTR Rr564475 1949 bp distal	SNP	C/T		T		T	C											C										T
rs27434207 MGI SNP Detail Alliance Variant	Chr2:127084317	Ciao1 mRNA-UTR Rr564475 1980 bp distal	SNP	C/G		C		C	C	C		C		C			G								G					G	C			C					G	C				C		G												C

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Contributing Projects: Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
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