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Mouse SNP Summary
Symbol
Name
ID
Rr564602
regulatory region 564602
MGI:8026734

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Showing SNP(s) 1 - 78 of 78

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SNP ID
(GRCm39)
Map Position
(GRCm39)
Gene & Category Variation
Type
Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
129X1/SvJ
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PL/J
PWD/PhJ
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs33397851
MGI SNP Detail
Alliance Variant
Chr2:127671787 Bub1 Intron
Rr564602 1982 bp proximal
SNP A/G A G
rs46756201
MGI SNP Detail
Alliance Variant
Chr2:127671806 Bub1 Intron
Rr564602 1963 bp proximal
SNP A/G G G A G
rs32951768
MGI SNP Detail
Alliance Variant
Chr2:127671840 Bub1 Intron
Rr564602 1929 bp proximal
SNP A/T T A
rs33372225
MGI SNP Detail
Alliance Variant
Chr2:127671857 Bub1 Intron
Rr564602 1912 bp proximal
SNP C/T T C
rs242920370
MGI SNP Detail
Alliance Variant
Chr2:127671912 Bub1 Intron
Rr564602 1857 bp proximal
SNP A/T A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A T A A A A
rs265076678
MGI SNP Detail
Alliance Variant
Chr2:127671969 Bub1 Intron
Rr564602 1800 bp proximal
SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs28269026
MGI SNP Detail
Alliance Variant
Chr2:127671970 Bub1 Intron
Rr564602 1799 bp proximal
SNP A/G G G G G G G G G G G G G A G
rs28269025
MGI SNP Detail
Alliance Variant
Chr2:127672024 Bub1 Intron
Rr564602 1745 bp proximal
SNP A/G G G G G A G A A G G A G G A G
rs215806564
MGI SNP Detail
Alliance Variant
Chr2:127672073 Bub1 Intron
Rr564602 1696 bp proximal
SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs234820922
MGI SNP Detail
Alliance Variant
Chr2:127672100 Bub1 Intron
Rr564602 1669 bp proximal
SNP A/T A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A T A A A A
rs28269024
MGI SNP Detail
Alliance Variant
Chr2:127672150 Bub1 Intron
Rr564602 1619 bp proximal
SNP A/G A A A G A A A A A
rs217540150
MGI SNP Detail
Alliance Variant
Chr2:127672243 Bub1 Intron
Rr564602 1526 bp proximal
SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs230134476
MGI SNP Detail
Alliance Variant
Chr2:127672363 Bub1 Intron
Rr564602 1406 bp proximal
SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs28269023
MGI SNP Detail
Alliance Variant
Chr2:127672405 Bub1 Intron
Rr564602 1364 bp proximal
SNP C/G C C C C C C C G C C G C
rs256553808
MGI SNP Detail
Alliance Variant
Chr2:127672504 Bub1 Intron
Rr564602 1265 bp proximal
SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs28269022
MGI SNP Detail
Alliance Variant
Chr2:127672509 Bub1 Intron
Rr564602 1260 bp proximal
SNP A/G G G G G G A G G G G G G G
rs33447019
MGI SNP Detail
Alliance Variant
Chr2:127672591 Bub1 Intron
Rr564602 1178 bp proximal
SNP A/G A A A G G G A
rs262735364
MGI SNP Detail
Alliance Variant
Chr2:127672716 Bub1 Intron
Rr564602 1053 bp proximal
SNP A/C C C C C C C C C C C C C C C C C C C A C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C
rs585818045
MGI SNP Detail
Alliance Variant
Chr2:127672744 Bub1 Intron
Rr564602 1025 bp proximal
SNP T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T
rs33684513
MGI SNP Detail
Alliance Variant
Chr2:127672790 Bub1 Intron
Rr564602 979 bp proximal
SNP A/G G G G G A
rs33206677
MGI SNP Detail
Alliance Variant
Chr2:127672861 Bub1 Intron
Rr564602 908 bp proximal
SNP C/T T T T C T C T
rs29624849
MGI SNP Detail
Alliance Variant
Chr2:127672959 Bub1 Intron
Rr564602 810 bp proximal
SNP A/G G G A G G G A
rs33485280
MGI SNP Detail
Alliance Variant
Chr2:127673063 Bub1 Intron
Rr564602 706 bp proximal
SNP A/G G G G A A A G
rs236616596
MGI SNP Detail
Alliance Variant
Chr2:127673150 Bub1 Intron
Rr564601 within coordinates of
Rr564602 619 bp proximal
SNP G/T G G G G G G G G G G G G G G G G G G G T G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G
rs262295705
MGI SNP Detail
Alliance Variant
Chr2:127673406 Bub1 Intron
Cpgi12232 within coordinates of
Rr564601 within coordinates of
Rr564602 363 bp proximal
SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
SNP ID
(GRCm39)
Map Position
(GRCm39)
Gene & Category Variation
Type
Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
129X1/SvJ
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PL/J
PWD/PhJ
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs231189862
MGI SNP Detail
Alliance Variant
Chr2:127673487 Bub1 Intron
Cpgi12232 within coordinates of
Rr564601 within coordinates of
Rr564602 282 bp proximal
SNP C/G C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C G C C C C
rs580132835
MGI SNP Detail
Alliance Variant
Chr2:127673511 Bub1 Intron
Cpgi12232 within coordinates of
Rr564601 within coordinates of
Rr564602 258 bp proximal
SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs33017735
MGI SNP Detail
Alliance Variant
Chr2:127673560 Bub1 Intron
Cpgi12232 within coordinates of
Rr564601 within coordinates of
Rr564602 209 bp proximal
SNP C/T C C C T
rs265700903
MGI SNP Detail
Alliance Variant
Chr2:127673570 Bub1 Intron
Cpgi12232 within coordinates of
Rr564601 within coordinates of
Rr564602 199 bp proximal
SNP A/C A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A C A A A A
rs228137834
MGI SNP Detail
Alliance Variant
Chr2:127673600 Bub1 Intron
Cpgi12232 within coordinates of
Rr564601 within coordinates of
Rr564602 169 bp proximal
SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs248050105
MGI SNP Detail
Alliance Variant
Chr2:127673698 Bub1 mRNA-UTR
Cpgi12232 within coordinates of
Rr397289 within coordinates of
Rr564601 within coordinates of
Rr564602 71 bp proximal
SNP A/C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C A C C C C
rs217635808
MGI SNP Detail
Alliance Variant
Chr2:127673728 Bub1 mRNA-UTR
Cpgi12232 within coordinates of
Rr397289 within coordinates of
Rr564601 within coordinates of
Rr564602 41 bp proximal
SNP A/C/T C C C C C C C C C C C C C C C C C C C A C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C
rs224379885
MGI SNP Detail
Alliance Variant
Chr2:127673731 Bub1 mRNA-UTR
Cpgi12232 within coordinates of
Rr397289 within coordinates of
Rr564601 within coordinates of
Rr564602 38 bp proximal
SNP C/T T T T T T T T T T T C T T T T T T T T C T C C C T C C T T T T C T T T T T C C T T T T T T C T T T T
rs254567449
MGI SNP Detail
Alliance Variant
Chr2:127673732 Bub1 mRNA-UTR
Cpgi12232 within coordinates of
Rr397289 within coordinates of
Rr564601 within coordinates of
Rr564602 37 bp proximal
SNP A/C A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A C A A A A
rs28269021
MGI SNP Detail
Alliance Variant
Chr2:127673789 Bub1 mRNA-UTR
Cpgi12232 within coordinates of
Rr397289 within coordinates of
Rr564602 within coordinates of
Tssr26147 within coordinates of
SNP A/C A A A A A C A A A A A A A
rs239266823
MGI SNP Detail
Chr2:127673914 Cpgi12232 within coordinates of
Rr397289 within coordinates of
Rr564602 within coordinates of
SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs28269020
MGI SNP Detail
Chr2:127673963 Cpgi12232 within coordinates of
Rr397289 within coordinates of
Rr564602 within coordinates of
SNP C/G C C C C G C G C C G C C G C
rs216233010
MGI SNP Detail
Chr2:127674000 Rr564602 within coordinates of
SNP G/T G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G T G G G G
rs234030129
MGI SNP Detail
Chr2:127674031 Rr564602 within coordinates of
SNP A/T T T T T T T T T T T T T T T T T T T A T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T
rs108172640
MGI SNP Detail
Chr2:127674032 Rr564602 within coordinates of
SNP A/T A A T
rs217792216
MGI SNP Detail
Chr2:127674093 Rr564602 within coordinates of
SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs241913539
MGI SNP Detail
Chr2:127674129 Rr564602 within coordinates of
SNP G/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T G T T T T
rs261868458
MGI SNP Detail
Chr2:127674159 Rr564602 within coordinates of
SNP G/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T G T T T T
rs223270458
MGI SNP Detail
Chr2:127674304 Rr564602 29 bp distal
SNP A/C A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A C A A A A
rs247598393
MGI SNP Detail
Chr2:127674328 Rr564602 53 bp distal
SNP C/T C C C C C C C C C C T C C C C C C C T T C T T T C T T C T C C C T C C C C C T T C C C C C C C T C C C C
rs579715461
MGI SNP Detail
Chr2:127674347 Rr564602 72 bp distal
SNP A/C A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A C A A A A
rs583014302
MGI SNP Detail
Chr2:127674395 Rr564602 120 bp distal
SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs28269019
MGI SNP Detail
Chr2:127674450 Rr564602 175 bp distal
SNP A/G A A A A A A A A A A A A A G
rs228525578
MGI SNP Detail
Chr2:127674655 Rr564602 380 bp distal
SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs28269018
MGI SNP Detail
Chr2:127674656 Rr564602 381 bp distal
SNP C/T C C C C C T C C C C C C C C
SNP ID
(GRCm39)
Map Position
(GRCm39)
Gene & Category Variation
Type
Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
129X1/SvJ
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PL/J
PWD/PhJ
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs48972693
MGI SNP Detail
Chr2:127674718 Rr564602 443 bp distal
SNP A/C A A C
rs224411600
MGI SNP Detail
Chr2:127674758 Rr564602 483 bp distal
SNP A/C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C A C C C C
rs28269017
MGI SNP Detail
Chr2:127674834 Rr564602 559 bp distal
SNP C/T C C C C C T C C T C C C C T C
rs28269016
MGI SNP Detail
Chr2:127674849 Rr564602 574 bp distal
SNP C/T C C C C C C C C C C C C C T
rs587445368
MGI SNP Detail
Chr2:127675039 Rr564602 764 bp distal
SNP A/G G G G G G G G G G G G G G G G G G G G A G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G
rs29866267
MGI SNP Detail
Chr2:127675145 Rr564602 870 bp distal
SNP A/T T T T A
rs257589222
MGI SNP Detail
Chr2:127675197 Rr564602 922 bp distal
SNP C/T C C C C C C C C C C T T C C C C C C C C T C C T T C T T C C C C C T C C C C C T T C C C C C C C C C C C C
rs580628620
MGI SNP Detail
Chr2:127675206 Rr564602 931 bp distal
SNP A/G G G G G G G G G G G G G G G G G G G G A G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G
rs33485677
MGI SNP Detail
Chr2:127675222 Rr564602 947 bp distal
SNP A/T T T T A
rs234724905
MGI SNP Detail
Chr2:127675300 Rr564602 1025 bp distal
SNP G/T G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G T G G G G
rs247161283
MGI SNP Detail
Chr2:127675306 Rr564602 1031 bp distal
SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs211763625
MGI SNP Detail
Chr2:127675342 Rr564602 1067 bp distal
SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs236812093
MGI SNP Detail
Chr2:127675369 Rr564602 1094 bp distal
SNP A/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T A T T T T
rs256869528
MGI SNP Detail
Chr2:127675468 Rr564602 1193 bp distal
SNP A/G G G G G G G G G G G G G G G G G G G G A G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G
rs29500838
MGI SNP Detail
Chr2:127675531 Rr564602 1256 bp distal
SNP G/T T T G
rs32976555
MGI SNP Detail
Chr2:127675549 Rr564602 1274 bp distal
SNP C/T T T T C
rs253488745
MGI SNP Detail
Chr2:127675569 Rr564602 1294 bp distal
SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs33764343
MGI SNP Detail
Chr2:127675585 Rr564602 1310 bp distal
SNP A/G A A A G
rs242716694
MGI SNP Detail
Chr2:127675665 Rr564602 1390 bp distal
SNP A/G A A A A A A A A A A A A A A A A A A A G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A
rs29770343
MGI SNP Detail
Chr2:127675715 Rr564602 1440 bp distal
SNP C/G G G G G C
rs107861784
MGI SNP Detail
Chr2:127675766 Rr564602 1491 bp distal
SNP C/G G C
rs28269015
MGI SNP Detail
Chr2:127675798 Rr564602 1523 bp distal
SNP A/G A A G A G A G G G G A A G A A G G
rs28269014
MGI SNP Detail
Chr2:127676070 Rr564602 1795 bp distal
SNP C/T T T T T T T C T C C T T T T C T
rs231379153
MGI SNP Detail
Chr2:127676076 Rr564602 1801 bp distal
SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs33162805
MGI SNP Detail
Chr2:127676093 Rr564602 1818 bp distal
SNP C/G C C C C G
SNP ID
(GRCm39)
Map Position
(GRCm39)
Gene & Category Variation
Type
Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
129X1/SvJ
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PL/J
PWD/PhJ
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs258378312
MGI SNP Detail
Chr2:127676186 Rr564602 1911 bp distal
SNP A/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T A T T T T
rs33676415
MGI SNP Detail
Chr2:127676234 Rr564602 1959 bp distal
SNP C/G C C C G C G C
rs33650696
MGI SNP Detail
Chr2:127676275 Rr564602 2000 bp distal
SNP C/G C C C C G
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Showing SNP(s) 1 - 78 of 78

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
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last database update
03/18/2025
MGI 6.24
The Jackson Laboratory

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