About   Help   FAQ
Mouse SNP Summary
Symbol
Name
ID
Rr564886
regulatory region 564886
MGI:8027018

<< first < prev12 next > last >>
Showing SNP(s) 1 - 100 of 145

Your search exceeds the maximum result limit of 100,000 SNPs that can be displayed or exported to text. Use filters to refine your search or select a sub-region from the SNP Density Heatmap.
Loading...
Show only selected strains with alleles     Show all selected strains    
Drag columns to re-order.   Column order is reset with Filter or Show option change.
SNP ID
(GRCm39)
Map Position
(GRCm39)
Gene & Category Variation
Type
Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
129X1/SvJ
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PL/J
PWD/PhJ
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs586637634
MGI SNP Detail
Chr2:129079086 Rr564886 1991 bp proximal
SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs52460183
MGI SNP Detail
Chr2:129079118 Rr564886 1959 bp proximal
SNP C/T C C T
rs223697111
MGI SNP Detail
Chr2:129079143 Rr564886 1934 bp proximal
SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G
rs237576314
MGI SNP Detail
Chr2:129079144 Rr564886 1933 bp proximal
SNP A/C A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A C A
rs49767189
MGI SNP Detail
Chr2:129079172 Rr564886 1905 bp proximal
SNP C/T T C C C T
rs222624806
MGI SNP Detail
Chr2:129079219 Rr564886 1858 bp proximal
SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs52433467
MGI SNP Detail
Chr2:129079346 Rr564886 1731 bp proximal
SNP C/G C G C G C
rs265530196
MGI SNP Detail
Chr2:129079363 Rr564886 1714 bp proximal
SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs27415012
MGI SNP Detail
Chr2:129079406 Rr564886 1671 bp proximal
SNP C/G G G G G G G G G C G G G G C G
rs240986620
MGI SNP Detail
Chr2:129079415 Rr564886 1662 bp proximal
SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs27415011
MGI SNP Detail
Chr2:129079431 Rr564886 1646 bp proximal
SNP A/G A G A A G A A A G
rs581622647
MGI SNP Detail
Chr2:129079535 Rr564886 1542 bp proximal
SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T
rs585216964
MGI SNP Detail
Chr2:129079538 Rr564886 1539 bp proximal
SNP C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C
rs216056787
MGI SNP Detail
Chr2:129079563 Rr564886 1514 bp proximal
SNP A/C A C
rs231159503
MGI SNP Detail
Chr2:129079608 Rr564886 1469 bp proximal
SNP A/C A A A A A A A A A A A A C A C A
rs251932634
MGI SNP Detail
Chr2:129079631 Rr564886 1446 bp proximal
SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs215590815
MGI SNP Detail
Chr2:129079664 Rr564886 1413 bp proximal
SNP A/G G G A G A G G G G G A A A A A A G G G G A A A G A A G A A G A A G G G G G A A G G A G G G G G G G A G
rs235292984
MGI SNP Detail
Chr2:129079688 Rr564886 1389 bp proximal
SNP A/C A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A C A A A A
rs255022316
MGI SNP Detail
Chr2:129079689 Rr564886 1388 bp proximal
SNP A/T A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A T A A A A
rs211886237
MGI SNP Detail
Chr2:129079716 Rr564886 1361 bp proximal
SNP C/T C C C C C C C C C C C C C C C C C C C C T T T C T C C C C C C T C C C C C T T C C C C C C C C C C C
rs234901806
MGI SNP Detail
Chr2:129079726 Rr564886 1351 bp proximal
SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs261724447
MGI SNP Detail
Chr2:129079740 Rr564886 1337 bp proximal
SNP C/T C C C C C C C C C C C C C C C C C C C T T T C T C C C C C C T C C C C C T T C C C C C C C C C C C
rs222903883
MGI SNP Detail
Chr2:129079752 Rr564886 1325 bp proximal
SNP A/C C C C C C C C C A C C C C C A C C
rs247282346
MGI SNP Detail
Chr2:129079758 Rr564886 1319 bp proximal
SNP A/C A A C A C A A A A C C C C C C A A A A A A A A C A C C A C A A A A A A A A A C A A A A A C
rs259041682
MGI SNP Detail
Chr2:129079764 Rr564886 1313 bp proximal
SNP A/C A A C C A A A C C C C C C A A A A A A A A A C A C C A C A A A A A A A A A A C A A A A A C
SNP ID
(GRCm39)
Map Position
(GRCm39)
Gene & Category Variation
Type
Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
129X1/SvJ
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PL/J
PWD/PhJ
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs221480470
MGI SNP Detail
Chr2:129079771 Rr564886 1306 bp proximal
SNP A/C C C C C C C C C C C C C C C C C C C C C C A A A C A C C C C C C A C C C C C A C C C C C C C C C
rs240951576
MGI SNP Detail
Chr2:129079846 Rr564886 1231 bp proximal
SNP A/C A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A C A A A A
rs236941643
MGI SNP Detail
Chr2:129079930 Rr564886 1147 bp proximal
SNP A/G G A
rs255249005
MGI SNP Detail
Chr2:129079941 Rr564886 1136 bp proximal
SNP C/T T C
rs386929777
MGI SNP Detail
Chr2:129080003 Rr564886 1074 bp proximal
SNP A/G A G A G A A A A A G G G G G G A A A A G G G A G G A G A G G A A A A G G A A A A A G A A G A
rs584845743
MGI SNP Detail
Chr2:129080112 Rr564886 965 bp proximal
SNP A/G A A A A A A A A G G G G A A G G A G
rs52125840
MGI SNP Detail
Chr2:129080123 Rr564886 954 bp proximal
SNP A/G G G G G G G G G A A A A G G G A A G G
rs582054588
MGI SNP Detail
Chr2:129080125 Rr564886 952 bp proximal
SNP A/G G G G G G G G G G A A A G G G A A G G G
rs52133017
MGI SNP Detail
Chr2:129080130 Rr564886 947 bp proximal
SNP A/G G G G G G G G G A A A A G G G G A A A A G G
rs265044357
MGI SNP Detail
Chr2:129080180 Rr564886 897 bp proximal
SNP A/G G G G G G G G G G G G G G G G G G G G G G G A A A G A G G G G G G A G G G G G A A G G G G G G G G G G G G
rs27415010
MGI SNP Detail
Chr2:129080192 Rr564886 885 bp proximal
SNP A/G A G A A G A A A A A G
rs27415009
MGI SNP Detail
Chr2:129080198 Rr564886 879 bp proximal
SNP A/G A G A A A A G A A A G
rs215923114
MGI SNP Detail
Chr2:129080215 Rr564886 862 bp proximal
SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs228363192
MGI SNP Detail
Chr2:129080234 Rr564886 843 bp proximal
SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs49573874
MGI SNP Detail
Chr2:129080329 Rr564886 748 bp proximal
SNP A/G G A
rs211794719
MGI SNP Detail
Chr2:129080364 Rr564886 713 bp proximal
SNP A/G G G G G G G G G G G G G G G G G G G G A G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G
rs237010448
MGI SNP Detail
Chr2:129080376 Rr564886 701 bp proximal
SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs250514693
MGI SNP Detail
Chr2:129080378 Rr564886 699 bp proximal
SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs27415008
MGI SNP Detail
Chr2:129080388 Rr564886 689 bp proximal
SNP C/T C T C C C C C C T C C T C T
rs50394464
MGI SNP Detail
Chr2:129080473 Rr564886 604 bp proximal
SNP C/T T C T C T
rs48627279
MGI SNP Detail
Chr2:129080475 Rr564886 602 bp proximal
SNP C/T C T T T C
rs46260232
MGI SNP Detail
Chr2:129080489 Rr564886 588 bp proximal
SNP A/G A G G G A
rs234347474
MGI SNP Detail
Chr2:129080543 Rr564886 534 bp proximal
SNP A/C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C A C C C C
rs49711039
MGI SNP Detail
Chr2:129080548 Rr564886 529 bp proximal
SNP C/T C C T
rs50017914
MGI SNP Detail
Chr2:129080595 Rr564886 482 bp proximal
SNP C/T T C T C T
SNP ID
(GRCm39)
Map Position
(GRCm39)
Gene & Category Variation
Type
Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
129X1/SvJ
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PL/J
PWD/PhJ
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs49579512
MGI SNP Detail
Chr2:129080621 Rr564886 456 bp proximal
SNP C/T C T C T C
rs262479850
MGI SNP Detail
Chr2:129080732 Rr564886 345 bp proximal
SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs47867584
MGI SNP Detail
Chr2:129080770 Rr564886 307 bp proximal
SNP A/G G A G A G
rs584165528
MGI SNP Detail
Chr2:129080807 Rr564886 270 bp proximal
SNP A/C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C A C C C C
rs46509344
MGI SNP Detail
Chr2:129080827 Rr564886 250 bp proximal
SNP A/G A A G
rs259845898
MGI SNP Detail
Chr2:129080850 Rr564886 227 bp proximal
SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs219051467
MGI SNP Detail
Chr2:129080869 Rr564886 208 bp proximal
SNP C/T C T
rs248447121
MGI SNP Detail
Chr2:129080976 Rr564886 101 bp proximal
SNP A/C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C A C C C C
rs27415007
MGI SNP Detail
Chr2:129080997 Rr564886 80 bp proximal
SNP C/T C T C C C C C C T C C C T
rs259572741
MGI SNP Detail
Chr2:129081021 Rr564886 56 bp proximal
SNP A/G A G
rs47036034
MGI SNP Detail
Chr2:129081055 Rr564886 22 bp proximal
SNP G/T T T G
rs214562137
MGI SNP Detail
Chr2:129081059 Rr564886 18 bp proximal
SNP A/C C C C C C C C C C C C C C C C C C C C A C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C
rs228083929
MGI SNP Detail
Chr2:129081080 Rr564886 within coordinates of
SNP A/G G A
rs245528914
MGI SNP Detail
Chr2:129081094 Rr564886 within coordinates of
SNP A/G A A A G A G A A A A A A G G G G G G A G A A G G G A G G A G G A G G A A A A A G G A A G A A A A G A A G A
rs216243960
MGI SNP Detail
Chr2:129081095 Rr564886 within coordinates of
SNP G/T G G G T G T G G G G G G T T T T T T G G G G T T T G T T G T T G T T G G G G G T T G G T G G G G T G G T G
rs27415006
MGI SNP Detail
Chr2:129081118 Rr564886 within coordinates of
SNP A/G A G A A A G A A G G
rs27415005
MGI SNP Detail
Chr2:129081120 Rr564886 within coordinates of
SNP C/G C G G G G C C
rs27415004
MGI SNP Detail
Chr2:129081163 Rr564886 within coordinates of
SNP A/C C A C C C C C A A
rs257987543
MGI SNP Detail
Chr2:129081201 Rr564886 within coordinates of
SNP C/T T C
rs51299861
MGI SNP Detail
Chr2:129081207 Rr564886 within coordinates of
SNP C/T T C T C
rs48378470
MGI SNP Detail
Chr2:129081219 Rr564886 within coordinates of
SNP A/G G A G
rs48888794
MGI SNP Detail
Chr2:129081293 Rr564886 1 bp distal
SNP A/G G A
rs47895112
MGI SNP Detail
Chr2:129081299 Rr564886 7 bp distal
SNP G/T G G T
rs46583944
MGI SNP Detail
Chr2:129081306 Rr564886 14 bp distal
SNP A/C C C A
rs231039198
MGI SNP Detail
Chr2:129081335 Rr564886 43 bp distal
SNP C/T C T
SNP ID
(GRCm39)
Map Position
(GRCm39)
Gene & Category Variation
Type
Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
129X1/SvJ
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PL/J
PWD/PhJ
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs250634073
MGI SNP Detail
Chr2:129081346 Rr564886 54 bp distal
SNP A/G G A
rs47808969
MGI SNP Detail
Chr2:129081364 Rr564886 72 bp distal
SNP C/T C T C T C
rs51205169
MGI SNP Detail
Chr2:129081481 Rr564886 189 bp distal
SNP C/G G C
rs27415003
MGI SNP Detail
Chr2:129081533 Rr564886 241 bp distal
SNP C/T T T T T T T C T T T T C T
rs51911394
MGI SNP Detail
Chr2:129081551 Rr564886 259 bp distal
SNP C/T T C C C T
rs231462779
MGI SNP Detail
Chr2:129081589 Rr564886 297 bp distal
SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs27415002
MGI SNP Detail
Chr2:129081590 Rr564886 298 bp distal
SNP C/T C C C C C T C C C C C C
rs27415001
MGI SNP Detail
Chr2:129081601 Rr564886 309 bp distal
SNP A/G G G G G G G G G A G G G A G
rs228782549
MGI SNP Detail
Chr2:129081602 Rr564886 310 bp distal
SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs51459787
MGI SNP Detail
Chr2:129081658 Rr564886 366 bp distal
SNP C/T C C T C
rs217512539
MGI SNP Detail
Chr2:129081703 Rr564886 411 bp distal
SNP A/G G A
rs237311162
MGI SNP Detail
Chr2:129081718 Rr564886 426 bp distal
SNP C/T C C C C C C C C C C C C C C C C C C C T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C
rs239634744
MGI SNP Detail
Chr2:129081724 Rr564886 432 bp distal
SNP C/T C T
rs45696798
MGI SNP Detail
Chr2:129081778 Rr564886 486 bp distal
SNP C/T C C T C
rs234174898
MGI SNP Detail
Chr2:129081803 Rr564886 511 bp distal
SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs47409319
MGI SNP Detail
Chr2:129081805 Rr564886 513 bp distal
SNP C/T T C
rs107754179
MGI SNP Detail
Chr2:129081811 Rr564886 519 bp distal
SNP A/C A C C C A
rs108572470
MGI SNP Detail
Chr2:129081815 Rr564886 523 bp distal
SNP C/T C C T C
rs260831941
MGI SNP Detail
Chr2:129081824 Rr564886 532 bp distal
SNP C/T C C C C C C C C C C C C C C C C C C C C C C T T T C T C C C C C C C C C C T T C C C C C C C C C C C C
rs51003613
MGI SNP Detail
Chr2:129081870 Rr564886 578 bp distal
SNP G/T G G T G
rs29504937
MGI SNP Detail
Chr2:129081900 Rr564886 608 bp distal
SNP C/T T C C C C T
rs262626353
MGI SNP Detail
Chr2:129082013 Rr564886 721 bp distal
SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs226558681
MGI SNP Detail
Chr2:129082032 Rr564886 740 bp distal
SNP A/C A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A C A A A A
rs27415000
MGI SNP Detail
Chr2:129082045 Rr564886 753 bp distal
SNP C/T T T T T T T C T T T T T T
rs27414999
MGI SNP Detail
Chr2:129082070 Rr564886 778 bp distal
SNP C/T C C C C C C C T C C C T C
<< first < prev12 next > last >>
Showing SNP(s) 1 - 100 of 145

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
Citing These Resources
Funding Information
Warranty Disclaimer, Privacy Notice, Licensing, & Copyright
Send questions and comments to User Support.
last database update
03/25/2025
MGI 6.24
The Jackson Laboratory