About   Help   FAQ
Mouse SNP Summary
Symbol
Name
ID 		Rr566762
regulatory region 566762
MGI:8028894

<< first < prev1 next > last >>
Showing SNP(s) 1 - 89 of 89

Your search exceeds the maximum result limit of 100,000 SNPs that can be displayed or exported to text. Use filters to refine your search or select a sub-region from the SNP Density Heatmap.
Loading...
Show only selected strains with alleles     Show all selected strains    
Drag columns to re-order.   Column order is reset with Filter or Show option change.
SNP ID
(GRCm39)		 Map Position
(GRCm39)		 Gene & Category Variation
Type		 Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
129X1/SvJ
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PL/J
PWD/PhJ
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs243716538
MGI SNP Detail
Alliance Variant		 Chr2:147018886 Nkx2-2 Coding-NonSynonymous
Nkx2-2 Noncoding-Transcript-Variant
Rr566762 1990 bp proximal
 SNP G G G
rs219458571
MGI SNP Detail
Alliance Variant		 Chr2:147018898 Nkx2-2 Coding-Synonymous
Nkx2-2 Noncoding-Transcript-Variant
Rr566762 1978 bp proximal
 SNP G G G
rs242229457
MGI SNP Detail
Alliance Variant		 Chr2:147018908 Nkx2-2 Coding-NonSynonymous
Nkx2-2 Noncoding-Transcript-Variant
Rr566762 1968 bp proximal
 SNP C C C
rs387533796
MGI SNP Detail
Alliance Variant		 Chr2:147019023 Nkx2-2 Intron
Nkx2-2 mRNA-UTR
Nkx2-2 Noncoding-Transcript-Variant
Rr566762 1853 bp proximal
 SNP A/G A A A G A A G G A G G A A A A A A A G G A A A A G G A A G G A G G G G A G A G A G G G G G G G A G G G G
rs50781385
MGI SNP Detail
Alliance Variant		 Chr2:147019071 Nkx2-2 Intron
Nkx2-2 mRNA-UTR
Nkx2-2 Noncoding-Transcript-Variant
Rr566762 1805 bp proximal
 SNP A/T T T T A T T A A T T A A T T T T T T T T A T T T T A A T T T A T A T T T T A T A T A T A T A T T T A A T
rs45896448
MGI SNP Detail
Alliance Variant		 Chr2:147019131 Nkx2-2 Intron
Nkx2-2 mRNA-UTR
Nkx2-2 Noncoding-Transcript-Variant
Rr566762 1745 bp proximal
 SNP C/T T C
rs253946558
MGI SNP Detail
Alliance Variant		 Chr2:147019148 Nkx2-2 Intron
Nkx2-2 mRNA-UTR
Nkx2-2 Noncoding-Transcript-Variant
Rr566762 1728 bp proximal
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs217874585
MGI SNP Detail
Alliance Variant		 Chr2:147019167 Nkx2-2 Intron
Nkx2-2 mRNA-UTR
Nkx2-2 Noncoding-Transcript-Variant
Rr566762 1709 bp proximal
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs50079262
MGI SNP Detail
Alliance Variant		 Chr2:147019181 Nkx2-2 Intron
Nkx2-2 mRNA-UTR
Nkx2-2 Noncoding-Transcript-Variant
Rr566762 1695 bp proximal
 SNP G G G
rs48997712
MGI SNP Detail
Alliance Variant		 Chr2:147019186 Nkx2-2 Intron
Nkx2-2 mRNA-UTR
Nkx2-2 Noncoding-Transcript-Variant
Rr566762 1690 bp proximal
 SNP C C C
rs215622045
MGI SNP Detail
Alliance Variant		 Chr2:147019221 Nkx2-2 Intron
Nkx2-2 mRNA-UTR
Nkx2-2 Noncoding-Transcript-Variant
Rr566762 1655 bp proximal
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs33707069
MGI SNP Detail
Alliance Variant		 Chr2:147019401 Nkx2-2 Intron
Nkx2-2 mRNA-UTR
Nkx2-2 Noncoding-Transcript-Variant
Rr566762 1475 bp proximal
 SNP C/T T C T C C
rs218939619
MGI SNP Detail
Alliance Variant		 Chr2:147019478 Nkx2-2 Intron
Nkx2-2 mRNA-UTR
Nkx2-2 Noncoding-Transcript-Variant
Rr566762 1398 bp proximal
 SNP A/T T A
rs29773728
MGI SNP Detail
Alliance Variant		 Chr2:147019509 Nkx2-2 Intron
Nkx2-2 mRNA-UTR
Nkx2-2 Noncoding-Transcript-Variant
Rr566762 1367 bp proximal
 SNP A/G A G A G A
rs264114843
MGI SNP Detail
Alliance Variant		 Chr2:147019544 Nkx2-2 Intron
Nkx2-2 mRNA-UTR
Nkx2-2 Noncoding-Transcript-Variant
Rr566759 within coordinates of
Rr566762 1332 bp proximal
 SNP A/G A G
rs225546397
MGI SNP Detail
Alliance Variant		 Chr2:147019552 Nkx2-2 Intron
Nkx2-2 mRNA-UTR
Nkx2-2 Noncoding-Transcript-Variant
Rr566759 within coordinates of
Rr566762 1324 bp proximal
 SNP C/T T C
rs248582984
MGI SNP Detail
Alliance Variant		 Chr2:147019558 Nkx2-2 Intron
Nkx2-2 mRNA-UTR
Nkx2-2 Noncoding-Transcript-Variant
Rr566759 within coordinates of
Rr566762 1318 bp proximal
 SNP C/G G C
rs226107320
MGI SNP Detail
Alliance Variant		 Chr2:147019598 Nkx2-2 Intron
Nkx2-2 mRNA-UTR
Nkx2-2 Noncoding-Transcript-Variant
Rr566759 within coordinates of
Rr566762 1278 bp proximal
 SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs50425189
MGI SNP Detail
Alliance Variant		 Chr2:147019602 Nkx2-2 Intron
Nkx2-2 mRNA-UTR
Nkx2-2 Noncoding-Transcript-Variant
Rr566759 within coordinates of
Rr566762 1274 bp proximal
 SNP A/C C C A
rs33339130
MGI SNP Detail
Alliance Variant		 Chr2:147019611 Nkx2-2 Intron
Nkx2-2 mRNA-UTR
Nkx2-2 Noncoding-Transcript-Variant
Rr566759 within coordinates of
Rr566762 1265 bp proximal
 SNP A/G G A G A G
rs33122231
MGI SNP Detail
Alliance Variant		 Chr2:147019692 Nkx2-2 Coding-Synonymous
Nkx2-2 Intron
Nkx2-2 Noncoding-Transcript-Variant
Rr566759 within coordinates of
Rr566762 1184 bp proximal
 SNP C/T C T C T C
rs256735751
MGI SNP Detail
Alliance Variant		 Chr2:147019735 Nkx2-2 Coding-NonSynonymous
Nkx2-2 Intron
Nkx2-2 Noncoding-Transcript-Variant
Rr566759 within coordinates of
Rr566762 1141 bp proximal
 SNP A/G A G
rs224131104
MGI SNP Detail
Alliance Variant		 Chr2:147019762 Nkx2-2 Coding-NonSynonymous
Nkx2-2 Intron
Nkx2-2 Noncoding-Transcript-Variant
Rr566759 within coordinates of
Rr566762 1114 bp proximal
 SNP A/T A T
rs33639760
MGI SNP Detail
Alliance Variant		 Chr2:147019781 Nkx2-2 Coding-NonSynonymous
Nkx2-2 Intron
Nkx2-2 Noncoding-Transcript-Variant
Rr566759 within coordinates of
Rr566762 1095 bp proximal
 SNP C/G G C G C C
rs33592874
MGI SNP Detail
Alliance Variant		 Chr2:147019921 Nkx2-2 Intron
Nkx2-2 mRNA-UTR
Nkx2-2 Noncoding-Transcript-Variant
Rr566759 within coordinates of
Rr566762 955 bp proximal
 SNP C/T T T C T
SNP ID
(GRCm39)		 Map Position
(GRCm39)		 Gene & Category Variation
Type		 Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
129X1/SvJ
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PL/J
PWD/PhJ
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs32878425
MGI SNP Detail
Alliance Variant		 Chr2:147019964 Nkx2-2 Intron
Nkx2-2 mRNA-UTR
Nkx2-2 Noncoding-Transcript-Variant
Rr566759 within coordinates of
Rr566762 912 bp proximal
 SNP C/G G G C G
rs580785409
MGI SNP Detail
Alliance Variant		 Chr2:147019973 Nkx2-2 Intron
Nkx2-2 mRNA-UTR
Nkx2-2 Noncoding-Transcript-Variant
Rr566759 within coordinates of
Rr566762 903 bp proximal
 SNP C/T T T T T T T T T T T T T T T T T T T T C T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T
rs584141905
MGI SNP Detail
Alliance Variant		 Chr2:147019977 Nkx2-2 Intron
Nkx2-2 mRNA-UTR
Nkx2-2 Noncoding-Transcript-Variant
Rr566759 within coordinates of
Rr566762 899 bp proximal
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs265879244
MGI SNP Detail
Alliance Variant		 Chr2:147020014 Nkx2-2 Intron
Nkx2-2 mRNA-UTR
Nkx2-2 Noncoding-Transcript-Variant
Rr566759 within coordinates of
Rr566762 862 bp proximal
 SNP A/C C A
rs224153967
MGI SNP Detail
Alliance Variant		 Chr2:147020060 Nkx2-2 Intron
Nkx2-2 mRNA-UTR
Nkx2-2 Noncoding-Transcript-Variant
Rr566759 within coordinates of
Rr566762 816 bp proximal
 SNP A/G G G G G G G G G G G G G G G G G G G G A G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G
rs233299068
MGI SNP Detail
Alliance Variant		 Chr2:147020091 Nkx2-2 Intron
Nkx2-2 mRNA-UTR
Nkx2-2 Noncoding-Transcript-Variant
Rr566759 within coordinates of
Rr566762 785 bp proximal
 SNP C/T T C
rs33459651
MGI SNP Detail
Alliance Variant		 Chr2:147020162 Nkx2-2 Intron
Nkx2-2 mRNA-UTR
Nkx2-2 Noncoding-Transcript-Variant
Rr566759 within coordinates of
Rr566762 714 bp proximal
 SNP C/T T T C T C C
rs33761385
MGI SNP Detail
Alliance Variant		 Chr2:147020282 Cpgi12376 within coordinates of
Nkx2-2 Intron
Nkx2-2 mRNA-UTR
Nkx2-2 Noncoding-Transcript-Variant
Rr566759 within coordinates of
Rr566762 594 bp proximal
 SNP A/G A A G A G G
rs232183431
MGI SNP Detail
Alliance Variant		 Chr2:147020295 Cpgi12376 within coordinates of
Nkx2-2 Intron
Nkx2-2 mRNA-UTR
Nkx2-2 Noncoding-Transcript-Variant
Rr566759 within coordinates of
Rr566762 581 bp proximal
 SNP C/T T C
rs244226437
MGI SNP Detail
Alliance Variant		 Chr2:147020302 Cpgi12376 within coordinates of
Nkx2-2 Intron
Nkx2-2 mRNA-UTR
Nkx2-2 Noncoding-Transcript-Variant
Rr566759 within coordinates of
Rr566762 574 bp proximal
 SNP A/C C A
rs213250129
MGI SNP Detail
Alliance Variant		 Chr2:147020345 Cpgi12376 within coordinates of
Nkx2-2 Intron
Nkx2-2 mRNA-UTR
Nkx2-2 Noncoding-Transcript-Variant
Rr566759 within coordinates of
Rr566762 531 bp proximal
 SNP C/T T C
rs33156324
MGI SNP Detail
Alliance Variant		 Chr2:147020359 Cpgi12376 within coordinates of
Nkx2-2 Intron
Nkx2-2 mRNA-UTR
Nkx2-2 Noncoding-Transcript-Variant
Rr566759 within coordinates of
Rr566762 517 bp proximal
 SNP A/G A G A G A
rs108093808
MGI SNP Detail
Alliance Variant		 Chr2:147020407 Cpgi12376 within coordinates of
Nkx2-2 Intron
Nkx2-2 mRNA-UTR
Nkx2-2 Noncoding-Transcript-Variant
Rr566759 within coordinates of
Rr566762 469 bp proximal
 SNP A/T A T T A
rs226483627
MGI SNP Detail
Alliance Variant		 Chr2:147020442 Nkx2-2 Intron
Nkx2-2 mRNA-UTR
Nkx2-2 Noncoding-Transcript-Variant
Rr566759 within coordinates of
Rr566762 434 bp proximal
 SNP A/G A G
rs46738198
MGI SNP Detail
Alliance Variant		 Chr2:147020702 Cpgi12377 within coordinates of
Nkx2-2 Intron
Nkx2-2 mRNA-UTR
Nkx2-2 Noncoding-Transcript-Variant
Rr566759 within coordinates of
Rr566762 174 bp proximal
 SNP A A A
rs250145064
MGI SNP Detail
Alliance Variant		 Chr2:147020756 Cpgi12377 within coordinates of
Nkx2-2 Intron
Nkx2-2 mRNA-UTR
Nkx2-2 Noncoding-Transcript-Variant
Rr566759 within coordinates of
Rr566762 120 bp proximal
 SNP C/T C C C C C C C C C C C C C C C C C C C T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C
rs27294769
MGI SNP Detail
Alliance Variant		 Chr2:147020785 Cpgi12377 within coordinates of
Nkx2-2 Intron
Nkx2-2 mRNA-UTR
Nkx2-2 Noncoding-Transcript-Variant
Rr566759 within coordinates of
Rr566762 91 bp proximal
 SNP A/G A A A A A G A A A A A A A A
rs262762812
MGI SNP Detail
Alliance Variant		 Chr2:147020816 Cpgi12377 within coordinates of
Nkx2-2 Intron
Nkx2-2 mRNA-UTR
Nkx2-2 Noncoding-Transcript-Variant
Rr566759 within coordinates of
Rr566762 60 bp proximal
 SNP C/T C T
rs49692606
MGI SNP Detail
Alliance Variant		 Chr2:147020843 Cpgi12377 within coordinates of
Nkx2-2 Intron
Nkx2-2 mRNA-UTR
Nkx2-2 Noncoding-Transcript-Variant
Rr566759 within coordinates of
Rr566762 33 bp proximal
 SNP G G G G
rs27294768
MGI SNP Detail
Alliance Variant		 Chr2:147020848 Cpgi12377 within coordinates of
Nkx2-2 Intron
Nkx2-2 mRNA-UTR
Nkx2-2 Noncoding-Transcript-Variant
Rr566759 within coordinates of
Rr566762 28 bp proximal
 SNP C/T C T C T C T C T C T T T C C C T
rs256700629
MGI SNP Detail
Alliance Variant		 Chr2:147020893 Cpgi12377 within coordinates of
Nkx2-2 Intron
Nkx2-2 mRNA-UTR
Nkx2-2 Noncoding-Transcript-Variant
Rr566759 within coordinates of
Rr566762 within coordinates of
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs27342865
MGI SNP Detail
Alliance Variant		 Chr2:147020936 Cpgi12377 within coordinates of
Nkx2-2 Intron
Nkx2-2 mRNA-UTR
Nkx2-2 Noncoding-Transcript-Variant
Rr566759 within coordinates of
Rr566762 39 bp distal
 SNP C/G C C C C C C C C C C C G C
rs27342864
MGI SNP Detail
Alliance Variant		 Chr2:147020937 Cpgi12377 within coordinates of
Nkx2-2 Intron
Nkx2-2 mRNA-UTR
Nkx2-2 Noncoding-Transcript-Variant
Rr566759 within coordinates of
Rr566762 40 bp distal
 SNP G/T G G T G T G T G T G T T T G G T T
rs27342863
MGI SNP Detail
Alliance Variant		 Chr2:147020954 Cpgi12377 within coordinates of
Nkx2-2 Intron
Nkx2-2 mRNA-UTR
Nkx2-2 Noncoding-Transcript-Variant
Rr566759 within coordinates of
Rr566762 57 bp distal
 SNP C/G C C G C G C C G C G G G C C C G
rs27342862
MGI SNP Detail
Alliance Variant		 Chr2:147021197 Nkx2-2 Intron
Nkx2-2 Noncoding-Transcript-Variant
Rr566759 within coordinates of
Rr566762 300 bp distal
 SNP A/G A A G A G A A A G G A A G
SNP ID
(GRCm39)		 Map Position
(GRCm39)		 Gene & Category Variation
Type		 Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
129X1/SvJ
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PL/J
PWD/PhJ
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs251223053
MGI SNP Detail
Alliance Variant		 Chr2:147021209 Nkx2-2 Intron
Nkx2-2 Noncoding-Transcript-Variant
Rr566759 within coordinates of
Rr566762 312 bp distal
 SNP C/G C G
rs27342861
MGI SNP Detail
Alliance Variant		 Chr2:147021251 Nkx2-2 Intron
Nkx2-2 Noncoding-Transcript-Variant
Rr566759 within coordinates of
Rr566762 354 bp distal
 SNP A/G A A G A G A G A G A G G G A A G G
rs27342860
MGI SNP Detail
Alliance Variant		 Chr2:147021286 Nkx2-2 Intron
Nkx2-2 Noncoding-Transcript-Variant
Rr566759 within coordinates of
Rr566762 389 bp distal
 SNP C/T T T C T C T C T C T C C C T T T C
rs244983711
MGI SNP Detail
Alliance Variant		 Chr2:147021350 Nkx2-2 Intron
Nkx2-2 Noncoding-Transcript-Variant
Rr566759 within coordinates of
Rr566762 453 bp distal
 SNP C/G G G G G G G G G G G G G G G G G G G G C G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G
rs46725263
MGI SNP Detail
Alliance Variant		 Chr2:147021422 Nkx2-2 Intron
Nkx2-2 Noncoding-Transcript-Variant
Rr566759 within coordinates of
Rr566762 525 bp distal
 SNP C/T C T T T
rs234965346
MGI SNP Detail
Alliance Variant		 Chr2:147021447 Nkx2-2 Intron
Nkx2-2 Noncoding-Transcript-Variant
Rr566759 within coordinates of
Rr566762 550 bp distal
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C
rs27342859
MGI SNP Detail
Alliance Variant		 Chr2:147021683 Nkx2-2 Intron
Nkx2-2 Noncoding-Transcript-Variant
Rr566762 786 bp distal
 SNP A/G A A A A A A A G A A G G
rs226197882
MGI SNP Detail
Alliance Variant		 Chr2:147021788 Nkx2-2 Intron
Nkx2-2 Noncoding-Transcript-Variant
Rr566762 891 bp distal
 SNP A/G G A
rs27342858
MGI SNP Detail
Alliance Variant		 Chr2:147021823 Nkx2-2 Intron
Nkx2-2 Noncoding-Transcript-Variant
Rr566762 926 bp distal
 SNP C/T C C T C T C C C C C C C C C
rs582135393
MGI SNP Detail
Alliance Variant		 Chr2:147021827 Nkx2-2 Intron
Nkx2-2 Noncoding-Transcript-Variant
Rr566762 930 bp distal
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs225008631
MGI SNP Detail
Alliance Variant		 Chr2:147021886 Nkx2-2 Intron
Nkx2-2 Noncoding-Transcript-Variant
Rr566762 989 bp distal
 SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs27342857
MGI SNP Detail
Alliance Variant		 Chr2:147021897 Nkx2-2 Intron
Nkx2-2 Noncoding-Transcript-Variant
Rr566762 1000 bp distal
 SNP A/T T A T A T A T A T A A A T T A A
rs27342856
MGI SNP Detail
Alliance Variant		 Chr2:147021930 Nkx2-2 Intron
Nkx2-2 Noncoding-Transcript-Variant
Rr566762 1033 bp distal
 SNP A/G G G G G G G G G G G A G G A A
rs223881942
MGI SNP Detail
Alliance Variant		 Chr2:147021934 Nkx2-2 Intron
Nkx2-2 Noncoding-Transcript-Variant
Rr566762 1037 bp distal
 SNP G G G
rs258841624
MGI SNP Detail
Alliance Variant		 Chr2:147021961 Nkx2-2 Intron
Nkx2-2 Noncoding-Transcript-Variant
Rr566762 1064 bp distal
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs585936192
MGI SNP Detail
Alliance Variant		 Chr2:147022019 Nkx2-2 Intron
Nkx2-2 Noncoding-Transcript-Variant
Rr566762 1122 bp distal
 SNP A/T A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A T A A A A
rs260523855
MGI SNP Detail
Alliance Variant		 Chr2:147022027 Nkx2-2 Intron
Nkx2-2 Noncoding-Transcript-Variant
Rr566762 1130 bp distal
 SNP A A A
rs579003193
MGI SNP Detail
Alliance Variant		 Chr2:147022035 Nkx2-2 Intron
Nkx2-2 Noncoding-Transcript-Variant
Rr566762 1138 bp distal
 SNP C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C
rs218477294
MGI SNP Detail
Alliance Variant		 Chr2:147022036 Nkx2-2 Intron
Nkx2-2 Noncoding-Transcript-Variant
Rr566762 1139 bp distal
 SNP C/T T C
rs241407607
MGI SNP Detail
Alliance Variant		 Chr2:147022063 Nkx2-2 Intron
Nkx2-2 Noncoding-Transcript-Variant
Rr566762 1166 bp distal
 SNP C/T T C
rs258472899
MGI SNP Detail
Alliance Variant		 Chr2:147022095 Nkx2-2 Intron
Nkx2-2 Noncoding-Transcript-Variant
Rr566762 1198 bp distal
 SNP A/C C A
rs252258789
MGI SNP Detail
Alliance Variant		 Chr2:147022162 Nkx2-2 Intron
Nkx2-2 Noncoding-Transcript-Variant
Rr566762 1265 bp distal
 SNP A/G G G G A G G A A G A A A G G G G G G G A A G G G G A A G G A A G A A A A G A G A G A A A A A A A A A A A A
rs220194650
MGI SNP Detail
Alliance Variant		 Chr2:147022187 Nkx2-2 Intron
Nkx2-2 Noncoding-Transcript-Variant
Rr566762 1290 bp distal
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs27342855
MGI SNP Detail
Alliance Variant		 Chr2:147022233 Nkx2-2 Intron
Nkx2-2 Noncoding-Transcript-Variant
Rr406682 within coordinates of
Rr566762 1336 bp distal
 SNP G/T G T G T G T G T G T T T G G T T
rs265947659
MGI SNP Detail
Alliance Variant		 Chr2:147022253 Nkx2-2 Intron
Nkx2-2 Noncoding-Transcript-Variant
Rr406682 within coordinates of
Rr566762 1356 bp distal
 SNP G/T G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G T G G G G
SNP ID
(GRCm39)		 Map Position
(GRCm39)		 Gene & Category Variation
Type		 Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
129X1/SvJ
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PL/J
PWD/PhJ
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs231350287
MGI SNP Detail
Alliance Variant		 Chr2:147022267 Nkx2-2 Intron
Nkx2-2 Noncoding-Transcript-Variant
Rr406682 within coordinates of
Rr566762 1370 bp distal
 SNP A A A
rs27342854
MGI SNP Detail
Alliance Variant		 Chr2:147022279 Nkx2-2 Intron
Nkx2-2 Noncoding-Transcript-Variant
Rr406682 within coordinates of
Rr566762 1382 bp distal
 SNP C/T C T C C T C T C T T C C T T
rs27342853
MGI SNP Detail
Alliance Variant		 Chr2:147022319 Nkx2-2 Intron
Nkx2-2 Noncoding-Transcript-Variant
Rr406682 within coordinates of
Rr566762 1422 bp distal
 SNP A/G G G G G G G G G G A G G G G
rs225188304
MGI SNP Detail
Alliance Variant		 Chr2:147022334 Nkx2-2 Intron
Nkx2-2 Noncoding-Transcript-Variant
Rr406682 within coordinates of
Rr566762 1437 bp distal
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs244358238
MGI SNP Detail
Alliance Variant		 Chr2:147022345 Nkx2-2 Intron
Nkx2-2 Noncoding-Transcript-Variant
Rr406682 within coordinates of
Rr566762 1448 bp distal
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs253661052
MGI SNP Detail
Alliance Variant		 Chr2:147022363 Nkx2-2 Intron
Nkx2-2 Noncoding-Transcript-Variant
Rr406682 within coordinates of
Rr566762 1466 bp distal
 SNP C/G C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C G C C C C
rs27342852
MGI SNP Detail
Alliance Variant		 Chr2:147022418 Nkx2-2 Intron
Nkx2-2 Noncoding-Transcript-Variant
Rr406682 within coordinates of
Rr566762 1521 bp distal
 SNP A/G A G A G A A A G G A A G
rs387685452
MGI SNP Detail
Alliance Variant		 Chr2:147022461 Nkx2-2 Intron
Nkx2-2 Noncoding-Transcript-Variant
Rr406682 within coordinates of
Rr566762 1564 bp distal
 SNP A/G G G A G G A G A A G G G A G G G G A A A G A A A G A A A
rs586445087
MGI SNP Detail
Alliance Variant		 Chr2:147022470 Nkx2-2 Intron
Nkx2-2 Noncoding-Transcript-Variant
Rr406682 within coordinates of
Rr566762 1573 bp distal
 SNP A/G A A G A A G A G A A G G A G G A G G G
rs580571620
MGI SNP Detail
Alliance Variant		 Chr2:147022491 Nkx2-2 Intron
Nkx2-2 Noncoding-Transcript-Variant
Rr406682 within coordinates of
Rr566762 1594 bp distal
 SNP G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G
rs217837318
MGI SNP Detail
Alliance Variant		 Chr2:147022567 Nkx2-2 Intron
Nkx2-2 Noncoding-Transcript-Variant
Rr406682 within coordinates of
Rr566762 1670 bp distal
 SNP T T T
rs248345345
MGI SNP Detail
Alliance Variant		 Chr2:147022587 Nkx2-2 Intron
Nkx2-2 Noncoding-Transcript-Variant
Rr406682 within coordinates of
Rr566762 1690 bp distal
 SNP C/T C T
rs253589018
MGI SNP Detail
Alliance Variant		 Chr2:147022735 Nkx2-2 Intron
Nkx2-2 Noncoding-Transcript-Variant
Rr406682 within coordinates of
Rr566762 1838 bp distal
Rr566763 within coordinates of
 SNP A/G G G G G G G G G G G G G G G G G G G G A G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G
rs29869515
MGI SNP Detail
Alliance Variant		 Chr2:147022882 Cpgi12378 within coordinates of
Nkx2-2 Intron
Nkx2-2 Noncoding-Transcript-Variant
Rr406682 within coordinates of
Rr566762 1985 bp distal
Rr566763 within coordinates of
 SNP A/G G A G G A A
<< first < prev1 next > last >>
Showing SNP(s) 1 - 89 of 89
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
Citing These Resources
Funding Information
Warranty Disclaimer, Privacy Notice, Licensing, & Copyright
Send questions and comments to User Support. 		last database update
03/25/2025
MGI 6.24 		The Jackson Laboratory