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Mouse SNP Summary
Symbol
Name
ID 		Rr566948
regulatory region 566948
MGI:8029080

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SNP ID
(GRCm39)		 Map Position
(GRCm39)		 Gene & Category Variation
Type		 Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PL/J
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs221290534
MGI SNP Detail
Alliance Variant		 Chr2:148517632 Gm75182 within coordinates of
Nxt1 Coding-Synonymous
Rr566948 1902 bp proximal
 SNP A/G G G G G G G G G G G G G G G G G G G G A G G A G G G G A G G G G A A A A G A G A G G G G G G A G G G G
rs244713613
MGI SNP Detail
Alliance Variant		 Chr2:148517807 Gm75182 within coordinates of
Nxt1 mRNA-UTR
Rr566948 1727 bp proximal
 SNP C/G G G G G G G G G G G G G G G G G G G G C G G C G G G G C G G G G G C C C C G C G C G G G G G G G C G G G G
rs266053034
MGI SNP Detail		 Chr2:148517976 Gm75182 within coordinates of
Rr566948 1558 bp proximal
 SNP G/T G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G T G G G G
rs233051908
MGI SNP Detail		 Chr2:148517984 Gm75182 within coordinates of
Rr566948 1550 bp proximal
 SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A A A G G G A G A A A A A A A A A A A A A A
rs254172229
MGI SNP Detail		 Chr2:148517995 Gm75182 within coordinates of
Rr566948 1539 bp proximal
 SNP A/G A A A A A A A A A A A A A A A A A A A G A A G A A A A A A A A A A G A A A A A A G A A A A A A A A A A A A
rs256042774
MGI SNP Detail		 Chr2:148518011 Gm75182 within coordinates of
Rr566948 1523 bp proximal
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C C C T T T C T C C C C C C C C C C C C C C
rs226422031
MGI SNP Detail		 Chr2:148518031 Gm75182 within coordinates of
Rr566948 1503 bp proximal
 SNP G/T G G G G G G G G G G G G G G G G G G G G G G G G G G G T G G G G G T T T G T G G G G G G G G G G G G G G
rs244906371
MGI SNP Detail		 Chr2:148518126 Gm75182 within coordinates of
Rr566948 1408 bp proximal
 SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T T T C C C T C T T T T T T T T T C T T T T
rs216054900
MGI SNP Detail		 Chr2:148518133 Gm75182 within coordinates of
Rr566948 1401 bp proximal
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs234172878
MGI SNP Detail		 Chr2:148518134 Gm75182 within coordinates of
Rr566948 1400 bp proximal
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs254745640
MGI SNP Detail		 Chr2:148518139 Gm75182 within coordinates of
Rr566948 1395 bp proximal
 SNP C/T T T T T T T T T T T T T T T T T T T T T T T C T T T T T T T T T T T T T T T T T C T T T T T T T T T T T T
rs218201443
MGI SNP Detail		 Chr2:148518151 Gm75182 within coordinates of
Rr566948 1383 bp proximal
 SNP A/G A A A A A A A A A A A A A A A A A A A G A A G A A G A G A G A A A G G G G A G A G G A A A A A A G A A G G
rs579552341
MGI SNP Detail		 Chr2:148518162 Gm75182 within coordinates of
Rr566948 1372 bp proximal
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs235541348
MGI SNP Detail		 Chr2:148518194 Gm75182 within coordinates of
Rr566948 1340 bp proximal
 SNP A/G G G G G G G G G G G G G G G G G G G G A G G A G G G G G G G G G G A G G G G G G A G G G G G G G G G G G G
rs261180164
MGI SNP Detail		 Chr2:148518247 Gm75182 within coordinates of
Rr566948 1287 bp proximal
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C C C T T T C T C C C C C C C C C T C C C C
rs220393741
MGI SNP Detail		 Chr2:148518262 Gm75182 within coordinates of
Rr566948 1272 bp proximal
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs231635571
MGI SNP Detail		 Chr2:148518280 Gm75182 within coordinates of
Rr566948 1254 bp proximal
 SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T T T C C C T C T T T T T T T T T C T T T T
rs252209548
MGI SNP Detail		 Chr2:148518281 Gm75182 within coordinates of
Rr566948 1253 bp proximal
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G G G A A A G A G G G G G G G G G A G G G G
rs221230661
MGI SNP Detail		 Chr2:148518286 Gm75182 within coordinates of
Rr566948 1248 bp proximal
 SNP C/G C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C G C C C C
rs247534087
MGI SNP Detail		 Chr2:148518288 Gm75182 within coordinates of
Rr566948 1246 bp proximal
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C C C T T T C T C C C C C C C C C T C C C C
rs264337956
MGI SNP Detail		 Chr2:148518310 Gm75182 within coordinates of
Rr566948 1224 bp proximal
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs225767217
MGI SNP Detail		 Chr2:148518314 Gm75182 within coordinates of
Rr566948 1220 bp proximal
 SNP C/G G G G G G G G G G G G G G G G G G G G C G G C G G G G C G G G G G C C C C G C G C G G G G G G G C G G G G
rs582083166
MGI SNP Detail		 Chr2:148518358 Gm75182 within coordinates of
Rr566948 1176 bp proximal
 SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs241852134
MGI SNP Detail		 Chr2:148518438 Gm75182 within coordinates of
Rr566948 1096 bp proximal
 SNP C/T C C C C C C C C C C C C C C C C C C C T C C T C C C C T C C C C C T T T T C T C T C C C C C C C C C C C C
rs255983333
MGI SNP Detail		 Chr2:148518460 Gm75182 within coordinates of
Rr566948 1074 bp proximal
 SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
SNP ID
(GRCm39)		 Map Position
(GRCm39)		 Gene & Category Variation
Type		 Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PL/J
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs226557846
MGI SNP Detail		 Chr2:148518542 Gm75182 within coordinates of
Rr566948 992 bp proximal
 SNP G/T T T T T T T T T T T T T T T T T T T T G T T G T T T T G T T T T T G G G G T G T G T T T T T T T G T T T T
rs244848097
MGI SNP Detail		 Chr2:148518581 Gm75182 within coordinates of
Rr566948 953 bp proximal
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs259804401
MGI SNP Detail		 Chr2:148518598 Gm75182 within coordinates of
Rr566948 936 bp proximal
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs231773772
MGI SNP Detail		 Chr2:148518657 Gm75182 within coordinates of
Rr566948 877 bp proximal
 SNP A/G A A A A A A A A A A A A A A A A A A A G A A G A A A A G A A A A A G G G A G A G A A A A A A A G A A A A
rs260368321
MGI SNP Detail		 Chr2:148518658 Gm75182 within coordinates of
Rr566948 876 bp proximal
 SNP A/G A A A A A A A A A A A A A A A A A A A G A A G A A A A G A A A A A G G G A G A G A A A A A A A A A A A A
rs218321119
MGI SNP Detail		 Chr2:148518723 Gm75182 within coordinates of
Rr566948 811 bp proximal
 SNP A/G A A A A A A A A A A A A A A A A A A A G A A G A A A A A A A A A A G A A A A A A G A A A A A A A A A A A A
rs229294814
MGI SNP Detail		 Chr2:148518820 Gm75182 within coordinates of
Rr566948 714 bp proximal
 SNP A/T A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A T A A A A
rs242406312
MGI SNP Detail		 Chr2:148518833 Gm75182 within coordinates of
Rr566948 701 bp proximal
 SNP A/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T A T T T T
rs214738384
MGI SNP Detail		 Chr2:148518916 Gm75182 within coordinates of
Rr566948 618 bp proximal
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs231760253
MGI SNP Detail		 Chr2:148518918 Gm75182 within coordinates of
Rr566948 616 bp proximal
 SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs6301372
MGI SNP Detail		 Chr2:148518945 Gm75182 within coordinates of
Rr566948 589 bp proximal
 SNP C/T T C
rs215449066
MGI SNP Detail		 Chr2:148518989 Gm75182 within coordinates of
Rr566948 545 bp proximal
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs240644767
MGI SNP Detail		 Chr2:148518997 Gm75182 within coordinates of
Rr566948 537 bp proximal
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs264081761
MGI SNP Detail		 Chr2:148519015 Gm75182 within coordinates of
Rr566948 519 bp proximal
 SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs225564060
MGI SNP Detail		 Chr2:148519055 Gm75182 within coordinates of
Rr566948 479 bp proximal
 SNP C/T C C C C C C C C C C C C C C C C C C C T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C
rs244597469
MGI SNP Detail		 Chr2:148519102 Gm75182 within coordinates of
Rr566948 432 bp proximal
 SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A A G G G A G A A A A A A A A G A A A A
rs249301152
MGI SNP Detail		 Chr2:148519127 Gm75182 within coordinates of
Rr566948 407 bp proximal
 SNP A/C A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A C A A A A
rs6315081
MGI SNP Detail		 Chr2:148519184 Gm75182 within coordinates of
Rr566948 350 bp proximal
 SNP C/T C T
rs238842628
MGI SNP Detail		 Chr2:148519221 Gm75182 within coordinates of
Rr566948 313 bp proximal
 SNP A/T T T T T T T T T T T T T T T T T T T T T T T T T T T T A T T T T T A A A T A T T T T T T T T T T T T T
rs259948790
MGI SNP Detail		 Chr2:148519234 Gm75182 within coordinates of
Rr566948 300 bp proximal
 SNP C/G C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C G C C C C
rs231956810
MGI SNP Detail		 Chr2:148519260 Gm75182 within coordinates of
Rr566948 274 bp proximal
 SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A A A G G G A G A A A A A A A A A A A A A A
rs248230317
MGI SNP Detail		 Chr2:148519303 Gm75182 within coordinates of
Rr566948 231 bp proximal
 SNP C/T C C C C C C C C C C C C C C C C C C C T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C
rs265962901
MGI SNP Detail		 Chr2:148519349 Gm75182 within coordinates of
Rr566948 185 bp proximal
 SNP A/C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C A C C C C
rs229032417
MGI SNP Detail		 Chr2:148519415 Gm75182 within coordinates of
Rr566948 119 bp proximal
 SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs6316612
MGI SNP Detail		 Chr2:148519476 Gm75182 within coordinates of
Rr566948 58 bp proximal
 SNP G/T T G
SNP ID
(GRCm39)		 Map Position
(GRCm39)		 Gene & Category Variation
Type		 Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PL/J
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs214480349
MGI SNP Detail		 Chr2:148519535 Gm75182 within coordinates of
Rr566948 within coordinates of
 SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs225433472
MGI SNP Detail		 Chr2:148519546 Gm75182 within coordinates of
Rr566948 within coordinates of
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs246307998
MGI SNP Detail		 Chr2:148519599 Gm75182 within coordinates of
Rr566948 within coordinates of
 SNP C/T C C C C C C C C C C C C C C C C C C C T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C
rs216212524
MGI SNP Detail		 Chr2:148519621 Gm75182 within coordinates of
Rr566948 within coordinates of
 SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs243362318
MGI SNP Detail		 Chr2:148519687 Cpgi12400 within coordinates of
Gm75182 within coordinates of
Rr566948 within coordinates of
 SNP C/T C C C C C C C C C C C C C C C C C C C T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C
rs260500440
MGI SNP Detail		 Chr2:148519692 Cpgi12400 within coordinates of
Gm75182 within coordinates of
Rr566948 within coordinates of
 SNP G/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T G T T T T
rs217788515
MGI SNP Detail		 Chr2:148519696 Cpgi12400 within coordinates of
Gm75182 within coordinates of
Rr566948 within coordinates of
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs235283189
MGI SNP Detail		 Chr2:148519755 Cpgi12400 within coordinates of
Gm75182 within coordinates of
Rr566948 within coordinates of
 SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A
rs249239656
MGI SNP Detail		 Chr2:148519765 Cpgi12400 within coordinates of
Gm75182 within coordinates of
Rr566948 within coordinates of
 SNP G/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T G T T T T
rs219973072
MGI SNP Detail		 Chr2:148519769 Cpgi12400 within coordinates of
Gm75182 within coordinates of
Rr566948 within coordinates of
 SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs238558027
MGI SNP Detail		 Chr2:148519793 Cpgi12400 within coordinates of
Gm75182 within coordinates of
Rr566948 within coordinates of
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs253560539
MGI SNP Detail		 Chr2:148519816 Cpgi12400 within coordinates of
Gm75182 within coordinates of
Rr566948 within coordinates of
 SNP A/C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C A C C C C
rs224203654
MGI SNP Detail		 Chr2:148519839 Cpgi12400 within coordinates of
Gm75182 within coordinates of
Rr566948 within coordinates of
 SNP C/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G C G G G G
rs251041953
MGI SNP Detail		 Chr2:148519847 Cpgi12400 within coordinates of
Gm75182 within coordinates of
Rr566948 within coordinates of
 SNP A/G A A A A A A A A A A A A A A A A A A A G A A G A A A A G A A A G G G G A G A G A A A A A A A A A G G
rs263961316
MGI SNP Detail		 Chr2:148519849 Cpgi12400 within coordinates of
Gm75182 within coordinates of
Rr566948 within coordinates of
 SNP C/G C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C G C C C C
rs229389192
MGI SNP Detail		 Chr2:148519850 Cpgi12400 within coordinates of
Gm75182 within coordinates of
Rr566948 within coordinates of
 SNP A/G/T T T T T T T T T T T T T T T T T T T T A T T A T T T T G T T T A G G G T G T A T T T T T T G T T G
rs236032654
MGI SNP Detail		 Chr2:148519865 Cpgi12400 within coordinates of
Gm75182 within coordinates of
Rr566948 within coordinates of
 SNP A/T T T T T T T T T T T T T T T T T T T T A T T A T T T T A T T T T A A A A T A T A T T T T T T A T T T T
rs256562861
MGI SNP Detail		 Chr2:148519867 Cpgi12400 within coordinates of
Gm75182 within coordinates of
Rr566948 within coordinates of
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs225358760
MGI SNP Detail		 Chr2:148519870 Cpgi12400 within coordinates of
Gm75182 within coordinates of
Rr566948 within coordinates of
 SNP A/C/T T T T T T T T T T T T T T T T T T T T A T T C T T T T T T T T T C T T T T T T C T T T T T T T T T T T
rs246078483
MGI SNP Detail		 Chr2:148519878 Cpgi12400 within coordinates of
Gm75182 within coordinates of
Rr566948 within coordinates of
 SNP C/T C C C C C C C C C C C C C C C C C C C T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C
rs265595732
MGI SNP Detail		 Chr2:148519887 Cpgi12400 within coordinates of
Gm75182 within coordinates of
Rr566948 within coordinates of
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs234245088
MGI SNP Detail		 Chr2:148519912 Cpgi12400 within coordinates of
Gm75182 within coordinates of
Rr566948 within coordinates of
 SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs259446183
MGI SNP Detail		 Chr2:148519938 Cpgi12400 within coordinates of
Rr566948 22 bp distal
Rr566949 within coordinates of
 SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs213115798
MGI SNP Detail		 Chr2:148519946 Cpgi12400 within coordinates of
Rr566948 30 bp distal
Rr566949 within coordinates of
 SNP A/C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C C T T T C T C C C C C C C C A C C C C
rs230175487
MGI SNP Detail		 Chr2:148520003 Cpgi12400 within coordinates of
Rr566948 87 bp distal
Rr566949 within coordinates of
 SNP A/C A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A C A A A A
SNP ID
(GRCm39)		 Map Position
(GRCm39)		 Gene & Category Variation
Type		 Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PL/J
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs243306284
MGI SNP Detail		 Chr2:148520041 Cpgi12400 within coordinates of
Rr566948 125 bp distal
Rr566949 within coordinates of
 SNP A/T T T T T T T T T T T T T T T T T T T T T T T T T T T T A T T T T T A A A T A T T T T T T T T T T T T
rs214204689
MGI SNP Detail		 Chr2:148520067 Cpgi12400 within coordinates of
Rr566948 151 bp distal
Rr566949 within coordinates of
 SNP C/T C C C C C C C C C C C C C C C C C C C T C C T C C C C C C C C C T C C C C C C T C C C C C C C C C C C
rs231230563
MGI SNP Detail		 Chr2:148520081 Cpgi12400 within coordinates of
Rr566948 165 bp distal
Rr566949 within coordinates of
 SNP A/T A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A T A A A A
rs259108719
MGI SNP Detail		 Chr2:148520090 Cpgi12400 within coordinates of
Rr566948 174 bp distal
Rr566949 within coordinates of
 SNP G/T G G G G G G G G G G G G G G G G G G G G G G G G G G G G G T G G G G G G G G G G G G G G G G G G G G G T G
rs224110472
MGI SNP Detail		 Chr2:148520102 Rr566948 186 bp distal
Rr566949 within coordinates of
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs240290516
MGI SNP Detail		 Chr2:148520155 Rr566948 239 bp distal
Rr566949 within coordinates of
 SNP C/T T T T T T T T T T T T T T T T T T T T C T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T
rs580413645
MGI SNP Detail		 Chr2:148520181 Rr566948 265 bp distal
Rr566949 within coordinates of
 SNP A/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T A T T T T
rs263759051
MGI SNP Detail		 Chr2:148520243 Rr566948 327 bp distal
Rr566949 within coordinates of
 SNP A/G A A A A A A A A A A A A A A A A A A A G A A G A A A A G A A A A G G G G A G A G A A A A A A A G A A G G
rs221310273
MGI SNP Detail		 Chr2:148520251 Rr566948 335 bp distal
Rr566949 within coordinates of
 SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs235780541
MGI SNP Detail		 Chr2:148520268 Rr566948 352 bp distal
Rr566949 within coordinates of
 SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs256485245
MGI SNP Detail		 Chr2:148520281 Rr566948 365 bp distal
Rr566949 within coordinates of
 SNP C/G G G G G G G G G G G G G G G G G G G G G G G G G G G G C G G G G G G C C C G C G G G G G G G G G G G G G G
rs219535719
MGI SNP Detail		 Chr2:148520323 Rr566948 407 bp distal
Rr566949 within coordinates of
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs240069641
MGI SNP Detail		 Chr2:148520493 Rr566948 577 bp distal
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs263222868
MGI SNP Detail		 Chr2:148520529 Rr566948 613 bp distal
 SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs235676568
MGI SNP Detail		 Chr2:148520546 Rr566948 630 bp distal
 SNP C/G C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C G C C C C
rs254280477
MGI SNP Detail		 Chr2:148520632 Rr566948 716 bp distal
 SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs583783217
MGI SNP Detail		 Chr2:148520668 Rr566948 752 bp distal
 SNP C/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G C G G G G
rs264970404
MGI SNP Detail		 Chr2:148520694 Rr566948 778 bp distal
 SNP G/T T T T T T T T T T T T T T T T G T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T
rs245995681
MGI SNP Detail		 Chr2:148520743 Rr566948 827 bp distal
 SNP A/C C C C C C C C C C C C C C C C C C C C A C C A C C C C C C C C C C A C C C C C C A C C C C C C C A C C C C
rs214148530
MGI SNP Detail		 Chr2:148520759 Rr566948 843 bp distal
 SNP A/C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C A C C C C
rs231419236
MGI SNP Detail		 Chr2:148520810 Rr566948 894 bp distal
 SNP A/C C C C C C C C C C C C C C C C C C C C A C C A C C C C A C C C C C A A A A C A C A C C C C C C C A C C C C
rs257799460
MGI SNP Detail		 Chr2:148520838 Rr566948 922 bp distal
 SNP A/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T A T T T T
rs215294794
MGI SNP Detail		 Chr2:148520882 Rr566948 966 bp distal
 SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A A A G G G A G A A A A A A A A A A A A A A
rs242711578
MGI SNP Detail		 Chr2:148520889 Rr566948 973 bp distal
 SNP A/G A A A A A A A A A A A A A A A A A A A G A A G A A A A A A A A A A G A A A A A A G A A A A A A A A A A A A
rs260224286
MGI SNP Detail		 Chr2:148521001 Rr566948 1085 bp distal
Rr566950 within coordinates of
 SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
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Showing SNP(s) 1 - 100 of 120
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
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Send questions and comments to User Support. 		last database update
03/25/2025
MGI 6.24 		The Jackson Laboratory