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Mouse SNP Summary
Symbol
Name
ID 		Rr568440
regulatory region 568440
MGI:8030572

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SNP ID
(GRCm39)		 Map Position
(GRCm39)		 Gene & Category Variation
Type		 Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
129X1/SvJ
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PL/J
PWD/PhJ
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs249493616
MGI SNP Detail
Alliance Variant		 Chr2:156961705 Rr568440 1964 bp proximal
Samhd1 Intron
Samhd1 mRNA-UTR
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs211739735
MGI SNP Detail
Alliance Variant		 Chr2:156961770 Rr568440 1899 bp proximal
Samhd1 Intron
Samhd1 mRNA-UTR
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs235204811
MGI SNP Detail
Alliance Variant		 Chr2:156961793 Rr568440 1876 bp proximal
Samhd1 Intron
Samhd1 mRNA-UTR
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs27308037
MGI SNP Detail
Alliance Variant		 Chr2:156961843 Rr568440 1826 bp proximal
Samhd1 Intron
Samhd1 mRNA-UTR
 SNP A/G G G G A G A G G A A G A A A G G A G G
rs33248168
MGI SNP Detail
Alliance Variant		 Chr2:156961994 Rr568440 1675 bp proximal
Samhd1 Intron
Samhd1 mRNA-UTR
 SNP C/T T T T T C C T
rs232665377
MGI SNP Detail
Alliance Variant		 Chr2:156961999 Rr568440 1670 bp proximal
Samhd1 Intron
Samhd1 mRNA-UTR
 SNP G/T G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G T G G G G
rs33287272
MGI SNP Detail
Alliance Variant		 Chr2:156962043 Rr568440 1626 bp proximal
Samhd1 Intron
Samhd1 mRNA-UTR
 SNP C/T T T T T C C T
rs27308036
MGI SNP Detail
Alliance Variant		 Chr2:156962132 Rr568440 1537 bp proximal
Samhd1 Coding-Synonymous
Samhd1 Intron
 SNP A/C A A A C A C A A C C A C C C A A C A A
rs578838377
MGI SNP Detail
Alliance Variant		 Chr2:156962180 Rr568440 1489 bp proximal
Samhd1 Coding-Synonymous
Samhd1 Intron
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs251229859
MGI SNP Detail
Alliance Variant		 Chr2:156962250 Rr568440 1419 bp proximal
Samhd1 Coding-NonSynonymous
Samhd1 Intron
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs255504124
MGI SNP Detail
Alliance Variant		 Chr2:156962326 Rr568440 1343 bp proximal
Samhd1 Intron
 SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs221179109
MGI SNP Detail
Alliance Variant		 Chr2:156962361 Rr568440 1308 bp proximal
Samhd1 Intron
 SNP A/T A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A T A A A A
rs238890201
MGI SNP Detail
Alliance Variant		 Chr2:156962377 Rr568440 1292 bp proximal
Samhd1 Intron
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs27308035
MGI SNP Detail
Alliance Variant		 Chr2:156962414 Rr568440 1255 bp proximal
Samhd1 Coding-NonSynonymous
Samhd1 mRNA-UTR
 SNP C/G C C G C G C C G G C G G G C C G C C
rs33383558
MGI SNP Detail
Alliance Variant		 Chr2:156962489 Rr568440 1180 bp proximal
Samhd1 Intron
 SNP C/T T T C C T
rs33721570
MGI SNP Detail
Alliance Variant		 Chr2:156962512 Rr568440 1157 bp proximal
Samhd1 Intron
 SNP C/T T T C C T
rs28330121
MGI SNP Detail
Alliance Variant		 Chr2:156962544 Rr568440 1125 bp proximal
Samhd1 Intron
 SNP G/T G T
rs260837649
MGI SNP Detail
Alliance Variant		 Chr2:156962599 Rr568440 1070 bp proximal
Samhd1 Intron
 SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs232882330
MGI SNP Detail
Alliance Variant		 Chr2:156962605 Rr568440 1064 bp proximal
Samhd1 Intron
 SNP A/G A G
rs27308034
MGI SNP Detail
Alliance Variant		 Chr2:156962663 Rr374135 within coordinates of
Rr568440 1006 bp proximal
Samhd1 Intron
 SNP A/G G G G A G A G G A A G A A A G G A G G
rs262177968
MGI SNP Detail
Alliance Variant		 Chr2:156962698 Rr374135 within coordinates of
Rr568440 971 bp proximal
Samhd1 Intron
 SNP C/T T T T T T T T T T T T T T T T T T T T T T C T T T T T T T C T T C T T T T T T T T T T T T T T T C T T T T
rs230674337
MGI SNP Detail
Alliance Variant		 Chr2:156962706 Rr374135 within coordinates of
Rr568440 963 bp proximal
Samhd1 Intron
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs243479451
MGI SNP Detail
Alliance Variant		 Chr2:156962745 Rr374135 within coordinates of
Rr568440 924 bp proximal
Samhd1 Intron
 SNP C/T C C C C C C C C C C C C C C C C C C C T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C
rs584520373
MGI SNP Detail
Alliance Variant		 Chr2:156962754 Rr374135 within coordinates of
Rr568440 915 bp proximal
Samhd1 Intron
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs32961405
MGI SNP Detail
Alliance Variant		 Chr2:156962763 Rr374135 within coordinates of
Rr568440 906 bp proximal
Samhd1 Intron
 SNP C/T C C C T T C
SNP ID
(GRCm39)		 Map Position
(GRCm39)		 Gene & Category Variation
Type		 Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
129X1/SvJ
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PL/J
PWD/PhJ
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs232631115
MGI SNP Detail
Alliance Variant		 Chr2:156962816 Rr374135 within coordinates of
Rr568440 853 bp proximal
Samhd1 Intron
 SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs27308033
MGI SNP Detail
Alliance Variant		 Chr2:156962895 Rr374135 within coordinates of
Rr568440 774 bp proximal
Samhd1 Intron
 SNP A/G G G G A G A G G A G A A A G G A G G
rs578640340
MGI SNP Detail
Alliance Variant		 Chr2:156962903 Rr374135 within coordinates of
Rr568440 766 bp proximal
Samhd1 Intron
 SNP C/G C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C G C C C C
rs217948936
MGI SNP Detail
Alliance Variant		 Chr2:156962906 Rr374135 within coordinates of
Rr568440 763 bp proximal
Samhd1 Intron
 SNP C/T C C C C C C C C C C C C C C C C C C C T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C
rs582038877
MGI SNP Detail
Alliance Variant		 Chr2:156962909 Rr374135 within coordinates of
Rr568440 760 bp proximal
Samhd1 Intron
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs27308032
MGI SNP Detail
Alliance Variant		 Chr2:156962910 Rr374135 within coordinates of
Rr568440 759 bp proximal
Samhd1 Intron
 SNP A/G G G G A G A G G G A A A A G G A G G
rs260788418
MGI SNP Detail
Alliance Variant		 Chr2:156962975 Rr374135 within coordinates of
Rr568440 694 bp proximal
Samhd1 Intron
 SNP A/C A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A C A A A A
rs221395685
MGI SNP Detail
Alliance Variant		 Chr2:156962977 Rr374135 within coordinates of
Rr568440 692 bp proximal
Samhd1 Intron
 SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs231712715
MGI SNP Detail
Alliance Variant		 Chr2:156962978 Rr374135 within coordinates of
Rr568440 691 bp proximal
Samhd1 Intron
 SNP A/C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C A C C C C
rs27308031
MGI SNP Detail
Alliance Variant		 Chr2:156962997 Rr374135 within coordinates of
Rr568440 672 bp proximal
Samhd1 Intron
 SNP A/T T T A T A T A T A A A T T A T T
rs237543512
MGI SNP Detail
Alliance Variant		 Chr2:156963070 Rr374135 within coordinates of
Rr568440 599 bp proximal
Samhd1 Intron
 SNP A/G G A
rs585132756
MGI SNP Detail
Alliance Variant		 Chr2:156963086 Rr374135 within coordinates of
Rr568440 583 bp proximal
Samhd1 Intron
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs255712688
MGI SNP Detail
Alliance Variant		 Chr2:156963090 Rr374135 within coordinates of
Rr568440 579 bp proximal
Samhd1 Intron
 SNP G/T T G
rs227526163
MGI SNP Detail
Alliance Variant		 Chr2:156963099 Rr374135 within coordinates of
Rr568440 570 bp proximal
Samhd1 Intron
 SNP C/T T C
rs227493689
MGI SNP Detail
Alliance Variant		 Chr2:156963118 Rr374135 within coordinates of
Rr568440 551 bp proximal
Samhd1 Intron
 SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs27308030
MGI SNP Detail
Alliance Variant		 Chr2:156963163 Rr374135 within coordinates of
Rr568440 506 bp proximal
Samhd1 Intron
 SNP C/T C C C T C T C C T C T T T C C T C C
rs264935428
MGI SNP Detail
Alliance Variant		 Chr2:156963176 Rr374135 within coordinates of
Rr568440 493 bp proximal
Samhd1 Intron
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs225669429
MGI SNP Detail
Alliance Variant		 Chr2:156963212 Rr374135 within coordinates of
Rr568440 457 bp proximal
Samhd1 Intron
 SNP A/G G G G G G G G G G G G G G G G G G G G A G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G
rs255900958
MGI SNP Detail
Alliance Variant		 Chr2:156963245 Rr374135 within coordinates of
Rr568440 424 bp proximal
Samhd1 Intron
 SNP A/G G G G G A G G G A A G G G G G G G G G G G G A A A G A A A G A G G A G G G G G G A G G A A G A G G G G G G
rs226566644
MGI SNP Detail
Alliance Variant		 Chr2:156963256 Rr374135 within coordinates of
Rr568440 413 bp proximal
Samhd1 Intron
 SNP A/T A A A A A A A A A A A A A A A A A A A T A A A A A A A A A A A A A A A A A A A A A A A A A A A A T A A A A
rs245774102
MGI SNP Detail
Alliance Variant		 Chr2:156963273 Rr374135 within coordinates of
Rr568440 396 bp proximal
Samhd1 Intron
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs579332990
MGI SNP Detail
Alliance Variant		 Chr2:156963326 Rr374135 within coordinates of
Rr568440 343 bp proximal
Samhd1 Intron
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs47849789
MGI SNP Detail
Alliance Variant		 Chr2:156963418 Rr374135 within coordinates of
Rr568440 251 bp proximal
Samhd1 Intron
 SNP A/C C C A A C
rs242797971
MGI SNP Detail
Alliance Variant		 Chr2:156963443 Rr374135 within coordinates of
Rr568440 226 bp proximal
Samhd1 Intron
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs27308029
MGI SNP Detail
Alliance Variant		 Chr2:156963455 Rr374135 within coordinates of
Rr568440 214 bp proximal
Samhd1 Intron
 SNP A/G A A A G A G A G G A G G G A A G A A
SNP ID
(GRCm39)		 Map Position
(GRCm39)		 Gene & Category Variation
Type		 Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
129X1/SvJ
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PL/J
PWD/PhJ
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs213127572
MGI SNP Detail
Alliance Variant		 Chr2:156963577 Rr374135 within coordinates of
Rr568440 92 bp proximal
Samhd1 Intron
 SNP C/T T T T T C T T T C C T T T T T T T T T T T T C C C T C C C T C T T C T T T T T T C T T C C T C T T T T T T
rs231671053
MGI SNP Detail
Alliance Variant		 Chr2:156963594 Rr374135 within coordinates of
Rr568440 75 bp proximal
Samhd1 Intron
 SNP A/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T A T T T T
rs252063803
MGI SNP Detail
Alliance Variant		 Chr2:156963601 Rr374135 within coordinates of
Rr568440 68 bp proximal
Samhd1 Intron
 SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs221077873
MGI SNP Detail
Alliance Variant		 Chr2:156963650 Rr374135 within coordinates of
Rr568440 19 bp proximal
Samhd1 Intron
 SNP A/G A A A A G A A A G A A A A A A A A A A A A G A A G G A A A G A A A A A A A A G G A A A A A A A
rs234900387
MGI SNP Detail
Alliance Variant		 Chr2:156963758 Rr374135 within coordinates of
Rr568440 within coordinates of
Samhd1 Coding-Synonymous
Samhd1 mRNA-UTR
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs13463210
MGI SNP Detail
Alliance Variant		 Chr2:156963809 Rr374135 within coordinates of
Rr568440 within coordinates of
Samhd1 Coding-Synonymous
Samhd1 mRNA-UTR
 SNP A/G G A
rs226863194
MGI SNP Detail
Alliance Variant		 Chr2:156963887 Rr374135 within coordinates of
Rr568440 within coordinates of
Samhd1 Intron
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs27308028
MGI SNP Detail
Alliance Variant		 Chr2:156963888 Rr374135 within coordinates of
Rr568440 within coordinates of
Samhd1 Intron
 SNP A/G G G G A G A G G G A G A A A G G G G G
rs29565794
MGI SNP Detail
Alliance Variant		 Chr2:156964018 Rr374135 within coordinates of
Rr568440 within coordinates of
Samhd1 Intron
 SNP A/G A A A G G A
rs219629863
MGI SNP Detail
Alliance Variant		 Chr2:156964026 Rr374135 within coordinates of
Rr568440 within coordinates of
Samhd1 Intron
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs47827945
MGI SNP Detail
Alliance Variant		 Chr2:156964027 Rr374135 within coordinates of
Rr568440 within coordinates of
Samhd1 Intron
 SNP A/G A A G G A
rs257691079
MGI SNP Detail
Alliance Variant		 Chr2:156964272 Rr374135 within coordinates of
Rr568440 204 bp distal
Samhd1 Intron
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs29779404
MGI SNP Detail
Alliance Variant		 Chr2:156964427 Rr374135 within coordinates of
Rr568440 359 bp distal
Samhd1 Intron
 SNP A/G G G G A A G
rs52291408
MGI SNP Detail
Alliance Variant		 Chr2:156964442 Rr374135 within coordinates of
Rr568440 374 bp distal
Samhd1 Intron
 SNP C/T C T
rs245756933
MGI SNP Detail
Alliance Variant		 Chr2:156964483 Rr374135 within coordinates of
Rr568440 415 bp distal
Samhd1 Intron
 SNP C/T C T
rs233624451
MGI SNP Detail
Alliance Variant		 Chr2:156964509 Rr374135 within coordinates of
Rr568440 441 bp distal
Samhd1 Intron
 SNP A/C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C A C C C C
rs252234267
MGI SNP Detail
Alliance Variant		 Chr2:156964571 Rr374135 within coordinates of
Rr568440 503 bp distal
Samhd1 Intron
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs212685116
MGI SNP Detail
Alliance Variant		 Chr2:156964583 Rr374135 within coordinates of
Rr568440 515 bp distal
Samhd1 Intron
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C
rs49243673
MGI SNP Detail
Alliance Variant		 Chr2:156964607 Rr374135 within coordinates of
Rr568440 539 bp distal
Samhd1 Intron
 SNP A/G G G A A G
rs245707332
MGI SNP Detail
Alliance Variant		 Chr2:156964703 Rr374135 within coordinates of
Rr568440 635 bp distal
Samhd1 Intron
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs215111041
MGI SNP Detail
Alliance Variant		 Chr2:156964741 Rr374135 within coordinates of
Rr568440 673 bp distal
Samhd1 Intron
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C
rs234760376
MGI SNP Detail
Alliance Variant		 Chr2:156964748 Rr374135 within coordinates of
Rr568440 680 bp distal
Samhd1 Intron
 SNP G/T G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G T G G G
rs27308027
MGI SNP Detail
Alliance Variant		 Chr2:156964839 Rr374135 within coordinates of
Rr568440 771 bp distal
Samhd1 Intron
 SNP G/T T T G T G T G G T G G G T T G T T
rs27308026
MGI SNP Detail
Alliance Variant		 Chr2:156965009 Rr568440 941 bp distal
Samhd1 Intron
 SNP C/T T T T C T C T C C C C C T T C T T
rs261679898
MGI SNP Detail
Alliance Variant		 Chr2:156965080 Rr568440 1012 bp distal
Samhd1 Intron
 SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
SNP ID
(GRCm39)		 Map Position
(GRCm39)		 Gene & Category Variation
Type		 Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
129X1/SvJ
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PL/J
PWD/PhJ
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs27308025
MGI SNP Detail
Alliance Variant		 Chr2:156965103 Rr568440 1035 bp distal
Samhd1 Intron
 SNP C/T C C C T C T C T C T T T C C T C C
rs238710816
MGI SNP Detail
Alliance Variant		 Chr2:156965119 Rr568440 1051 bp distal
Samhd1 Intron
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs251487301
MGI SNP Detail
Alliance Variant		 Chr2:156965268 Rr568440 1200 bp distal
Samhd1 Coding-NonSynonymous
Samhd1 Coding-Synonymous
Tssr27148 within coordinates of
 SNP C/T C C C C C C C C C C C C C C C C C C C T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C
rs221660947
MGI SNP Detail
Alliance Variant		 Chr2:156965280 Rr568440 1212 bp distal
Samhd1 Coding-NonSynonymous
Samhd1 Coding-Synonymous
 SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs250673680
MGI SNP Detail
Alliance Variant		 Chr2:156965310 Rr568440 1242 bp distal
Samhd1 Coding-NonSynonymous
Samhd1 Coding-Synonymous
Tssr27149 within coordinates of
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs263860784
MGI SNP Detail
Alliance Variant		 Chr2:156965535 Rr568440 1467 bp distal
Samhd1 Intron
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs234632532
MGI SNP Detail
Alliance Variant		 Chr2:156965536 Rr568440 1468 bp distal
Samhd1 Intron
 SNP C/T T T T T T T T T T T T T T T T T T T T C T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T
rs240898065
MGI SNP Detail
Alliance Variant		 Chr2:156965565 Rr568440 1497 bp distal
Samhd1 Intron
 SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs256606160
MGI SNP Detail
Alliance Variant		 Chr2:156965569 Rr568440 1501 bp distal
Samhd1 Intron
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs225541023
MGI SNP Detail
Alliance Variant		 Chr2:156965618 Rr568440 1550 bp distal
Samhd1 Intron
 SNP A/G G G G G G G G G G G G G G G G G G G G A G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G
rs245577297
MGI SNP Detail
Alliance Variant		 Chr2:156965650 Rr568440 1582 bp distal
Samhd1 Intron
 SNP G/T G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G T G G G G
rs215078154
MGI SNP Detail
Alliance Variant		 Chr2:156965669 Rr568440 1601 bp distal
Samhd1 Intron
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs232323492
MGI SNP Detail
Alliance Variant		 Chr2:156965672 Rr568440 1604 bp distal
Samhd1 Intron
 SNP A/C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C A C C C C
rs27308024
MGI SNP Detail
Alliance Variant		 Chr2:156965673 Rr568440 1605 bp distal
Samhd1 Intron
 SNP A/G G G G A G A G G A G A A A G G G G G
rs27308023
MGI SNP Detail
Alliance Variant		 Chr2:156965684 Rr568440 1616 bp distal
Samhd1 Intron
 SNP A/G A A A G A G A G G A G G G A A G A A
rs236406680
MGI SNP Detail
Alliance Variant		 Chr2:156965773 Rr568440 1705 bp distal
Samhd1 Intron
 SNP A/G G G G G G G G G G G G G G G G G G G G A G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G
rs256456208
MGI SNP Detail
Alliance Variant		 Chr2:156965828 Rr568440 1760 bp distal
Samhd1 Intron
 SNP A/T A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A T A A A A
rs213776044
MGI SNP Detail
Alliance Variant		 Chr2:156965841 Rr568440 1773 bp distal
Samhd1 Intron
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs232297976
MGI SNP Detail
Alliance Variant		 Chr2:156965867 Rr568440 1799 bp distal
Samhd1 Intron
 SNP C/T C C C C C C C C C C C C C C C C C C C T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C
rs51263561
MGI SNP Detail
Alliance Variant		 Chr2:156965872 Rr568440 1804 bp distal
Samhd1 Intron
 SNP G/T T T G G T
rs221636217
MGI SNP Detail
Alliance Variant		 Chr2:156965882 Rr568440 1814 bp distal
Samhd1 Intron
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs239857344
MGI SNP Detail
Alliance Variant		 Chr2:156965908 Rr568440 1840 bp distal
Samhd1 Intron
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs48983384
MGI SNP Detail
Alliance Variant		 Chr2:156965970 Rr568440 1902 bp distal
Samhd1 Intron
 SNP A/G G G A A G
rs46263984
MGI SNP Detail
Alliance Variant		 Chr2:156965989 Rr568440 1921 bp distal
Samhd1 Intron
 SNP A/G A G G A
rs27308022
MGI SNP Detail
Alliance Variant		 Chr2:156966064 Rr568440 1996 bp distal
Samhd1 Intron
 SNP A/G G G A G A G G A G A A G G G G G
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Showing SNP(s) 1 - 100 of 100
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
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Send questions and comments to User Support. 		last database update
03/18/2025
MGI 6.24 		The Jackson Laboratory