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Mouse SNP Summary
Symbol
Name
ID 		Rr569404
regulatory region 569404
MGI:8031536

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SNP ID
(GRCm39)		 Map Position
(GRCm39)		 Gene & Category Variation
Type		 Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
129X1/SvJ
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PL/J
PWD/PhJ
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs247351201
MGI SNP Detail
Alliance Variant		 Chr2:163379196 Hnf4a Intron
Hnf4aos within coordinates of
Rr569404 1971 bp proximal
 SNP A/G A G
rs264191984
MGI SNP Detail
Alliance Variant		 Chr2:163379230 Hnf4a Intron
Hnf4aos within coordinates of
Rr569404 1937 bp proximal
 SNP C/T C T
rs224164597
MGI SNP Detail
Alliance Variant		 Chr2:163379231 Hnf4a Intron
Hnf4aos within coordinates of
Rr569404 1936 bp proximal
 SNP A/G A G
rs237256130
MGI SNP Detail
Alliance Variant		 Chr2:163379283 Hnf4a Intron
Hnf4aos within coordinates of
Rr569404 1884 bp proximal
 SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs586818888
MGI SNP Detail
Alliance Variant		 Chr2:163379354 Hnf4a Intron
Hnf4aos within coordinates of
Rr569404 1813 bp proximal
 SNP A/G G G G G G G G G G G G G G G G G G G G A G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G
rs28281273
MGI SNP Detail
Alliance Variant		 Chr2:163379410 Hnf4a Intron
Hnf4aos within coordinates of
Rr569404 1757 bp proximal
 SNP A/G A A A G A A A A G
rs219504372
MGI SNP Detail
Alliance Variant		 Chr2:163379424 Hnf4a Intron
Hnf4aos within coordinates of
Rr569404 1743 bp proximal
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs257574775
MGI SNP Detail
Alliance Variant		 Chr2:163379465 Hnf4a Intron
Hnf4aos within coordinates of
Rr569404 1702 bp proximal
 SNP A/G G A
rs28281272
MGI SNP Detail
Alliance Variant		 Chr2:163379533 Hnf4a Intron
Hnf4aos within coordinates of
Rr569404 1634 bp proximal
 SNP A/G A A A G A A A A G
rs579811261
MGI SNP Detail
Alliance Variant		 Chr2:163379560 Hnf4a Intron
Hnf4aos within coordinates of
Rr569404 1607 bp proximal
 SNP G/T G G G G G G G G G G G G G G G G G G G T G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G
rs258943860
MGI SNP Detail
Alliance Variant		 Chr2:163379666 Hnf4a Intron
Hnf4aos within coordinates of
Rr569404 1501 bp proximal
 SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs232905528
MGI SNP Detail
Alliance Variant		 Chr2:163379685 Hnf4a Intron
Hnf4aos within coordinates of
Rr569404 1482 bp proximal
 SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs28281271
MGI SNP Detail
Alliance Variant		 Chr2:163379690 Hnf4a Intron
Hnf4aos within coordinates of
Rr569404 1477 bp proximal
 SNP C/T T T T C T T
rs266074450
MGI SNP Detail
Alliance Variant		 Chr2:163379742 Hnf4a Intron
Hnf4aos within coordinates of
Rr569404 1425 bp proximal
 SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs237384170
MGI SNP Detail
Alliance Variant		 Chr2:163379759 Hnf4a Intron
Hnf4aos within coordinates of
Rr569404 1408 bp proximal
 SNP A/C C A
rs227456092
MGI SNP Detail
Alliance Variant		 Chr2:163379764 Hnf4a Intron
Hnf4aos within coordinates of
Rr569404 1403 bp proximal
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs242716856
MGI SNP Detail
Alliance Variant		 Chr2:163379793 Hnf4a Intron
Hnf4aos within coordinates of
Rr569404 1374 bp proximal
 SNP G/T G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G T G G G G
rs256979601
MGI SNP Detail
Alliance Variant		 Chr2:163379808 Hnf4a Intron
Hnf4aos within coordinates of
Rr569404 1359 bp proximal
 SNP C/G C G
rs234388212
MGI SNP Detail
Alliance Variant		 Chr2:163379829 Hnf4a Intron
Hnf4aos within coordinates of
Rr569404 1338 bp proximal
 SNP A/C C A
rs244911430
MGI SNP Detail
Alliance Variant		 Chr2:163379848 Hnf4a Intron
Hnf4aos within coordinates of
Rr569404 1319 bp proximal
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs50889475
MGI SNP Detail
Alliance Variant		 Chr2:163379909 Hnf4a Intron
Hnf4aos within coordinates of
Rr569404 1258 bp proximal
 SNP C C C C
rs254998463
MGI SNP Detail
Alliance Variant		 Chr2:163379935 Hnf4a Intron
Hnf4aos within coordinates of
Rr569404 1232 bp proximal
 SNP A/G G A
rs583572364
MGI SNP Detail
Alliance Variant		 Chr2:163379953 Hnf4a Intron
Hnf4aos within coordinates of
Rr569404 1214 bp proximal
 SNP A/G A A A A A A A A A A A A A A A A A A A G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A
rs216206968
MGI SNP Detail
Alliance Variant		 Chr2:163379990 Hnf4a Intron
Hnf4aos within coordinates of
Rr569404 1177 bp proximal
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs216535820
MGI SNP Detail
Alliance Variant		 Chr2:163380023 Hnf4a Intron
Hnf4aos within coordinates of
Rr569404 1144 bp proximal
 SNP A/G G A
SNP ID
(GRCm39)		 Map Position
(GRCm39)		 Gene & Category Variation
Type		 Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
129X1/SvJ
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PL/J
PWD/PhJ
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs241424894
MGI SNP Detail
Alliance Variant		 Chr2:163380026 Hnf4a Intron
Hnf4aos within coordinates of
Rr569404 1141 bp proximal
 SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs28281270
MGI SNP Detail
Alliance Variant		 Chr2:163380039 Hnf4a Intron
Hnf4aos within coordinates of
Rr569404 1128 bp proximal
 SNP C/T T C T T T T C
rs219304279
MGI SNP Detail
Alliance Variant		 Chr2:163380058 Hnf4a Intron
Hnf4aos within coordinates of
Rr569404 1109 bp proximal
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs244183544
MGI SNP Detail
Alliance Variant		 Chr2:163380081 Hnf4a Intron
Hnf4aos within coordinates of
Rr569404 1086 bp proximal
 SNP A/G A G
rs230043327
MGI SNP Detail
Alliance Variant		 Chr2:163380091 Hnf4a Intron
Hnf4aos within coordinates of
Rr569404 1076 bp proximal
 SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs213347402
MGI SNP Detail
Alliance Variant		 Chr2:163380104 Hnf4a Intron
Hnf4aos within coordinates of
Rr569404 1063 bp proximal
 SNP A/G G A
rs28281269
MGI SNP Detail
Alliance Variant		 Chr2:163380144 Hnf4a Intron
Hnf4aos within coordinates of
Rr569404 1023 bp proximal
 SNP A/G G G G A G G G
rs231879648
MGI SNP Detail
Alliance Variant		 Chr2:163380302 Hnf4a Intron
Hnf4aos within coordinates of
Rr569404 865 bp proximal
 SNP A/G G A
rs250475754
MGI SNP Detail
Alliance Variant		 Chr2:163380324 Hnf4a Intron
Hnf4aos within coordinates of
Rr569404 843 bp proximal
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs219646970
MGI SNP Detail
Alliance Variant		 Chr2:163380330 Hnf4a Intron
Hnf4aos within coordinates of
Rr569404 837 bp proximal
 SNP A/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T A T T T T
rs232974815
MGI SNP Detail
Alliance Variant		 Chr2:163380346 Hnf4a Intron
Hnf4aos within coordinates of
Rr569404 821 bp proximal
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs28281268
MGI SNP Detail
Alliance Variant		 Chr2:163380369 Hnf4a Intron
Hnf4aos within coordinates of
Rr569404 798 bp proximal
 SNP A/C A A A C A A A
rs247951408
MGI SNP Detail
Alliance Variant		 Chr2:163380375 Hnf4a Intron
Hnf4aos within coordinates of
Rr569404 792 bp proximal
 SNP A/G G A
rs28281267
MGI SNP Detail
Alliance Variant		 Chr2:163380393 Hnf4a Intron
Hnf4aos within coordinates of
Rr569404 774 bp proximal
 SNP A/C A A C A A A A C
rs28281266
MGI SNP Detail
Alliance Variant		 Chr2:163380469 Hnf4a Intron
Hnf4aos within coordinates of
Rr569404 698 bp proximal
 SNP C/T T T T C T T T T C
rs28281265
MGI SNP Detail
Alliance Variant		 Chr2:163380483 Hnf4a Intron
Hnf4aos within coordinates of
Rr569404 684 bp proximal
 SNP A/G A G A A A G
rs264366696
MGI SNP Detail
Alliance Variant		 Chr2:163380567 Hnf4a Intron
Hnf4aos within coordinates of
Rr569404 600 bp proximal
 SNP A/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T A T T T T
rs219773539
MGI SNP Detail
Alliance Variant		 Chr2:163380622 Hnf4a Intron
Hnf4aos within coordinates of
Rr569404 545 bp proximal
 SNP A/C A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A C A A A A
rs579064993
MGI SNP Detail
Alliance Variant		 Chr2:163380680 Hnf4a Intron
Hnf4aos within coordinates of
Rr569404 487 bp proximal
 SNP C/G G G G G G G G G G G G G G G G G G G G C G G C G G G G C C G G G G G G G G G G G G G G G G G G G G G G G
rs582598318
MGI SNP Detail
Alliance Variant		 Chr2:163380689 Hnf4a Intron
Hnf4aos within coordinates of
Rr569404 478 bp proximal
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs236474449
MGI SNP Detail
Alliance Variant		 Chr2:163380706 Hnf4a Intron
Hnf4aos within coordinates of
Rr569404 461 bp proximal
 SNP C/T C C C C C C C C C C C C C C C C C C C T C C T C C C C T T C C C C C C C C C C C C C C C C C C C T C C C C
rs255042236
MGI SNP Detail
Alliance Variant		 Chr2:163380712 Hnf4a Intron
Hnf4aos within coordinates of
Rr569404 455 bp proximal
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs585228457
MGI SNP Detail
Alliance Variant		 Chr2:163380736 Hnf4a Intron
Hnf4aos within coordinates of
Rr569404 431 bp proximal
 SNP C/G G G G G G G G G G G G G G G G G G G G C G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G
rs225785740
MGI SNP Detail
Alliance Variant		 Chr2:163380828 Hnf4a Intron
Hnf4aos within coordinates of
Rr569404 339 bp proximal
 SNP G/T G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G T G G G G
rs245012338
MGI SNP Detail
Alliance Variant		 Chr2:163380885 Hnf4a Intron
Hnf4aos within coordinates of
Rr569404 282 bp proximal
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
SNP ID
(GRCm39)		 Map Position
(GRCm39)		 Gene & Category Variation
Type		 Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
129X1/SvJ
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PL/J
PWD/PhJ
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs265600574
MGI SNP Detail
Alliance Variant		 Chr2:163380937 Hnf4a Intron
Hnf4aos within coordinates of
Rr569404 230 bp proximal
 SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs232776055
MGI SNP Detail
Alliance Variant		 Chr2:163380952 Hnf4a Intron
Hnf4aos within coordinates of
Rr569404 215 bp proximal
 SNP A/C A A A A A A A A A A A A A A A A A A A C A A C A A A A C C A A A A A A A A A A A A A A A A A C A A A A
rs578406929
MGI SNP Detail
Alliance Variant		 Chr2:163380993 Hnf4a Intron
Hnf4aos within coordinates of
Rr569404 174 bp proximal
 SNP A/C C C C C C C C C C C C C C C C C C C C A C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C
rs582086719
MGI SNP Detail
Alliance Variant		 Chr2:163381003 Hnf4a Intron
Hnf4aos within coordinates of
Rr569404 164 bp proximal
 SNP C/T T T T T T T T T T T T T T T T T T T T C T T C T T T T C C T T T T T T T T T T T T T T T T T T T T T T T
rs45935160
MGI SNP Detail
Alliance Variant		 Chr2:163381026 Hnf4a Intron
Hnf4aos within coordinates of
Rr569404 141 bp proximal
 SNP C/T T C
rs259442256
MGI SNP Detail
Alliance Variant		 Chr2:163381112 Hnf4a Intron
Hnf4aos within coordinates of
Rr569404 55 bp proximal
 SNP A/T T T T T T T T T T T T T T T T T T T T A T T A T T T T A A T T T T T T T T T T T T T T T T T T T A T T T T
rs585564655
MGI SNP Detail
Alliance Variant		 Chr2:163381124 Hnf4a Intron
Hnf4aos within coordinates of
Rr569404 43 bp proximal
 SNP A/C A A A A A A A A A A A A A A A A A A A C A A C A A A A C C A A A A A A A A A A A A A A A A A A A A A A A A
rs219628649
MGI SNP Detail
Alliance Variant		 Chr2:163381129 Hnf4a Intron
Hnf4aos within coordinates of
Rr569404 38 bp proximal
 SNP A/G A A A A A A A A A A A A A A A A A A A G A A G A A A A G G A A A A A A A A A A A A A A A A A A A G A A A A
rs230007975
MGI SNP Detail
Alliance Variant		 Chr2:163381135 Hnf4a Intron
Hnf4aos within coordinates of
Rr569404 32 bp proximal
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs224058997
MGI SNP Detail
Alliance Variant		 Chr2:163381220 Hnf4a Intron
Hnf4aos within coordinates of
Rr569404 within coordinates of
 SNP G/T G T
rs213848536
MGI SNP Detail
Alliance Variant		 Chr2:163381245 Hnf4a Intron
Hnf4aos within coordinates of
Rr569404 within coordinates of
 SNP C/T T T T T T T T T T T T T T T T T T T T C T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs232928002
MGI SNP Detail
Alliance Variant		 Chr2:163381310 Hnf4a Intron
Hnf4aos within coordinates of
Rr569404 within coordinates of
 SNP A/G A A A A A A A A A A A A A A A A A A A G A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs246318745
MGI SNP Detail
Alliance Variant		 Chr2:163381435 Hnf4a Intron
Hnf4aos within coordinates of
Rr569404 within coordinates of
 SNP A/T T A
rs225108580
MGI SNP Detail
Alliance Variant		 Chr2:163381442 Hnf4a Intron
Hnf4aos within coordinates of
Rr569404 within coordinates of
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs239472746
MGI SNP Detail
Alliance Variant		 Chr2:163381445 Hnf4a Intron
Hnf4aos within coordinates of
Rr569404 within coordinates of
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs264127474
MGI SNP Detail
Alliance Variant		 Chr2:163381457 Hnf4a Intron
Hnf4aos within coordinates of
Rr569404 within coordinates of
 SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs217871936
MGI SNP Detail
Alliance Variant		 Chr2:163381521 Hnf4a Intron
Hnf4aos within coordinates of
Rr569404 within coordinates of
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs236598440
MGI SNP Detail
Alliance Variant		 Chr2:163381607 Hnf4a Intron
Hnf4aos within coordinates of
Rr569404 within coordinates of
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs255130335
MGI SNP Detail
Alliance Variant		 Chr2:163381616 Hnf4a Intron
Hnf4aos within coordinates of
Rr569404 within coordinates of
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs579774697
MGI SNP Detail
Alliance Variant		 Chr2:163381673 Hnf4a Intron
Hnf4aos within coordinates of
Rr569404 within coordinates of
 SNP C/T C C C C C C C C C C C C C C C C C C C T C C T C C C C T T C C C C C C C C C C C C C C C C C C C C C C C
rs251239742
MGI SNP Detail
Alliance Variant		 Chr2:163381690 Hnf4a Intron
Hnf4aos within coordinates of
Rr569404 within coordinates of
 SNP C/G C G
rs219905680
MGI SNP Detail
Alliance Variant		 Chr2:163381696 Hnf4a Intron
Hnf4aos within coordinates of
Rr569404 within coordinates of
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs582298565
MGI SNP Detail
Alliance Variant		 Chr2:163381713 Hnf4a Intron
Hnf4aos within coordinates of
Rr569404 within coordinates of
 SNP A/G A A A A A A A A A A A A A A A A A A A G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A
rs247409043
MGI SNP Detail
Alliance Variant		 Chr2:163381772 Hnf4a Intron
Hnf4aos within coordinates of
Rr569404 within coordinates of
 SNP A/C A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A C A A A A
rs28281264
MGI SNP Detail
Alliance Variant		 Chr2:163381840 Hnf4a Intron
Hnf4aos within coordinates of
Rr569404 within coordinates of
 SNP C/T T T T C T T T
SNP ID
(GRCm39)		 Map Position
(GRCm39)		 Gene & Category Variation
Type		 Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
129X1/SvJ
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PL/J
PWD/PhJ
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs220335271
MGI SNP Detail
Alliance Variant		 Chr2:163381852 Hnf4a Intron
Hnf4aos within coordinates of
Rr569404 within coordinates of
 SNP C/T C T
rs254297621
MGI SNP Detail
Alliance Variant		 Chr2:163381894 Hnf4a Intron
Hnf4aos within coordinates of
Rr569404 26 bp distal
 SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs266208010
MGI SNP Detail
Alliance Variant		 Chr2:163381960 Hnf4a Intron
Hnf4aos within coordinates of
Rr569404 92 bp distal
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs224458488
MGI SNP Detail
Alliance Variant		 Chr2:163382007 Hnf4a Intron
Hnf4aos within coordinates of
Rr569404 139 bp distal
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs237299372
MGI SNP Detail
Alliance Variant		 Chr2:163382078 Hnf4a Intron
Hnf4aos within coordinates of
Rr569404 210 bp distal
 SNP A/G A G
rs256919469
MGI SNP Detail
Alliance Variant		 Chr2:163382098 Hnf4a Intron
Hnf4aos within coordinates of
Rr569404 230 bp distal
 SNP C/T C T
rs233250665
MGI SNP Detail
Alliance Variant		 Chr2:163382182 Hnf4a Intron
Hnf4aos within coordinates of
Rr569404 314 bp distal
Rr569405 within coordinates of
 SNP A/G G A
rs28281263
MGI SNP Detail
Alliance Variant		 Chr2:163382201 Hnf4a Intron
Hnf4aos within coordinates of
Rr569404 333 bp distal
Rr569405 within coordinates of
 SNP A/G A A A G A A A A G
rs263293261
MGI SNP Detail
Alliance Variant		 Chr2:163382211 Hnf4a Intron
Hnf4aos within coordinates of
Rr569404 343 bp distal
Rr569405 within coordinates of
 SNP A/G G A
rs257294227
MGI SNP Detail
Alliance Variant		 Chr2:163382233 Hnf4a Intron
Hnf4aos within coordinates of
Rr569404 365 bp distal
Rr569405 within coordinates of
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs216801823
MGI SNP Detail
Alliance Variant		 Chr2:163382243 Hnf4a Intron
Hnf4aos within coordinates of
Rr569404 375 bp distal
Rr569405 within coordinates of
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs233499813
MGI SNP Detail
Alliance Variant		 Chr2:163382268 Hnf4a Intron
Hnf4aos within coordinates of
Rr569404 400 bp distal
Rr569405 within coordinates of
 SNP C/G C G
rs260851307
MGI SNP Detail
Alliance Variant		 Chr2:163382271 Hnf4a Intron
Hnf4aos within coordinates of
Rr569404 403 bp distal
Rr569405 within coordinates of
 SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs585648460
MGI SNP Detail
Alliance Variant		 Chr2:163382275 Hnf4a Intron
Hnf4aos within coordinates of
Rr569404 407 bp distal
Rr569405 within coordinates of
 SNP A/C C C C C C C C C C C C C C C C C C C C A C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C
rs212082760
MGI SNP Detail
Alliance Variant		 Chr2:163382296 Hnf4a Intron
Hnf4aos within coordinates of
Rr569404 428 bp distal
Rr569405 within coordinates of
 SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs230592797
MGI SNP Detail
Alliance Variant		 Chr2:163382397 Hnf4a Intron
Hnf4aos within coordinates of
Rr569404 529 bp distal
Rr569405 within coordinates of
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs249613099
MGI SNP Detail
Alliance Variant		 Chr2:163382577 Hnf4a Intron
Hnf4aos within coordinates of
Rr569404 709 bp distal
Rr569405 within coordinates of
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs580214731
MGI SNP Detail
Alliance Variant		 Chr2:163382690 Hnf4a Intron
Hnf4aos within coordinates of
Rr569404 822 bp distal
Rr569405 within coordinates of
 SNP A/G G G G G G G G G G G G G G G G G G G G A G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G
rs244173234
MGI SNP Detail
Alliance Variant		 Chr2:163383052 Hnf4a Intron
Hnf4aos within coordinates of
Rr569404 1184 bp distal
Rr569405 within coordinates of
 SNP C/G G C
rs219832915
MGI SNP Detail
Alliance Variant		 Chr2:163383163 Hnf4a Intron
Hnf4aos within coordinates of
Rr569404 1295 bp distal
Rr569405 within coordinates of
 SNP A/C A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A C A A A A
rs28281262
MGI SNP Detail
Alliance Variant		 Chr2:163383250 Hnf4a Intron
Hnf4aos within coordinates of
Rr569404 1382 bp distal
Rr569405 within coordinates of
 SNP A/G G G A G G G G G
rs28281261
MGI SNP Detail
Alliance Variant		 Chr2:163383354 Hnf4a Intron
Hnf4aos within coordinates of
Rr569404 1486 bp distal
Rr569405 within coordinates of
 SNP A/C A C A C C A C A A A A C
rs244927164
MGI SNP Detail
Alliance Variant		 Chr2:163383457 Hnf4a Intron
Hnf4aos within coordinates of
Rr569404 1589 bp distal
Rr569405 within coordinates of
 SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs263147915
MGI SNP Detail
Alliance Variant		 Chr2:163383476 Hnf4a Intron
Hnf4aos within coordinates of
Rr569404 1608 bp distal
Rr569405 within coordinates of
 SNP G/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T G T T T T
rs256790518
MGI SNP Detail
Alliance Variant		 Chr2:163383496 Hnf4a Intron
Hnf4aos within coordinates of
Rr569404 1628 bp distal
Rr569405 within coordinates of
 SNP A/G G A
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Showing SNP(s) 1 - 100 of 103
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
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Send questions and comments to User Support. 		last database update
03/18/2025
MGI 6.24 		The Jackson Laboratory