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Mouse SNP Summary
Symbol
Name
ID
Rr569594
regulatory region 569594
MGI:8031726

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SNP ID
(GRCm39)
Map Position
(GRCm39)
Gene & Category Variation
Type
Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
129X1/SvJ
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PL/J
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs236130839
MGI SNP Detail
Alliance Variant
Chr2:164228888 Rr569592 within coordinates of
Rr569594 1997 bp proximal
Slpi Intron
Slpi Noncoding-Transcript-Variant
SNP A/G G G G G G G G G G G G G G G G G G G G A G G A G G G G A A G G G G G G G G G G G A G G G G G G G G G G G G
rs260173451
MGI SNP Detail
Alliance Variant
Chr2:164228910 Rr569592 within coordinates of
Rr569594 1975 bp proximal
Slpi Intron
Slpi Noncoding-Transcript-Variant
SNP C/T C C C C C C C C C C C C C C C C C C C T C C T C C C C T T C C C C C C C C C C C T C C C C C C C C C C C C
rs228834797
MGI SNP Detail
Alliance Variant
Chr2:164228933 Rr569592 within coordinates of
Rr569594 1952 bp proximal
Slpi Intron
Slpi Noncoding-Transcript-Variant
SNP G/T G G G G G G G G G G G G G G G G G G G T G G T G G G G T T G G G G G G G G G G G T G G G G G G G G G G G G
rs246349216
MGI SNP Detail
Alliance Variant
Chr2:164228954 Rr569592 within coordinates of
Rr569594 1931 bp proximal
Slpi Intron
Slpi Noncoding-Transcript-Variant
SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs257703275
MGI SNP Detail
Alliance Variant
Chr2:164228959 Rr569592 within coordinates of
Rr569594 1926 bp proximal
Slpi Intron
Slpi Noncoding-Transcript-Variant
SNP A/G G G G G G G G G G G G G G G G G G G G A G G A G G G G A A G G G G G G G G G G G A G G G G G G G A G G G G
rs231772444
MGI SNP Detail
Alliance Variant
Chr2:164229000 Rr569592 within coordinates of
Rr569594 1885 bp proximal
Slpi Intron
Slpi Noncoding-Transcript-Variant
SNP G/T G G G G G G G G G G G G G G G G G G G T G G T G G G G T T G G G G G G G G G G G T G G G G G G G T G G G G
rs251263626
MGI SNP Detail
Alliance Variant
Chr2:164229012 Rr569592 within coordinates of
Rr569594 1873 bp proximal
Slpi Intron
Slpi Noncoding-Transcript-Variant
SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs213917919
MGI SNP Detail
Alliance Variant
Chr2:164229034 Rr569592 within coordinates of
Rr569594 1851 bp proximal
Slpi Intron
Slpi Noncoding-Transcript-Variant
SNP C/G G G G G G G G G G G G G G G G G G G G C G G C G G G G C C G G G G G G G G G G G C G G G G G G G C G G G G
rs235297238
MGI SNP Detail
Alliance Variant
Chr2:164229051 Rr569592 within coordinates of
Rr569593 within coordinates of
Rr569594 1834 bp proximal
Slpi Intron
Slpi Noncoding-Transcript-Variant
SNP C/T C C C C C C C C C C C C C C C C C C C T C C T C C C C T T C C C C C C C C C C C T C C C C C C C T C C C C
rs243411364
MGI SNP Detail
Alliance Variant
Chr2:164229142 Rr569592 within coordinates of
Rr569594 1743 bp proximal
Slpi Intron
Slpi Noncoding-Transcript-Variant
SNP G/T T T T T T T T T T T T T T T T T T T T G T T G T T T T G G T T T T T T T T T T T G T T T T T T T G T T T T
rs217331199
MGI SNP Detail
Alliance Variant
Chr2:164229266 Rr569594 1619 bp proximal
Slpi Intron
Slpi Noncoding-Transcript-Variant
SNP A/C A A A A A A A A A A A A A A A A A A A C A A C A A A A C C A A A A A A A A A A A C A A A A A A A A A A A A
rs33697195
MGI SNP Detail
Alliance Variant
Chr2:164229289 Rr569594 1596 bp proximal
Slpi Intron
Slpi Noncoding-Transcript-Variant
SNP C/T T T C T T T
rs253586274
MGI SNP Detail
Alliance Variant
Chr2:164229339 Rr569594 1546 bp proximal
Slpi Intron
Slpi Noncoding-Transcript-Variant
SNP C/G C C C C C C C C C C C C C C C C C C C G C C G C C C C G G C C C C C C C C C C C G C C C C C C C G C C C C
rs29825833
MGI SNP Detail
Alliance Variant
Chr2:164229348 Rr569594 1537 bp proximal
Slpi Intron
Slpi Noncoding-Transcript-Variant
SNP C/T C C T C C C
rs239088120
MGI SNP Detail
Alliance Variant
Chr2:164229349 Rr569594 1536 bp proximal
Slpi Intron
Slpi Noncoding-Transcript-Variant
SNP A/G G G G G G G G G G G G G G G G G G G G A G G A G G G G A A G G G G G G G G G G G A G G G G G G G G G G G G
rs28244798
MGI SNP Detail
Alliance Variant
Chr2:164229412 Rr569594 1473 bp proximal
Slpi Intron
Slpi Noncoding-Transcript-Variant
SNP C/T C C T C T T C C C C C T C
rs221271112
MGI SNP Detail
Alliance Variant
Chr2:164229439 Rr569594 1446 bp proximal
Slpi Intron
Slpi Noncoding-Transcript-Variant
SNP C/T T T T T T T T T T T T T T T T T T T T C T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T
rs583110438
MGI SNP Detail
Alliance Variant
Chr2:164229474 Rr569594 1411 bp proximal
Slpi Intron
Slpi Noncoding-Transcript-Variant
SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs586597413
MGI SNP Detail
Alliance Variant
Chr2:164229480 Rr569594 1405 bp proximal
Slpi Intron
Slpi Noncoding-Transcript-Variant
SNP C/G G G G G G G G G G G G G G G G G G G G G G G C G G G G G G G G G G G G G G G G G C G G G G G G G G G G G G
rs579764621
MGI SNP Detail
Alliance Variant
Chr2:164229501 Rr569594 1384 bp proximal
Slpi Intron
Slpi Noncoding-Transcript-Variant
SNP G/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T G T T T T
rs28244797
MGI SNP Detail
Alliance Variant
Chr2:164229551 Rr569594 1334 bp proximal
Slpi Intron
Slpi Noncoding-Transcript-Variant
SNP C/T T T T T T T T C T T T C T T T T
rs260136851
MGI SNP Detail
Alliance Variant
Chr2:164229552 Rr569594 1333 bp proximal
Slpi Intron
Slpi Noncoding-Transcript-Variant
SNP A/G A A A A A A A A A A A A A A A A A A A G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A
rs222192390
MGI SNP Detail
Alliance Variant
Chr2:164229563 Rr569594 1322 bp proximal
Slpi Intron
Slpi Noncoding-Transcript-Variant
SNP C/T C C C C C C C C C C C C C C C C C C C C C C T C C C C T T C C C C C C C C C C C T C C C C C C C T C C C C
rs240385599
MGI SNP Detail
Alliance Variant
Chr2:164229573 Rr569594 1312 bp proximal
Slpi Intron
Slpi Noncoding-Transcript-Variant
SNP C/T T T T T T T T T T T T T T T T T T T T C T T C T T T T C C T T T T T T T T T T T C T T T T T T T C T T T T
rs265607894
MGI SNP Detail
Alliance Variant
Chr2:164229583 Rr569594 1302 bp proximal
Slpi Intron
Slpi Noncoding-Transcript-Variant
SNP A/T T T T T T T T T T T T T T T T T T T T T T T A T T T T A A T T T T T T T T T T T A T T T T T T T T T T T T
SNP ID
(GRCm39)
Map Position
(GRCm39)
Gene & Category Variation
Type
Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
129X1/SvJ
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PL/J
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs231296235
MGI SNP Detail
Alliance Variant
Chr2:164229626 Rr569594 1259 bp proximal
Slpi Intron
Slpi Noncoding-Transcript-Variant
SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs246485981
MGI SNP Detail
Alliance Variant
Chr2:164229678 Rr569594 1207 bp proximal
Slpi Intron
Slpi Noncoding-Transcript-Variant
SNP C/T C C C C C C C C C C C C C C C C C C C C C C T C C C C T T C C C C C C C C C C C T C C C C C C C C C C C C
rs29730725
MGI SNP Detail
Alliance Variant
Chr2:164229695 Rr569594 1190 bp proximal
Slpi Intron
Slpi Noncoding-Transcript-Variant
SNP C/T T C C C C
rs228958802
MGI SNP Detail
Alliance Variant
Chr2:164229752 Rr569594 1133 bp proximal
Slpi Intron
Slpi Noncoding-Transcript-Variant
SNP A/G A A A A A A A A A A A A A A A A A A A A A A G A A A A G G A A A A A A A A A A A G A A A A A A A A A A A A
rs243323447
MGI SNP Detail
Alliance Variant
Chr2:164229808 Rr569594 1077 bp proximal
Slpi Intron
Slpi Noncoding-Transcript-Variant
SNP A/G/T A A A A A A A A A A A A A A A A A A A G A A T A A A A T T A A A A A A A A A A A T A A A A A A A G A A A A
rs217254206
MGI SNP Detail
Alliance Variant
Chr2:164229828 Rr569594 1057 bp proximal
Slpi Intron
Slpi Noncoding-Transcript-Variant
SNP A/G G G G G G G G G G G G G G G G G G G G G G G A G G G G A A G G G G G G G G G G G A G G G G G G G G G G G G
rs228488148
MGI SNP Detail
Alliance Variant
Chr2:164229864 Rr569594 1021 bp proximal
Slpi Intron
Slpi Noncoding-Transcript-Variant
SNP G/T G G G G G G G G G G G G G G G G G G G T G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G
rs247192752
MGI SNP Detail
Alliance Variant
Chr2:164229874 Rr569594 1011 bp proximal
Slpi Intron
Slpi Noncoding-Transcript-Variant
SNP A/G G G G G G G G G G G G G G G G G G G G A G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G
rs216125809
MGI SNP Detail
Alliance Variant
Chr2:164229894 Rr569594 991 bp proximal
Slpi Intron
Slpi Noncoding-Transcript-Variant
SNP A/T A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A T A A A A
rs236997940
MGI SNP Detail
Alliance Variant
Chr2:164229918 Rr569594 967 bp proximal
Slpi Intron
Slpi Noncoding-Transcript-Variant
SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs262056173
MGI SNP Detail
Alliance Variant
Chr2:164229933 Rr569594 952 bp proximal
Slpi Intron
Slpi Noncoding-Transcript-Variant
SNP A/G G G G G G G G G G G G G G G G G G G G A G G A G G G G A A G G G G G G G G G G G A G G G G G G G G G G G G
rs212943361
MGI SNP Detail
Alliance Variant
Chr2:164229937 Rr569594 948 bp proximal
Slpi Intron
Slpi Noncoding-Transcript-Variant
SNP C/T C C C C C C C C C C C C C C C C C C C T C C T C C C C T T C C C C C C C C C C C T C C C C C C C T C C C C
rs230113981
MGI SNP Detail
Alliance Variant
Chr2:164229984 Rr569594 901 bp proximal
Slpi Intron
Slpi Noncoding-Transcript-Variant
SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs253366016
MGI SNP Detail
Alliance Variant
Chr2:164229988 Rr569594 897 bp proximal
Slpi Intron
Slpi Noncoding-Transcript-Variant
SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs222161311
MGI SNP Detail
Alliance Variant
Chr2:164229996 Rr569594 889 bp proximal
Slpi Intron
Slpi Noncoding-Transcript-Variant
SNP G/T G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G T G G G G
rs240295538
MGI SNP Detail
Alliance Variant
Chr2:164229998 Rr569594 887 bp proximal
Slpi Intron
Slpi Noncoding-Transcript-Variant
SNP C/T C C C C C C C C C C C C C C C C C C C T C C T C C C C T T C C C C C C C C C C C T C C C C C C C T C C C C
rs258942986
MGI SNP Detail
Alliance Variant
Chr2:164230020 Rr569594 865 bp proximal
Slpi Intron
Slpi Noncoding-Transcript-Variant
SNP A/G G G G G G G G G G G G G G G G G G G G A G G A G G G G A A G G G G G G G G G G G A G G G G G G G A G G G G
rs223609955
MGI SNP Detail
Alliance Variant
Chr2:164230021 Rr569594 864 bp proximal
Slpi Intron
Slpi Noncoding-Transcript-Variant
SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs243670184
MGI SNP Detail
Alliance Variant
Chr2:164230032 Rr569594 853 bp proximal
Slpi Intron
Slpi Noncoding-Transcript-Variant
SNP C/T T T T T T T T T T T T T T T T T T T T T T T C T T T T C C T T T T T T T T T T T C T T T T T T T T T T T T
rs264974859
MGI SNP Detail
Alliance Variant
Chr2:164230038 Rr569594 847 bp proximal
Slpi Intron
Slpi Noncoding-Transcript-Variant
SNP A/G A A A A A A A A A A A A A A A A A A A G A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs224671304
MGI SNP Detail
Alliance Variant
Chr2:164230081 Rr569594 804 bp proximal
Slpi Intron
Slpi Noncoding-Transcript-Variant
SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A G G A A A A A A A A A A A A A A A A A A A G A A A A
rs236939270
MGI SNP Detail
Alliance Variant
Chr2:164230114 Rr569594 771 bp proximal
Slpi Intron
Slpi Noncoding-Transcript-Variant
SNP A/G A A A A A A A A A A A A A A A A A A A A A A G A A A A G G A A A A A A A A A A A G A A A A A A A A A A A A
rs261105541
MGI SNP Detail
Alliance Variant
Chr2:164230121 Rr569594 764 bp proximal
Slpi Intron
Slpi Noncoding-Transcript-Variant
SNP C/T T T T T T T T T T T T T T T T T T T T C T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T
rs583482124
MGI SNP Detail
Alliance Variant
Chr2:164230158 Rr569594 727 bp proximal
Slpi Intron
Slpi Noncoding-Transcript-Variant
SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs228438615
MGI SNP Detail
Alliance Variant
Chr2:164230195 Rr569594 690 bp proximal
Slpi Intron
Slpi Noncoding-Transcript-Variant
SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
SNP ID
(GRCm39)
Map Position
(GRCm39)
Gene & Category Variation
Type
Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
129X1/SvJ
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PL/J
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs258062004
MGI SNP Detail
Alliance Variant
Chr2:164230254 Rr569594 631 bp proximal
Slpi Intron
Slpi Noncoding-Transcript-Variant
SNP A/C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C A C C C C
rs215635263
MGI SNP Detail
Alliance Variant
Chr2:164230276 Rr569594 609 bp proximal
Slpi Intron
Slpi Noncoding-Transcript-Variant
SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs231126815
MGI SNP Detail
Alliance Variant
Chr2:164230277 Rr569594 608 bp proximal
Slpi Intron
Slpi Noncoding-Transcript-Variant
SNP G/T G G G G G G G G G G G G G G G G G G G G G G T G G G G G G G G G G G G G G G G G T G G G G G G G G G G G G
rs250690403
MGI SNP Detail
Alliance Variant
Chr2:164230288 Rr569594 597 bp proximal
Slpi Intron
Slpi Noncoding-Transcript-Variant
SNP C/T C C C C C C C C C C C C C C C C C C C C C C T C C C C C C C C C C C C C C C C C T C C C C C C C C C C C C
rs33296661
MGI SNP Detail
Alliance Variant
Chr2:164230302 Rr569594 583 bp proximal
Slpi Intron
Slpi Noncoding-Transcript-Variant
SNP C/T C C C T C C C
rs230080915
MGI SNP Detail
Alliance Variant
Chr2:164230309 Rr569594 576 bp proximal
Slpi Intron
Slpi Noncoding-Transcript-Variant
SNP A/G A A A A A A A A A A A A A A A A A A A G A A G A A A A G G A A A A A A A A A A A G A A A A A A A G A A A A
rs253288455
MGI SNP Detail
Alliance Variant
Chr2:164230319 Rr569594 566 bp proximal
Slpi Intron
Slpi Noncoding-Transcript-Variant
SNP A/G G G G G G G G G G G G G G G G G G G G G G G A G G G G A A G G G G G G G G G G G A G G G G G G G G G G G G
rs216812517
MGI SNP Detail
Alliance Variant
Chr2:164230417 Rr569594 468 bp proximal
Slpi Intron
Slpi Noncoding-Transcript-Variant
SNP A/T T T T T T T T T T T T T T T T T T T T A T T A T T T T A A T T T T T T T T T T T A T T T T T T T A T T T T
rs233772889
MGI SNP Detail
Alliance Variant
Chr2:164230438 Rr569594 447 bp proximal
Slpi Intron
Slpi Noncoding-Transcript-Variant
SNP C/T T T T T T T T T T T T T T T T T T T T C T T T T T T T T T T T T T T T T T T T T T T T T T T T T T
rs263047654
MGI SNP Detail
Alliance Variant
Chr2:164230570 Rr569594 315 bp proximal
Slpi Intron
Slpi Noncoding-Transcript-Variant
SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs223768918
MGI SNP Detail
Alliance Variant
Chr2:164230573 Rr569594 312 bp proximal
Slpi Intron
Slpi Noncoding-Transcript-Variant
SNP A/T T T T T T T T T T T T T T T T T T T T A T T A T T T T A A T T T T T T T T T T T A T T T T T T T A T T T T
rs246339525
MGI SNP Detail
Alliance Variant
Chr2:164230596 Rr569594 289 bp proximal
Slpi Intron
Slpi Noncoding-Transcript-Variant
SNP C/T T T T T T T T T T T T T T T T T T T T C T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T
rs256689298
MGI SNP Detail
Alliance Variant
Chr2:164230627 Rr569594 258 bp proximal
Slpi Intron
Slpi Noncoding-Transcript-Variant
SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs218547264
MGI SNP Detail
Alliance Variant
Chr2:164230690 Rr569594 195 bp proximal
Slpi Intron
Slpi Noncoding-Transcript-Variant
SNP C/T C C C C C C C C C C C C C C C C C C C T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C
rs29716530
MGI SNP Detail
Alliance Variant
Chr2:164230696 Rr569594 189 bp proximal
Slpi Intron
Slpi Noncoding-Transcript-Variant
SNP C/T C C T C C C
rs32828585
MGI SNP Detail
Alliance Variant
Chr2:164230709 Rr569594 176 bp proximal
Slpi Intron
Slpi Noncoding-Transcript-Variant
SNP C/T C C T C C C
rs222442572
MGI SNP Detail
Alliance Variant
Chr2:164230723 Rr569594 162 bp proximal
Slpi Intron
Slpi Noncoding-Transcript-Variant
SNP C/T C C C C C C C C C C C C C C C C C C C T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C
rs246147676
MGI SNP Detail
Alliance Variant
Chr2:164230760 Rr569594 125 bp proximal
Slpi mRNA-UTR
Slpi Noncoding-Transcript-Variant
SNP A/G G G G G G G G G G G G G G G G G G G G A G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G
rs33520930
MGI SNP Detail
Alliance Variant
Chr2:164230782 Rr569594 103 bp proximal
Slpi mRNA-UTR
Slpi Noncoding-Transcript-Variant
SNP A/G G G A G G G
rs230783524
MGI SNP Detail
Alliance Variant
Chr2:164230788 Rr569594 97 bp proximal
Slpi mRNA-UTR
Slpi Noncoding-Transcript-Variant
SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs255197385
MGI SNP Detail
Alliance Variant
Chr2:164230816 Rr569594 69 bp proximal
Slpi mRNA-UTR
Slpi Noncoding-Transcript-Variant
SNP A/T A A A A A A A A A A A A A A A A A A A A A A T A A A A A A A A A A A A A A A A A T A A A A A A A A A A A A
rs254590715
MGI SNP Detail
Alliance Variant
Chr2:164230832 Rr569594 53 bp proximal
Slpi mRNA-UTR
Slpi Noncoding-Transcript-Variant
SNP A/G A A A A A A A A A A A A A A A A A A A G A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs223510558
MGI SNP Detail
Alliance Variant
Chr2:164230848 Rr569594 37 bp proximal
Slpi mRNA-UTR
Slpi Noncoding-Transcript-Variant
SNP C/T C C C C C C C C C C C C C C C C C C C T C C T C C C C T T C C C C C C C C C C C T C C C C C C C T C C C C
rs247514357
MGI SNP Detail
Alliance Variant
Chr2:164230868 Rr569594 17 bp proximal
Slpi mRNA-UTR
Slpi Noncoding-Transcript-Variant
SNP A/G A A A A A A A A A A A A A A A A A A A G A A G A A A A G G A A A A A A A A A A A G A A A A A A A G A A A A
rs216776382
MGI SNP Detail
Alliance Variant
Chr2:164230896 Rr569594 within coordinates of
Slpi mRNA-UTR
Slpi Noncoding-Transcript-Variant
SNP A/T A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A T A A A A
SNP ID
(GRCm39)
Map Position
(GRCm39)
Gene & Category Variation
Type
Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
129X1/SvJ
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PL/J
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs587110119
MGI SNP Detail
Alliance Variant
Chr2:164230936 Rr569594 30 bp distal
Slpi mRNA-UTR
Slpi Noncoding-Transcript-Variant
SNP A/C C C C C C C C C C C C C C C C C C C C C C C A C C C C A A C C C C C C C C C C C A C C C C C C C C C C C C
rs241266742
MGI SNP Detail
Chr2:164231107 Rr569594 201 bp distal
SNP A/G G G G G G G G G G G G G G G G G G G G A G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G
rs252456570
MGI SNP Detail
Chr2:164231133 Rr569594 227 bp distal
SNP A/G A A A A A A A A A A A A A A A A A A A G A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs215460892
MGI SNP Detail
Chr2:164231242 Cpgi12651 within coordinates of
Rr569594 336 bp distal
SNP A/G A A A A A A A A A A A A A A A A A A A G A A G A A A A G G A A A A A A A A A A A G A A A A A A A G A A A A
rs236478260
MGI SNP Detail
Chr2:164231259 Cpgi12651 within coordinates of
Rr569594 353 bp distal
SNP C/T C C C C C C C C C C C C C C C C C C C C C C T C C C C T T C C C C C C C C C C C T C C C C C C C C C C C C
rs261733103
MGI SNP Detail
Chr2:164231261 Cpgi12651 within coordinates of
Rr569594 355 bp distal
SNP C/T C C C C C C C C C C C C C C C C C C C C C C T C C C C T T C C C C C C C C C C T C C C C C C C C C C C C
rs218468338
MGI SNP Detail
Chr2:164231290 Cpgi12651 within coordinates of
Rr569594 384 bp distal
SNP A/G G G G G G G G G G G G G G G G G G G A G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs236813769
MGI SNP Detail
Alliance Variant
Chr2:164231395 Cpgi12651 within coordinates of
Matn4 mRNA-UTR
Rr569594 489 bp distal
SNP A/T A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A T A A A A
rs254918435
MGI SNP Detail
Alliance Variant
Chr2:164231400 Cpgi12651 within coordinates of
Matn4 mRNA-UTR
Rr569594 494 bp distal
SNP A/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T A T T T T
rs222348781
MGI SNP Detail
Alliance Variant
Chr2:164231431 Cpgi12651 within coordinates of
Matn4 mRNA-UTR
Rr569594 525 bp distal
SNP A/G A A A A A A A A A A A A A A A A A A A G A A A A A A A G G A A A A A A A A A A A A A A A A A A A A A A A A
rs248581106
MGI SNP Detail
Alliance Variant
Chr2:164231438 Cpgi12651 within coordinates of
Matn4 mRNA-UTR
Rr569594 532 bp distal
SNP A/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T A T T T T
rs263075756
MGI SNP Detail
Alliance Variant
Chr2:164231538 Cpgi12651 within coordinates of
Matn4 mRNA-UTR
Rr569594 632 bp distal
SNP C/T C C C C C C C C C C C C C C C C C C C T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C
rs222919554
MGI SNP Detail
Alliance Variant
Chr2:164231544 Cpgi12651 within coordinates of
Matn4 mRNA-UTR
Rr569594 638 bp distal
SNP C/T T T T T T T T T T T T T T T T T T T T C T T T T T T T C C T T T T T T T T T T T T T T T T T T C T T T T
rs242950068
MGI SNP Detail
Alliance Variant
Chr2:164231547 Cpgi12651 within coordinates of
Matn4 mRNA-UTR
Rr569594 641 bp distal
SNP C/G C C C C C C C C C C C C C C C C C C C G C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C
rs254554944
MGI SNP Detail
Alliance Variant
Chr2:164231552 Cpgi12651 within coordinates of
Matn4 mRNA-UTR
Rr569594 646 bp distal
SNP A/G G G G G G G G G G G G G G G G G G G G A G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G
rs223479007
MGI SNP Detail
Alliance Variant
Chr2:164231567 Cpgi12651 within coordinates of
Matn4 mRNA-UTR
Rr569594 661 bp distal
SNP A/G G G G G G G G G G G G G G G G G G G G A G G G G G G G A A G G G G G G G G G G G G G G G G G G G G G G G
rs247425290
MGI SNP Detail
Alliance Variant
Chr2:164231702 Cpgi12651 within coordinates of
Matn4 Intron
Rr569594 796 bp distal
SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs29538224
MGI SNP Detail
Alliance Variant
Chr2:164231703 Cpgi12651 within coordinates of
Matn4 Intron
Rr569594 797 bp distal
SNP A/C A A A C A A A
rs232475027
MGI SNP Detail
Alliance Variant
Chr2:164231707 Cpgi12651 within coordinates of
Matn4 Intron
Matn4 Splice-Site
Rr569594 801 bp distal
SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs257429414
MGI SNP Detail
Alliance Variant
Chr2:164231846 Cpgi12651 within coordinates of
Matn4 Intron
Rr569594 940 bp distal
SNP A/G A A A A A A A A A A A A A A A A A A A G A A G A A A A G G A A A A A A A A A A A G A A A A A A A G A A A A
rs214931841
MGI SNP Detail
Alliance Variant
Chr2:164231849 Cpgi12651 within coordinates of
Matn4 Intron
Rr569594 943 bp distal
SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs238334984
MGI SNP Detail
Alliance Variant
Chr2:164231855 Cpgi12651 within coordinates of
Matn4 Intron
Rr569594 949 bp distal
SNP A/G G G G G G G G G G G G G G G G G G G G A G G A G G G G A A G G G G G G G G G G G A G G G G G G G A G G G G
rs581394665
MGI SNP Detail
Alliance Variant
Chr2:164231856 Cpgi12651 within coordinates of
Matn4 Intron
Rr569594 950 bp distal
SNP A/G A A A A A A A A A A A A A A A A A A A A A A G A A A A A A A A A A A A A A A A A G A A A A A A A A A A A A
rs244536810
MGI SNP Detail
Alliance Variant
Chr2:164231857 Cpgi12651 within coordinates of
Matn4 Intron
Rr569594 951 bp distal
SNP A/G A A A A A A A A A A A A A A A A A A A G A A G A A A A G G A A A A A A A A A A A G A A A A A A A G A A A A
rs585354794
MGI SNP Detail
Alliance Variant
Chr2:164231861 Cpgi12651 within coordinates of
Matn4 Intron
Rr569594 955 bp distal
SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A A A A A A A A A
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Showing SNP(s) 1 - 100 of 128

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
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last database update
03/25/2025
MGI 6.24
The Jackson Laboratory