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Mouse SNP Summary
Symbol
Name
ID
Rr569623
regulatory region 569623
MGI:8031755

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SNP ID
(GRCm39)
Map Position
(GRCm39)
Gene & Category Variation
Type
Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
129X1/SvJ
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PL/J
PWD/PhJ
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs258503460
MGI SNP Detail
Chr2:164296452 Rr569622 within coordinates of
Rr569623 1954 bp proximal
SNP G/T T T T T T T T T T T T T T T T T T T T T T G T T T T T T T T T T T T T T T T T T T T T T T T T T G T T T G
rs587432307
MGI SNP Detail
Chr2:164296465 Rr569622 within coordinates of
Rr569623 1941 bp proximal
SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs223037331
MGI SNP Detail
Chr2:164296529 Rr569622 within coordinates of
Rr569623 1877 bp proximal
SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs238825662
MGI SNP Detail
Chr2:164296602 Rr569622 within coordinates of
Rr569623 1804 bp proximal
SNP C/T C C C C C C C C C C C C C C C C C C C C C T C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C
rs256798323
MGI SNP Detail
Chr2:164296605 Rr569622 within coordinates of
Rr569623 1801 bp proximal
SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs224240260
MGI SNP Detail
Chr2:164296666 Rr569622 within coordinates of
Rr569623 1740 bp proximal
SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs242844231
MGI SNP Detail
Chr2:164296672 Rr569622 within coordinates of
Rr569623 1734 bp proximal
SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G A A G G G G G G G G G G G A G G G G G G G G G G G G
rs265961394
MGI SNP Detail
Chr2:164296733 Rr569622 within coordinates of
Rr569623 1673 bp proximal
SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs27348217
MGI SNP Detail
Chr2:164296772 Rr569622 within coordinates of
Rr569623 1634 bp proximal
SNP C/T T T T T T T C T T C C C T T T C C C T
rs257507956
MGI SNP Detail
Chr2:164296774 Rr569622 within coordinates of
Rr569623 1632 bp proximal
SNP G/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T G T T T T
rs27348216
MGI SNP Detail
Chr2:164297055 Rr569622 within coordinates of
Rr569623 1351 bp proximal
SNP A/G G G G G G G G G G G G G G A G
rs225650494
MGI SNP Detail
Chr2:164297077 Rr569622 within coordinates of
Rr569623 1329 bp proximal
SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs579577730
MGI SNP Detail
Chr2:164297136 Rr569622 within coordinates of
Rr569623 1270 bp proximal
SNP A/T T T T T T T T T T T T T T T T T T T T T T A T T T T T A A T T T T T T T T T T T A T T T T T T T T T T A
rs243382649
MGI SNP Detail
Chr2:164297145 Rr569622 within coordinates of
Rr569623 1261 bp proximal
SNP C/T T T T T T T T T T T T T T T T T T T T T T C T T T T T C C T T T T T T T T T T T C T T T T T T C T T T C
rs212471833
MGI SNP Detail
Chr2:164297146 Rr569622 within coordinates of
Rr569623 1260 bp proximal
SNP C/T T T T T T T T T T T T T T T T T T T T T T C T T T T T C C T T T T T T T T T T T C T T T T T T C T T T C
rs229620434
MGI SNP Detail
Chr2:164297169 Rr569622 within coordinates of
Rr569623 1237 bp proximal
SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs260651920
MGI SNP Detail
Chr2:164297230 Rr569622 within coordinates of
Rr569623 1176 bp proximal
SNP A/C A A A A A A A A A A A A A A A A A A A A A C A A A A A C C A A A A A A A A A A A C A A A A A A A A A A A C
rs217745926
MGI SNP Detail
Chr2:164297316 Rr569622 within coordinates of
Rr569623 1090 bp proximal
SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs238439179
MGI SNP Detail
Chr2:164297322 Rr569622 within coordinates of
Rr569623 1084 bp proximal
SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs262796345
MGI SNP Detail
Chr2:164297412 Rr569623 994 bp proximal
SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A G G A A A A A A A A A A A G A A A A A A A G A A A A
rs220162004
MGI SNP Detail
Chr2:164297561 Rr569623 845 bp proximal
SNP A/C A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A C A A A A
rs238731715
MGI SNP Detail
Chr2:164297635 Rr569623 771 bp proximal
SNP A/C A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A C A A A
rs250360740
MGI SNP Detail
Chr2:164297688 Rr569623 718 bp proximal
SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C T T C C C C C C C C C C C T C C C C C C C C C C C C
rs218146925
MGI SNP Detail
Chr2:164297699 Rr569623 707 bp proximal
SNP C/G C C C C C C C C C C C C C C C C C C C C C C C C C C C G G C C C C C C C C C C C G C C C C C C C G C C C C
rs27348215
MGI SNP Detail
Alliance Variant
Chr2:164297810 Rr569623 596 bp proximal
Sys1 mRNA-UTR
SNP A/G A A A A A A A A A G A A A G A
SNP ID
(GRCm39)
Map Position
(GRCm39)
Gene & Category Variation
Type
Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
129X1/SvJ
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PL/J
PWD/PhJ
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs264047166
MGI SNP Detail
Alliance Variant
Chr2:164297816 Rr569623 590 bp proximal
Sys1 mRNA-UTR
SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs225354941
MGI SNP Detail
Alliance Variant
Chr2:164297847 Rr569623 559 bp proximal
Sys1 mRNA-UTR
SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs245496500
MGI SNP Detail
Alliance Variant
Chr2:164298236 Rr569623 170 bp proximal
Sys1 mRNA-UTR
SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs265335836
MGI SNP Detail
Alliance Variant
Chr2:164298291 Rr569623 115 bp proximal
Sys1 mRNA-UTR
SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A G G A A A A A A A A A A A G A A A A A A A A A A A A
rs225559402
MGI SNP Detail
Alliance Variant
Chr2:164298296 Rr569623 110 bp proximal
Sys1 mRNA-UTR
SNP G/T G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G T G G G G
rs243346750
MGI SNP Detail
Alliance Variant
Chr2:164298451 Rr569623 within coordinates of
Sys1 mRNA-UTR
SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs254222911
MGI SNP Detail
Alliance Variant
Chr2:164298491 Rr569623 within coordinates of
Sys1 mRNA-UTR
SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G A A G G G G G G G G G G G A G G G G G G G A G G G G
rs229545233
MGI SNP Detail
Alliance Variant
Chr2:164298592 Rr569623 within coordinates of
Sys1 mRNA-UTR
SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs259701551
MGI SNP Detail
Alliance Variant
Chr2:164298687 Rr569623 within coordinates of
Sys1 mRNA-UTR
SNP G/T G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G T G G G G
rs217530429
MGI SNP Detail
Alliance Variant
Chr2:164298698 Rr569623 within coordinates of
Sys1 mRNA-UTR
SNP G/T G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G T G G G G
rs240643800
MGI SNP Detail
Alliance Variant
Chr2:164298740 Rr569623 within coordinates of
Sys1 mRNA-UTR
SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs252009598
MGI SNP Detail
Alliance Variant
Chr2:164298869 Rr397476 within coordinates of
Rr569623 within coordinates of
Sys1 mRNA-UTR
Tssr21592 within coordinates of
SNP C/T T T T T T T T T T T T T T T T T T T T C T T C T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs214187951
MGI SNP Detail
Alliance Variant
Chr2:164298918 Rr397476 within coordinates of
Rr569623 12 bp distal
Rr569624 within coordinates of
Sys1 mRNA-UTR
Sys1 Noncoding-Transcript-Variant
SNP A/C A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A C A A A A
rs231510335
MGI SNP Detail
Alliance Variant
Chr2:164298945 Rr397476 within coordinates of
Rr569623 39 bp distal
Rr569624 within coordinates of
Sys1 mRNA-UTR
Sys1 Noncoding-Transcript-Variant
SNP A/C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C A C C C C C C C C C C C
rs250324405
MGI SNP Detail
Alliance Variant
Chr2:164298985 Rr397476 within coordinates of
Rr569623 79 bp distal
Rr569624 within coordinates of
Sys1 Intron
Sys1 Noncoding-Transcript-Variant
SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs218069681
MGI SNP Detail
Alliance Variant
Chr2:164298991 Rr397476 within coordinates of
Rr569623 85 bp distal
Rr569624 within coordinates of
Sys1 Intron
Sys1 Noncoding-Transcript-Variant
SNP C/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G C G G G G
rs240269653
MGI SNP Detail
Alliance Variant
Chr2:164299013 Rr397476 within coordinates of
Rr569623 107 bp distal
Rr569624 within coordinates of
Sys1 Intron
Sys1 mRNA-UTR
Sys1 Noncoding-Transcript-Variant
SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs263760982
MGI SNP Detail
Alliance Variant
Chr2:164299055 Rr569623 149 bp distal
Rr569624 within coordinates of
Sys1 Intron
Sys1 Noncoding-Transcript-Variant
SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs225007526
MGI SNP Detail
Alliance Variant
Chr2:164299083 Rr569623 177 bp distal
Rr569624 within coordinates of
Sys1 Intron
Sys1 Noncoding-Transcript-Variant
SNP A/C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C A C C C C
rs583004399
MGI SNP Detail
Alliance Variant
Chr2:164299112 Rr569623 206 bp distal
Rr569624 within coordinates of
Rr569625 within coordinates of
Sys1 Intron
Sys1 Noncoding-Transcript-Variant
SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs247910903
MGI SNP Detail
Alliance Variant
Chr2:164299185 Rr569623 279 bp distal
Rr569624 within coordinates of
Sys1 Intron
Sys1 Noncoding-Transcript-Variant
SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs262846366
MGI SNP Detail
Alliance Variant
Chr2:164299231 Rr569623 325 bp distal
Rr569624 within coordinates of
Sys1 Intron
Sys1 Noncoding-Transcript-Variant
SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs586561850
MGI SNP Detail
Alliance Variant
Chr2:164299298 Rr569623 392 bp distal
Rr569624 within coordinates of
Sys1 Intron
Sys1 Noncoding-Transcript-Variant
SNP C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C
rs580899717
MGI SNP Detail
Alliance Variant
Chr2:164299306 Rr569623 400 bp distal
Rr569624 within coordinates of
Sys1 Intron
Sys1 Noncoding-Transcript-Variant
SNP C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C
rs219535755
MGI SNP Detail
Alliance Variant
Chr2:164299312 Rr569623 406 bp distal
Rr569624 within coordinates of
Sys1 Intron
Sys1 Noncoding-Transcript-Variant
SNP T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T
SNP ID
(GRCm39)
Map Position
(GRCm39)
Gene & Category Variation
Type
Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
129X1/SvJ
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PL/J
PWD/PhJ
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs584613918
MGI SNP Detail
Alliance Variant
Chr2:164299321 Rr569623 415 bp distal
Rr569624 within coordinates of
Sys1 Intron
Sys1 Noncoding-Transcript-Variant
SNP A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A
rs236901204
MGI SNP Detail
Alliance Variant
Chr2:164299398 Rr569623 492 bp distal
Rr569624 within coordinates of
Sys1 Intron
Sys1 Noncoding-Transcript-Variant
SNP T T T T T T T T T T T T T T T T T T T
rs587438034
MGI SNP Detail
Alliance Variant
Chr2:164299453 Rr569623 547 bp distal
Rr569624 within coordinates of
Sys1 Intron
Sys1 Noncoding-Transcript-Variant
SNP T T T T T T T T T T T T T
rs387866451
MGI SNP Detail
Alliance Variant
Chr2:164299460 Rr569623 554 bp distal
Rr569624 within coordinates of
Sys1 Intron
Sys1 Noncoding-Transcript-Variant
SNP A A A A
rs387197553
MGI SNP Detail
Alliance Variant
Chr2:164299468 Rr569623 562 bp distal
Rr569624 within coordinates of
Sys1 Intron
Sys1 Noncoding-Transcript-Variant
SNP T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T
rs579198314
MGI SNP Detail
Alliance Variant
Chr2:164299479 Rr569623 573 bp distal
Rr569624 within coordinates of
Sys1 Intron
Sys1 Noncoding-Transcript-Variant
SNP C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C
rs254136098
MGI SNP Detail
Alliance Variant
Chr2:164299540 Rr569623 634 bp distal
Rr569624 within coordinates of
Sys1 Intron
Sys1 Noncoding-Transcript-Variant
Sys1 Splice-Site
SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs581841446
MGI SNP Detail
Alliance Variant
Chr2:164299736 Rr569623 830 bp distal
Rr569624 within coordinates of
Sys1 Intron
Sys1 mRNA-UTR
Sys1 Noncoding-Transcript-Variant
SNP T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T
rs229511533
MGI SNP Detail
Alliance Variant
Chr2:164299752 Rr569623 846 bp distal
Rr569624 within coordinates of
Sys1 Intron
Sys1 mRNA-UTR
Sys1 Noncoding-Transcript-Variant
SNP C/T T T T C C C C C C T T C C C C C C T C T T T T C T T T T C C T C T T T C C C T C C T T C T
rs254278669
MGI SNP Detail
Alliance Variant
Chr2:164299760 Rr569623 854 bp distal
Rr569624 within coordinates of
Sys1 Intron
Sys1 mRNA-UTR
Sys1 Noncoding-Transcript-Variant
SNP C/T T T T C C C C C C T T T C C C C C C T T C T T T T C T T T T C C T C T T T T C C C T C C T T C T
rs584102990
MGI SNP Detail
Alliance Variant
Chr2:164299771 Rr569623 865 bp distal
Rr569624 within coordinates of
Sys1 Intron
Sys1 mRNA-UTR
Sys1 Noncoding-Transcript-Variant
SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs265812290
MGI SNP Detail
Alliance Variant
Chr2:164299794 Rr569623 888 bp distal
Rr569624 within coordinates of
Sys1 Intron
Sys1 mRNA-UTR
Sys1 Noncoding-Transcript-Variant
SNP C/T T T T T T T T T T T T T T T T T T T T C T T T T T T T C C T T T T T T T T T T C T T T T T T C T T T T
rs33302184
MGI SNP Detail
Alliance Variant
Chr2:164299795 Rr569623 889 bp distal
Rr569624 within coordinates of
Sys1 Intron
Sys1 mRNA-UTR
Sys1 Noncoding-Transcript-Variant
SNP A/G G A G A G
rs256861775
MGI SNP Detail
Alliance Variant
Chr2:164299822 Rr569623 916 bp distal
Rr569624 within coordinates of
Sys1 Intron
Sys1 mRNA-UTR
Sys1 Noncoding-Transcript-Variant
SNP C/G C C C C C C C C C C C C C C C C C C C C C C C C C C C G G C C C C C C C C C C G C C C C C C C C C C C
rs578719705
MGI SNP Detail
Alliance Variant
Chr2:164300037 Rr569623 1131 bp distal
Rr569624 within coordinates of
Sys1 Intron
Sys1 Noncoding-Transcript-Variant
SNP C/T C C C C C C C C C C C C C C C C C C C T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C
rs214154285
MGI SNP Detail
Alliance Variant
Chr2:164300091 Rr569623 1185 bp distal
Rr569624 within coordinates of
Sys1 Intron
Sys1 Noncoding-Transcript-Variant
SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs231375847
MGI SNP Detail
Alliance Variant
Chr2:164300159 Rr569623 1253 bp distal
Rr569624 within coordinates of
Sys1 Intron
Sys1 Noncoding-Transcript-Variant
SNP A/C/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A C
rs244092248
MGI SNP Detail
Alliance Variant
Chr2:164300172 Rr569623 1266 bp distal
Rr569624 within coordinates of
Sys1 Intron
Sys1 Noncoding-Transcript-Variant
SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs211937069
MGI SNP Detail
Alliance Variant
Chr2:164300180 Rr569623 1274 bp distal
Rr569624 within coordinates of
Sys1 Intron
Sys1 Noncoding-Transcript-Variant
SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs242909314
MGI SNP Detail
Alliance Variant
Chr2:164300233 Rr569623 1327 bp distal
Rr569624 within coordinates of
Sys1 Intron
Sys1 Noncoding-Transcript-Variant
SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs582419474
MGI SNP Detail
Alliance Variant
Chr2:164300284 Rr569623 1378 bp distal
Rr569624 within coordinates of
Sys1 Intron
Sys1 Noncoding-Transcript-Variant
SNP C/T C C C C C C C C C C C C C C C C C C C T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C
rs585731694
MGI SNP Detail
Alliance Variant
Chr2:164300297 Rr569623 1391 bp distal
Rr569624 within coordinates of
Sys1 Intron
Sys1 Noncoding-Transcript-Variant
SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs260201304
MGI SNP Detail
Alliance Variant
Chr2:164300317 Rr569623 1411 bp distal
Rr569624 within coordinates of
Sys1 Intron
Sys1 Noncoding-Transcript-Variant
SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C C C C C C C C C
rs225201170
MGI SNP Detail
Alliance Variant
Chr2:164300363 Rr569623 1457 bp distal
Rr569624 within coordinates of
Sys1 Intron
Sys1 Noncoding-Transcript-Variant
SNP G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G
rs237928568
MGI SNP Detail
Alliance Variant
Chr2:164300425 Rr569623 1519 bp distal
Rr569624 within coordinates of
Sys1 Intron
Sys1 Noncoding-Transcript-Variant
SNP A/T A A A A A A A A A A A A A A A A A A A A A A A A A A A T T A A A A A A A A A A A T A A A A A A A A A A A A
SNP ID
(GRCm39)
Map Position
(GRCm39)
Gene & Category Variation
Type
Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
129X1/SvJ
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PL/J
PWD/PhJ
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs580336053
MGI SNP Detail
Alliance Variant
Chr2:164300441 Rr569623 1535 bp distal
Rr569624 within coordinates of
Sys1 Intron
Sys1 Noncoding-Transcript-Variant
SNP A/C A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A C A A A A
rs250532172
MGI SNP Detail
Alliance Variant
Chr2:164300446 Rr569623 1540 bp distal
Rr569624 within coordinates of
Sys1 Intron
Sys1 Noncoding-Transcript-Variant
SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs219470829
MGI SNP Detail
Alliance Variant
Chr2:164300456 Rr569623 1550 bp distal
Rr569624 within coordinates of
Sys1 Intron
Sys1 Noncoding-Transcript-Variant
SNP A/T A A A A A A A A A A A A A A A A A A A T A A A A A A A T T A A A A A A A A A A A T A A A A A A A T A A A A
rs582476129
MGI SNP Detail
Alliance Variant
Chr2:164300457 Rr569623 1551 bp distal
Rr569624 within coordinates of
Sys1 Intron
Sys1 Noncoding-Transcript-Variant
SNP A/G A A A A A A A A A A A A A A A A A A A G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A
rs236863308
MGI SNP Detail
Alliance Variant
Chr2:164300512 Rr569623 1606 bp distal
Rr569624 within coordinates of
Sys1 Intron
Sys1 Noncoding-Transcript-Variant
SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs248373434
MGI SNP Detail
Alliance Variant
Chr2:164300583 Rr569623 1677 bp distal
Rr569624 within coordinates of
Sys1 Intron
Sys1 Noncoding-Transcript-Variant
SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs226981604
MGI SNP Detail
Alliance Variant
Chr2:164300620 Rr569623 1714 bp distal
Rr569624 within coordinates of
Sys1 Intron
Sys1 Noncoding-Transcript-Variant
SNP C/G C C C C C C C C C C C C C C C C C C C C C C G C C C C C C C C C C C C C C C C C C C C C C C C C G C C C C
rs586044818
MGI SNP Detail
Alliance Variant
Chr2:164300621 Rr569623 1715 bp distal
Rr569624 within coordinates of
Sys1 Intron
Sys1 Noncoding-Transcript-Variant
SNP A/C A A A A A A A A A A A A A A A A A A A C A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A
rs250512399
MGI SNP Detail
Alliance Variant
Chr2:164300664 Rr569623 1758 bp distal
Rr569624 within coordinates of
Sys1 Intron
Sys1 Noncoding-Transcript-Variant
SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs232976291
MGI SNP Detail
Alliance Variant
Chr2:164300756 Rr569623 1850 bp distal
Rr569624 within coordinates of
Sys1 Intron
Sys1 Noncoding-Transcript-Variant
SNP A/G A G
rs232604973
MGI SNP Detail
Alliance Variant
Chr2:164300785 Rr569623 1879 bp distal
Rr569624 within coordinates of
Sys1 Intron
Sys1 Noncoding-Transcript-Variant
SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs244659861
MGI SNP Detail
Alliance Variant
Chr2:164300817 Rr569623 1911 bp distal
Rr569624 within coordinates of
Sys1 Intron
Sys1 Noncoding-Transcript-Variant
SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs258007216
MGI SNP Detail
Alliance Variant
Chr2:164300833 Rr569623 1927 bp distal
Rr569624 within coordinates of
Sys1 Intron
Sys1 Noncoding-Transcript-Variant
SNP C/T C C C C C C C C C C C C C C C C C C C C C C T C C C C T T C C C C C C C C C C T C C C C C C T C C C C
rs225474827
MGI SNP Detail
Alliance Variant
Chr2:164300890 Rr569623 1984 bp distal
Rr569624 within coordinates of
Sys1 Intron
Sys1 Noncoding-Transcript-Variant
SNP C/G/T C C C C C C C C C C C C C C C C C C C C C C C C C C C T T C C C C C C C C C C T C C C C C C G C C C C
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Showing SNP(s) 1 - 89 of 89

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
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last database update
03/25/2025
MGI 6.24
The Jackson Laboratory