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Mouse SNP Summary
Symbol
Name
ID 		Rr569778
regulatory region 569778
MGI:8031910

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SNP ID
(GRCm39)		 Map Position
(GRCm39)		 Gene & Category Variation
Type		 Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
129X1/SvJ
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BLKS/J
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
DDK/Pas
FVB/NJ
I/LnJ
JF1/Ms
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MAI/Pas
MA/MyJ
MOLF/EiJ
MSM/Ms
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PERA/EiJ
PL/J
PWD/Ph
PWD/PhJ
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SEG/Pas
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs256841816
MGI SNP Detail
Alliance Variant		 Chr2:164793378 Mmp9 Intron
Rr569778 1972 bp proximal
 SNP A/C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C A C C C C
rs47925935
MGI SNP Detail
Alliance Variant		 Chr2:164793385 Mmp9 Intron
Rr569778 1965 bp proximal
 SNP A/C A C C A C
rs237279530
MGI SNP Detail
Alliance Variant		 Chr2:164793395 Mmp9 Intron
Rr569778 1955 bp proximal
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs585689165
MGI SNP Detail
Alliance Variant		 Chr2:164793444 Mmp9 Intron
Rr569778 1906 bp proximal
 SNP A/C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C A C C C C
rs28262059
MGI SNP Detail
Alliance Variant		 Chr2:164793456 Mmp9 Intron
Rr569778 1894 bp proximal
 SNP C/T T T C T C C C C C C T T T C T C T
rs47604790
MGI SNP Detail
Alliance Variant		 Chr2:164793477 Mmp9 Intron
Rr569778 1873 bp proximal
 SNP C/T C T T C T
rs48858329
MGI SNP Detail
Alliance Variant		 Chr2:164793482 Mmp9 Intron
Rr569778 1868 bp proximal
 SNP C/T C T T C T
rs218113713
MGI SNP Detail
Alliance Variant		 Chr2:164793488 Mmp9 Intron
Rr569778 1862 bp proximal
 SNP A/T T T T T T T T T T T T T T T T T T T T T T T A T T T T A A T T T T T T T T T T T A T T T T T T T T T T T T
rs51461944
MGI SNP Detail
Alliance Variant		 Chr2:164793498 Mmp9 Intron
Rr569778 1852 bp proximal
 SNP C/T C T T C T
rs246606921
MGI SNP Detail
Alliance Variant		 Chr2:164793514 Mmp9 Intron
Rr569778 1836 bp proximal
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs214466422
MGI SNP Detail
Alliance Variant		 Chr2:164793516 Mmp9 Intron
Rr569778 1834 bp proximal
 SNP G/T T T T T T T T T T T T T T T T T T T T G T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T
rs28262058
MGI SNP Detail
Alliance Variant		 Chr2:164793549 Mmp9 Intron
Rr569778 1801 bp proximal
 SNP A/T A A T A T T A T T A A T T T T A
rs28262057
MGI SNP Detail
Alliance Variant		 Chr2:164793602 Mmp9 Intron
Rr569778 1748 bp proximal
 SNP C/T T T C T C C C C T T C C T
rs212311043
MGI SNP Detail
Alliance Variant		 Chr2:164793621 Mmp9 Intron
Rr569778 1729 bp proximal
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs243354648
MGI SNP Detail
Alliance Variant		 Chr2:164793631 Mmp9 Intron
Rr569778 1719 bp proximal
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs46045073
MGI SNP Detail
Alliance Variant		 Chr2:164793643 Mmp9 Intron
Rr569778 1707 bp proximal
 SNP A/G G A A G A
rs217941602
MGI SNP Detail
Alliance Variant		 Chr2:164793717 Mmp9 Intron
Rr569778 1633 bp proximal
 SNP A/G A G
rs239588535
MGI SNP Detail
Alliance Variant		 Chr2:164793742 Mmp9 Intron
Rr569778 1608 bp proximal
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G A G G G G A A G G G G G G G G G G G A G G G G G G G G G G G G
rs250973001
MGI SNP Detail
Alliance Variant		 Chr2:164793782 Mmp9 Intron
Rr569778 1568 bp proximal
 SNP C/T T T T T T T T T T T T T T T T T T T T T T T C T T T T C C T T T T T T T T T T T C T T T T T T T T T T T T
rs219739206
MGI SNP Detail
Alliance Variant		 Chr2:164793793 Mmp9 Intron
Rr569778 1557 bp proximal
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G A G G G G A A G G G G G G G G G G G A G G G G G G G G G G G G
rs48492159
MGI SNP Detail
Alliance Variant		 Chr2:164793807 Mmp9 Intron
Rr569778 1543 bp proximal
 SNP C/G C G G C G
rs264793711
MGI SNP Detail
Alliance Variant		 Chr2:164793875 Mmp9 Intron
Rr569776 within coordinates of
Rr569778 1475 bp proximal
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs227527838
MGI SNP Detail
Alliance Variant		 Chr2:164793945 Mmp9 Intron
Rr569778 1405 bp proximal
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs50063564
MGI SNP Detail
Alliance Variant		 Chr2:164793988 Mmp9 Intron
Rr569778 1362 bp proximal
 SNP C/T C T C
rs47522373
MGI SNP Detail
Alliance Variant		 Chr2:164793989 Mmp9 Intron
Rr569778 1361 bp proximal
 SNP A/G A G G A G
SNP ID
(GRCm39)		 Map Position
(GRCm39)		 Gene & Category Variation
Type		 Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
129X1/SvJ
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BLKS/J
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
DDK/Pas
FVB/NJ
I/LnJ
JF1/Ms
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MAI/Pas
MA/MyJ
MOLF/EiJ
MSM/Ms
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PERA/EiJ
PL/J
PWD/Ph
PWD/PhJ
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SEG/Pas
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs228106038
MGI SNP Detail
Alliance Variant		 Chr2:164793999 Mmp9 Intron
Rr569778 1351 bp proximal
 SNP C/G C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C G C C C C
rs28262056
MGI SNP Detail
Alliance Variant		 Chr2:164794031 Mmp9 Intron
Rr569778 1319 bp proximal
 SNP C/T C C T C T T T T T T C C C T T C T C
rs28262055
MGI SNP Detail
Alliance Variant		 Chr2:164794044 Mmp9 Intron
Rr569778 1306 bp proximal
 SNP A/C C C A C A A A A A A C C C C A C
rs28262054
MGI SNP Detail
Alliance Variant		 Chr2:164794150 Mmp9 Intron
Rr569778 1200 bp proximal
 SNP C/T C C C C C C T C C C C C C C C
rs250096408
MGI SNP Detail
Alliance Variant		 Chr2:164794226 Mmp9 Intron
Rr569778 1124 bp proximal
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs212503306
MGI SNP Detail
Alliance Variant		 Chr2:164794233 Mmp9 Intron
Rr569778 1117 bp proximal
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs240475887
MGI SNP Detail
Alliance Variant		 Chr2:164794347 Mmp9 Coding-Synonymous
Rr569778 1003 bp proximal
Tssr21693 within coordinates of
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs259548783
MGI SNP Detail
Alliance Variant		 Chr2:164794476 Mmp9 Coding-Synonymous
Rr569778 874 bp proximal
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C T C C C C T T C C C C C C C C C C C T C C C C C C C C C C C C
rs216181467
MGI SNP Detail
Alliance Variant		 Chr2:164794506 Mmp9 Coding-Synonymous
Rr569778 844 bp proximal
 SNP C/G G G G G G G G G G G G G G G G G G G G C G G C G G G G C C G G G G G G G G G G G C G G G G G G G C G G G G
rs579052194
MGI SNP Detail
Alliance Variant		 Chr2:164794524 Mmp9 Coding-Synonymous
Rr569778 826 bp proximal
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs28262053
MGI SNP Detail
Alliance Variant		 Chr2:164794549 Mmp9 Coding-NonSynonymous
Rr569777 within coordinates of
Rr569778 801 bp proximal
 SNP C/G C C G C G G C G G G C C G G C
rs28262052
MGI SNP Detail
Alliance Variant		 Chr2:164794728 Mmp9 Intron
Rr569778 622 bp proximal
 SNP C/T C C C C C C C C C C C C C C T
rs28262051
MGI SNP Detail
Alliance Variant		 Chr2:164794747 Mmp9 Intron
Rr569778 603 bp proximal
 SNP C/G C C C C C C G C C C C C C C C
rs237609838
MGI SNP Detail
Alliance Variant		 Chr2:164794799 Mmp9 Coding-Synonymous
Rr569778 551 bp proximal
 SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs28262050
MGI SNP Detail
Alliance Variant		 Chr2:164794871 Mmp9 Coding-Synonymous
Rr569778 479 bp proximal
 SNP A/C C C C C C C A C C C C C C C C
rs219868314
MGI SNP Detail
Alliance Variant		 Chr2:164794928 Mmp9 Intron
Rr569778 422 bp proximal
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs248127513
MGI SNP Detail
Alliance Variant		 Chr2:164794929 Mmp9 Intron
Rr569778 421 bp proximal
 SNP C/G C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C G C C C C
rs28262049
MGI SNP Detail
Alliance Variant		 Chr2:164795001 Mmp9 Intron
Rr569778 349 bp proximal
 SNP A/C C C C C C C A C C C C C C C C
rs221650627
MGI SNP Detail
Alliance Variant		 Chr2:164795040 Cpgi12681 within coordinates of
Mmp9 Intron
Rr569778 310 bp proximal
 SNP G/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T G T T T T
rs582484017
MGI SNP Detail
Alliance Variant		 Chr2:164795048 Cpgi12681 within coordinates of
Mmp9 Intron
Rr569778 302 bp proximal
 SNP C/G C C C C C C C C C C C C C C C C C C C G C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C
rs586081755
MGI SNP Detail
Alliance Variant		 Chr2:164795059 Cpgi12681 within coordinates of
Mmp9 Intron
Rr569778 291 bp proximal
 SNP A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A
rs240517235
MGI SNP Detail
Alliance Variant		 Chr2:164795083 Cpgi12681 within coordinates of
Mmp9 Intron
Rr569778 267 bp proximal
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs28262048
MGI SNP Detail
Alliance Variant		 Chr2:164795156 Cpgi12681 within coordinates of
Mmp9 Intron
Rr569778 194 bp proximal
 SNP A/C A A A A A A C A A A A A A A A
rs28262047
MGI SNP Detail
Alliance Variant		 Chr2:164795269 Cpgi12681 within coordinates of
Mmp9 Coding-Synonymous
Rr569778 81 bp proximal
 SNP C/T C C C C C C T C C C C C C C C
rs13475086
MGI SNP Detail
Alliance Variant		 Chr2:164795295 Cpgi12681 within coordinates of
Mmp9 Coding-NonSynonymous
Rr569778 55 bp proximal
 SNP C/T C C C C C C C C C C C T C C C C C
SNP ID
(GRCm39)		 Map Position
(GRCm39)		 Gene & Category Variation
Type		 Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
129X1/SvJ
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BLKS/J
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
DDK/Pas
FVB/NJ
I/LnJ
JF1/Ms
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MAI/Pas
MA/MyJ
MOLF/EiJ
MSM/Ms
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PERA/EiJ
PL/J
PWD/Ph
PWD/PhJ
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SEG/Pas
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs261552521
MGI SNP Detail
Alliance Variant		 Chr2:164795296 Cpgi12681 within coordinates of
Mmp9 Coding-Synonymous
Rr569778 54 bp proximal
 SNP C/T C C C C C C C C C C C C C C C C C C C T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C
rs235225876
MGI SNP Detail
Alliance Variant		 Chr2:164795325 Cpgi12681 within coordinates of
Mmp9 Coding-NonSynonymous
Rr569778 25 bp proximal
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs254038513
MGI SNP Detail
Alliance Variant		 Chr2:164795326 Cpgi12681 within coordinates of
Mmp9 Coding-Synonymous
Rr569778 24 bp proximal
 SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs6185704
MGI SNP Detail
Alliance Variant		 Chr2:164795445 Cpgi12681 within coordinates of
Mmp9 Coding-Synonymous
Rr569778 74 bp distal
 SNP C/T C C T C T T C T C C C C C T C T C T T T T T C T T C C T T C T T T C T T T T T T T T C T T T T C T
rs6186671
MGI SNP Detail
Alliance Variant		 Chr2:164795580 Cpgi12681 within coordinates of
Mmp9 Intron
Rr569778 209 bp distal
 SNP A/G G G A G A A A G A A A A A G G A A A A G
rs244909139
MGI SNP Detail
Alliance Variant		 Chr2:164795651 Mmp9 Intron
Rr569778 280 bp distal
 SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs6187226
MGI SNP Detail
Alliance Variant		 Chr2:164795659 Mmp9 Intron
Rr569778 288 bp distal
 SNP G/T T T G T G G G T G G G G G T T G G G G T
rs235783034
MGI SNP Detail
Alliance Variant		 Chr2:164795673 Mmp9 Intron
Rr569778 302 bp distal
 SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs261324296
MGI SNP Detail
Alliance Variant		 Chr2:164795680 Mmp9 Intron
Rr569778 309 bp distal
 SNP G/T G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G T G G G G
rs219840089
MGI SNP Detail
Alliance Variant		 Chr2:164795716 Mmp9 Intron
Rr569778 345 bp distal
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs242802985
MGI SNP Detail
Alliance Variant		 Chr2:164795717 Mmp9 Intron
Rr569778 346 bp distal
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs254109875
MGI SNP Detail
Alliance Variant		 Chr2:164795726 Mmp9 Intron
Rr569778 355 bp distal
 SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs221719885
MGI SNP Detail
Alliance Variant		 Chr2:164795729 Mmp9 Intron
Rr569778 358 bp distal
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs6200053
MGI SNP Detail
Alliance Variant		 Chr2:164795849 Mmp9 Intron
Rr569778 478 bp distal
 SNP A/G G G A G A A A G A A A A G A A A G
rs6200058
MGI SNP Detail
Alliance Variant		 Chr2:164795855 Mmp9 Intron
Rr569778 484 bp distal
 SNP G/T G T G T T
rs580344913
MGI SNP Detail
Alliance Variant		 Chr2:164795880 Mmp9 Intron
Rr569778 509 bp distal
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs29919640
MGI SNP Detail
Alliance Variant		 Chr2:164795903 Mmp9 Intron
Rr569778 532 bp distal
 SNP A/G G A G A G A
rs242155361
MGI SNP Detail
Alliance Variant		 Chr2:164795956 Mmp9 Intron
Rr569778 585 bp distal
 SNP G/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T G T T T T
rs264671502
MGI SNP Detail
Alliance Variant		 Chr2:164796026 Mmp9 Intron
Rr569778 655 bp distal
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs45667747
MGI SNP Detail
Alliance Variant		 Chr2:164796058 Mmp9 Intron
Rr569778 687 bp distal
 SNP A/G A G A G
rs48875884
MGI SNP Detail
Alliance Variant		 Chr2:164796059 Mmp9 Intron
Rr569778 688 bp distal
 SNP G/T G T G T
rs29555477
MGI SNP Detail
Alliance Variant		 Chr2:164796077 Mmp9 Intron
Rr569778 706 bp distal
 SNP C/G G C G C
rs226967967
MGI SNP Detail
Alliance Variant		 Chr2:164796091 Mmp9 Intron
Rr569778 720 bp distal
 SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs28262046
MGI SNP Detail
Alliance Variant		 Chr2:164796099 Mmp9 Intron
Rr569778 728 bp distal
 SNP A/G G G A G A A A G A A G G A A G
rs213907590
MGI SNP Detail
Alliance Variant		 Chr2:164796110 Mmp9 Intron
Rr569778 739 bp distal
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
SNP ID
(GRCm39)		 Map Position
(GRCm39)		 Gene & Category Variation
Type		 Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
129X1/SvJ
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BLKS/J
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
DDK/Pas
FVB/NJ
I/LnJ
JF1/Ms
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MAI/Pas
MA/MyJ
MOLF/EiJ
MSM/Ms
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PERA/EiJ
PL/J
PWD/Ph
PWD/PhJ
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SEG/Pas
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs229680733
MGI SNP Detail
Alliance Variant		 Chr2:164796123 Mmp9 Intron
Rr569778 752 bp distal
 SNP G/T G G G G G G G G G G G G G G G G G G G G G G T G G G G T T G G G G G G G G G G G T G G G G G G G G G G G G
rs249426710
MGI SNP Detail
Alliance Variant		 Chr2:164796130 Mmp9 Intron
Rr569778 759 bp distal
 SNP A/C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C A C C C C
rs33598886
MGI SNP Detail
Alliance Variant		 Chr2:164796143 Mmp9 Intron
Rr569778 772 bp distal
 SNP A/G G A G A G A
rs239955093
MGI SNP Detail
Alliance Variant		 Chr2:164796144 Mmp9 Intron
Rr569778 773 bp distal
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs254024096
MGI SNP Detail
Alliance Variant		 Chr2:164796163 Mmp9 Intron
Rr569778 792 bp distal
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs215731395
MGI SNP Detail
Alliance Variant		 Chr2:164796174 Mmp9 Intron
Rr569778 803 bp distal
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs233591710
MGI SNP Detail
Alliance Variant		 Chr2:164796181 Mmp9 Intron
Rr569778 810 bp distal
 SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs251976195
MGI SNP Detail
Alliance Variant		 Chr2:164796202 Mmp9 Intron
Rr569778 831 bp distal
 SNP G/T G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G T G G G G
rs222394522
MGI SNP Detail
Alliance Variant		 Chr2:164796248 Mmp9 Intron
Rr569778 877 bp distal
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs33533861
MGI SNP Detail
Alliance Variant		 Chr2:164796249 Mmp9 Intron
Rr569778 878 bp distal
 SNP C/T T C T C T C
rs255441383
MGI SNP Detail
Alliance Variant		 Chr2:164796260 Mmp9 Intron
Rr569778 889 bp distal
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs227282125
MGI SNP Detail
Alliance Variant		 Chr2:164796300 Mmp9 Intron
Rr569778 929 bp distal
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs240932048
MGI SNP Detail
Alliance Variant		 Chr2:164796305 Mmp9 Intron
Rr569778 934 bp distal
 SNP G/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T G T T T T
rs258165444
MGI SNP Detail
Alliance Variant		 Chr2:164796353 Mmp9 Intron
Mmp9 Noncoding-Transcript-Variant
Mmp9 Splice-Site
Rr569778 982 bp distal
 SNP G/T G G G G G G G G G G G G G G G G G G G T G G G G G G G G G G G G G G G G G G G G G G G G G G G G T G G G G
rs227038340
MGI SNP Detail
Alliance Variant		 Chr2:164796364 Mmp9 Intron
Mmp9 Noncoding-Transcript-Variant
Rr569778 993 bp distal
 SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs238498591
MGI SNP Detail
Alliance Variant		 Chr2:164796390 Mmp9 Intron
Mmp9 Noncoding-Transcript-Variant
Rr569778 1019 bp distal
 SNP C/G G G G G G G G G G G G G G G G G G G G C G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G
rs265147113
MGI SNP Detail
Alliance Variant		 Chr2:164796410 Mmp9 Intron
Mmp9 Noncoding-Transcript-Variant
Rr569778 1039 bp distal
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs229105646
MGI SNP Detail
Alliance Variant		 Chr2:164796448 Mmp9 Intron
Mmp9 Noncoding-Transcript-Variant
Rr569778 1077 bp distal
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G A G G G G A A G G G G G G G G G G G A G G G G G G G G G G G G
rs253433974
MGI SNP Detail
Alliance Variant		 Chr2:164796483 Mmp9 Intron
Mmp9 Noncoding-Transcript-Variant
Rr569778 1112 bp distal
 SNP G/T G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G T G G G G
rs219801615
MGI SNP Detail
Alliance Variant		 Chr2:164796487 Mmp9 Intron
Mmp9 Noncoding-Transcript-Variant
Rr569778 1116 bp distal
 SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs234464620
MGI SNP Detail
Alliance Variant		 Chr2:164796528 Mmp9 Intron
Mmp9 Noncoding-Transcript-Variant
Rr569778 1157 bp distal
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs247735668
MGI SNP Detail
Alliance Variant		 Chr2:164796540 Mmp9 Intron
Mmp9 Noncoding-Transcript-Variant
Rr569778 1169 bp distal
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs215603168
MGI SNP Detail
Alliance Variant		 Chr2:164796600 Mmp9 Intron
Mmp9 Noncoding-Transcript-Variant
Rr569778 1229 bp distal
 SNP A/G A A A A A A A A A A A A A A A A A A A A A A G A A A A G G A A A A A A A A A A A G A A A A A A A A A A A A
rs233609447
MGI SNP Detail
Alliance Variant		 Chr2:164796610 Mmp9 Intron
Mmp9 Noncoding-Transcript-Variant
Rr569778 1239 bp distal
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs28262045
MGI SNP Detail
Alliance Variant		 Chr2:164796640 Mmp9 Intron
Mmp9 Noncoding-Transcript-Variant
Rr569778 1269 bp distal
 SNP A/T A A A A A A A A A T A A A T A
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Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
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Send questions and comments to User Support. 		last database update
03/25/2025
MGI 6.24 		The Jackson Laboratory
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