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Mouse SNP Summary
Symbol
Name
ID
Rr571014
regulatory region 571014
MGI:8033146

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SNP ID
(GRCm39)
Map Position
(GRCm39)
Gene & Category Variation
Type
Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PL/J
PWD/PhJ
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs217739292
MGI SNP Detail
Alliance Variant
Chr2:168403881 Nfatc2 Intron
Nfatc2 Noncoding-Transcript-Variant
Rr571014 1944 bp proximal
SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs250967203
MGI SNP Detail
Alliance Variant
Chr2:168403885 Nfatc2 Intron
Nfatc2 Noncoding-Transcript-Variant
Rr571014 1940 bp proximal
SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs263936309
MGI SNP Detail
Alliance Variant
Chr2:168403895 Nfatc2 Intron
Nfatc2 Noncoding-Transcript-Variant
Rr571014 1930 bp proximal
SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G G G G G G G G
rs232949992
MGI SNP Detail
Alliance Variant
Chr2:168403905 Nfatc2 Intron
Nfatc2 Noncoding-Transcript-Variant
Rr571014 1920 bp proximal
SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs245190952
MGI SNP Detail
Alliance Variant
Chr2:168403935 Nfatc2 Intron
Nfatc2 Noncoding-Transcript-Variant
Rr571014 1890 bp proximal
SNP A/C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C A C C C C
rs226615851
MGI SNP Detail
Alliance Variant
Chr2:168403959 Nfatc2 Intron
Nfatc2 Noncoding-Transcript-Variant
Rr571014 1866 bp proximal
SNP A/C A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A C A A A A
rs245033582
MGI SNP Detail
Alliance Variant
Chr2:168403980 Nfatc2 Intron
Nfatc2 Noncoding-Transcript-Variant
Rr571014 1845 bp proximal
SNP C/T C C C C C C C C C C C C C C C C C C C T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C
rs212967040
MGI SNP Detail
Alliance Variant
Chr2:168404087 Nfatc2 Intron
Nfatc2 Noncoding-Transcript-Variant
Rr571014 1738 bp proximal
SNP A/T T T T T T T T T T T T T T T T T T T T A T T A T T T T A T T T T T T T T T T T T A T T T T T T A T T T
rs227803431
MGI SNP Detail
Alliance Variant
Chr2:168404104 Nfatc2 Intron
Nfatc2 Noncoding-Transcript-Variant
Rr571014 1721 bp proximal
SNP A/G G G G G G G G G G G G G G G G G G G G A G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G
rs260384467
MGI SNP Detail
Alliance Variant
Chr2:168404118 Nfatc2 Intron
Nfatc2 Noncoding-Transcript-Variant
Rr571014 1707 bp proximal
SNP A/C A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A C A A A A
rs218407767
MGI SNP Detail
Alliance Variant
Chr2:168404219 Nfatc2 Intron
Nfatc2 Noncoding-Transcript-Variant
Rr571014 1606 bp proximal
SNP A/T A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A T A A A A
rs241501716
MGI SNP Detail
Alliance Variant
Chr2:168404262 Nfatc2 Intron
Nfatc2 Noncoding-Transcript-Variant
Rr571014 1563 bp proximal
SNP A/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T A T T T T
rs27289063
MGI SNP Detail
Alliance Variant
Chr2:168404330 Nfatc2 Intron
Nfatc2 Noncoding-Transcript-Variant
Rr571014 1495 bp proximal
SNP C/T C C C C C C T C C C C C C C C
rs27289062
MGI SNP Detail
Alliance Variant
Chr2:168404338 Nfatc2 Intron
Nfatc2 Noncoding-Transcript-Variant
Rr571014 1487 bp proximal
SNP C/T C C C C C C C C C C C C C T C
rs27289061
MGI SNP Detail
Alliance Variant
Chr2:168404346 Nfatc2 Intron
Nfatc2 Noncoding-Transcript-Variant
Rr571014 1479 bp proximal
SNP A/G A A A A A A G A A A A A A A A
rs214812201
MGI SNP Detail
Alliance Variant
Chr2:168404383 Nfatc2 Intron
Nfatc2 Noncoding-Transcript-Variant
Rr571014 1442 bp proximal
SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs231767691
MGI SNP Detail
Alliance Variant
Chr2:168404485 Nfatc2 Intron
Nfatc2 Noncoding-Transcript-Variant
Rr571014 1340 bp proximal
SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs581549955
MGI SNP Detail
Alliance Variant
Chr2:168404486 Nfatc2 Intron
Nfatc2 Noncoding-Transcript-Variant
Rr571014 1339 bp proximal
SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs248601749
MGI SNP Detail
Alliance Variant
Chr2:168404567 Nfatc2 Intron
Nfatc2 Noncoding-Transcript-Variant
Rr571014 1258 bp proximal
SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs217681621
MGI SNP Detail
Alliance Variant
Chr2:168404623 Nfatc2 Intron
Nfatc2 Noncoding-Transcript-Variant
Rr571014 1202 bp proximal
SNP A/G G G G G G G G G G G G G G G G G G G G A G G A G G G G A G G G G G G G G G G G G G G G G G G G G G G G G G
rs240042711
MGI SNP Detail
Alliance Variant
Chr2:168404630 Nfatc2 Intron
Nfatc2 Noncoding-Transcript-Variant
Rr571014 1195 bp proximal
SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs27289060
MGI SNP Detail
Alliance Variant
Chr2:168404680 Nfatc2 Intron
Nfatc2 Noncoding-Transcript-Variant
Rr571014 1145 bp proximal
SNP C/T C C C C C C T C C C C C C C C
rs224852431
MGI SNP Detail
Alliance Variant
Chr2:168404735 Nfatc2 Intron
Nfatc2 Noncoding-Transcript-Variant
Rr571014 1090 bp proximal
SNP G/T G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G T G G G G
rs247685736
MGI SNP Detail
Alliance Variant
Chr2:168404775 Nfatc2 Intron
Nfatc2 Noncoding-Transcript-Variant
Rr571014 1050 bp proximal
SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs27289059
MGI SNP Detail
Alliance Variant
Chr2:168404801 Nfatc2 Intron
Nfatc2 Noncoding-Transcript-Variant
Rr571014 1024 bp proximal
SNP C/T T T T T T T C T T T T T T C T
SNP ID
(GRCm39)
Map Position
(GRCm39)
Gene & Category Variation
Type
Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PL/J
PWD/PhJ
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs219516976
MGI SNP Detail
Alliance Variant
Chr2:168404910 Nfatc2 Intron
Nfatc2 Noncoding-Transcript-Variant
Rr571014 915 bp proximal
SNP A/T A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A T A A A A
rs238037609
MGI SNP Detail
Alliance Variant
Chr2:168404949 Nfatc2 Intron
Nfatc2 Noncoding-Transcript-Variant
Rr571014 876 bp proximal
SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs256812651
MGI SNP Detail
Alliance Variant
Chr2:168404976 Nfatc2 Intron
Nfatc2 Noncoding-Transcript-Variant
Rr571014 849 bp proximal
SNP A/G G G G G G G G G G G G G G G G G G G G A G G A G G G G A G G G G G G G G G G G G G G G G G G G G G G G G G
rs228357726
MGI SNP Detail
Alliance Variant
Chr2:168405000 Nfatc2 Intron
Nfatc2 Noncoding-Transcript-Variant
Rr571014 825 bp proximal
SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C C C C C C C C C C T C C C C C C C C C C C T
rs254867174
MGI SNP Detail
Alliance Variant
Chr2:168405210 Nfatc2 Intron
Nfatc2 Noncoding-Transcript-Variant
Rr571014 615 bp proximal
SNP A/T T T T T T T T T T T T T T T T T T T T T T T A T T T T A T T T T T T T T T T T T T T T T T T T T A T T T T
rs265978036
MGI SNP Detail
Alliance Variant
Chr2:168405224 Nfatc2 Intron
Nfatc2 Noncoding-Transcript-Variant
Rr571014 601 bp proximal
SNP C/T T T T T T T T T T T T T T T T T T T T C T T C T T T T C T T T T T T T T T T T T T T T T T T T T C T T T T
rs232622223
MGI SNP Detail
Alliance Variant
Chr2:168405252 Nfatc2 Intron
Nfatc2 Noncoding-Transcript-Variant
Rr571014 573 bp proximal
SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs245486342
MGI SNP Detail
Alliance Variant
Chr2:168405264 Nfatc2 Intron
Nfatc2 Noncoding-Transcript-Variant
Rr571014 561 bp proximal
SNP A/C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C A C C C C
rs214696875
MGI SNP Detail
Alliance Variant
Chr2:168405267 Nfatc2 Intron
Nfatc2 Noncoding-Transcript-Variant
Rr571014 558 bp proximal
SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs27289058
MGI SNP Detail
Alliance Variant
Chr2:168405303 Nfatc2 Intron
Nfatc2 Noncoding-Transcript-Variant
Rr571014 522 bp proximal
SNP A/G A A A A A A G A A A A A A G A
rs27289057
MGI SNP Detail
Alliance Variant
Chr2:168405352 Nfatc2 Intron
Nfatc2 Noncoding-Transcript-Variant
Rr571014 473 bp proximal
SNP A/G A A A A A A G A A A A A A A A
rs211738552
MGI SNP Detail
Alliance Variant
Chr2:168405393 Nfatc2 Intron
Nfatc2 Noncoding-Transcript-Variant
Rr571014 432 bp proximal
SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs242723166
MGI SNP Detail
Alliance Variant
Chr2:168405433 Nfatc2 Intron
Nfatc2 Noncoding-Transcript-Variant
Rr571014 392 bp proximal
SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs260018705
MGI SNP Detail
Alliance Variant
Chr2:168405442 Nfatc2 Intron
Nfatc2 Noncoding-Transcript-Variant
Rr571014 383 bp proximal
SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs224865549
MGI SNP Detail
Alliance Variant
Chr2:168405450 Nfatc2 Intron
Nfatc2 Noncoding-Transcript-Variant
Rr571014 375 bp proximal
SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs233638838
MGI SNP Detail
Alliance Variant
Chr2:168405492 Nfatc2 Intron
Nfatc2 Noncoding-Transcript-Variant
Rr571014 333 bp proximal
SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs27289056
MGI SNP Detail
Alliance Variant
Chr2:168405535 Nfatc2 Intron
Nfatc2 Noncoding-Transcript-Variant
Rr571014 290 bp proximal
SNP C/T C C C C C C T C C C C C C C
rs219462287
MGI SNP Detail
Alliance Variant
Chr2:168405536 Nfatc2 Intron
Nfatc2 Noncoding-Transcript-Variant
Rr571014 289 bp proximal
SNP C/T T T T T T T T T T T T T T T T T T T T T T T C T T T T C T T T T T T T T T T T T T T T T T T T T C T T T T
rs238027167
MGI SNP Detail
Alliance Variant
Chr2:168405555 Nfatc2 Intron
Nfatc2 Noncoding-Transcript-Variant
Rr571014 270 bp proximal
SNP C/T T T T T T T T T T T T T T T T T T T T T T T C T T T T C T T T T T T T T T T T T T T T T T T T T C T T T T
rs27289055
MGI SNP Detail
Alliance Variant
Chr2:168405576 Nfatc2 Intron
Nfatc2 Noncoding-Transcript-Variant
Rr571014 249 bp proximal
SNP C/G G G G G G G C G G G G G G G G
rs220484311
MGI SNP Detail
Alliance Variant
Chr2:168405617 Nfatc2 Intron
Nfatc2 Noncoding-Transcript-Variant
Rr571014 208 bp proximal
SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs27289054
MGI SNP Detail
Alliance Variant
Chr2:168405627 Nfatc2 Intron
Nfatc2 Noncoding-Transcript-Variant
Rr571014 198 bp proximal
SNP A/T A A A A A A T A A A A A A A
rs27289053
MGI SNP Detail
Alliance Variant
Chr2:168405664 Nfatc2 Intron
Nfatc2 Noncoding-Transcript-Variant
Rr571014 161 bp proximal
SNP C/T C C C C C C T C C C C C C C C
rs233283119
MGI SNP Detail
Alliance Variant
Chr2:168405701 Nfatc2 Intron
Nfatc2 Noncoding-Transcript-Variant
Rr571014 124 bp proximal
SNP C/T T T T T T T T T T T T T T T T T T T T C T T C T T T C C T T T T T T T T T T T T T T T T T T T C T T T T
rs245429750
MGI SNP Detail
Alliance Variant
Chr2:168405708 Nfatc2 Intron
Nfatc2 Noncoding-Transcript-Variant
Rr571014 117 bp proximal
SNP C/T C C C C C C C C C C C C C C C C C C C T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C
SNP ID
(GRCm39)
Map Position
(GRCm39)
Gene & Category Variation
Type
Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PL/J
PWD/PhJ
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs27289052
MGI SNP Detail
Alliance Variant
Chr2:168405741 Nfatc2 Intron
Nfatc2 Noncoding-Transcript-Variant
Rr571014 84 bp proximal
SNP A/G A A A A A A G A A A A A A G A
rs584746869
MGI SNP Detail
Alliance Variant
Chr2:168405761 Nfatc2 Intron
Nfatc2 Noncoding-Transcript-Variant
Rr571014 64 bp proximal
SNP C/T T T T T T T T T T T T T T T T T T T T T T T C T T T T C T T T T T T T T T T T T T T T T T T T T C T T T T
rs27289051
MGI SNP Detail
Alliance Variant
Chr2:168405797 Nfatc2 Intron
Nfatc2 Noncoding-Transcript-Variant
Rr571014 28 bp proximal
SNP C/T T T T T T T C T T T T T T T
rs27289050
MGI SNP Detail
Alliance Variant
Chr2:168405810 Nfatc2 Intron
Nfatc2 Noncoding-Transcript-Variant
Rr571014 15 bp proximal
SNP A/G A A A A A A G A A A A A A A
rs212765271
MGI SNP Detail
Alliance Variant
Chr2:168405839 Nfatc2 Intron
Nfatc2 Noncoding-Transcript-Variant
Rr571014 within coordinates of
SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs233546040
MGI SNP Detail
Alliance Variant
Chr2:168405889 Nfatc2 Intron
Nfatc2 Noncoding-Transcript-Variant
Rr571014 43 bp distal
SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs27289049
MGI SNP Detail
Alliance Variant
Chr2:168405938 Nfatc2 Intron
Nfatc2 Noncoding-Transcript-Variant
Rr571014 92 bp distal
SNP A/G A A A A A A A A A A A A A G A
rs216294902
MGI SNP Detail
Alliance Variant
Chr2:168405987 Nfatc2 Intron
Nfatc2 Noncoding-Transcript-Variant
Rr571014 141 bp distal
SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs27289048
MGI SNP Detail
Alliance Variant
Chr2:168406034 Nfatc2 Intron
Nfatc2 Noncoding-Transcript-Variant
Rr571014 188 bp distal
SNP C/T C C C C C C C C C C C C C T C
rs233548846
MGI SNP Detail
Alliance Variant
Chr2:168406088 Nfatc2 Intron
Nfatc2 Noncoding-Transcript-Variant
Rr571014 242 bp distal
SNP A/G A A A A A A A A A A A A A A A A A A A G A A G A A A A G A A A A A A A A A A A A A A A A A A A A G A A A A
rs251834068
MGI SNP Detail
Alliance Variant
Chr2:168406092 Nfatc2 Intron
Nfatc2 Noncoding-Transcript-Variant
Rr571014 246 bp distal
SNP C/T C C C C C C C C C C C C C C C C C C C T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C
rs213529680
MGI SNP Detail
Alliance Variant
Chr2:168406117 Nfatc2 Intron
Nfatc2 Noncoding-Transcript-Variant
Rr571014 271 bp distal
SNP A/C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C A C C C C
rs230507832
MGI SNP Detail
Alliance Variant
Chr2:168406177 Nfatc2 Intron
Nfatc2 Noncoding-Transcript-Variant
Rr571014 331 bp distal
SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs255455999
MGI SNP Detail
Alliance Variant
Chr2:168406184 Nfatc2 Intron
Nfatc2 Noncoding-Transcript-Variant
Rr571014 338 bp distal
SNP A/G A A A A A A A A A A A A A A A A A A A G A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs27289047
MGI SNP Detail
Alliance Variant
Chr2:168406196 Nfatc2 Intron
Nfatc2 Noncoding-Transcript-Variant
Rr571014 350 bp distal
SNP C/T C C C C C C T C C C C C C T C
rs247446848
MGI SNP Detail
Alliance Variant
Chr2:168406246 Nfatc2 Intron
Nfatc2 Noncoding-Transcript-Variant
Rr571014 400 bp distal
Rr571015 within coordinates of
SNP A/G G G G G G G G G G G G G G G G G G G G A G G A G G G G A G G G G G G G G G G G G G G G G G G G G A G G G G
rs263763532
MGI SNP Detail
Alliance Variant
Chr2:168406248 Nfatc2 Intron
Nfatc2 Noncoding-Transcript-Variant
Rr571014 402 bp distal
Rr571015 within coordinates of
SNP G/T G G G G G G G G G G G G G G G G G G G T G G T G G G G T G G G G G G G G G G G G G G G G G G G G T G G G G
rs221493451
MGI SNP Detail
Alliance Variant
Chr2:168406304 Nfatc2 Intron
Nfatc2 Noncoding-Transcript-Variant
Rr571014 458 bp distal
SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs27289046
MGI SNP Detail
Alliance Variant
Chr2:168406307 Nfatc2 Intron
Nfatc2 Noncoding-Transcript-Variant
Rr571014 461 bp distal
SNP A/G A A A A A A G A A A A A A G A
rs256574052
MGI SNP Detail
Alliance Variant
Chr2:168406328 Nfatc2 Intron
Nfatc2 Noncoding-Transcript-Variant
Rr571014 482 bp distal
SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs27289045
MGI SNP Detail
Alliance Variant
Chr2:168406424 Nfatc2 Intron
Nfatc2 Noncoding-Transcript-Variant
Rr571014 578 bp distal
SNP A/G G G G G G G A G G G G G G G G
rs27289044
MGI SNP Detail
Alliance Variant
Chr2:168406505 Nfatc2 Intron
Nfatc2 Noncoding-Transcript-Variant
Rr571014 659 bp distal
SNP G/T T T T T T T G T T T T T T G T
rs261689503
MGI SNP Detail
Alliance Variant
Chr2:168406507 Nfatc2 Intron
Nfatc2 Noncoding-Transcript-Variant
Rr571014 661 bp distal
SNP A/G A A A A A A A A A A A A A A A A A A A G A A G A A A A G A A A A A A A A A A A A A A A A A A A A G A A A A
rs235671437
MGI SNP Detail
Alliance Variant
Chr2:168406555 Nfatc2 Intron
Nfatc2 Noncoding-Transcript-Variant
Rr571014 709 bp distal
SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs27289043
MGI SNP Detail
Alliance Variant
Chr2:168406567 Nfatc2 Intron
Nfatc2 Noncoding-Transcript-Variant
Rr571014 721 bp distal
SNP A/G A A A A A A G A A A A A A A A
SNP ID
(GRCm39)
Map Position
(GRCm39)
Gene & Category Variation
Type
Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PL/J
PWD/PhJ
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs27289042
MGI SNP Detail
Alliance Variant
Chr2:168406573 Nfatc2 Intron
Nfatc2 Noncoding-Transcript-Variant
Rr571014 727 bp distal
SNP C/T T T T T T T T T T T T T C T
rs227084346
MGI SNP Detail
Alliance Variant
Chr2:168406589 Nfatc2 Intron
Nfatc2 Noncoding-Transcript-Variant
Rr571014 743 bp distal
SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs27289041
MGI SNP Detail
Alliance Variant
Chr2:168406642 Nfatc2 Intron
Nfatc2 Noncoding-Transcript-Variant
Rr571014 796 bp distal
SNP C/G G G G G G G C G G G G G G C G
rs213466542
MGI SNP Detail
Alliance Variant
Chr2:168406650 Nfatc2 Intron
Nfatc2 Noncoding-Transcript-Variant
Rr571014 804 bp distal
SNP A/G G G G G G G G G G G G G G G G G G G G A G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G
rs230408855
MGI SNP Detail
Alliance Variant
Chr2:168406747 Nfatc2 Intron
Nfatc2 Noncoding-Transcript-Variant
Rr571014 901 bp distal
SNP C/T T T T T T T T T T T T T T T T T T T T C T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T
rs27289040
MGI SNP Detail
Alliance Variant
Chr2:168406772 Nfatc2 Intron
Nfatc2 Noncoding-Transcript-Variant
Rr571014 926 bp distal
SNP C/T T T T T T T C T T T T T T C T
rs219009562
MGI SNP Detail
Alliance Variant
Chr2:168406807 Nfatc2 Intron
Nfatc2 Noncoding-Transcript-Variant
Rr571014 961 bp distal
SNP C/T T T T T T T T T T T T T T T T T T T T C T T C T T T T C T T T T T T T T T T T T T T T T T T T T C T T T T
rs242003897
MGI SNP Detail
Alliance Variant
Chr2:168406823 Nfatc2 Intron
Nfatc2 Noncoding-Transcript-Variant
Rr571014 977 bp distal
SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs259485440
MGI SNP Detail
Alliance Variant
Chr2:168406881 Nfatc2 Intron
Nfatc2 Noncoding-Transcript-Variant
Rr571014 1035 bp distal
SNP A/G A A A A A A A A A A A A A A A A A A A G A A G A A A A G A A A A A A A A A A A A A A A A A A A A G A A A A
rs221485976
MGI SNP Detail
Alliance Variant
Chr2:168406887 Nfatc2 Intron
Nfatc2 Noncoding-Transcript-Variant
Rr571014 1041 bp distal
SNP C/G G G G G G G G G G G G G G G G G G G G C G G C G G G G C G G G G G G G G G G G G G G G G G G G G G G G G G
rs27289039
MGI SNP Detail
Alliance Variant
Chr2:168406996 Nfatc2 Intron
Nfatc2 Noncoding-Transcript-Variant
Rr571014 1150 bp distal
SNP A/G A A A A A A G A A A A A A A A
rs27289038
MGI SNP Detail
Alliance Variant
Chr2:168407080 Nfatc2 Intron
Nfatc2 Noncoding-Transcript-Variant
Rr571014 1234 bp distal
SNP C/T C C C C C C T C C C C C C C C
rs219492546
MGI SNP Detail
Alliance Variant
Chr2:168407099 Nfatc2 Intron
Nfatc2 Noncoding-Transcript-Variant
Rr571014 1253 bp distal
SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs242391468
MGI SNP Detail
Alliance Variant
Chr2:168407116 Nfatc2 Intron
Nfatc2 Noncoding-Transcript-Variant
Rr571014 1270 bp distal
SNP C/T T T T T T T T T T T T T T T T T T T T T T T C T T T T C T T T T T T T T T T T T T T T T T T T T C T T T T
rs27289037
MGI SNP Detail
Alliance Variant
Chr2:168407131 Nfatc2 Intron
Nfatc2 Noncoding-Transcript-Variant
Rr571014 1285 bp distal
SNP A/G G G G G G G A G G G G G G A G
rs27289036
MGI SNP Detail
Alliance Variant
Chr2:168407147 Nfatc2 Intron
Nfatc2 Noncoding-Transcript-Variant
Rr571014 1301 bp distal
SNP C/T C C C C C C T C C C C C C C C
rs250640923
MGI SNP Detail
Alliance Variant
Chr2:168407149 Nfatc2 Intron
Nfatc2 Noncoding-Transcript-Variant
Rr571014 1303 bp distal
SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs263833294
MGI SNP Detail
Alliance Variant
Chr2:168407170 Nfatc2 Intron
Nfatc2 Noncoding-Transcript-Variant
Rr571014 1324 bp distal
SNP C/T C C C C C C C C C C C C C C C C C C C T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C
rs227025588
MGI SNP Detail
Alliance Variant
Chr2:168407407 Nfatc2 Intron
Nfatc2 Noncoding-Transcript-Variant
Rr571014 1561 bp distal
SNP C/T C C C C C C C C C C C C C C C C C C C T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C
rs27289035
MGI SNP Detail
Alliance Variant
Chr2:168407415 Nfatc2 Intron
Nfatc2 Noncoding-Transcript-Variant
Rr571014 1569 bp distal
SNP A/T A A A A A A A A A A A A T A
rs257250171
MGI SNP Detail
Alliance Variant
Chr2:168407509 Gm74616 within coordinates of
Nfatc2 Intron
Nfatc2 Noncoding-Transcript-Variant
Rr571014 1663 bp distal
SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs27289034
MGI SNP Detail
Alliance Variant
Chr2:168407523 Gm74616 within coordinates of
Nfatc2 Intron
Nfatc2 Noncoding-Transcript-Variant
Rr571014 1677 bp distal
Rr571016 within coordinates of
SNP C/T T T T T T T T T T T T T T C T
rs27289033
MGI SNP Detail
Alliance Variant
Chr2:168407539 Gm74616 within coordinates of
Nfatc2 Intron
Nfatc2 Noncoding-Transcript-Variant
Rr571014 1693 bp distal
Rr571016 within coordinates of
SNP C/T C C C C C C C C C C C C C T C
rs27289032
MGI SNP Detail
Alliance Variant
Chr2:168407738 Gm74616 within coordinates of
Nfatc2 Intron
Nfatc2 Noncoding-Transcript-Variant
Rr571014 1892 bp distal
Rr571016 within coordinates of
SNP A/G G G G G G G A G G G G G G G G
rs218929480
MGI SNP Detail
Alliance Variant
Chr2:168407837 Gm74616 within coordinates of
Nfatc2 Intron
Nfatc2 Noncoding-Transcript-Variant
Rr571014 1991 bp distal
Rr571016 within coordinates of
SNP A/C C C C C C C C C C C C C C C C C C C C A C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C
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Showing SNP(s) 1 - 100 of 100

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
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last database update
03/18/2025
MGI 6.24
The Jackson Laboratory

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