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Mouse SNP Summary
Symbol
Name
ID 		Rr571027
regulatory region 571027
MGI:8033159

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SNP ID
(GRCm39)		 Map Position
(GRCm39)		 Gene & Category Variation
Type		 Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
129X1/SvJ
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
MSM/Ms
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PL/J
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs253111841
MGI SNP Detail
Alliance Variant		 Chr2:168430156 Nfatc2 Intron
Nfatc2 Noncoding-Transcript-Variant
Rr571027 1945 bp proximal
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C T C C C C C C C C C C C C C C C C C T C C C C C C C C C C C C
rs219662122
MGI SNP Detail
Alliance Variant		 Chr2:168430158 Nfatc2 Intron
Nfatc2 Noncoding-Transcript-Variant
Rr571027 1943 bp proximal
 SNP A/G G G G G G G G G G G G G G G G G G G G A G G G G G G G A G G G G G G G G G G G G G G G G G G G G A G G G G
rs234456815
MGI SNP Detail
Alliance Variant		 Chr2:168430191 Nfatc2 Intron
Nfatc2 Noncoding-Transcript-Variant
Rr571027 1910 bp proximal
 SNP A/C C C C C C C C C C C C C C C C C C C C C C C A C C C C C C C C C C C C C C C C C A C C C C C C C A C C C C
rs253570531
MGI SNP Detail
Alliance Variant		 Chr2:168430241 Nfatc2 Intron
Nfatc2 Noncoding-Transcript-Variant
Rr571027 1860 bp proximal
 SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs215752378
MGI SNP Detail
Alliance Variant		 Chr2:168430261 Nfatc2 Intron
Nfatc2 Noncoding-Transcript-Variant
Rr571027 1840 bp proximal
 SNP A/G G G G G G G G G G G G G G G G G G G G A G G G G G G G A G G G G G G G G G G G G G G G G G G G G G G G G G
rs231802924
MGI SNP Detail
Alliance Variant		 Chr2:168430290 Nfatc2 Intron
Nfatc2 Noncoding-Transcript-Variant
Rr571027 1811 bp proximal
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs249378664
MGI SNP Detail
Alliance Variant		 Chr2:168430311 Nfatc2 Intron
Nfatc2 Noncoding-Transcript-Variant
Rr571027 1790 bp proximal
 SNP C/G G G G G G G G G G G G G G G G G G G G G G G C G G G G G G G G G G G G G G G G G C G G G G G G G G G G G G
rs212635583
MGI SNP Detail
Alliance Variant		 Chr2:168430342 Nfatc2 Intron
Nfatc2 Noncoding-Transcript-Variant
Rr571027 1759 bp proximal
 SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs578948748
MGI SNP Detail
Alliance Variant		 Chr2:168430380 Nfatc2 Intron
Nfatc2 Noncoding-Transcript-Variant
Rr571027 1721 bp proximal
 SNP C/T T T T T T T T T T T T T T T T T T T T T T T C T T T T T T T T T T T T T T T T T C T T T T T T T T T T T T
rs229761611
MGI SNP Detail
Alliance Variant		 Chr2:168430495 Nfatc2 Intron
Nfatc2 Noncoding-Transcript-Variant
Rr571026 within coordinates of
Rr571027 1606 bp proximal
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G G G G G G G G G
rs264138120
MGI SNP Detail
Alliance Variant		 Chr2:168430506 Nfatc2 Intron
Nfatc2 Noncoding-Transcript-Variant
Rr571026 within coordinates of
Rr571027 1595 bp proximal
 SNP G/T G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G T G G G G
rs225681049
MGI SNP Detail
Alliance Variant		 Chr2:168430538 Nfatc2 Intron
Nfatc2 Noncoding-Transcript-Variant
Rr571026 within coordinates of
Rr571027 1563 bp proximal
 SNP A/G G G G G G G G G G G G G G G G G G G G A G G G G G G G A G G G G G G G G G G G G G G G G G G G G G G G G G
rs50767504
MGI SNP Detail
Alliance Variant		 Chr2:168430563 Nfatc2 Intron
Nfatc2 Noncoding-Transcript-Variant
Rr571026 within coordinates of
Rr571027 1538 bp proximal
 SNP T T T T T T
rs258582892
MGI SNP Detail
Alliance Variant		 Chr2:168430664 Nfatc2 Intron
Nfatc2 Noncoding-Transcript-Variant
Rr571026 within coordinates of
Rr571027 1437 bp proximal
 SNP A/T A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A T A A A A
rs220264426
MGI SNP Detail
Alliance Variant		 Chr2:168430809 Nfatc2 Intron
Nfatc2 Noncoding-Transcript-Variant
Rr571026 within coordinates of
Rr571027 1292 bp proximal
 SNP A/G A A A A A A A A A A A A A A A A A A G A A A A A A A G A A A A A A A A A A A A A A A A A A A A A A A A A
rs239764376
MGI SNP Detail
Alliance Variant		 Chr2:168430833 Nfatc2 Intron
Nfatc2 Noncoding-Transcript-Variant
Rr571026 within coordinates of
Rr571027 1268 bp proximal
 SNP A/C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C A C C C C
rs108335061
MGI SNP Detail
Alliance Variant		 Chr2:168430996 Nfatc2 Intron
Nfatc2 Noncoding-Transcript-Variant
Rr571026 within coordinates of
Rr571027 1105 bp proximal
 SNP G/T G G T
rs108411060
MGI SNP Detail
Alliance Variant		 Chr2:168431004 Nfatc2 Intron
Nfatc2 Noncoding-Transcript-Variant
Rr571026 within coordinates of
Rr571027 1097 bp proximal
 SNP C/T C C C T
rs107924829
MGI SNP Detail
Alliance Variant		 Chr2:168431010 Nfatc2 Intron
Nfatc2 Noncoding-Transcript-Variant
Rr571026 within coordinates of
Rr571027 1091 bp proximal
 SNP C/T T T C
rs107677073
MGI SNP Detail
Alliance Variant		 Chr2:168431034 Nfatc2 Intron
Nfatc2 Noncoding-Transcript-Variant
Rr571026 within coordinates of
Rr571027 1067 bp proximal
 SNP A/T T A
rs108524666
MGI SNP Detail
Alliance Variant		 Chr2:168431041 Nfatc2 Intron
Nfatc2 Noncoding-Transcript-Variant
Rr571026 within coordinates of
Rr571027 1060 bp proximal
 SNP A/G G G G A
rs107676056
MGI SNP Detail
Alliance Variant		 Chr2:168431050 Nfatc2 Intron
Nfatc2 Noncoding-Transcript-Variant
Rr571026 within coordinates of
Rr571027 1051 bp proximal
 SNP A/G G G G A
rs108188354
MGI SNP Detail
Alliance Variant		 Chr2:168431055 Nfatc2 Intron
Nfatc2 Noncoding-Transcript-Variant
Rr571026 within coordinates of
Rr571027 1046 bp proximal
 SNP A/G A A A G
rs108702729
MGI SNP Detail
Alliance Variant		 Chr2:168431082 Nfatc2 Intron
Nfatc2 Noncoding-Transcript-Variant
Rr571026 within coordinates of
Rr571027 1019 bp proximal
 SNP C/T T T T C
rs243484468
MGI SNP Detail
Alliance Variant		 Chr2:168431103 Nfatc2 Intron
Nfatc2 Noncoding-Transcript-Variant
Rr571026 within coordinates of
Rr571027 998 bp proximal
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
SNP ID
(GRCm39)		 Map Position
(GRCm39)		 Gene & Category Variation
Type		 Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
129X1/SvJ
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
MSM/Ms
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PL/J
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs212595740
MGI SNP Detail
Alliance Variant		 Chr2:168431137 Nfatc2 Intron
Nfatc2 Noncoding-Transcript-Variant
Rr571026 within coordinates of
Rr571027 964 bp proximal
 SNP C/T C C C C C C C C C C C C C C C C C C C T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C
rs235958250
MGI SNP Detail
Alliance Variant		 Chr2:168431146 Nfatc2 Intron
Nfatc2 Noncoding-Transcript-Variant
Rr571026 within coordinates of
Rr571027 955 bp proximal
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs108907295
MGI SNP Detail
Alliance Variant		 Chr2:168431246 Nfatc2 Intron
Nfatc2 Noncoding-Transcript-Variant
Rr571026 within coordinates of
Rr571027 855 bp proximal
 SNP C/T T T T C
rs254534962
MGI SNP Detail
Alliance Variant		 Chr2:168431329 Nfatc2 Intron
Nfatc2 Noncoding-Transcript-Variant
Rr571026 within coordinates of
Rr571027 772 bp proximal
 SNP G/T T T T T T T T T T T T T T T T T T T T G T T T T T T T G T T T T T T T T T T T T T T T T T T T T T T T T T
rs217840740
MGI SNP Detail
Alliance Variant		 Chr2:168431376 Nfatc2 Intron
Nfatc2 Noncoding-Transcript-Variant
Rr571026 within coordinates of
Rr571027 725 bp proximal
 SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs238506484
MGI SNP Detail
Alliance Variant		 Chr2:168431438 Nfatc2 Intron
Nfatc2 Noncoding-Transcript-Variant
Rr571026 within coordinates of
Rr571027 663 bp proximal
 SNP C/T T T T T T T T T T T T T T T T T T T T C T T C T T T T C T T T T T T T T T T T T C T T T T T T T C T T T T
rs262844069
MGI SNP Detail
Alliance Variant		 Chr2:168431494 Nfatc2 Intron
Nfatc2 Noncoding-Transcript-Variant
Rr571026 within coordinates of
Rr571027 607 bp proximal
 SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs220228597
MGI SNP Detail
Alliance Variant		 Chr2:168431558 Nfatc2 Intron
Nfatc2 Noncoding-Transcript-Variant
Rr571026 within coordinates of
Rr571027 543 bp proximal
 SNP C/G G G G G G G G G G G G G G G G G G G G G G G C G G G G G G G G G G G G G G G G G C G G G G G G G G G G G G
rs231742351
MGI SNP Detail
Alliance Variant		 Chr2:168431651 Cpgi12775 within coordinates of
Nfatc2 Intron
Nfatc2 Noncoding-Transcript-Variant
Rr571026 within coordinates of
Rr571027 450 bp proximal
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs251266282
MGI SNP Detail
Alliance Variant		 Chr2:168431677 Cpgi12775 within coordinates of
Nfatc2 Intron
Nfatc2 Noncoding-Transcript-Variant
Rr571026 within coordinates of
Rr571027 424 bp proximal
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs218976644
MGI SNP Detail
Alliance Variant		 Chr2:168431712 Cpgi12775 within coordinates of
Nfatc2 Intron
Nfatc2 Noncoding-Transcript-Variant
Rr571026 within coordinates of
Rr571027 389 bp proximal
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C T C C C C C C C C C C C C C C C C C T C C C C C C C C C C C C
rs244225537
MGI SNP Detail
Alliance Variant		 Chr2:168431738 Cpgi12775 within coordinates of
Nfatc2 Intron
Nfatc2 Noncoding-Transcript-Variant
Rr571026 within coordinates of
Rr571027 363 bp proximal
 SNP A/C A A A A A A A A A A A A A A A A A A A A A A C A A A A A A A A A A A A A A A A A C A A A A A A A C A A A A
rs29670417
MGI SNP Detail
Alliance Variant		 Chr2:168431762 Cpgi12775 within coordinates of
Nfatc2 Intron
Nfatc2 Noncoding-Transcript-Variant
Rr571026 within coordinates of
Rr571027 339 bp proximal
 SNP A/G A A G A A
rs226395955
MGI SNP Detail
Alliance Variant		 Chr2:168431903 Cpgi12775 within coordinates of
Nfatc2 Intron
Nfatc2 Noncoding-Transcript-Variant
Rr571026 within coordinates of
Rr571027 198 bp proximal
 SNP A/T A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A T A A A A
rs246701727
MGI SNP Detail
Alliance Variant		 Chr2:168431922 Cpgi12775 within coordinates of
Nfatc2 Intron
Nfatc2 Noncoding-Transcript-Variant
Rr571026 within coordinates of
Rr571027 179 bp proximal
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G A G G G G G G G G G G G G G G G G G A G G G G G G G G G G G G
rs257555786
MGI SNP Detail
Alliance Variant		 Chr2:168431975 Cpgi12775 within coordinates of
Nfatc2 Intron
Nfatc2 Noncoding-Transcript-Variant
Nfatc2 Splice-Site
Rr571026 within coordinates of
Rr571027 126 bp proximal
 SNP C/T T T T T T T T T T T T T T T T T T T T C T T C T T T T C T T T T T T T T T T T T C T T T T T T T C T T T T
rs581318534
MGI SNP Detail
Alliance Variant		 Chr2:168432069 Cpgi12775 within coordinates of
Nfatc2 Coding-NonSynonymous
Nfatc2 Intron
Nfatc2 mRNA-UTR
Nfatc2 Noncoding-Transcript-Variant
Rr571026 within coordinates of
Rr571027 32 bp proximal
 SNP A/C C C C C C C C C C C C C C C C C C C C C C C A C C C C C C C C C C C C C C C C C A C C C C C C C C C C C C
rs226428723
MGI SNP Detail
Alliance Variant		 Chr2:168432141 Cpgi12775 within coordinates of
Nfatc2 Intron
Nfatc2 mRNA-UTR
Nfatc2 Noncoding-Transcript-Variant
Rr571027 within coordinates of
 SNP A/G A A A A A A A A A A A A A A A A A A G A A G A A A A A A A A A A A A A A A A A G A A A A A A A G A A A A
rs244203654
MGI SNP Detail
Alliance Variant		 Chr2:168432153 Cpgi12775 within coordinates of
Nfatc2 Intron
Nfatc2 mRNA-UTR
Nfatc2 Noncoding-Transcript-Variant
Rr571027 within coordinates of
 SNP G/T G G G G G G G G G G G G G G G G G G G T G G T G G G G T G G G G G G G G G G G G T G G G G G G G T G G G G
rs254321520
MGI SNP Detail
Alliance Variant		 Chr2:168432172 Cpgi12775 within coordinates of
Nfatc2 Intron
Nfatc2 mRNA-UTR
Nfatc2 Noncoding-Transcript-Variant
Rr571027 within coordinates of
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs227223511
MGI SNP Detail
Alliance Variant		 Chr2:168432175 Cpgi12775 within coordinates of
Nfatc2 Intron
Nfatc2 mRNA-UTR
Nfatc2 Noncoding-Transcript-Variant
Rr571027 within coordinates of
 SNP A/G A A A A A A A A A A A A A A A A A A A G A A G A A A A A A A A A A A A A A A A G A A A A A A A G A A A A
rs259783682
MGI SNP Detail
Alliance Variant		 Chr2:168432248 Cpgi12775 within coordinates of
Nfatc2 Intron
Nfatc2 mRNA-UTR
Nfatc2 Noncoding-Transcript-Variant
Rr571027 within coordinates of
Tssr27852 within coordinates of
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs217642564
MGI SNP Detail
Alliance Variant		 Chr2:168432302 Cpgi12775 within coordinates of
Nfatc2 Intron
Nfatc2 Noncoding-Transcript-Variant
Rr571027 within coordinates of
 SNP C/G G G G G G G G G G G G G G G G G G C G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G
rs240745054
MGI SNP Detail
Alliance Variant		 Chr2:168432347 Cpgi12775 within coordinates of
Nfatc2 Intron
Nfatc2 Noncoding-Transcript-Variant
Rr571027 within coordinates of
 SNP A/C C C C C C C C C C C C C C C C C C C A C C C C C C C C C C C C C C C C C C C C C C C C C C C C A C C C
rs246333630
MGI SNP Detail
Alliance Variant		 Chr2:168432352 Cpgi12775 within coordinates of
Nfatc2 Intron
Nfatc2 Noncoding-Transcript-Variant
Rr571027 within coordinates of
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G
SNP ID
(GRCm39)		 Map Position
(GRCm39)		 Gene & Category Variation
Type		 Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
129X1/SvJ
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
MSM/Ms
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PL/J
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs214311835
MGI SNP Detail
Alliance Variant		 Chr2:168432416 Cpgi12775 within coordinates of
Nfatc2 Intron
Nfatc2 Noncoding-Transcript-Variant
Rr571027 within coordinates of
 SNP C/G C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C G C C C C
rs231697919
MGI SNP Detail
Alliance Variant		 Chr2:168432517 Cpgi12775 within coordinates of
Nfatc2 Intron
Nfatc2 Noncoding-Transcript-Variant
Rr571027 within coordinates of
 SNP A/G A A A A A A A A A A A A A A A A A A A G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A
rs250451413
MGI SNP Detail
Alliance Variant		 Chr2:168432626 Cpgi12775 within coordinates of
Nfatc2 Intron
Nfatc2 Noncoding-Transcript-Variant
Rr571027 within coordinates of
 SNP C/G G G G G G G G G G G G G G G G G G G G C G G G G G G G G G G G G G G G G G G G G G G G G G G G G C G G G G
rs212050133
MGI SNP Detail
Alliance Variant		 Chr2:168432685 Cpgi12775 within coordinates of
Nfatc2 Intron
Nfatc2 Noncoding-Transcript-Variant
Rr571027 within coordinates of
 SNP C/T C C C C C C C C C C C C C C C C C C C T C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs234702840
MGI SNP Detail
Alliance Variant		 Chr2:168432731 Cpgi12775 within coordinates of
Nfatc2 Intron
Nfatc2 Noncoding-Transcript-Variant
Rr571027 within coordinates of
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs264272098
MGI SNP Detail
Alliance Variant		 Chr2:168432831 Nfatc2 Intron
Nfatc2 Noncoding-Transcript-Variant
Rr571027 56 bp distal
 SNP G/T G G G G G G G G G G G G G G G G G G G G G G T G G G G T G G G G G G G G G G G G T G G G G G G G G G G G G
rs225908650
MGI SNP Detail
Alliance Variant		 Chr2:168432907 Nfatc2 Intron
Nfatc2 Noncoding-Transcript-Variant
Rr571027 132 bp distal
 SNP C/T T T T T T T T T T T T T T T T T T T T C T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs249397791
MGI SNP Detail
Alliance Variant		 Chr2:168432935 Nfatc2 Intron
Nfatc2 Noncoding-Transcript-Variant
Rr571027 160 bp distal
 SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs251461722
MGI SNP Detail
Alliance Variant		 Chr2:168432952 Nfatc2 Intron
Nfatc2 Noncoding-Transcript-Variant
Rr571027 177 bp distal
 SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs220317860
MGI SNP Detail
Alliance Variant		 Chr2:168432986 Nfatc2 Intron
Nfatc2 Noncoding-Transcript-Variant
Rr571027 211 bp distal
 SNP A/C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C A C C C C
rs237868184
MGI SNP Detail
Alliance Variant		 Chr2:168432990 Nfatc2 Intron
Nfatc2 Noncoding-Transcript-Variant
Rr571027 215 bp distal
 SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs254921403
MGI SNP Detail
Alliance Variant		 Chr2:168433046 Nfatc2 Intron
Nfatc2 Noncoding-Transcript-Variant
Rr571027 271 bp distal
 SNP C/T T T T T T T T T T T T T T T T T T T T C T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs228763000
MGI SNP Detail
Alliance Variant		 Chr2:168433148 Nfatc2 Intron
Nfatc2 Noncoding-Transcript-Variant
Rr571027 373 bp distal
 SNP A/C C C C C C C C C C C C C C C C C C C C A C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C
rs248016386
MGI SNP Detail
Alliance Variant		 Chr2:168433165 Nfatc2 Intron
Nfatc2 Noncoding-Transcript-Variant
Rr571027 390 bp distal
 SNP A/G A A A A A A A A A A A A A A A A A A A G A A G A A A A G A A A A A A A A A A A A G A A A A A A A G A A A A
rs265848045
MGI SNP Detail
Alliance Variant		 Chr2:168433182 Nfatc2 Intron
Nfatc2 Noncoding-Transcript-Variant
Rr571027 407 bp distal
 SNP G/T T T T T T T T T T T T T T T T T T T T G T T G T T T T G T T T T T T T T T T T T G T T T T T T T G T T T T
rs232156788
MGI SNP Detail
Alliance Variant		 Chr2:168433225 Nfatc2 Intron
Nfatc2 Noncoding-Transcript-Variant
Rr571027 450 bp distal
 SNP A/C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C A C C C C
rs246296464
MGI SNP Detail
Alliance Variant		 Chr2:168433259 Nfatc2 Intron
Nfatc2 Noncoding-Transcript-Variant
Rr571027 484 bp distal
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs214270654
MGI SNP Detail
Alliance Variant		 Chr2:168433262 Nfatc2 Intron
Nfatc2 Noncoding-Transcript-Variant
Rr571027 487 bp distal
 SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs225593648
MGI SNP Detail
Alliance Variant		 Chr2:168433290 Nfatc2 Intron
Nfatc2 Noncoding-Transcript-Variant
Rr571027 515 bp distal
 SNP A/G A A A A A A A A A A A A A A A A A A A G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A
rs244159224
MGI SNP Detail
Alliance Variant		 Chr2:168433296 Nfatc2 Intron
Nfatc2 Noncoding-Transcript-Variant
Rr571027 521 bp distal
 SNP A/C A A A A A A A A A A A A A A A A A A A C A A A A A A A A A A A A A A A A A A A A A A A A A A A A C A A A A
rs211996914
MGI SNP Detail
Alliance Variant		 Chr2:168433307 Nfatc2 Intron
Nfatc2 Noncoding-Transcript-Variant
Rr571027 532 bp distal
 SNP C/T T T T T T T T T T T T T T T T T T T T C T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T
rs243038453
MGI SNP Detail
Alliance Variant		 Chr2:168433318 Nfatc2 Intron
Nfatc2 Noncoding-Transcript-Variant
Rr571027 543 bp distal
 SNP A/G A A A A A A A A A A A A A A A A A A A G A A G A A A A G A A A A A A A A A A A A G A A A A A A A G A A A A
rs260930504
MGI SNP Detail
Alliance Variant		 Chr2:168433331 Nfatc2 Intron
Nfatc2 Noncoding-Transcript-Variant
Rr571027 556 bp distal
 SNP C/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G C G G G G
rs218234265
MGI SNP Detail
Alliance Variant		 Chr2:168433345 Nfatc2 Intron
Nfatc2 Noncoding-Transcript-Variant
Rr571027 570 bp distal
 SNP A/G A A A A A A A A A A A A A A A A A A A G A A G A A A A G A A A A A A A A A A A A G A A A A A A A G A A A A
rs233724626
MGI SNP Detail
Alliance Variant		 Chr2:168433386 Nfatc2 Intron
Nfatc2 Noncoding-Transcript-Variant
Rr571027 611 bp distal
 SNP A/T A A A A A A A A A A A A A A A A A A A T A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A
SNP ID
(GRCm39)		 Map Position
(GRCm39)		 Gene & Category Variation
Type		 Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
129X1/SvJ
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
MSM/Ms
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PL/J
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs251361500
MGI SNP Detail
Alliance Variant		 Chr2:168433447 Nfatc2 Intron
Nfatc2 Noncoding-Transcript-Variant
Rr571027 672 bp distal
 SNP A/C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C A C C C C
rs220192483
MGI SNP Detail
Alliance Variant		 Chr2:168433528 Nfatc2 Intron
Nfatc2 Noncoding-Transcript-Variant
Rr571027 753 bp distal
 SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs237829933
MGI SNP Detail
Alliance Variant		 Chr2:168433541 Nfatc2 Intron
Nfatc2 Noncoding-Transcript-Variant
Rr571027 766 bp distal
 SNP A/G G G G G G G G G G G G G G G G G G G G A G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G
rs249183602
MGI SNP Detail
Alliance Variant		 Chr2:168433542 Nfatc2 Intron
Nfatc2 Noncoding-Transcript-Variant
Rr571027 767 bp distal
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C T C C C C T C C C C C C C C C C C C T C C C C C C C C C C C C
rs220895735
MGI SNP Detail
Alliance Variant		 Chr2:168433550 Nfatc2 Intron
Nfatc2 Noncoding-Transcript-Variant
Rr571027 775 bp distal
 SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs251912653
MGI SNP Detail
Alliance Variant		 Chr2:168433563 Nfatc2 Intron
Nfatc2 Noncoding-Transcript-Variant
Rr571027 788 bp distal
 SNP A/G A A A A A A A A A A A A A A A A A A A G A A G A A A A G A A A A A A A A A A A A G A A A A A A A G A A A A
rs263868908
MGI SNP Detail
Alliance Variant		 Chr2:168433648 Nfatc2 Intron
Nfatc2 Noncoding-Transcript-Variant
Rr571027 873 bp distal
 SNP A/C A A A A A A A A A A A A A A A A A A A C A A C A A A A C A A A A A A A A A A A A C A A A A A A A C A A A A
rs232749654
MGI SNP Detail
Alliance Variant		 Chr2:168433673 Nfatc2 Intron
Nfatc2 Noncoding-Transcript-Variant
Rr571027 898 bp distal
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs33348151
MGI SNP Detail
Alliance Variant		 Chr2:168433677 Nfatc2 Intron
Nfatc2 Noncoding-Transcript-Variant
Rr571027 902 bp distal
 SNP A/G A A G A A A
rs258075009
MGI SNP Detail
Alliance Variant		 Chr2:168433750 Nfatc2 Intron
Nfatc2 Noncoding-Transcript-Variant
Rr571027 975 bp distal
 SNP A/G A A A A A A A A A A A A A A A A A A A G A A A A A A A A A A A A A A A A A A A A G A A A A A A A A A A A A
rs225555304
MGI SNP Detail
Alliance Variant		 Chr2:168433797 Nfatc2 Intron
Nfatc2 Noncoding-Transcript-Variant
Rr571027 1022 bp distal
 SNP A/G A A A A A A A A A A A A A A A A A A A G A A G A A A A G A A A A A A A A A A A A G A A A A A A A A A A A A
rs244122497
MGI SNP Detail
Alliance Variant		 Chr2:168433832 Nfatc2 Intron
Nfatc2 Noncoding-Transcript-Variant
Rr571027 1057 bp distal
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G A G G G G A G G G G G G G G G G G G A G G G G G G G G G G G G
rs212117190
MGI SNP Detail
Alliance Variant		 Chr2:168433854 Nfatc2 Intron
Nfatc2 Noncoding-Transcript-Variant
Rr571027 1079 bp distal
 SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs233820704
MGI SNP Detail
Alliance Variant		 Chr2:168433860 Nfatc2 Intron
Nfatc2 Noncoding-Transcript-Variant
Rr571027 1085 bp distal
 SNP C/T T T T T T T T T T T T T T T T T T T T T T T C T T T T C T T T T T T T T T T T T C T T T T T T T T T T T T
rs259221736
MGI SNP Detail
Alliance Variant		 Chr2:168433926 Nfatc2 Intron
Nfatc2 Noncoding-Transcript-Variant
Rr571027 1151 bp distal
 SNP C/T T T T T T T T T T T T T T T T T T T T T T T C T T T T T T T T T T T T T T T T T C T T T T T T T T T T T T
rs218113487
MGI SNP Detail
Alliance Variant		 Chr2:168433929 Nfatc2 Intron
Nfatc2 Noncoding-Transcript-Variant
Rr571027 1154 bp distal
 SNP A/C/T T T T T T T T T T T T T T T T T T T T T T A T T T T C T T T T T T T T T T T T A T T T T T T T C T T T T
rs233599762
MGI SNP Detail
Alliance Variant		 Chr2:168433958 Nfatc2 Intron
Nfatc2 Noncoding-Transcript-Variant
Rr571027 1183 bp distal
 SNP C/T T T T T T T T T T T T T T T T T T T T C T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T
rs245356475
MGI SNP Detail
Alliance Variant		 Chr2:168434049 Nfatc2 Intron
Nfatc2 Noncoding-Transcript-Variant
Rr571027 1274 bp distal
 SNP A/G G G G G G G G G G G G G G G G G G G G A G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G
rs214540534
MGI SNP Detail
Alliance Variant		 Chr2:168434060 Nfatc2 Intron
Nfatc2 Noncoding-Transcript-Variant
Rr571027 1285 bp distal
 SNP A/G/T T T T T T T T T T T T T T T T T T T T G T T A T T T T A T T T T T T T T T T T T G T T T T T T T T T T T T
rs231603868
MGI SNP Detail
Alliance Variant		 Chr2:168434065 Nfatc2 Intron
Nfatc2 Noncoding-Transcript-Variant
Rr571027 1290 bp distal
 SNP A/G G G G G G G G G G G G G G G G G G G G A G G A G G G G A G G G G G G G G G G G G A G G G G G G G A G G G G
rs256546980
MGI SNP Detail
Alliance Variant		 Chr2:168434069 Nfatc2 Intron
Nfatc2 Noncoding-Transcript-Variant
Rr571027 1294 bp distal
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs220486936
MGI SNP Detail
Alliance Variant		 Chr2:168434070 Nfatc2 Intron
Nfatc2 Noncoding-Transcript-Variant
Rr571027 1295 bp distal
 SNP C/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G C G G G G
rs240700389
MGI SNP Detail
Alliance Variant		 Chr2:168434098 Nfatc2 Intron
Nfatc2 Noncoding-Transcript-Variant
Rr571027 1323 bp distal
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs263955572
MGI SNP Detail
Alliance Variant		 Chr2:168434124 Nfatc2 Intron
Nfatc2 Noncoding-Transcript-Variant
Rr571027 1349 bp distal
 SNP C/T T T T T T T T T T T T T T T T T T T T C T T C T T T T C T T T T T T T T T T T T C T T T T T T T C T T T T
rs222225586
MGI SNP Detail
Alliance Variant		 Chr2:168434138 Nfatc2 Intron
Nfatc2 Noncoding-Transcript-Variant
Rr571027 1363 bp distal
 SNP C/G C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C G C C C C
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Showing SNP(s) 1 - 100 of 125
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
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Send questions and comments to User Support. 		last database update
03/25/2025
MGI 6.24 		The Jackson Laboratory