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Mouse SNP Summary
Symbol
Name
ID
Rr572590
regulatory region 572590
MGI:8034722

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Showing SNP(s) 1 - 71 of 71

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SNP ID
(GRCm39)
Map Position
(GRCm39)
Gene & Category Variation
Type
Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PL/J
PWD/PhJ
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs263938306
MGI SNP Detail
Alliance Variant
Chr2:179503265 Cdh4 Intron
Rr572590 1993 bp proximal
SNP C/T T T T T T T T T T T T T T T T T T T T C T T T T T T T T T T T T T T T T T T T T T T T T T C T C T T T
rs222975832
MGI SNP Detail
Alliance Variant
Chr2:179503270 Cdh4 Intron
Rr572590 1988 bp proximal
SNP A/G A A A A A A A A A A A A A A A A A A A G A A G A A A A G G A A A G A A A A A A G A A A A A G A G A A A G
rs578751617
MGI SNP Detail
Alliance Variant
Chr2:179503554 Cdh4 Intron
Rr572590 1704 bp proximal
SNP C/T T T T T T T T T T T T T T T T T T T T T T C T T T T C C T T T C T T T T T T C T T T T T T T T
rs582048774
MGI SNP Detail
Alliance Variant
Chr2:179503661 Cdh4 Intron
Rr572590 1597 bp proximal
SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs239040008
MGI SNP Detail
Alliance Variant
Chr2:179503672 Cdh4 Intron
Rr572590 1586 bp proximal
SNP A/C C C C C C C C C C C C C C C C C C C A C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C
rs257815180
MGI SNP Detail
Alliance Variant
Chr2:179503730 Cdh4 Intron
Rr572590 1528 bp proximal
SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs224938692
MGI SNP Detail
Alliance Variant
Chr2:179503798 Cdh4 Intron
Rr572590 1460 bp proximal
SNP A/C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C A C C C C
rs246478851
MGI SNP Detail
Alliance Variant
Chr2:179503871 Cdh4 Intron
Rr572590 1387 bp proximal
SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs261497408
MGI SNP Detail
Alliance Variant
Chr2:179503872 Cdh4 Intron
Rr572590 1386 bp proximal
SNP A/G A A A A A A A A A A A A A A A A A A A G A A G A A A A G G G A A A G A A A A A A G A A A A A G A G A A A G
rs229238131
MGI SNP Detail
Alliance Variant
Chr2:179503958 Cdh4 Intron
Rr572590 1300 bp proximal
SNP C/G C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C G C C C C
rs253885966
MGI SNP Detail
Alliance Variant
Chr2:179504010 Cdh4 Intron
Rr572590 1248 bp proximal
SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs217328868
MGI SNP Detail
Alliance Variant
Chr2:179504170 Cdh4 Intron
Rr572590 1088 bp proximal
SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs227183268
MGI SNP Detail
Alliance Variant
Chr2:179504216 Cdh4 Intron
Rr572590 1042 bp proximal
SNP A/C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C A C C C C
rs27678761
MGI SNP Detail
Alliance Variant
Chr2:179504306 Cdh4 Intron
Rr572590 952 bp proximal
SNP A/G A A A A A A G A A G A A G A
rs216051605
MGI SNP Detail
Alliance Variant
Chr2:179504440 Cdh4 Intron
Rr572590 818 bp proximal
SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs27678760
MGI SNP Detail
Alliance Variant
Chr2:179504456 Cdh4 Intron
Rr572590 802 bp proximal
SNP A/G G G G G G G A G G G G G G G G
rs256409097
MGI SNP Detail
Alliance Variant
Chr2:179504532 Cdh4 Intron
Rr572590 726 bp proximal
SNP A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A
rs27678759
MGI SNP Detail
Alliance Variant
Chr2:179504616 Cdh4 Intron
Rr572590 642 bp proximal
SNP C/T T T T T T C T T C C T T C T T
rs237578249
MGI SNP Detail
Alliance Variant
Chr2:179504627 Cdh4 Intron
Rr572590 631 bp proximal
SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs27678758
MGI SNP Detail
Alliance Variant
Chr2:179504713 Cdh4 Intron
Rr572590 545 bp proximal
SNP A/G G G G G G G A G G G G G G G G
rs222993673
MGI SNP Detail
Alliance Variant
Chr2:179504830 Cdh4 Intron
Rr572590 428 bp proximal
SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs27678757
MGI SNP Detail
Alliance Variant
Chr2:179504893 Cdh4 Intron
Rr572590 365 bp proximal
SNP C/T C C C C C C T C C C T C C C
rs251774683
MGI SNP Detail
Alliance Variant
Chr2:179504906 Cdh4 Intron
Rr572590 352 bp proximal
SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs219152805
MGI SNP Detail
Alliance Variant
Chr2:179504937 Cdh4 Intron
Rr572590 321 bp proximal
SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs27678756
MGI SNP Detail
Alliance Variant
Chr2:179504999 Cdh4 Intron
Rr572590 259 bp proximal
SNP A/G A A A A A A G A A A G A A G A
SNP ID
(GRCm39)
Map Position
(GRCm39)
Gene & Category Variation
Type
Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PL/J
PWD/PhJ
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs264515463
MGI SNP Detail
Alliance Variant
Chr2:179505035 Cdh4 Intron
Rr572590 223 bp proximal
SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs221040345
MGI SNP Detail
Alliance Variant
Chr2:179505040 Cdh4 Intron
Rr572590 218 bp proximal
SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs250106700
MGI SNP Detail
Alliance Variant
Chr2:179505144 Cdh4 Intron
Rr572590 114 bp proximal
SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs261214506
MGI SNP Detail
Alliance Variant
Chr2:179505201 Cdh4 Intron
Rr572590 57 bp proximal
SNP C/T C C C C C C C C C C C C C C C C C C C T C C C C C C C C C T C C C C C C C C C C C C C C C C T C C C C C T
rs227245539
MGI SNP Detail
Alliance Variant
Chr2:179505252 Cdh4 Intron
Rr572590 6 bp proximal
SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs247111442
MGI SNP Detail
Alliance Variant
Chr2:179505331 Cdh4 Intron
Rr572590 52 bp distal
SNP G/T G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G T G G G G
rs27678755
MGI SNP Detail
Alliance Variant
Chr2:179505373 Cdh4 Intron
Rr572590 94 bp distal
SNP C/T T T T T T T C T T T T T T T T
rs27678754
MGI SNP Detail
Alliance Variant
Chr2:179505393 Cdh4 Intron
Rr572590 114 bp distal
SNP G/T G G G G G G T G G G G G G G G
rs251682533
MGI SNP Detail
Alliance Variant
Chr2:179505407 Cdh4 Intron
Rr572590 128 bp distal
SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs27678753
MGI SNP Detail
Alliance Variant
Chr2:179505408 Cdh4 Intron
Rr572590 129 bp distal
SNP C/T T T T T T T T T T C T T C T
rs27678752
MGI SNP Detail
Alliance Variant
Chr2:179505440 Cdh4 Intron
Rr572590 161 bp distal
SNP C/T C C C C C C T C C C C C C C C
rs247053174
MGI SNP Detail
Alliance Variant
Chr2:179505497 Cdh4 Intron
Rr572590 218 bp distal
SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs217567507
MGI SNP Detail
Alliance Variant
Chr2:179505498 Cdh4 Intron
Rr572590 219 bp distal
SNP G/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T G T T T T
rs27678751
MGI SNP Detail
Alliance Variant
Chr2:179505708 Cdh4 Intron
Rr572590 429 bp distal
SNP A/G A A A A A A A A A A G A A G A
rs27678750
MGI SNP Detail
Alliance Variant
Chr2:179505712 Cdh4 Intron
Rr572590 433 bp distal
SNP C/T C C C C C C T C C C C C C C C
rs27678749
MGI SNP Detail
Alliance Variant
Chr2:179505728 Cdh4 Intron
Rr572590 449 bp distal
SNP C/T T T T T T T C T T C C T T C T
rs238870011
MGI SNP Detail
Alliance Variant
Chr2:179505773 Cdh4 Intron
Rr572590 494 bp distal
SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs255235079
MGI SNP Detail
Alliance Variant
Chr2:179505970 Cdh4 Intron
Rr572590 691 bp distal
SNP A/G G G G G G G G G G G G G G G G G G G G G G G A G G G G A A G G G G A G G G G G G A G G G G G G G G G G G G
rs220671639
MGI SNP Detail
Alliance Variant
Chr2:179506071 Cdh4 Intron
Rr572590 792 bp distal
SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs246957527
MGI SNP Detail
Alliance Variant
Chr2:179506166 Cdh4 Intron
Rr572590 887 bp distal
SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs261263128
MGI SNP Detail
Alliance Variant
Chr2:179506170 Cdh4 Intron
Rr572590 891 bp distal
SNP A/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T A T T T T
rs221027153
MGI SNP Detail
Alliance Variant
Chr2:179506194 Cdh4 Intron
Rr572590 915 bp distal
SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs241221612
MGI SNP Detail
Alliance Variant
Chr2:179506234 Cdh4 Intron
Rr572590 955 bp distal
SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs27678748
MGI SNP Detail
Alliance Variant
Chr2:179506252 Cdh4 Intron
Rr572590 973 bp distal
SNP A/G G G G G G A G G G G G G G
rs230774597
MGI SNP Detail
Alliance Variant
Chr2:179506288 Cdh4 Intron
Rr572590 1009 bp distal
SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
SNP ID
(GRCm39)
Map Position
(GRCm39)
Gene & Category Variation
Type
Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PL/J
PWD/PhJ
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs27678747
MGI SNP Detail
Alliance Variant
Chr2:179506296 Cdh4 Intron
Rr572590 1017 bp distal
SNP C/G C C C C C C G C C C C C C C C
rs27678746
MGI SNP Detail
Alliance Variant
Chr2:179506308 Cdh4 Intron
Rr572590 1029 bp distal
SNP G/T G G G G G G G G G T G G T G
rs578989569
MGI SNP Detail
Alliance Variant
Chr2:179506399 Cdh4 Intron
Rr572590 1120 bp distal
SNP C/G G G G G G G G G G G G G G G G G G G G G G C G G G G C C G G G G C G G G G G G C G G G G G G G G G G G G
rs582986301
MGI SNP Detail
Alliance Variant
Chr2:179506445 Cdh4 Intron
Rr572590 1166 bp distal
SNP C/G G G G G G G G G G G G G G G G G G G G G G G C G G G G C C G G G G C G G G G G G C G G G G G G G G G G G G
rs579760087
MGI SNP Detail
Alliance Variant
Chr2:179506451 Cdh4 Intron
Rr572590 1172 bp distal
SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs27678745
MGI SNP Detail
Alliance Variant
Chr2:179506491 Cdh4 Intron
Rr572590 1212 bp distal
SNP A/G G G G G G G G G G A G G A G
rs27678744
MGI SNP Detail
Alliance Variant
Chr2:179506552 Cdh4 Intron
Rr572590 1273 bp distal
SNP C/T C C C C C C T C C C C C C C C
rs217361962
MGI SNP Detail
Alliance Variant
Chr2:179506577 Cdh4 Intron
Rr572590 1298 bp distal
SNP C/T C C C C C C C C C C C C C C C C C C C C C C T C C C C T T C C C C T C C C C C C T C C C C C C C C C C C C
rs227222855
MGI SNP Detail
Alliance Variant
Chr2:179506578 Cdh4 Intron
Rr572590 1299 bp distal
SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs27678743
MGI SNP Detail
Alliance Variant
Chr2:179506581 Cdh4 Intron
Rr572590 1302 bp distal
SNP G/T G G G G G G T G G G G G G G
rs214531538
MGI SNP Detail
Alliance Variant
Chr2:179506583 Cdh4 Intron
Rr572590 1304 bp distal
SNP A/G G G G G G G G G G G G G G G G G G G G G G G A G G G G A A G G G G A G G G G G G A G G G G G G G G G G G G
rs27678742
MGI SNP Detail
Alliance Variant
Chr2:179506759 Cdh4 Intron
Rr572590 1480 bp distal
SNP G/T G G G G G G T G G G G G G G G
rs27678741
MGI SNP Detail
Alliance Variant
Chr2:179506798 Cdh4 Intron
Rr572590 1519 bp distal
SNP A/G A A A A A A G A A G A A G A
rs27678740
MGI SNP Detail
Alliance Variant
Chr2:179506888 Cdh4 Intron
Rr572590 1609 bp distal
SNP C/T T T T T T T T T T C C T T C T
rs241799587
MGI SNP Detail
Alliance Variant
Chr2:179506895 Cdh4 Intron
Rr572590 1616 bp distal
SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs27678739
MGI SNP Detail
Alliance Variant
Chr2:179506911 Cdh4 Intron
Rr572590 1632 bp distal
SNP G/T T T T T T T G T T T T T T T T
rs27678738
MGI SNP Detail
Alliance Variant
Chr2:179506938 Cdh4 Intron
Rr572590 1659 bp distal
SNP A/G A A A A A G A A G A A G A
rs241274680
MGI SNP Detail
Alliance Variant
Chr2:179506940 Cdh4 Intron
Rr572590 1661 bp distal
SNP C/T T T T T T T T T T T T T T T T T T T T C T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T
rs27678737
MGI SNP Detail
Alliance Variant
Chr2:179507054 Cdh4 Intron
Rr572590 1775 bp distal
SNP C/T T T T T T T C T T C T T C T
rs27678736
MGI SNP Detail
Alliance Variant
Chr2:179507196 Cdh4 Intron
Rr572590 1917 bp distal
SNP G/T T T T T T T G T T T G T T G T
rs240979701
MGI SNP Detail
Alliance Variant
Chr2:179507204 Cdh4 Intron
Rr572590 1925 bp distal
SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
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Showing SNP(s) 1 - 71 of 71

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Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
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last database update
03/25/2025
MGI 6.24
The Jackson Laboratory