Rr572663 Mouse SNP Summary

Mouse SNP Summary

Symbol
Name
ID

Rr572663
regulatory region 572663
MGI:8034795

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Showing SNP(s) 1 - 85 of 85

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SNP ID (GRCm39)	Map Position (GRCm39)	Gene & Category	Variation Type	Allele Summary (all strains)	129P2/OlaHsd	129S1/SvImJ	129S5/SvEvBrd	129X1/SvJ	A/J	AKR/J	B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ	BALB/cByJ	BALB/cJ	BTBR T<+> Itpr3<tf>/J	BUB/BnJ	C3H/HeH	C3H/HeJ	C57BL/10J	C57BL/10SnJ	C57BL/6J	C57BL/6NJ	C57BLKS/J	C57BR/cdJ	C57L/J	C58/J	CAST/EiJ	CBA/J	CE/J	CZECHII/EiJ	DBA/1J	DBA/2J	DDK/Pas	FVB/NJ	I/LnJ	JF1/Ms	JF1/MsJ	KK/HlJ	LEWES/EiJ	LG/J	LP/J	MAI/Pas	MA/MyJ	MOLF/EiJ	MSM/Ms	NOD/ShiLtJ	NON/ShiLtJ	NZB/BlNJ	NZO/HlLtJ	NZW/LacJ	PERA/EiJ	PL/J	PWD/Ph	PWD/PhJ	PWK/PhJ	QSi3/Ianm	QSi5/Ianm	RF/J	RIIIS/J	SEA/GnJ	SEG/Pas	SJL/J	SM/J	SPRET/EiJ	ST/bJ	SWR/J	WSB/EiJ	ZALENDE/EiJ
rs228729831 MGI SNP Detail Alliance Variant	Chr2:179836642	Lama5 Intron Rr572663 1823 bp proximal	SNP	A/G	A	A	A		A	A	A	A	A	A	A	A	A	A	A	A	A		A	A	A	G	A	A	G	A	A		A	A		G	G	A	A	A		A	G		A	A	A	A	A		A			G	A	A	A	A	A		A		G	A	A	A	A
rs248598012 MGI SNP Detail Alliance Variant	Chr2:179836643	Lama5 Intron Rr572663 1822 bp proximal	SNP	A/G	G	G	G		G	G	G	G	G	G	G	G	G	G	G	G	G		G	G	G	G	G	G	G	G	G		G	G		G	G	G	G	G		G	G		G	G	G	G	G		G			G	G	G	G	G	G		G		A	G	G	G	G
rs46474059 MGI SNP Detail Alliance Variant	Chr2:179836706	Lama5 Intron Rr572663 1759 bp proximal	SNP	A/G					G																						G								A																							G
rs27679202 MGI SNP Detail Alliance Variant	Chr2:179836776	Lama5 Intron Rr572663 1689 bp proximal	SNP	C/T		C			C	C		C		C			C									T					C		C				C						C		C				C				C													C
rs250366180 MGI SNP Detail Alliance Variant	Chr2:179836805	Lama5 Intron Rr572663 1660 bp proximal	SNP	A/G	A	A	A		A	A	A	A	A	A	A	A	A	A	A	A	A		A	A	A	A	A	A	A	A	A		A	A		A	A	A	A	A		A	A		A	A	A	A	A		A			A	A	A	A	A	A		A	A	G	A	A	A	A
rs29561241 MGI SNP Detail Alliance Variant	Chr2:179836825	Lama5 Intron Rr572663 1640 bp proximal	SNP	A/G					A											G											A
rs27679201 MGI SNP Detail Alliance Variant	Chr2:179836835	Lama5 Intron Rr572663 1630 bp proximal	SNP	C/T		C		C	C	C		C		T						T						T					C		C				C						C						C																	C
rs27679200 MGI SNP Detail Alliance Variant	Chr2:179836858	Lama5 Intron Rr572663 1607 bp proximal	SNP	C/T		T			T	T		T		T			T									C					T		T				T						T		T				T				T													T
rs29873488 MGI SNP Detail Alliance Variant	Chr2:179836898	Lama5 Intron Rr572663 1567 bp proximal	SNP	G/T				T	T											G											G
rs33049195 MGI SNP Detail Alliance Variant	Chr2:179836904	Lama5 Intron Rr572663 1561 bp proximal	SNP	A/T				T	T											A											A
rs27679199 MGI SNP Detail Alliance Variant	Chr2:179836964	Lama5 Coding-NonSynonymous Rr572663 1501 bp proximal	SNP	A/G		G			G	G		G		G			G									A					G		G				G								G				G																	G
rs224358452 MGI SNP Detail Alliance Variant	Chr2:179836966	Lama5 Coding-Synonymous Rr572663 1499 bp proximal	SNP	C/T	T	T	T		T	T	T	T	T	T	T	T	T	T	T	T	T		T	T	T	T	T	T	C	T	T		T	T		C	C	T	T	T		T	C		T	T	T	T	T		T			C	T	T	T	T	T		T		T	T	T	T	T
rs29578434 MGI SNP Detail Alliance Variant	Chr2:179837064	Lama5 Coding-NonSynonymous Rr572663 1401 bp proximal	SNP	C/T				C	C											C											T
rs257158183 MGI SNP Detail Alliance Variant	Chr2:179837251	Lama5 Coding-Synonymous Rr572663 1214 bp proximal	SNP	A/G	G	G	G		G	G	G	G	G	G	G	G	G	G	G	G	G		G	G	G	A	G	G	G	G	G		G	G		G	G	G	G	G		G	G		G	G	G	G	G		G			G	G	G	G	G	G		G	G	G	G	G	G	G
rs223187342 MGI SNP Detail Alliance Variant	Chr2:179837304	Lama5 Intron Rr572663 1161 bp proximal	SNP	A/T	T	T	T		T	T	T	T	T	T	T	T	T	T	T	T	T		T	T	T	T	T	T	T	T	T		T	T		T	T	T	T	T		T	T		T	T	T	T	T		T			T	T	T	T	T	T		T	T	A	T	T	T	T
rs32972897 MGI SNP Detail Alliance Variant	Chr2:179837332	Lama5 Intron Rr572663 1133 bp proximal	SNP	A/G				G	G											A											G								A																							G
rs257110538 MGI SNP Detail Alliance Variant	Chr2:179837515	Lama5 Intron Rr572663 950 bp proximal	SNP	C/T	T	T	T		T	T	T	T	T	T	T	T	T	T	T	T	T		T	T	T	C	T	T	T	T	T		T	T		T	T	T	T	T		T	T		T	T	T	T	T		T			T	T	T	T	T	T		T	T	T	T	T	T	T
rs222992407 MGI SNP Detail Alliance Variant	Chr2:179837525	Lama5 Intron Rr572663 940 bp proximal	SNP	A/G	G	G	G		G	G	G	G	G	G	G	G	G	G	G	G	G		G	G	G	G	G	G	G	G	G		G	G		G	G	G	G	G		G	G		G	G	G	G	G		G			G	G	G	G	G	G		G	G	A	G	G	G	G
rs243011344 MGI SNP Detail Alliance Variant	Chr2:179837529	Lama5 Intron Rr572663 936 bp proximal	SNP	C/G/T	C	C	C		C	C	C	C	C	C	C	C	C	C	C	C	C		C	C	C	C	C	C	T	C	C		C	C		T	T	C	C	C		C	T		C	C	C	C	C		C			T	C	C	C	C	C		C	C	G	C	C	C	C
rs265454783 MGI SNP Detail Alliance Variant	Chr2:179837530	Lama5 Intron Rr572663 935 bp proximal	SNP	C/G	C	C	C		C	C	C	C	C	C	C	C	C	C	C	C	C		C	C	C	C	C	C	G	C	C		C	C		G	G	C	C	C		C	G		C	C	C	C	C		C			G	C	C	C	C	C		C	C	C	C	C	C	C
rs33369863 MGI SNP Detail Alliance Variant	Chr2:179837542	Lama5 Intron Rr572663 923 bp proximal	SNP	A/G				G	G											A											G								A																							G
rs51714824 MGI SNP Detail Alliance Variant	Chr2:179837555	Lama5 Intron Rr572663 910 bp proximal	SNP	C/T	C	C	C		C	C	C	C	C	C	T	T	T	C	C	C	C		T	T	T	C	C	T	C	C	T		C	C		C	C	C	C	C		C	C		C	C	C	T	T		C			C	C	C	T	C	C		T	C	C	C	C	C	C
rs29536477 MGI SNP Detail Alliance Variant	Chr2:179837621	Lama5 Intron Rr572663 844 bp proximal	SNP	A/G				G	G											A											A								A																							G
rs223152656 MGI SNP Detail Alliance Variant	Chr2:179837708	Lama5 Coding-Synonymous Rr572663 757 bp proximal	SNP	A/C	A	A	A		A	A	A	A	A	A	A	A	A	A	A	A	A		A	A	A	C	A	A	A	A	A		A	A		A	A	C	A	A		C	A		A	A	A	A	A		A			A	A	A	A	A	A		A	A	A	C	A	A	A
rs243068719 MGI SNP Detail Alliance Variant	Chr2:179837750	Lama5 Coding-Synonymous Rr572663 715 bp proximal	SNP	A/G	A	A	A		A	A	A	A	A	A	A	A	A	A	A	A	A		A	A	A	A	A	A	A	A	A		A	A		A	A	A	A	A		A	A		A	A	A	A	A		A			A	A	A	A	A	A		A	A	G	A	A	A	A
SNP ID (GRCm39)	Map Position (GRCm39)	Gene & Category	Variation Type	Allele Summary (all strains)	129P2/OlaHsd	129S1/SvImJ	129S5/SvEvBrd	129X1/SvJ	A/J	AKR/J	B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ	BALB/cByJ	BALB/cJ	BTBR T<+> Itpr3<tf>/J	BUB/BnJ	C3H/HeH	C3H/HeJ	C57BL/10J	C57BL/10SnJ	C57BL/6J	C57BL/6NJ	C57BLKS/J	C57BR/cdJ	C57L/J	C58/J	CAST/EiJ	CBA/J	CE/J	CZECHII/EiJ	DBA/1J	DBA/2J	DDK/Pas	FVB/NJ	I/LnJ	JF1/Ms	JF1/MsJ	KK/HlJ	LEWES/EiJ	LG/J	LP/J	MAI/Pas	MA/MyJ	MOLF/EiJ	MSM/Ms	NOD/ShiLtJ	NON/ShiLtJ	NZB/BlNJ	NZO/HlLtJ	NZW/LacJ	PERA/EiJ	PL/J	PWD/Ph	PWD/PhJ	PWK/PhJ	QSi3/Ianm	QSi5/Ianm	RF/J	RIIIS/J	SEA/GnJ	SEG/Pas	SJL/J	SM/J	SPRET/EiJ	ST/bJ	SWR/J	WSB/EiJ	ZALENDE/EiJ
rs27679198 MGI SNP Detail Alliance Variant	Chr2:179837834	Lama5 Intron Rr572663 631 bp proximal	SNP	A/G		G			G	G		G																			G		G				A						A						G																	G
rs235100137 MGI SNP Detail Alliance Variant	Chr2:179837835	Lama5 Intron Rr572663 630 bp proximal	SNP	C/T	C	C	C		C	C	C	C	C	C	C	C	C	C	C	C	C		C	C	C	C	C	C	C	C	C		C	C		C	C	C	C	C		C	C		C	C	C	C	C		C			C	C	C	C	C	C		C		T	C	C	C	C
rs33580891 MGI SNP Detail Alliance Variant	Chr2:179837850	Lama5 Intron Rr572663 615 bp proximal	SNP	C/T		T			T											C											C								C																							T
rs216442655 MGI SNP Detail Alliance Variant	Chr2:179837863	Lama5 Intron Rr572663 602 bp proximal	SNP	C/T	C	C	C		C	C	C	C	C	C	C	C	C	C	C	C	C		C	C	C	C	C	C	T	C	C		C	C		T	T	C	C	C		C	T		C	C	C	C	C		C			T	C	C	C	C	C		C		C	C	C	C	C
rs238852448 MGI SNP Detail Alliance Variant	Chr2:179837877	Lama5 Intron Rr572663 588 bp proximal	SNP	A/G	G	G	G		G	G	G	G	G	G	G	G	G	G	G	G	G		G	G	G	G	G	G	A	G	G		G	G		A	A	G	G	G		G	A		G	G	G	G	G		G			A	G	G	G	G	G		G		G	G	G	G	G
rs262097466 MGI SNP Detail Alliance Variant	Chr2:179837950	Lama5 Intron Rr572663 515 bp proximal	SNP	A/G	G	G	G		G	G	G	G	G	G	G	G	G	G	G	G	G		G	G	G	G	G	G	A	G	G		G	G		A	A	A	G	G		A	A		G	G	G	G	G		G			A	G	G	G	G	G		G		G	A	G	G	G
rs223537375 MGI SNP Detail Alliance Variant	Chr2:179837956	Lama5 Intron Lama5 Splice-Site Rr572663 509 bp proximal	SNP	C/T	T	T	T		T	T	T	T	T	T	T	T	T	T	T	T	T		T	T	T	C	T	T	T	T	T		T	T		T	T	T	T	T		T	T		T	T	T	T	T		T			T	T	T	T	T	T		T		T	T	T	T	T
rs27679197 MGI SNP Detail Alliance Variant	Chr2:179838126	Lama5 Intron Rr572663 339 bp proximal	SNP	A/G		A			A	A		A		A																	A		A				G						G		A				A				G													A
rs250858584 MGI SNP Detail Alliance Variant	Chr2:179838134	Lama5 Intron Rr572663 331 bp proximal	SNP	A/G	A	A	A		A	A	A	A	A	A	A	A	A	A	A	A	A		A	A	A	G	A	A	A	A	A		A	A		A	A	A	A	A		A	A		A	A	A	A	A		A			A	A	A	A	A	A		A	A	G	A	A	A	A
rs585677720 MGI SNP Detail Alliance Variant	Chr2:179838143	Lama5 Intron Rr572663 322 bp proximal	SNP	C/G	G	G	G		G	G	G	G	G	G	G	G	G	G	G	G	G		G	G	G	G	G	G	G	G	G		G	G		G	G	G	G	G		G	G		G	G	G	G	G		G			G	G	G	G	G	G		G	G	C	G	G	G	G
rs33357223 MGI SNP Detail Alliance Variant	Chr2:179838342	Lama5 Coding-Synonymous Rr572663 123 bp proximal	SNP	C/T		C			C											T											C								T																							C
rs243068210 MGI SNP Detail Alliance Variant	Chr2:179838392	Lama5 Intron Rr572663 73 bp proximal	SNP	A/T	T	T	T		T	T	T	T	T	T	T	T	T	T		T	T		T	T	T		T	T	T	T	T		T	T		T	T	T	T	T		T	T		T	T	T	T	T		T			T			T	T	T				A	T		T
rs29538246 MGI SNP Detail Alliance Variant	Chr2:179838404	Lama5 Intron Rr572663 61 bp proximal	SNP	G/T					T											G											T								G																							T
rs225473564 MGI SNP Detail Alliance Variant	Chr2:179838522	Lama5 Intron Rr572663 within coordinates of	SNP	C/T	C	C	C		C	C	C	C	C	C	C	C	C	C	C	C	C		C	C	C	C	C	C	C	C	C		C	C		C	C		C	C		T	C		C	C	C	C	C		C			C	C	C	C	C	C		C	C	T	T	C	C	C
rs242876175 MGI SNP Detail Alliance Variant	Chr2:179838523	Lama5 Intron Rr572663 within coordinates of	SNP	A/G	A	A	A		A	A	A	A	A	A	A	A	A	A	A	A	A		A	A	A	A	A	A	A	A	A		A	A		A	A		A	A		G	A		A	A	A	A	A		A			A	A	A	A	A	A		A	A	G	G	A	A	A
rs265217250 MGI SNP Detail Alliance Variant	Chr2:179838532	Lama5 Intron Rr572663 within coordinates of	SNP	C/T	T	T	T		T	T	T	T	T	T	T	T	T	T	T	T	T		T	T	T	T	T	T	T	T	T		T	T		T	T		T	T		T	T		T	T	T	T	T		T			T	T	T	T	T	T		T	T	C	T	T	T	T
rs223217567 MGI SNP Detail Alliance Variant	Chr2:179838551	Lama5 Intron Rr572663 within coordinates of	SNP	A/G	A	A	A		A	A	A	A	A	A	A	A	A	A	A	A	A		A	A	A	A	A	A	A	A	A		A	A		A	A		A	A		A	A		A	A	A	A	A		A			A	A	A	A	A	A		A	A	G	A	A	A	A
rs242744069 MGI SNP Detail Alliance Variant	Chr2:179838552	Lama5 Intron Rr572663 within coordinates of	SNP	A/T	T	T	T		T	T	T	T	T	T	T	T	T	T	T	T	T		T	T	T	T	T	T	T	T	T		T	T		T	T		T	T		T	T		T	T	T	T	T		T			T	T	T	T	T	T		T	T	A	T	T	T	T
rs259023263 MGI SNP Detail Alliance Variant	Chr2:179838626	Lama5 Intron Rr572663 within coordinates of	SNP	C/T	C	C	C		C	C	C	C	C	C	C		C	C	C	C	C		C	C	C	T	C	C	C	C	C		C	C		C	C	C	C	C		C	C		C	C	C	C	C		C			C	C	C	C	C	C		C	C	C	C	C	C	C
rs229212229 MGI SNP Detail Alliance Variant	Chr2:179838629	Lama5 Intron Rr572663 within coordinates of	SNP	A/G	G	G	G		G	G	G	G	G	G	G		G	G	G	G	G		G	G	G	G	G	G	G	G	G		G	G		G	G	G	G	G		G	G		G	G	G	G	G		G			G	G	G	G	G	G		G	G	A	G	G	G	G
rs580568197 MGI SNP Detail Alliance Variant	Chr2:179838655	Lama5 Intron Rr572663 6 bp distal	SNP	A/C	C	C	C		C	C	C	C	C	C	C	C	C	C	C	C	C		C	C	C	C	C	C		C	C		C	C		C		C	C	C		C	C		C	C	C	C	C		C			C	C	C	C	C	C		C	C	A	C	C	C	C
rs257179686 MGI SNP Detail Alliance Variant	Chr2:179838700	Lama5 Intron Rr572663 51 bp distal	SNP	A/G	G	G	G		G	G	G	G	G	G	G	G	G	G	G	G	G		G	G	G	G	G	G	G	G	G		G	G		G	G		G	G		G	G		G	G	G	G	G					G	G	G	G	G	G		G	G	A	G	G	G	G
rs216553803 MGI SNP Detail Alliance Variant	Chr2:179838706	Lama5 Intron Rr572663 57 bp distal	SNP	C	C	C	C		C	C	C	C	C	C	C	C	C	C	C	C	C		C	C			C	C	C	C	C		C	C		C	C		C	C		C	C		C	C	C	C	C		C			C	C	C	C	C	C		C	C	C	C	C	C	C
rs245408152 MGI SNP Detail Alliance Variant	Chr2:179838739	Lama5 Intron Rr572663 90 bp distal	SNP	C/T																																			C																							T
rs243337999 MGI SNP Detail Alliance Variant	Chr2:179838806	Lama5 Intron Rr572663 157 bp distal	SNP	G/T	G	G				G	T			T					T	T	T				G						G		G	G											G		G	G			T				G	G			G			G		G
SNP ID (GRCm39)	Map Position (GRCm39)	Gene & Category	Variation Type	Allele Summary (all strains)	129P2/OlaHsd	129S1/SvImJ	129S5/SvEvBrd	129X1/SvJ	A/J	AKR/J	B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ	BALB/cByJ	BALB/cJ	BTBR T<+> Itpr3<tf>/J	BUB/BnJ	C3H/HeH	C3H/HeJ	C57BL/10J	C57BL/10SnJ	C57BL/6J	C57BL/6NJ	C57BLKS/J	C57BR/cdJ	C57L/J	C58/J	CAST/EiJ	CBA/J	CE/J	CZECHII/EiJ	DBA/1J	DBA/2J	DDK/Pas	FVB/NJ	I/LnJ	JF1/Ms	JF1/MsJ	KK/HlJ	LEWES/EiJ	LG/J	LP/J	MAI/Pas	MA/MyJ	MOLF/EiJ	MSM/Ms	NOD/ShiLtJ	NON/ShiLtJ	NZB/BlNJ	NZO/HlLtJ	NZW/LacJ	PERA/EiJ	PL/J	PWD/Ph	PWD/PhJ	PWK/PhJ	QSi3/Ianm	QSi5/Ianm	RF/J	RIIIS/J	SEA/GnJ	SEG/Pas	SJL/J	SM/J	SPRET/EiJ	ST/bJ	SWR/J	WSB/EiJ	ZALENDE/EiJ
rs250909954 MGI SNP Detail Alliance Variant	Chr2:179838866	Lama5 Coding-Synonymous Rr572663 217 bp distal	SNP	A/G	G	G			G	G	G	G	G	G	G	G	G	G	G	G	G		G	G	G	A	G	G	A	G	G		G	G		G	G	G	G	G		G	G		G	G	G	G	G		G			A	G	G	G	G	G		G	G	G	G	G	G	G
rs27679196 MGI SNP Detail Alliance Variant	Chr2:179838875	Lama5 Coding-NonSynonymous Rr572663 226 bp distal	SNP	C/G		C						C		C																			C				C						C										G													C
rs27679195 MGI SNP Detail Alliance Variant	Chr2:179838906	Lama5 Coding-NonSynonymous Rr572663 257 bp distal	SNP	C/T		T			T					T																			T				T						C																							T
rs214551272 MGI SNP Detail Alliance Variant	Chr2:179839190	Lama5 Coding-NonSynonymous Rr572663 541 bp distal	SNP	C/T	C	C	C		C	C	C	C	C	C	C	C	C	C	C	C	C		C	C	C	C	C	C	C	C	C		C	C		C	C	C	C	C		C	C		C	C	C	C	C		C			C	C	C	C	C	C		C		T	C	C	C	C
rs229985106 MGI SNP Detail Alliance Variant	Chr2:179839242	Lama5 Coding-Synonymous Rr572663 593 bp distal	SNP	A/G	G	G	G		G	G	G	G	G	G	G	G	G	G	G	G	G		G	G	G	G	G	G	G	G	G		G	G		G	G	G	G	G		G	G		G	G	G	G	G		G			G	G	G	G	G	G		G		A	G	G	G	G
rs250517643 MGI SNP Detail Alliance Variant	Chr2:179839264	Lama5 Coding-NonSynonymous Rr572663 615 bp distal	SNP	G/T	G	G	G		G	G	G	G	G	G	G	G	G	G	G	G	G		G	G	G	G	G	G	G	G	G		G	G		G	G	G	G	G		G	G		G	G	G	G	G		G			G	G	G	G	G	G		G	G	T	G	G	G	G
rs216713089 MGI SNP Detail Alliance Variant	Chr2:179839284	Lama5 Intron Rr572663 635 bp distal	SNP	A/G	A	A	A		A	A	A	A	A	A	A	A	A	A	A	A	A		A	A	A	A	A	A	G	A	A		A	A		A	A	A	A	A		A	A		A	A	A	A	A		A			G	A	A	A	A	A		A	A	A	A	A	A	A
rs240714514 MGI SNP Detail Alliance Variant	Chr2:179839312	Lama5 Intron Rr572663 663 bp distal	SNP	C/G	C	C	C		C	C	C	C	C	C	C	C	C	C	C	C	C		C	C	C	C	C	C	C	C	C		C	C		C	C	C	C	C		C	C		C	C	C	C	C		C			C	C	C	C	C	C		C	C	G	C	C	C	C
rs263089564 MGI SNP Detail Alliance Variant	Chr2:179839334	Lama5 Intron Rr572663 685 bp distal	SNP	A/T	T	T	T		T	T	T	T	T	T	T	T	T	T	T	T	T		T	T	T	T	T	T	T	T	T		T	T		T	T	T	T	T		T	T		T	T	T	T	T		T			T	T	T	T	T	T		T	T	A	T	T	T	T
rs225259958 MGI SNP Detail Alliance Variant	Chr2:179839335	Lama5 Intron Rr572663 686 bp distal	SNP	A/G	G	G	G		G	G	G	G	G	G	G	G	G	G	G	G	G		G	G	G	G	G	G	A	G	G		G	G		A	A	G	G	G		G	A		G	G	G	G	G		G			A	G	G	G	G	G		G	G	G	G	G	G	G
rs27679194 MGI SNP Detail Alliance Variant	Chr2:179839426	Lama5 Intron Rr572663 777 bp distal	SNP	A/G		A				A																							A				G						G																							A
rs3710863 MGI SNP Detail Alliance Variant	Chr2:179839460	Lama5 Intron Rr572663 811 bp distal	SNP	C/T		T		T	T					C						C						C					C		T				C		C				C										C									T				T
rs217755870 MGI SNP Detail Alliance Variant	Chr2:179839567	Lama5 Intron Lama5 Splice-Site Rr572663 918 bp distal	SNP	A/G	G	G	G		G	G	G	G	G	G	G	G	G	G	G	G	G		G	G	G	A	G	G	A	G	G		G	G		G	G	G	G	G		A	G		G	G	G	G	G		G			A	G	G	G	G	G		G	G	G	A	G	G	G
rs32951209 MGI SNP Detail Alliance Variant	Chr2:179839635	Lama5 Intron Rr572663 986 bp distal	SNP	C/T				C	C											C											T
rs258612408 MGI SNP Detail Alliance Variant	Chr2:179839645	Lama5 Intron Rr572663 996 bp distal	SNP	C/T	C	C	C		C	C	C	C	C	C	C	C	C	C	C	C	C		C	C	C	T	C	C	C	C	C		C	C		C	C	C	C	C		C	C		C	C	C	C	C		C			C	C	C	C	C	C		C	C	C	C	C	C	C
rs228907560 MGI SNP Detail Alliance Variant	Chr2:179839668	Lama5 Intron Rr572663 1019 bp distal	SNP	A/G	A	A	A		A	A	A	A	A	A	A	A	A	A	A	A	A		A	A	A	A	A	A	G	A	A		A	A		G	G	G	A	A		G	G		A	A	A	A	A		A			A	A	A	A	A	A		G		G	G	A	A	A
rs245240159 MGI SNP Detail Alliance Variant	Chr2:179839730	Lama5 Intron Rr572663 1081 bp distal	SNP	C/T	C	C	C		C	C	C	C	C	C	C	C	C	C	C	C	C		C	C	C	T	C	C	C	C	C		C	C		C	C	C	C	C		C	C		C	C	C	C	C		C			C	C	C	C	C	C		C		C	C	C	C	C
rs265702618 MGI SNP Detail Alliance Variant	Chr2:179839755	Lama5 Intron Rr572663 1106 bp distal	SNP	C/G	C	C	C		C	C	C	C	C	C	C	C	C	C	C	C	C		C	C	C	C	C	C	C	C	C		C	C		C	C	C	C	C		C	C		C	C	C	C	C		C			C	C	C	C	C	C		C	C	G	C	C	C	C
rs27679193 MGI SNP Detail Alliance Variant	Chr2:179839776	Lama5 Intron Rr572663 1127 bp distal	SNP	C/T		C			C	C		C		C																	C		C				T						T																							C
rs29871831 MGI SNP Detail Alliance Variant	Chr2:179839802	Lama5 Intron Rr572663 1153 bp distal	SNP	C/T		C		C	C											C											T
rs256118325 MGI SNP Detail Alliance Variant	Chr2:179839805	Lama5 Intron Rr572663 1156 bp distal	SNP	A/G	A	A	A		A	A	A	A	A	A	A	A	A	A	A	A	A		A	A	A	A	A	A	A	A	A		A	A		A	A	G	A	A		A	A		A	A	A	A	A		A			A	A	A	A	A	A		G	A	G	A	A	A	A
rs214612060 MGI SNP Detail Alliance Variant	Chr2:179839908	Lama5 Intron Rr572663 1259 bp distal	SNP	C/T	T	T	T		T	T	T	T	T	T	T	T	T	T	T	T	T		T	T	T	T	T	T	T	T	T		T	T		T	T	T	T	T		T	T		T	T	T	T	T		T			T	T	T	T	T	T		T	T	C	T	T	T	T
rs224389278 MGI SNP Detail Alliance Variant	Chr2:179839914	Lama5 Intron Rr572663 1265 bp distal	SNP	C/T	C	C	C		C	C	C	C	C	C	C	C	C	C	C	C	C		C	C	C	T	C	C	C	C	C		C	C		C	C	C	C	C		C	C		C	C	C	C	C		C			C	C	C	C	C	C		C	C	C	C	C	C	C
rs244408145 MGI SNP Detail Alliance Variant	Chr2:179839943	Lama5 Intron Rr572663 1294 bp distal	SNP	C/G	G	G	G		G	G	G	G	G	G	G	G	G	G	G	G	G		G	G	G	G	G	G	G	G	G		G	G		G	G	C	G	G		G	G		G	G	G	G	G		G			G	G	G	G	G	G		C	G	C	G	G	G	G
rs216766233 MGI SNP Detail Alliance Variant	Chr2:179840087	Lama5 Coding-NonSynonymous Rr572663 1438 bp distal	SNP	C/T	C	C	C		C	C	C	C	C	C	C	C	C	C	C	C	C		C	C	C	T	C	C	C	C	C		C	C		C	C	C	C	C		C	C		C	C	C	C	C		C			C	C	C	C	C	C		C	C	C	C	C	C	C
SNP ID (GRCm39)	Map Position (GRCm39)	Gene & Category	Variation Type	Allele Summary (all strains)	129P2/OlaHsd	129S1/SvImJ	129S5/SvEvBrd	129X1/SvJ	A/J	AKR/J	B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ	BALB/cByJ	BALB/cJ	BTBR T<+> Itpr3<tf>/J	BUB/BnJ	C3H/HeH	C3H/HeJ	C57BL/10J	C57BL/10SnJ	C57BL/6J	C57BL/6NJ	C57BLKS/J	C57BR/cdJ	C57L/J	C58/J	CAST/EiJ	CBA/J	CE/J	CZECHII/EiJ	DBA/1J	DBA/2J	DDK/Pas	FVB/NJ	I/LnJ	JF1/Ms	JF1/MsJ	KK/HlJ	LEWES/EiJ	LG/J	LP/J	MAI/Pas	MA/MyJ	MOLF/EiJ	MSM/Ms	NOD/ShiLtJ	NON/ShiLtJ	NZB/BlNJ	NZO/HlLtJ	NZW/LacJ	PERA/EiJ	PL/J	PWD/Ph	PWD/PhJ	PWK/PhJ	QSi3/Ianm	QSi5/Ianm	RF/J	RIIIS/J	SEA/GnJ	SEG/Pas	SJL/J	SM/J	SPRET/EiJ	ST/bJ	SWR/J	WSB/EiJ	ZALENDE/EiJ
rs243108294 MGI SNP Detail Alliance Variant	Chr2:179840111	Lama5 Coding-NonSynonymous Rr572663 1462 bp distal	SNP	A/T	T	T	T		T	T	T	T	T	T	T	T	T	T	T	T	T		T	T	T	A	T	T	T	T	T		T	T		T	T	T	T	T		T	T		T	T	T	T	T		T			T	T	T	T	T	T		T	T	T	T	T	T	T
rs33614751 MGI SNP Detail Alliance Variant	Chr2:179840136	Lama5 Coding-Synonymous Rr572663 1487 bp distal	SNP	A/G				G	G											G											A
rs32851237 MGI SNP Detail Alliance Variant	Chr2:179840155	Lama5 Coding-NonSynonymous Rr572663 1506 bp distal	SNP	G/T				G	G											G											T
rs27679192 MGI SNP Detail Alliance Variant	Chr2:179840175	Lama5 Coding-Synonymous Rr572663 1526 bp distal	SNP	A/G		G			G	G																					G		G				A						A		G				G																	G
rs27679191 MGI SNP Detail Alliance Variant	Chr2:179840200	Lama5 Intron Rr572663 1551 bp distal	SNP	A/G		G			G					G																			G										A
rs250737249 MGI SNP Detail Alliance Variant	Chr2:179840218	Lama5 Intron Rr572663 1569 bp distal	SNP	C/T	C	C	C		C	C	C	C	C	C	C	C	C	C	C	C	C		C	C	C	C	C	C	C	C	C		C	C		C	C	C	C	C		C	C		C	C	C	C	C		C			C	C	C	C	C	C		C	C	T	C	C	C	C
rs218158330 MGI SNP Detail Alliance Variant	Chr2:179840336	Lama5 Coding-NonSynonymous Rr572663 1687 bp distal	SNP	C/T	C	C	C		C	C	C	C	C	C	C	C	C	C	C	C	C		C	C	C	C	C	C	C	C	C		C	C		C	C	C	C	C		C	C		C	C	C	C	C		C			C	C	C	C	C	C		C		T	C	C	C	C
rs236476764 MGI SNP Detail Alliance Variant	Chr2:179840437	Lama5 Intron Rr572663 1788 bp distal	SNP	C/T	C	C	C		C	C	C	C	C	C	C	C	C	C	C	C	C		C	C	C	C	C	C	C	C	C		C	C		C	C	C	C	C		C	C		C	C	C	C	C		C			C	C	C	C	C	C		C		T	C	C	C	C
rs252434289 MGI SNP Detail Alliance Variant	Chr2:179840569	Lama5 Coding-NonSynonymous Rr572663 1920 bp distal	SNP	A/C	C	C	C		C	C	C	C	C	C	C	C	C	C	C	C	C		C	C	C	A	C	C	C	C	C		C	C		C	C	C	C	C		C	C		C	C	C	C	C		C			C	C	C	C	C	C		C		C	C	C	C	C
rs13476941 MGI SNP Detail Alliance Variant	Chr2:179840597	Lama5 Coding-Synonymous Rr572663 1948 bp distal	SNP	A/G		G		G	G	G		G		A	A		A	A		A		A	A	A	A	G	G	A	G	G	A	G	G	G	G		G		A	G	G	A	G	G	G	G	G		A	A	A	G						G	G	G	A	G	G	A	G	G	G

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Contributing Projects: Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
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