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Mouse SNP Summary
Symbol
Name
ID 		Rr572894
regulatory region 572894
MGI:8035026

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SNP ID
(GRCm39)		 Map Position
(GRCm39)		 Gene & Category Variation
Type		 Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PL/J
PWD/PhJ
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs245772742
MGI SNP Detail
Alliance Variant		 Chr2:180595148 Nkain4 Intron
Nkain4 Noncoding-Transcript-Variant
Rr374382 within coordinates of
Rr572892 within coordinates of
Rr572894 1983 bp proximal
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs258196877
MGI SNP Detail
Alliance Variant		 Chr2:180595159 Nkain4 Intron
Nkain4 Noncoding-Transcript-Variant
Rr374382 within coordinates of
Rr572892 within coordinates of
Rr572894 1972 bp proximal
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs219413795
MGI SNP Detail
Alliance Variant		 Chr2:180595207 Nkain4 Intron
Nkain4 Noncoding-Transcript-Variant
Rr374382 within coordinates of
Rr572892 within coordinates of
Rr572894 1924 bp proximal
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs27648098
MGI SNP Detail
Alliance Variant		 Chr2:180595254 Nkain4 Intron
Nkain4 Noncoding-Transcript-Variant
Rr374382 within coordinates of
Rr572892 within coordinates of
Rr572894 1877 bp proximal
 SNP A/T A A A T A T A A A A A A A
rs254015368
MGI SNP Detail
Alliance Variant		 Chr2:180595259 Nkain4 Intron
Nkain4 Noncoding-Transcript-Variant
Rr374382 within coordinates of
Rr572892 within coordinates of
Rr572894 1872 bp proximal
 SNP A/G G G G G G G G G G G G G G G G G G G G A G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G
rs229000388
MGI SNP Detail
Alliance Variant		 Chr2:180595322 Nkain4 Intron
Nkain4 Noncoding-Transcript-Variant
Rr374382 within coordinates of
Rr572892 within coordinates of
Rr572894 1809 bp proximal
 SNP C/T C C C C C C C C C C C C C C C C C C C T C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs27648097
MGI SNP Detail
Alliance Variant		 Chr2:180595576 Nkain4 Intron
Nkain4 Noncoding-Transcript-Variant
Rr374382 within coordinates of
Rr572892 within coordinates of
Rr572894 1555 bp proximal
 SNP A/G G G G G G G G G G G G G G A G
rs27648096
MGI SNP Detail
Alliance Variant		 Chr2:180595716 Nkain4 Intron
Nkain4 Noncoding-Transcript-Variant
Rr374382 within coordinates of
Rr572892 within coordinates of
Rr572894 1415 bp proximal
 SNP A/G A A A A A A A A A A A A A G A
rs27648095
MGI SNP Detail
Alliance Variant		 Chr2:180595736 Nkain4 Intron
Nkain4 Noncoding-Transcript-Variant
Rr374382 within coordinates of
Rr572892 within coordinates of
Rr572894 1395 bp proximal
 SNP A/T A A A A A A T A A A A A A A A
rs247194133
MGI SNP Detail
Alliance Variant		 Chr2:180595937 Nkain4 Intron
Nkain4 Noncoding-Transcript-Variant
Rr374382 within coordinates of
Rr572892 within coordinates of
Rr572894 1194 bp proximal
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs587433147
MGI SNP Detail
Alliance Variant		 Chr2:180596045 Cpgi12910 within coordinates of
Nkain4 Intron
Nkain4 Noncoding-Transcript-Variant
Rr374382 within coordinates of
Rr572892 within coordinates of
Rr572894 1086 bp proximal
 SNP G/T G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G T G G G G
rs213361162
MGI SNP Detail
Alliance Variant		 Chr2:180596124 Cpgi12910 within coordinates of
Nkain4 Intron
Rr374382 within coordinates of
Rr572892 within coordinates of
Rr572894 1007 bp proximal
 SNP C/T C C C C C C C C C C C C C C C C C C C T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C
rs243324528
MGI SNP Detail
Alliance Variant		 Chr2:180596169 Cpgi12910 within coordinates of
Nkain4 Intron
Rr374382 within coordinates of
Rr572892 within coordinates of
Rr572894 962 bp proximal
 SNP T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T
rs239261305
MGI SNP Detail
Alliance Variant		 Chr2:180596279 Cpgi12910 within coordinates of
Gm14341 within coordinates of
Nkain4 Intron
Rr374382 within coordinates of
Rr572892 within coordinates of
Rr572894 852 bp proximal
 SNP A/G A A A A A A A A A A A A A A A A A A A G A A A A A A A A A A A A A A A A A A A A A A G A A A
rs263939189
MGI SNP Detail
Alliance Variant		 Chr2:180596308 Cpgi12910 within coordinates of
Gm14341 within coordinates of
Nkain4 Intron
Rr374382 within coordinates of
Rr572892 within coordinates of
Rr572894 823 bp proximal
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs226995856
MGI SNP Detail
Alliance Variant		 Chr2:180596388 Cpgi12910 within coordinates of
Gm14341 within coordinates of
Nkain4 Coding-Synonymous
Nkain4 mRNA-UTR
Rr374382 within coordinates of
Rr572892 within coordinates of
Rr572894 743 bp proximal
 SNP A/T A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A T A A A A
rs240465744
MGI SNP Detail
Alliance Variant		 Chr2:180596597 Cpgi12910 within coordinates of
Gm14341 within coordinates of
Nkain4 mRNA-UTR
Rr572893 within coordinates of
Rr572894 534 bp proximal
 SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs252239539
MGI SNP Detail		 Chr2:180596826 Gm14341 within coordinates of
Rr572893 within coordinates of
Rr572894 305 bp proximal
 SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs219448529
MGI SNP Detail		 Chr2:180596941 Gm14341 within coordinates of
Rr572893 within coordinates of
Rr572894 190 bp proximal
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs238483537
MGI SNP Detail		 Chr2:180596978 Gm14341 within coordinates of
Rr572893 within coordinates of
Rr572894 153 bp proximal
 SNP C/G G G G G G G G G G G G G G G G G G G G C G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G
rs27648094
MGI SNP Detail		 Chr2:180596987 Gm14341 within coordinates of
Rr572893 within coordinates of
Rr572894 144 bp proximal
 SNP C/T T T T T T T C T T C C T T C T
rs221322751
MGI SNP Detail		 Chr2:180597038 Gm14341 within coordinates of
Rr572893 within coordinates of
Rr572894 93 bp proximal
 SNP A/C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C A C C C C
rs247612939
MGI SNP Detail		 Chr2:180597058 Gm14341 within coordinates of
Rr572893 within coordinates of
Rr572894 73 bp proximal
 SNP C/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G C G G G G
rs27648093
MGI SNP Detail		 Chr2:180597116 Gm14341 within coordinates of
Rr572893 within coordinates of
Rr572894 15 bp proximal
 SNP A/T T T T T T T T T T A T T A T
rs580166862
MGI SNP Detail		 Chr2:180597244 Gm14341 within coordinates of
Rr572894 within coordinates of
 SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
SNP ID
(GRCm39)		 Map Position
(GRCm39)		 Gene & Category Variation
Type		 Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PL/J
PWD/PhJ
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs583344258
MGI SNP Detail		 Chr2:180597248 Gm14341 within coordinates of
Rr572894 within coordinates of
 SNP A/C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C A C C C C
rs27648092
MGI SNP Detail		 Chr2:180597261 Gm14341 within coordinates of
Rr572894 within coordinates of
 SNP A/G G G G G G G A G G G G G G G G
rs27648091
MGI SNP Detail		 Chr2:180597281 Gm14341 within coordinates of
Rr572894 within coordinates of
 SNP G/T T T T T T T G T T G G T T G T
rs257480378
MGI SNP Detail		 Chr2:180597304 Gm14341 within coordinates of
Rr572894 within coordinates of
 SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs27648090
MGI SNP Detail		 Chr2:180597316 Gm14341 within coordinates of
Rr572894 within coordinates of
 SNP A/G G G G G G G A G G G G G G G G
rs27648089
MGI SNP Detail		 Chr2:180597361 Gm14341 within coordinates of
Rr572894 within coordinates of
 SNP A/T T T T T T T T T T A T T A T
rs212480630
MGI SNP Detail		 Chr2:180597373 Gm14341 within coordinates of
Rr572894 within coordinates of
 SNP A/C A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A C A A A A
rs233814348
MGI SNP Detail		 Chr2:180597382 Gm14341 within coordinates of
Rr572894 within coordinates of
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs27648088
MGI SNP Detail		 Chr2:180597472 Gm14341 within coordinates of
Rr572894 73 bp distal
 SNP A/C C C C C C C C C C C A C C A C
rs219435546
MGI SNP Detail		 Chr2:180597533 Gm14341 within coordinates of
Rr572894 134 bp distal
 SNP C/G C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C G C C C C
rs233063478
MGI SNP Detail		 Chr2:180597542 Gm14341 within coordinates of
Rr572894 143 bp distal
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs252182033
MGI SNP Detail		 Chr2:180597634 Gm14341 within coordinates of
Rr572894 235 bp distal
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs214033066
MGI SNP Detail		 Chr2:180597653 Gm14341 within coordinates of
Rr572894 254 bp distal
 SNP A/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T A T T T T
rs232446286
MGI SNP Detail		 Chr2:180597729 Gm14341 within coordinates of
Rr572894 330 bp distal
 SNP G/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T G T T T T
rs248264262
MGI SNP Detail		 Chr2:180597794 Gm14341 within coordinates of
Rr572894 395 bp distal
 SNP A/C A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A C A A A A
rs27648087
MGI SNP Detail		 Chr2:180597844 Gm14341 within coordinates of
Rr572894 445 bp distal
 SNP A/G G G G G G G G G G G A G G A G
rs581399599
MGI SNP Detail		 Chr2:180597910 Gm14341 within coordinates of
Rr572894 511 bp distal
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs27648086
MGI SNP Detail		 Chr2:180597934 Gm14341 within coordinates of
Rr572894 535 bp distal
 SNP A/T A A A A A A A A A A A A A T A
rs250404351
MGI SNP Detail		 Chr2:180597946 Gm14341 within coordinates of
Rr572894 547 bp distal
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs260985017
MGI SNP Detail		 Chr2:180597948 Gm14341 within coordinates of
Rr572894 549 bp distal
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs224060937
MGI SNP Detail		 Chr2:180598030 Gm14341 within coordinates of
Rr572894 631 bp distal
 SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs241194370
MGI SNP Detail		 Chr2:180598065 Gm14341 within coordinates of
Rr572894 666 bp distal
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs257422682
MGI SNP Detail		 Chr2:180598194 Gm14341 within coordinates of
Rr572894 795 bp distal
 SNP A/C A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A C A A A A
rs27648085
MGI SNP Detail		 Chr2:180598245 Gm14341 within coordinates of
Rr572894 846 bp distal
 SNP C/G C G G C G G G C G G G G C G C C G
rs237135098
MGI SNP Detail		 Chr2:180598268 Gm14341 within coordinates of
Rr572894 869 bp distal
 SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
SNP ID
(GRCm39)		 Map Position
(GRCm39)		 Gene & Category Variation
Type		 Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PL/J
PWD/PhJ
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs264781952
MGI SNP Detail		 Chr2:180598294 Gm14341 within coordinates of
Rr572894 895 bp distal
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs232776758
MGI SNP Detail		 Chr2:180598324 Gm14341 within coordinates of
Rr572894 925 bp distal
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G G G G G G G G G
rs259904595
MGI SNP Detail		 Chr2:180598506 Gm14341 within coordinates of
Rr572894 1107 bp distal
 SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs27648084
MGI SNP Detail		 Chr2:180598678 Gm14341 within coordinates of
Rr572894 1279 bp distal
 SNP A/G A A A A A A G A A G A A G A
rs227354480
MGI SNP Detail		 Chr2:180598711 Gm14341 within coordinates of
Rr572894 1312 bp distal
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs27648083
MGI SNP Detail		 Chr2:180598725 Gm14341 within coordinates of
Rr572894 1326 bp distal
 SNP C/T C C C C C C C C C T C C T C
rs27648082
MGI SNP Detail		 Chr2:180598974 Gm14341 within coordinates of
Rr572894 1575 bp distal
 SNP A/G G G G G G G G G G A A G G G G
rs213892850
MGI SNP Detail		 Chr2:180598987 Gm14341 within coordinates of
Rr572894 1588 bp distal
 SNP G/T G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G T G G G G
rs27648081
MGI SNP Detail		 Chr2:180599067 Gm14341 within coordinates of
Rr572894 1668 bp distal
 SNP A/T T T T T T T A T T A A T T A T
rs255829689
MGI SNP Detail		 Chr2:180599093 Gm14341 within coordinates of
Rr572894 1694 bp distal
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C T C C C C T T C C C C T C C C C C C T C C C C C C C T C C C T
rs213356050
MGI SNP Detail		 Chr2:180599111 Gm14341 within coordinates of
Rr572894 1712 bp distal
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G A G G G G A A G G G G A G G G G G G A G G G G G G G A G G G A
rs584305909
MGI SNP Detail		 Chr2:180599117 Gm14341 within coordinates of
Rr572894 1718 bp distal
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C T C C C C T T C C C C T C C C C C C T C C C C C C C C C C C T
rs27648080
MGI SNP Detail		 Chr2:180599135 Gm14341 within coordinates of
Rr572894 1736 bp distal
 SNP A/T A A A A A A T A A T A A T A
rs27648079
MGI SNP Detail		 Chr2:180599160 Gm14341 within coordinates of
Rr572894 1761 bp distal
 SNP A/C C C C C C C C C C C C C C A C
rs264254748
MGI SNP Detail		 Chr2:180599204 Gm14341 within coordinates of
Rr572894 1805 bp distal
 SNP A/C A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A C A A A A
rs221203846
MGI SNP Detail		 Chr2:180599370 Gm14341 within coordinates of
Rr572894 1971 bp distal
 SNP A/G G G G G G G G G G G G G G G G G G G G A G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
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Showing SNP(s) 1 - 66 of 66
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Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
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MGI 6.24 		The Jackson Laboratory