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Mouse SNP Summary
Symbol
Name
ID 		Rr573053
regulatory region 573053
MGI:8035185

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Showing SNP(s) 1 - 35 of 35

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SNP ID
(GRCm39)		 Map Position
(GRCm39)		 Gene & Category Variation
Type		 Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
129X1/SvJ
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PL/J
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs250279646
MGI SNP Detail
Alliance Variant		 Chr2:181237644 Rr573053 1627 bp proximal
Samd10 mRNA-UTR
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs217044863
MGI SNP Detail
Alliance Variant		 Chr2:181237725 Rr573053 1546 bp proximal
Samd10 mRNA-UTR
 SNP G/T G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G T G G G G
rs235428890
MGI SNP Detail
Alliance Variant		 Chr2:181237771 Rr573053 1500 bp proximal
Samd10 mRNA-UTR
 SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs251503989
MGI SNP Detail
Alliance Variant		 Chr2:181237805 Rr573053 1466 bp proximal
Samd10 mRNA-UTR
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs221543372
MGI SNP Detail
Alliance Variant		 Chr2:181237921 Rr573053 1350 bp proximal
Samd10 mRNA-UTR
 SNP G/T G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G T G G G G
rs236385248
MGI SNP Detail
Alliance Variant		 Chr2:181237951 Rr573053 1320 bp proximal
Samd10 mRNA-UTR
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs262474672
MGI SNP Detail
Alliance Variant		 Chr2:181238409 Rr573053 862 bp proximal
Samd10 Intron
 SNP C/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G C G G G G
rs220512803
MGI SNP Detail
Alliance Variant		 Chr2:181238444 Rr573053 827 bp proximal
Samd10 Intron
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs32967292
MGI SNP Detail
Alliance Variant		 Chr2:181238555 Rr573053 716 bp proximal
Samd10 Coding-NonSynonymous
Samd10 mRNA-UTR
 SNP G/T T T G T
rs254365114
MGI SNP Detail
Alliance Variant		 Chr2:181238604 Rr573053 667 bp proximal
Samd10 Coding-Synonymous
Samd10 mRNA-UTR
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs223481133
MGI SNP Detail
Alliance Variant		 Chr2:181238732 Rr573053 539 bp proximal
Samd10 Intron
 SNP C/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G C G G G G
rs240374740
MGI SNP Detail
Alliance Variant		 Chr2:181238762 Rr573053 509 bp proximal
Samd10 Intron
 SNP A/G G G G G G G G G G A G G G G G G G G G A G A A G G G G A A G G G G A G G G G G G A A A A G G G G G G G G
rs259812291
MGI SNP Detail
Alliance Variant		 Chr2:181238946 Rr573053 325 bp proximal
Samd10 Intron
 SNP A/G G G G G G G G G G A G G G G G G G G G G G A A G G G G A A G G G G A G G G G G G A A A A G G G G A G G G G
rs229907774
MGI SNP Detail
Alliance Variant		 Chr2:181239210 Rr573053 61 bp proximal
Samd10 Intron
 SNP C/T T T T T T T T T T T T T T T T T T T T C T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T
rs243862520
MGI SNP Detail
Alliance Variant		 Chr2:181239230 Rr573053 41 bp proximal
Samd10 Coding-NonSynonymous
Samd10 mRNA-UTR
 SNP C/G C C C C C C C C C G C C C C C C C C C G C G G C C C C G G C C C C G C C C C C C G G G G C C C C G C C C C
rs33014840
MGI SNP Detail
Alliance Variant		 Chr2:181239589 Rr573053 297 bp distal
Samd10 Intron
 SNP A/G G A G A
rs228291082
MGI SNP Detail
Alliance Variant		 Chr2:181239673 Rr573053 381 bp distal
Samd10 Intron
 SNP A/T A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A T A A A A
rs246453158
MGI SNP Detail
Alliance Variant		 Chr2:181239707 Rr573053 415 bp distal
Samd10 Intron
 SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs216989294
MGI SNP Detail
Alliance Variant		 Chr2:181239777 Rr573053 485 bp distal
Samd10 Intron
 SNP C/G G G G G G G G G G C G G G G G G G G G G G C C G G G G C C G G G G C G G G G G G C C C C G G G G G G G G G
rs33040438
MGI SNP Detail
Alliance Variant		 Chr2:181239840 Rr573053 548 bp distal
Samd10 Intron
 SNP C/T C C C T T C
rs245485106
MGI SNP Detail
Alliance Variant		 Chr2:181239927 Rr573053 635 bp distal
Rr573054 within coordinates of
Samd10 Intron
 SNP A/T A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A T A A A A
rs216205042
MGI SNP Detail
Alliance Variant		 Chr2:181239956 Rr573053 664 bp distal
Rr573054 within coordinates of
Samd10 Intron
 SNP G/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T G T T T T
rs238230355
MGI SNP Detail
Alliance Variant		 Chr2:181239959 Rr573053 667 bp distal
Rr573054 within coordinates of
Samd10 Intron
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs258042518
MGI SNP Detail
Alliance Variant		 Chr2:181240164 Rr573053 872 bp distal
Rr573054 within coordinates of
Samd10 Intron
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs212516444
MGI SNP Detail
Alliance Variant		 Chr2:181240250 Rr573053 958 bp distal
Rr573054 within coordinates of
Samd10 Intron
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
SNP ID
(GRCm39)		 Map Position
(GRCm39)		 Gene & Category Variation
Type		 Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
129X1/SvJ
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PL/J
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs235508261
MGI SNP Detail
Alliance Variant		 Chr2:181240264 Rr573053 972 bp distal
Rr573054 within coordinates of
Samd10 Intron
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C C C C C C C C C C C C C C C C T C T C
rs254521895
MGI SNP Detail
Alliance Variant		 Chr2:181240354 Cpgi12932 within coordinates of
Rr573053 1062 bp distal
Rr573054 within coordinates of
Samd10 Intron
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs223428600
MGI SNP Detail
Alliance Variant		 Chr2:181240369 Cpgi12932 within coordinates of
Rr573053 1077 bp distal
Rr573054 within coordinates of
Samd10 Intron
 SNP A/C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C A C C C C
rs240524637
MGI SNP Detail
Alliance Variant		 Chr2:181240459 Cpgi12932 within coordinates of
Rr573053 1167 bp distal
Rr573054 within coordinates of
Samd10 Intron
 SNP A/T A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A T A A A A
rs253453909
MGI SNP Detail
Alliance Variant		 Chr2:181240682 Cpgi12932 within coordinates of
Rr573053 1390 bp distal
Rr573054 within coordinates of
Samd10 Intron
 SNP A/C C C C C C C C C C C C C C C C C C C C A C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C
rs222459416
MGI SNP Detail
Alliance Variant		 Chr2:181240702 Cpgi12932 within coordinates of
Rr573053 1410 bp distal
Rr573054 within coordinates of
Samd10 Coding-NonSynonymous
Samd10 Coding-Synonymous
Samd10 Intron
 SNP C/T T T T T T T T T T C T T T T T T T T T C T C C T T T T C C T T T T C T T T T T T C C C C T T T T C T T T T
rs32877079
MGI SNP Detail
Alliance Variant		 Chr2:181240892 Cpgi12932 within coordinates of
Rr573053 1600 bp distal
Rr573054 within coordinates of
Samd10 mRNA-UTR
 SNP A/G A G A G
rs261325582
MGI SNP Detail
Alliance Variant		 Chr2:181241045 Cpgi12932 within coordinates of
Rr573053 1753 bp distal
Rr573055 within coordinates of
Samd10 mRNA-UTR
Tssr28223 within coordinates of
 SNP C/T T T T T T T T T T C T T T T T T T T T C T C C T T T T C C T T T C T T T T T T C C C C T T T T C T T T T
rs228998762
MGI SNP Detail
Alliance Variant		 Chr2:181241102 Cpgi12932 within coordinates of
Rr573053 1810 bp distal
Rr573055 within coordinates of
Samd10 mRNA-UTR
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs240496581
MGI SNP Detail
Alliance Variant		 Chr2:181241156 Cpgi12932 within coordinates of
Prpf6 Intron
Rr573053 1864 bp distal
Rr573055 within coordinates of
Samd10 mRNA-UTR
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
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Showing SNP(s) 1 - 35 of 35
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
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Send questions and comments to User Support. 		last database update
03/18/2025
MGI 6.24 		The Jackson Laboratory