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Mouse SNP Summary
Symbol
Name
ID
Rr573060
regulatory region 573060
MGI:8035192

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SNP ID
(GRCm39)
Map Position
(GRCm39)
Gene & Category Variation
Type
Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
129X1/SvJ
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PL/J
PWD/PhJ
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs251789810
MGI SNP Detail
Alliance Variant
Chr2:181284473 Prpf6 Intron
Rr573060 1795 bp proximal
SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs27654315
MGI SNP Detail
Alliance Variant
Chr2:181284571 Prpf6 Intron
Rr573060 1697 bp proximal
SNP C/T T T C C T T C C C T C C T T C C
rs231870674
MGI SNP Detail
Alliance Variant
Chr2:181284618 Prpf6 Intron
Rr573060 1650 bp proximal
SNP G/T G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G T G G G G
rs262654639
MGI SNP Detail
Alliance Variant
Chr2:181284623 Prpf6 Intron
Rr573060 1645 bp proximal
SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs220939653
MGI SNP Detail
Alliance Variant
Chr2:181284668 Prpf6 Intron
Rr573060 1600 bp proximal
SNP A/T A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A T A A A A
rs27654314
MGI SNP Detail
Alliance Variant
Chr2:181284790 Prpf6 Intron
Rr573060 1478 bp proximal
SNP A/G G G G G G G A G G G G G G G G
rs264163993
MGI SNP Detail
Alliance Variant
Chr2:181284803 Prpf6 Intron
Rr573060 1465 bp proximal
SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs223567915
MGI SNP Detail
Alliance Variant
Chr2:181284817 Prpf6 Intron
Rr573060 1451 bp proximal
SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs240680517
MGI SNP Detail
Alliance Variant
Chr2:181284975 Prpf6 Intron
Rr573060 1293 bp proximal
SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs260140458
MGI SNP Detail
Alliance Variant
Chr2:181284994 Prpf6 Intron
Rr573060 1274 bp proximal
SNP C/T T T T C C T T T T T C T T T T T T T T T T T C C T T T T C T T C T T T C T T T T T T T C T T T T C T C T
rs225816834
MGI SNP Detail
Alliance Variant
Chr2:181284995 Prpf6 Intron
Rr573060 1273 bp proximal
SNP C/T C C C C C C C C C C C C C C C C C C C C C T C C T C C C C C C C C C C C C C C T C
rs251621061
MGI SNP Detail
Alliance Variant
Chr2:181285003 Prpf6 Intron
Rr573060 1265 bp proximal
SNP A/T T T T A A T T T T T A T T T T T T T T T T A T T T T A T T A T T T A T T T T T T T A T T T A T A T
rs264635658
MGI SNP Detail
Alliance Variant
Chr2:181285042 Prpf6 Intron
Rr573060 1226 bp proximal
SNP A/C C C C A A C C C C A A C C C C C C C A C A A A A C C A A A C C A A C C A C C C A A A A A C C C A A C A C
rs228750616
MGI SNP Detail
Alliance Variant
Chr2:181285043 Prpf6 Intron
Rr573060 1225 bp proximal
SNP G/T T T T G G T T T T G G T T T T T T T G T G G G G T T G G G T T G G T T G T T T G G G G G T T T G G T G T
rs50141797
MGI SNP Detail
Alliance Variant
Chr2:181285051 Prpf6 Intron
Rr573060 1217 bp proximal
SNP T T
rs259021654
MGI SNP Detail
Alliance Variant
Chr2:181285060 Prpf6 Intron
Rr573060 1208 bp proximal
SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs51052847
MGI SNP Detail
Alliance Variant
Chr2:181285068 Prpf6 Intron
Rr573060 1200 bp proximal
SNP G G G
rs48872714
MGI SNP Detail
Alliance Variant
Chr2:181285070 Prpf6 Intron
Rr573060 1198 bp proximal
SNP G G
rs27654313
MGI SNP Detail
Alliance Variant
Chr2:181285179 Prpf6 Intron
Rr573060 1089 bp proximal
SNP C/G C G G C C G G C G G C C G G
rs52229541
MGI SNP Detail
Alliance Variant
Chr2:181285204 Prpf6 Intron
Rr573060 1064 bp proximal
SNP T T T
rs231813038
MGI SNP Detail
Alliance Variant
Chr2:181285216 Prpf6 Intron
Rr573060 1052 bp proximal
SNP A/G A A A A A A A A A A A A A A A A A A G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A
rs255200237
MGI SNP Detail
Alliance Variant
Chr2:181285217 Prpf6 Intron
Rr573060 1051 bp proximal
SNP A/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T A T T T T
rs579905994
MGI SNP Detail
Alliance Variant
Chr2:181285414 Prpf6 Intron
Rr573060 854 bp proximal
SNP C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C
rs583018421
MGI SNP Detail
Alliance Variant
Chr2:181285424 Prpf6 Intron
Rr573060 844 bp proximal
SNP G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G
rs586325172
MGI SNP Detail
Alliance Variant
Chr2:181285428 Prpf6 Intron
Rr573060 840 bp proximal
SNP G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G
SNP ID
(GRCm39)
Map Position
(GRCm39)
Gene & Category Variation
Type
Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
129X1/SvJ
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PL/J
PWD/PhJ
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs27654312
MGI SNP Detail
Alliance Variant
Chr2:181285508 Prpf6 Intron
Rr573060 760 bp proximal
SNP C/T C C C C C C T C C C C C C C C
rs235806234
MGI SNP Detail
Alliance Variant
Chr2:181285581 Prpf6 Intron
Rr573060 687 bp proximal
SNP C/G C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C G C C C C
rs263999943
MGI SNP Detail
Alliance Variant
Chr2:181285595 Prpf6 Intron
Rr573060 673 bp proximal
SNP A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A
rs581611559
MGI SNP Detail
Alliance Variant
Chr2:181285640 Prpf6 Intron
Rr573060 628 bp proximal
SNP A/T A A A A A A A A A A A A A T A A A A A A A A A A A A A A A A A A A A A A A A
rs584073067
MGI SNP Detail
Alliance Variant
Chr2:181285652 Prpf6 Intron
Rr573060 616 bp proximal
SNP A/T A A A A A A A A A A A A A A A A A A A T A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A
rs223707522
MGI SNP Detail
Alliance Variant
Chr2:181285661 Prpf6 Intron
Rr573060 607 bp proximal
SNP G/T G G G G G G G G G T G G G G G G G G G G G T T G G G G T T G G G G T G G G G G G T T T T G G G G G G G G G
rs240811373
MGI SNP Detail
Alliance Variant
Chr2:181285748 Prpf6 Intron
Rr573060 520 bp proximal
SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs260081169
MGI SNP Detail
Alliance Variant
Chr2:181285797 Prpf6 Intron
Rr573060 471 bp proximal
SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs219728952
MGI SNP Detail
Alliance Variant
Chr2:181285805 Prpf6 Intron
Rr573060 463 bp proximal
SNP A/T A A A A A A A A A A A A A A A A A A A A A A A A A A A A A T A A A A A A A A A A A A A A A A A A A T A T A
rs246930577
MGI SNP Detail
Alliance Variant
Chr2:181285821 Prpf6 Intron
Rr573060 447 bp proximal
SNP A/C A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A C A A A A
rs587084953
MGI SNP Detail
Alliance Variant
Chr2:181285868 Prpf6 Intron
Rr573060 400 bp proximal
SNP A/G A A A A A A A A A A A A A A A A A A G A A A A A A A A A A A A A A A A A A A A A A A A A A
rs581412108
MGI SNP Detail
Alliance Variant
Chr2:181285872 Prpf6 Intron
Rr573060 396 bp proximal
SNP A/G A A A A A A A A A A A A A A A A A A A G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A
rs584708357
MGI SNP Detail
Alliance Variant
Chr2:181285876 Prpf6 Intron
Rr573060 392 bp proximal
SNP A/G A A A A A A A A A A A A A A A A A A A G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A
rs586888152
MGI SNP Detail
Alliance Variant
Chr2:181285892 Prpf6 Intron
Rr573060 376 bp proximal
SNP G/T G G G G G G G G G G G G G G G G G G T G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G
rs261563005
MGI SNP Detail
Alliance Variant
Chr2:181285935 Prpf6 Intron
Rr573060 333 bp proximal
SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs229376383
MGI SNP Detail
Alliance Variant
Chr2:181285958 Prpf6 Intron
Rr573060 310 bp proximal
SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs253889806
MGI SNP Detail
Alliance Variant
Chr2:181285987 Prpf6 Intron
Rr573060 281 bp proximal
SNP A/C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C A C C C C
rs33115953
MGI SNP Detail
Alliance Variant
Chr2:181286031 Prpf6 Intron
Rr573060 237 bp proximal
SNP C/T T T C T C
rs226712804
MGI SNP Detail
Alliance Variant
Chr2:181286066 Prpf6 Intron
Rr573060 202 bp proximal
SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs245881677
MGI SNP Detail
Alliance Variant
Chr2:181286191 Prpf6 Intron
Rr573060 77 bp proximal
SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs213420035
MGI SNP Detail
Alliance Variant
Chr2:181286320 Prpf6 Intron
Rr573060 within coordinates of
SNP A/T A A A A A A A A A A A A A A A A A A A T A A A A A A A A A A A A A A A A A A A A A A A A A A A A T A A A A
rs236773951
MGI SNP Detail
Alliance Variant
Chr2:181286502 Prpf6 Intron
Rr573060 41 bp distal
SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs251957917
MGI SNP Detail
Alliance Variant
Chr2:181286555 Prpf6 Intron
Rr573060 94 bp distal
SNP A/G G G G G G G G G G G G G G G G G G G G A G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G
rs212486106
MGI SNP Detail
Alliance Variant
Chr2:181286648 Prpf6 Intron
Rr573060 187 bp distal
SNP G/T G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G T G G G G
rs241752452
MGI SNP Detail
Alliance Variant
Chr2:181286722 Prpf6 Intron
Rr573060 261 bp distal
SNP A/G G G G G G G G G G A G G G G G G G G G G G A G G G G G A A G G G G A G G G G G G A A A A G G G G G G G G G
SNP ID
(GRCm39)
Map Position
(GRCm39)
Gene & Category Variation
Type
Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
129X1/SvJ
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PL/J
PWD/PhJ
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs254794852
MGI SNP Detail
Alliance Variant
Chr2:181286727 Prpf6 Intron
Rr573060 266 bp distal
SNP A/G A A A A A A A A A G A A A A A A A A A G A G A A A A A G G A A A A G A A A A A A G G G G A A A A A A A A A
rs27654311
MGI SNP Detail
Alliance Variant
Chr2:181286936 Prpf6 Intron
Rr573060 475 bp distal
SNP C/T T T C T T T C C T C T T T C
rs234222805
MGI SNP Detail
Alliance Variant
Chr2:181287027 Prpf6 Intron
Rr573060 566 bp distal
SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs253879642
MGI SNP Detail
Alliance Variant
Chr2:181287067 Prpf6 Intron
Rr573060 606 bp distal
SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs27654310
MGI SNP Detail
Alliance Variant
Chr2:181287126 Prpf6 Intron
Rr573060 665 bp distal
SNP A/G A A A A A A G A A G A A A A
rs244344469
MGI SNP Detail
Alliance Variant
Chr2:181287166 Prpf6 Intron
Rr573060 705 bp distal
SNP C/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G C G G G G
rs261071285
MGI SNP Detail
Alliance Variant
Chr2:181287217 Prpf6 Intron
Rr573060 756 bp distal
SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs221626477
MGI SNP Detail
Alliance Variant
Chr2:181287444 Prpf6 Intron
Rr573060 983 bp distal
SNP A/T T T T T T T T T T T T T T T T T T T T A T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T
rs27654309
MGI SNP Detail
Alliance Variant
Chr2:181287480 Prpf6 Intron
Rr573060 1019 bp distal
SNP A/G G G G G G G G G G G A G G G G
rs259807810
MGI SNP Detail
Alliance Variant
Chr2:181287678 Prpf6 Intron
Rr573060 1217 bp distal
SNP G/T G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G T G G G G
rs27654308
MGI SNP Detail
Alliance Variant
Chr2:181287700 Prpf6 Intron
Rr573060 1239 bp distal
SNP A/G G G G G G G A G G A G G G G
rs27654307
MGI SNP Detail
Alliance Variant
Chr2:181287799 Prpf6 Intron
Rr573060 1338 bp distal
SNP A/T T T T T T T T T T T A T T T T
rs27654306
MGI SNP Detail
Alliance Variant
Chr2:181287863 Prpf6 Intron
Rr573060 1402 bp distal
SNP C/T C C C C C C T C C T C C C C
rs255263129
MGI SNP Detail
Alliance Variant
Chr2:181287965 Prpf6 Intron
Rr573060 1504 bp distal
SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs581025422
MGI SNP Detail
Alliance Variant
Chr2:181288107 Prpf6 Intron
Rr573060 1646 bp distal
SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs584156890
MGI SNP Detail
Alliance Variant
Chr2:181288124 Prpf6 Intron
Rr573060 1663 bp distal
SNP A/T A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A T A A A A
rs578443058
MGI SNP Detail
Alliance Variant
Chr2:181288173 Prpf6 Intron
Rr573060 1712 bp distal
SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs231073619
MGI SNP Detail
Alliance Variant
Chr2:181288249 Prpf6 Intron
Rr573060 1788 bp distal
SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs27654305
MGI SNP Detail
Alliance Variant
Chr2:181288270 Prpf6 Intron
Rr573060 1809 bp distal
SNP A/T T T T T A T T T A T T T T
rs213014509
MGI SNP Detail
Alliance Variant
Chr2:181288330 Prpf6 Intron
Rr573060 1869 bp distal
SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C T C
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Showing SNP(s) 1 - 70 of 70

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
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last database update
03/18/2025
MGI 6.24
The Jackson Laboratory

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