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Mouse SNP Summary
Symbol
Name
ID 		Rr573508
regulatory region 573508
MGI:8035640

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SNP ID
(GRCm39)		 Map Position
(GRCm39)		 Gene & Category Variation
Type		 Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PL/J
PWD/PhJ
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs255661338
MGI SNP Detail
Alliance Variant		 Chr3:9869780 Pag1 Intron
Pag1 mRNA-UTR
Rr573508 1932 bp proximal
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs221617226
MGI SNP Detail
Alliance Variant		 Chr3:9869850 Pag1 Intron
Pag1 mRNA-UTR
Rr573508 1862 bp proximal
 SNP A/C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C A C C C C
rs31240241
MGI SNP Detail
Alliance Variant		 Chr3:9869859 Pag1 Intron
Pag1 mRNA-UTR
Rr573508 1853 bp proximal
 SNP C/T C T C C C T
rs29670389
MGI SNP Detail
Alliance Variant		 Chr3:9869911 Pag1 Intron
Pag1 mRNA-UTR
Rr573508 1801 bp proximal
 SNP C/T C C C C C C C C C C C C C T C
rs29670388
MGI SNP Detail
Alliance Variant		 Chr3:9869973 Pag1 Intron
Pag1 mRNA-UTR
Rr573508 1739 bp proximal
 SNP C/G C C C C C C G C C C C C G C
rs232849580
MGI SNP Detail
Alliance Variant		 Chr3:9869983 Pag1 Intron
Pag1 mRNA-UTR
Rr573508 1729 bp proximal
 SNP G/T G G G G G G G G G G G G G G G G G G G T G G G G G G G G G G G G G G G G G G G G G G G G G G G G T G G G G
rs29670387
MGI SNP Detail
Alliance Variant		 Chr3:9870011 Pag1 Intron
Pag1 mRNA-UTR
Rr573508 1701 bp proximal
 SNP C/T C C C C C C C C C C C T C
rs29670386
MGI SNP Detail
Alliance Variant		 Chr3:9870019 Pag1 Intron
Pag1 mRNA-UTR
Rr573508 1693 bp proximal
 SNP C/T C T C C T T C C C C T C C T C
rs29670385
MGI SNP Detail
Alliance Variant		 Chr3:9870038 Pag1 Intron
Pag1 mRNA-UTR
Rr573508 1674 bp proximal
 SNP A/C C C C C C C C C C C C A C
rs29670384
MGI SNP Detail
Alliance Variant		 Chr3:9870238 Pag1 Intron
Pag1 mRNA-UTR
Rr573508 1474 bp proximal
 SNP C/T C C C C C C C C C C C C C C T
rs231083389
MGI SNP Detail
Alliance Variant		 Chr3:9870253 Pag1 Intron
Pag1 mRNA-UTR
Rr573508 1459 bp proximal
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G A G G G G A G G G G G A G G G G G G A G G G G G G G G G G G G
rs29669643
MGI SNP Detail
Alliance Variant		 Chr3:9870312 Pag1 Intron
Pag1 mRNA-UTR
Rr573508 1400 bp proximal
 SNP A/G G G G G G A G G G
rs29669642
MGI SNP Detail
Alliance Variant		 Chr3:9870337 Pag1 Intron
Pag1 mRNA-UTR
Rr573508 1375 bp proximal
 SNP C/T C C C T C C C C C T T
rs232723559
MGI SNP Detail
Alliance Variant		 Chr3:9870339 Pag1 Intron
Pag1 mRNA-UTR
Rr573508 1373 bp proximal
 SNP A/G G A
rs246710860
MGI SNP Detail
Alliance Variant		 Chr3:9870551 Pag1 Intron
Pag1 mRNA-UTR
Rr573508 1161 bp proximal
 SNP A/C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C A C C C C
rs219273339
MGI SNP Detail
Alliance Variant		 Chr3:9870556 Pag1 Intron
Pag1 mRNA-UTR
Rr573508 1156 bp proximal
 SNP A/C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C A C C C C
rs239590776
MGI SNP Detail
Alliance Variant		 Chr3:9870559 Pag1 Intron
Pag1 mRNA-UTR
Rr573508 1153 bp proximal
 SNP A/T A A A A A A A A A A A A A A A A A A A T A A T A A A A T A A A A A T A A A A A A T A A A A A A A T A A A A
rs261576216
MGI SNP Detail
Alliance Variant		 Chr3:9870560 Pag1 Intron
Pag1 mRNA-UTR
Rr573508 1152 bp proximal
 SNP C/T T T T T T T T T T T T T T T T T T T T C T T C T T T T C T T T T T C T T T T T T C T T T T T T T C T T T T
rs220929771
MGI SNP Detail
Alliance Variant		 Chr3:9870588 Pag1 Intron
Pag1 mRNA-UTR
Rr573508 1124 bp proximal
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs232508742
MGI SNP Detail
Alliance Variant		 Chr3:9870599 Pag1 Intron
Pag1 mRNA-UTR
Rr573508 1113 bp proximal
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs250075973
MGI SNP Detail
Alliance Variant		 Chr3:9870646 Pag1 Intron
Pag1 mRNA-UTR
Rr573508 1066 bp proximal
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs221637235
MGI SNP Detail
Alliance Variant		 Chr3:9870654 Pag1 Intron
Pag1 mRNA-UTR
Rr573508 1058 bp proximal
 SNP G/T G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G T G G G G
rs239488497
MGI SNP Detail
Alliance Variant		 Chr3:9870701 Pag1 Intron
Pag1 mRNA-UTR
Rr573508 1011 bp proximal
 SNP A/G A A A A A A A A A A A A A A A A A A A A A A G A A A A G A A A A A G A A A A A A G A A A A A A A A A A A A
rs264320683
MGI SNP Detail
Alliance Variant		 Chr3:9870750 Pag1 Intron
Pag1 mRNA-UTR
Rr573508 962 bp proximal
 SNP A/G G G G G G G G G G G G G G G G G G G G A G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G
rs225885179
MGI SNP Detail
Alliance Variant		 Chr3:9870782 Pag1 Intron
Pag1 mRNA-UTR
Rr573508 930 bp proximal
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
SNP ID
(GRCm39)		 Map Position
(GRCm39)		 Gene & Category Variation
Type		 Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PL/J
PWD/PhJ
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs241789395
MGI SNP Detail
Alliance Variant		 Chr3:9870812 Pag1 Intron
Pag1 mRNA-UTR
Rr573508 900 bp proximal
 SNP A/C C C C C C C C C C A C C C C C C C C C A C C A C C C C A C C C C C A C C C C C C A C C C C C C C A C C A C
rs580546804
MGI SNP Detail
Alliance Variant		 Chr3:9870859 Pag1 Intron
Pag1 mRNA-UTR
Rr573508 853 bp proximal
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs264459641
MGI SNP Detail
Alliance Variant		 Chr3:9870886 Pag1 Intron
Pag1 mRNA-UTR
Rr573508 826 bp proximal
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs230627703
MGI SNP Detail
Alliance Variant		 Chr3:9870904 Pag1 Intron
Pag1 mRNA-UTR
Rr573508 808 bp proximal
 SNP A/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T A T T T T
rs29669641
MGI SNP Detail
Alliance Variant		 Chr3:9871001 Pag1 Intron
Pag1 mRNA-UTR
Rr573508 711 bp proximal
 SNP A/C A A A A A A A A A A A C A
rs29669640
MGI SNP Detail
Alliance Variant		 Chr3:9871043 Pag1 Intron
Pag1 mRNA-UTR
Rr573508 669 bp proximal
 SNP A/T T T T T T T A T T T T T A T
rs259884038
MGI SNP Detail
Alliance Variant		 Chr3:9871065 Pag1 Intron
Pag1 mRNA-UTR
Rr573508 647 bp proximal
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs29669639
MGI SNP Detail
Alliance Variant		 Chr3:9871074 Pag1 Intron
Pag1 mRNA-UTR
Rr573508 638 bp proximal
 SNP A/G A A A A G A A A A A A A
rs584108330
MGI SNP Detail
Alliance Variant		 Chr3:9871125 Pag1 Intron
Pag1 mRNA-UTR
Rr573508 587 bp proximal
 SNP C/T C C C C C C C C C C C C C C C C C C C T C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs248647429
MGI SNP Detail
Alliance Variant		 Chr3:9871239 Pag1 Intron
Pag1 mRNA-UTR
Rr573508 473 bp proximal
 SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs219475795
MGI SNP Detail
Alliance Variant		 Chr3:9871433 Pag1 Intron
Pag1 mRNA-UTR
Rr573508 279 bp proximal
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs242257589
MGI SNP Detail
Alliance Variant		 Chr3:9871529 Pag1 Intron
Pag1 mRNA-UTR
Rr573508 183 bp proximal
 SNP A/C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C A C C C C
rs250062302
MGI SNP Detail
Alliance Variant		 Chr3:9871600 Pag1 Intron
Pag1 mRNA-UTR
Rr573508 112 bp proximal
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs29669638
MGI SNP Detail
Alliance Variant		 Chr3:9871627 Pag1 Intron
Pag1 mRNA-UTR
Rr573508 85 bp proximal
 SNP A/G G G G G A G G G G A G
rs232181763
MGI SNP Detail
Alliance Variant		 Chr3:9871641 Pag1 Intron
Pag1 mRNA-UTR
Rr573508 71 bp proximal
 SNP G/T G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G T G G G G
rs250115693
MGI SNP Detail
Alliance Variant		 Chr3:9871669 Pag1 Intron
Pag1 mRNA-UTR
Rr573508 43 bp proximal
 SNP A/G A A A A A A A A A A A A A A A A A A A G A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs216243319
MGI SNP Detail
Alliance Variant		 Chr3:9871674 Pag1 Intron
Pag1 mRNA-UTR
Rr573508 38 bp proximal
 SNP G/T G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G T G G G G G G G G G G G G
rs29669637
MGI SNP Detail
Alliance Variant		 Chr3:9871677 Pag1 Intron
Pag1 mRNA-UTR
Rr573508 35 bp proximal
 SNP A/G G G G G G G G A G
rs233116885
MGI SNP Detail
Alliance Variant		 Chr3:9871698 Pag1 Intron
Pag1 mRNA-UTR
Rr573508 14 bp proximal
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs264344978
MGI SNP Detail
Alliance Variant		 Chr3:9871707 Pag1 Intron
Pag1 mRNA-UTR
Rr573508 5 bp proximal
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs29669636
MGI SNP Detail
Alliance Variant		 Chr3:9871910 Pag1 Intron
Pag1 mRNA-UTR
Rr573508 within coordinates of
 SNP A/G A A A A A G A A A A A A A A
rs29669635
MGI SNP Detail
Alliance Variant		 Chr3:9871955 Pag1 Intron
Pag1 mRNA-UTR
Rr573508 24 bp distal
 SNP C/T C C C C T C C C C C C C
rs255278187
MGI SNP Detail
Alliance Variant		 Chr3:9871957 Pag1 Intron
Pag1 mRNA-UTR
Rr573508 26 bp distal
 SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs219996732
MGI SNP Detail
Alliance Variant		 Chr3:9872019 Pag1 Intron
Pag1 mRNA-UTR
Rr573508 88 bp distal
 SNP C/T C C C C C C C C C C C C C C C C C C C T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C
rs29669634
MGI SNP Detail
Alliance Variant		 Chr3:9872025 Pag1 Intron
Pag1 mRNA-UTR
Rr573508 94 bp distal
 SNP C/T T T T T T C T T T T T T T
SNP ID
(GRCm39)		 Map Position
(GRCm39)		 Gene & Category Variation
Type		 Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PL/J
PWD/PhJ
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs259922741
MGI SNP Detail
Alliance Variant		 Chr3:9872104 Pag1 Intron
Pag1 mRNA-UTR
Rr573508 173 bp distal
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs227275937
MGI SNP Detail
Alliance Variant		 Chr3:9872216 Pag1 Intron
Pag1 mRNA-UTR
Rr573508 285 bp distal
 SNP A/C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C A C C C C
rs29668883
MGI SNP Detail
Alliance Variant		 Chr3:9872265 Pag1 Intron
Pag1 mRNA-UTR
Rr573508 334 bp distal
 SNP A/G A A A A A A G A A A A A A A A
rs265902568
MGI SNP Detail
Alliance Variant		 Chr3:9872283 Pag1 Intron
Pag1 mRNA-UTR
Rr573508 352 bp distal
 SNP A/G A A A A A A A A A A A A A A A A A A A G A A G A A A A G A A A A A G A A A A A A G A A A A A A A G A A G A
rs228600011
MGI SNP Detail
Alliance Variant		 Chr3:9872303 Pag1 Intron
Pag1 mRNA-UTR
Rr573508 372 bp distal
 SNP A/G A A A A A A A A A A A A A A A A A A A G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A
rs254429725
MGI SNP Detail
Alliance Variant		 Chr3:9872309 Pag1 Intron
Pag1 mRNA-UTR
Rr573508 378 bp distal
 SNP C/G C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C G C C C C
rs29668882
MGI SNP Detail
Alliance Variant		 Chr3:9872336 Pag1 Intron
Pag1 mRNA-UTR
Rr573508 405 bp distal
 SNP C/T T T T T T T C T T T T T T T T
rs226171131
MGI SNP Detail
Alliance Variant		 Chr3:9872408 Pag1 Intron
Pag1 mRNA-UTR
Rr573508 477 bp distal
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C T C C C C T C C C C C T C C C C C C T C C C C C C C T C C C C
rs29668881
MGI SNP Detail
Alliance Variant		 Chr3:9872533 Pag1 Intron
Pag1 mRNA-UTR
Rr573508 602 bp distal
 SNP A/G G G G G G G G G G G G G A G
rs243872465
MGI SNP Detail
Alliance Variant		 Chr3:9872589 Pag1 Intron
Pag1 mRNA-UTR
Rr573508 658 bp distal
 SNP C/G C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C G C C C C
rs29668880
MGI SNP Detail
Alliance Variant		 Chr3:9872704 Pag1 Intron
Pag1 mRNA-UTR
Rr573508 773 bp distal
 SNP A/C C C C C C C C C C C C C A C
rs216276762
MGI SNP Detail
Alliance Variant		 Chr3:9872733 Pag1 Intron
Pag1 mRNA-UTR
Rr573508 802 bp distal
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs29668879
MGI SNP Detail
Alliance Variant		 Chr3:9872753 Pag1 Intron
Pag1 mRNA-UTR
Rr573508 822 bp distal
 SNP A/G G G G G G G A G G G G G A G
rs29668878
MGI SNP Detail
Alliance Variant		 Chr3:9872768 Pag1 Intron
Pag1 mRNA-UTR
Rr573508 837 bp distal
 SNP A/C C C C C C A C C C C C C
rs218504391
MGI SNP Detail
Alliance Variant		 Chr3:9872817 Pag1 Intron
Pag1 mRNA-UTR
Rr573508 886 bp distal
 SNP A/C A A A A A A A A A A A A A A A A A A A C A A C A A A A C A A A A A C A A A A A A C A A A A A A A C A A A A
rs235647112
MGI SNP Detail
Alliance Variant		 Chr3:9872872 Pag1 Intron
Pag1 mRNA-UTR
Rr573508 941 bp distal
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs29668877
MGI SNP Detail
Alliance Variant		 Chr3:9872917 Pag1 Intron
Pag1 mRNA-UTR
Rr573508 986 bp distal
Rr573509 within coordinates of
 SNP C/T T T T C T T T T T T T
rs220038539
MGI SNP Detail
Alliance Variant		 Chr3:9872938 Pag1 Intron
Pag1 mRNA-UTR
Rr573508 1007 bp distal
Rr573509 within coordinates of
 SNP A/C C C C C C C C C C C C C C C C C C C C A C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C
rs238534508
MGI SNP Detail
Alliance Variant		 Chr3:9872942 Pag1 Intron
Pag1 mRNA-UTR
Rr573508 1011 bp distal
Rr573509 within coordinates of
 SNP C/T T T T T T T T T T T T T T T T T T T T C T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T
rs29668876
MGI SNP Detail
Alliance Variant		 Chr3:9873001 Pag1 Intron
Pag1 mRNA-UTR
Rr573508 1070 bp distal
Rr573509 within coordinates of
 SNP A/G A A A A A A A A A A A A G A
rs253274635
MGI SNP Detail
Alliance Variant		 Chr3:9873005 Pag1 Intron
Pag1 mRNA-UTR
Rr573508 1074 bp distal
Rr573509 within coordinates of
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs29668875
MGI SNP Detail
Alliance Variant		 Chr3:9873019 Pag1 Intron
Pag1 mRNA-UTR
Rr573508 1088 bp distal
Rr573509 within coordinates of
 SNP G/T G G G G T G G G G G G G G
rs251335447
MGI SNP Detail
Alliance Variant		 Chr3:9873221 Pag1 Intron
Pag1 mRNA-UTR
Rr573508 1290 bp distal
Rr573509 within coordinates of
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs263996326
MGI SNP Detail
Alliance Variant		 Chr3:9873250 Pag1 Intron
Pag1 mRNA-UTR
Rr573508 1319 bp distal
Rr573509 within coordinates of
 SNP G/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T G T T T T
rs229122486
MGI SNP Detail
Alliance Variant		 Chr3:9873281 Pag1 Intron
Pag1 mRNA-UTR
Rr573508 1350 bp distal
 SNP A/G G G G G G G G G G G G G G G G G G G G A G G A G G G G A G G G G G A G G G G G G A G G G G G G G A G G G G
SNP ID
(GRCm39)		 Map Position
(GRCm39)		 Gene & Category Variation
Type		 Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PL/J
PWD/PhJ
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs240971426
MGI SNP Detail
Alliance Variant		 Chr3:9873417 Pag1 Intron
Pag1 mRNA-UTR
Rr573508 1486 bp distal
 SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs254072648
MGI SNP Detail
Alliance Variant		 Chr3:9873521 Pag1 Intron
Pag1 mRNA-UTR
Rr573508 1590 bp distal
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs226207878
MGI SNP Detail
Alliance Variant		 Chr3:9873544 Pag1 Intron
Pag1 mRNA-UTR
Rr573508 1613 bp distal
 SNP C/T C C C C C C C C C C C C C C C C C C C T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C
rs243909725
MGI SNP Detail
Alliance Variant		 Chr3:9873554 Pag1 Intron
Pag1 mRNA-UTR
Rr573508 1623 bp distal
 SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs216031354
MGI SNP Detail
Alliance Variant		 Chr3:9873581 Pag1 Intron
Pag1 mRNA-UTR
Rr573508 1650 bp distal
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs226894840
MGI SNP Detail
Alliance Variant		 Chr3:9873623 Pag1 Intron
Pag1 mRNA-UTR
Rr573508 1692 bp distal
 SNP A/C A A A A A A A A A C A A A A A A A A A C A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A
rs260562506
MGI SNP Detail
Alliance Variant		 Chr3:9873627 Pag1 Intron
Pag1 mRNA-UTR
Rr573508 1696 bp distal
 SNP G/T T T T T T T T T T G T T T T T T T T T G T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T
rs29668874
MGI SNP Detail
Alliance Variant		 Chr3:9873743 Pag1 Intron
Pag1 mRNA-UTR
Rr573508 1812 bp distal
 SNP A/G A G A A A A
rs237489189
MGI SNP Detail
Alliance Variant		 Chr3:9873782 Pag1 Intron
Pag1 mRNA-UTR
Rr573508 1851 bp distal
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
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Showing SNP(s) 1 - 84 of 84
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
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Send questions and comments to User Support. 		last database update
03/18/2025
MGI 6.24 		The Jackson Laboratory
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