About   Help   FAQ
Mouse SNP Summary
Symbol
Name
ID
Rr574046
regulatory region 574046
MGI:8036178

<< first < prev12 next > last >>
Showing SNP(s) 1 - 100 of 137

Your search exceeds the maximum result limit of 100,000 SNPs that can be displayed or exported to text. Use filters to refine your search or select a sub-region from the SNP Density Heatmap.
Loading...
Show only selected strains with alleles     Show all selected strains    
Drag columns to re-order.   Column order is reset with Filter or Show option change.
SNP ID
(GRCm39)
Map Position
(GRCm39)
Gene & Category Variation
Type
Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
129X1/SvJ
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
MSM/Ms
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PL/J
PWD/PhJ
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs33557663
MGI SNP Detail
Alliance Variant
Chr3:20017509 Cp Intron
Cp Noncoding-Transcript-Variant
Rr574044 within coordinates of
Rr574046 1971 bp proximal
SNP C/G C C C C C C C C C C G C C G C
rs244052450
MGI SNP Detail
Alliance Variant
Chr3:20017526 Cp Intron
Cp Noncoding-Transcript-Variant
Rr574044 within coordinates of
Rr574046 1954 bp proximal
SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs257273576
MGI SNP Detail
Alliance Variant
Chr3:20017597 Cp Intron
Cp Noncoding-Transcript-Variant
Rr574046 1883 bp proximal
SNP G/T G G G G G G G G G G G G G G G G G G G T G G G G G G G G G G G G G G G G G G G G G G T G G G G G G G G G G
rs226227239
MGI SNP Detail
Alliance Variant
Chr3:20017614 Cp Intron
Cp Noncoding-Transcript-Variant
Rr574046 1866 bp proximal
SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T T C T T T T T T C T T T T T T T C T T T T
rs256759366
MGI SNP Detail
Alliance Variant
Chr3:20017626 Cp Intron
Cp Noncoding-Transcript-Variant
Rr574046 1854 bp proximal
SNP G/T T T T T T T T T T T T T T T T T T T T T T T T T T T T G T T T T T G T T T T T T G T T T T T T T G T T T T
rs216131122
MGI SNP Detail
Alliance Variant
Chr3:20017660 Cp Intron
Cp Noncoding-Transcript-Variant
Rr574046 1820 bp proximal
SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C C T C C C C C C T C C C C C C C T C C C C
rs241471555
MGI SNP Detail
Alliance Variant
Chr3:20017661 Cp Intron
Cp Noncoding-Transcript-Variant
Rr574046 1819 bp proximal
SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A A G A A A A A A G A A A A A A A G A A A A
rs254142866
MGI SNP Detail
Alliance Variant
Chr3:20017681 Cp Intron
Cp Noncoding-Transcript-Variant
Rr574046 1799 bp proximal
SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T T C T T T T T T C T T T T T T T T T T T T
rs580157423
MGI SNP Detail
Alliance Variant
Chr3:20017723 Cp Intron
Cp Noncoding-Transcript-Variant
Rr574046 1757 bp proximal
SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs217445356
MGI SNP Detail
Alliance Variant
Chr3:20017737 Cp Intron
Cp Noncoding-Transcript-Variant
Rr574046 1743 bp proximal
SNP A/G G G G G G G G G G G G G G G G G G A G G G G G G G G G G G G G G G G G G G G G G A G G G G G G G G G G
rs230191448
MGI SNP Detail
Alliance Variant
Chr3:20017763 Cp Intron
Cp Noncoding-Transcript-Variant
Rr574046 1717 bp proximal
SNP A/G A A A A A A A A A A A A A A A A A A A A A A G A A A A G A A A A A G A A A A A A G A A A A A A A G A A A A
rs249068749
MGI SNP Detail
Alliance Variant
Chr3:20017781 Cp Intron
Cp Noncoding-Transcript-Variant
Rr574046 1699 bp proximal
SNP G/T T T T T T T T T T T T T T T T T T T T T T T T T T T T G T T T T T G T T T T T T G T T T T T T T G T T T T
rs213752523
MGI SNP Detail
Alliance Variant
Chr3:20017863 Cp Intron
Cp Noncoding-Transcript-Variant
Rr574046 1617 bp proximal
SNP G/T G G G G G G G G G G G G G G G G G G G T G G T G G G G T G G G G G T G G G G G G T G T G G G G G T G G G G
rs237060028
MGI SNP Detail
Alliance Variant
Chr3:20017916 Cp Intron
Cp Noncoding-Transcript-Variant
Rr574046 1564 bp proximal
SNP A/C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C A C C C C
rs262898256
MGI SNP Detail
Alliance Variant
Chr3:20017928 Cp Intron
Cp Noncoding-Transcript-Variant
Rr574046 1552 bp proximal
SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs224904728
MGI SNP Detail
Alliance Variant
Chr3:20017939 Cp Intron
Cp Noncoding-Transcript-Variant
Rr574046 1541 bp proximal
SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs249995429
MGI SNP Detail
Alliance Variant
Chr3:20017943 Cp Intron
Cp Noncoding-Transcript-Variant
Rr574046 1537 bp proximal
SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G G G G G G G G G
rs260819623
MGI SNP Detail
Alliance Variant
Chr3:20017957 Cp Intron
Cp Noncoding-Transcript-Variant
Rr574046 1523 bp proximal
SNP A/G G G G G G G G G G G G G G G G G G G G A G G A G G G G A G G G G G A G G G G G G A G A G G G G G A G G G G
rs218036249
MGI SNP Detail
Alliance Variant
Chr3:20018075 Cp Intron
Cp Noncoding-Transcript-Variant
Rr574046 1405 bp proximal
SNP G/T G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G T G G G G
rs237867006
MGI SNP Detail
Alliance Variant
Chr3:20018079 Cp Intron
Cp Noncoding-Transcript-Variant
Rr574046 1401 bp proximal
SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs33558396
MGI SNP Detail
Alliance Variant
Chr3:20018121 Cp Intron
Cp Noncoding-Transcript-Variant
Rr574046 1359 bp proximal
SNP A/G G G G G G G G G G G A G G A G
rs226266684
MGI SNP Detail
Alliance Variant
Chr3:20018136 Cp Intron
Cp Noncoding-Transcript-Variant
Rr574046 1344 bp proximal
SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs244732512
MGI SNP Detail
Alliance Variant
Chr3:20018139 Cp Intron
Cp Noncoding-Transcript-Variant
Rr574046 1341 bp proximal
SNP A/C A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A C A A A A
rs265604295
MGI SNP Detail
Alliance Variant
Chr3:20018160 Cp Intron
Cp Noncoding-Transcript-Variant
Rr574046 1320 bp proximal
SNP C/T C C C C C C C C C C C C C C C C C C C T C C T C C C C T C C C C C T C C C C C C T C T C C C C C T C C C C
rs232690372
MGI SNP Detail
Alliance Variant
Chr3:20018176 Cp Intron
Cp Noncoding-Transcript-Variant
Rr574046 1304 bp proximal
SNP A/C A A A A A A A A A A A A A A A A A A A C A A C A A A A C A A A A A C A A A A A A C A C A A A A A C A A A A
SNP ID
(GRCm39)
Map Position
(GRCm39)
Gene & Category Variation
Type
Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
129X1/SvJ
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
MSM/Ms
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PL/J
PWD/PhJ
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs259652790
MGI SNP Detail
Alliance Variant
Chr3:20018185 Cp Intron
Cp Noncoding-Transcript-Variant
Rr574046 1295 bp proximal
SNP C/G C C C C C C C C C C C C C C C C C C C G C C G C C C C G C C C C C G C C C C C C G C G C C C C C G C C C C
rs33558398
MGI SNP Detail
Alliance Variant
Chr3:20018250 Cp Intron
Cp Noncoding-Transcript-Variant
Rr574046 1230 bp proximal
SNP G/T T T T T T T G T T T G T T G T
rs223702669
MGI SNP Detail
Alliance Variant
Chr3:20018298 Cp Intron
Cp Noncoding-Transcript-Variant
Rr574046 1182 bp proximal
SNP A/G A A A A A A A A A A A A A A A A A A A G A A G A A A A G A A A A A G A A A A A A G A G A A A A A G A A A A
rs243270547
MGI SNP Detail
Alliance Variant
Chr3:20018310 Cp Intron
Cp Noncoding-Transcript-Variant
Rr574046 1170 bp proximal
SNP A/G A A A A A A A A A A A A A A A A A A A G A A G A A A A G A A A A A G A A A A A A G A G A A A A A A A A A A
rs213789807
MGI SNP Detail
Alliance Variant
Chr3:20018347 Cp Intron
Cp Noncoding-Transcript-Variant
Rr574046 1133 bp proximal
SNP C/T T T T T T T T T T T T T T T T T T T T C T T C T T T T C T T T T T C T T T T T T C T C T T T T T C T T T T
rs239070722
MGI SNP Detail
Alliance Variant
Chr3:20018353 Cp Intron
Cp Noncoding-Transcript-Variant
Rr574046 1127 bp proximal
SNP A/G A A A A A A A A A A A A A A A A A A A G A A G A A A A G A A A A A G A A A A A A G A G A A A A A G A A A A
rs258678315
MGI SNP Detail
Alliance Variant
Chr3:20018371 Cp Intron
Cp Noncoding-Transcript-Variant
Rr574046 1109 bp proximal
SNP C/T C C C C C C C C C C C C C C C C C C C T C C C C C C C C C C C C C C C C C C C C C T C C C C C T C C C C
rs33558400
MGI SNP Detail
Alliance Variant
Chr3:20018373 Cp Intron
Cp Noncoding-Transcript-Variant
Rr574046 1107 bp proximal
SNP A/G A A A A A A G A A A A A A A A
rs33558403
MGI SNP Detail
Alliance Variant
Chr3:20018397 Cp Intron
Cp Noncoding-Transcript-Variant
Rr574046 1083 bp proximal
SNP A/G A A A A A A G A A A G A A G A
rs255221614
MGI SNP Detail
Alliance Variant
Chr3:20018399 Cp Intron
Cp Noncoding-Transcript-Variant
Rr574046 1081 bp proximal
SNP C/G C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C G C C C C
rs218077634
MGI SNP Detail
Alliance Variant
Chr3:20018428 Cp Intron
Cp Noncoding-Transcript-Variant
Rr574046 1052 bp proximal
SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs237906199
MGI SNP Detail
Alliance Variant
Chr3:20018457 Cp Coding-NonSynonymous
Cp Noncoding-Transcript-Variant
Rr574046 1023 bp proximal
SNP A/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T A T T T T
rs251034523
MGI SNP Detail
Alliance Variant
Chr3:20018591 Cp Coding-Synonymous
Cp Noncoding-Transcript-Variant
Rr574046 889 bp proximal
SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs223082088
MGI SNP Detail
Alliance Variant
Chr3:20018602 Cp Coding-NonSynonymous
Cp Noncoding-Transcript-Variant
Rr574046 878 bp proximal
SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs33559406
MGI SNP Detail
Alliance Variant
Chr3:20018714 Cp Intron
Cp Noncoding-Transcript-Variant
Rr574046 766 bp proximal
SNP C/T C C C C C C T C C C T C C T C
rs263429756
MGI SNP Detail
Alliance Variant
Chr3:20018724 Cp Intron
Cp Noncoding-Transcript-Variant
Rr574046 756 bp proximal
SNP A/C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C A C C C C
rs33552014
MGI SNP Detail
Alliance Variant
Chr3:20018759 Cp Intron
Cp Noncoding-Transcript-Variant
Rr574045 within coordinates of
Rr574046 721 bp proximal
SNP C/T C C C C C C T C C C T C C T C
rs247989375
MGI SNP Detail
Alliance Variant
Chr3:20018791 Cp Intron
Cp Noncoding-Transcript-Variant
Rr574045 within coordinates of
Rr574046 689 bp proximal
SNP C/G C C C C C C C C C C C C C C C C C C C C C C G C C C C G C C C C C G C C C C C C G C C C C C C C C C C C C
rs260233642
MGI SNP Detail
Alliance Variant
Chr3:20018806 Cp Intron
Cp Noncoding-Transcript-Variant
Rr574045 within coordinates of
Rr574046 674 bp proximal
SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs223745366
MGI SNP Detail
Alliance Variant
Chr3:20018807 Cp Intron
Cp Noncoding-Transcript-Variant
Rr574045 within coordinates of
Rr574046 673 bp proximal
SNP A/C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C A C C C C
rs33552017
MGI SNP Detail
Alliance Variant
Chr3:20018808 Cp Intron
Cp Noncoding-Transcript-Variant
Rr574045 within coordinates of
Rr574046 672 bp proximal
SNP A/G A A A A A A A A A G A A G A
rs255602992
MGI SNP Detail
Alliance Variant
Chr3:20018838 Cp Intron
Cp Noncoding-Transcript-Variant
Rr574045 within coordinates of
Rr574046 642 bp proximal
SNP A/T T T T T T T T T T T T T T T T T T T T T T T A T T T T A T T T T T A T T T T T T A T T T T T T T T T T T T
rs33552020
MGI SNP Detail
Alliance Variant
Chr3:20018902 Cp Intron
Cp Noncoding-Transcript-Variant
Rr574045 within coordinates of
Rr574046 578 bp proximal
SNP G/T G G G G G G T G G G G G G
rs257471606
MGI SNP Detail
Alliance Variant
Chr3:20018943 Cp Intron
Cp Noncoding-Transcript-Variant
Rr574045 within coordinates of
Rr574046 537 bp proximal
SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs33552023
MGI SNP Detail
Alliance Variant
Chr3:20018962 Cp Intron
Cp Noncoding-Transcript-Variant
Rr574045 within coordinates of
Rr574046 518 bp proximal
SNP A/G A A A A A A G A A A G A A G A
SNP ID
(GRCm39)
Map Position
(GRCm39)
Gene & Category Variation
Type
Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
129X1/SvJ
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
MSM/Ms
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PL/J
PWD/PhJ
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs33552786
MGI SNP Detail
Alliance Variant
Chr3:20019006 Cp Intron
Cp Noncoding-Transcript-Variant
Rr574045 within coordinates of
Rr574046 474 bp proximal
SNP A/G G G G G G G G G G A G G A G
rs248795010
MGI SNP Detail
Alliance Variant
Chr3:20019148 Cp Intron
Cp Noncoding-Transcript-Variant
Rr574045 within coordinates of
Rr574046 332 bp proximal
SNP G/T G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G T G G G G
rs212013479
MGI SNP Detail
Alliance Variant
Chr3:20019180 Cp Intron
Cp Noncoding-Transcript-Variant
Rr574045 within coordinates of
Rr574046 300 bp proximal
SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C C T C C C C C C T C C C C C C C T C C C C
rs230485717
MGI SNP Detail
Alliance Variant
Chr3:20019214 Cp Intron
Cp Noncoding-Transcript-Variant
Rr574045 within coordinates of
Rr574046 266 bp proximal
SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs251070351
MGI SNP Detail
Alliance Variant
Chr3:20019235 Cp Intron
Cp Noncoding-Transcript-Variant
Rr574046 245 bp proximal
SNP C/T C C C C C C C C C C C C C C C C C C C T C C C C C C C C C C C C C C C C C C C C C C T C C C C C C C C C C
rs222988232
MGI SNP Detail
Alliance Variant
Chr3:20019255 Cp Intron
Cp Noncoding-Transcript-Variant
Rr574046 225 bp proximal
SNP C/T T T T T T T T T T T T T T T T T T T T T T T C T T T T C T T T T T C T T T T T T C T T T T T T T T T T T T
rs237700406
MGI SNP Detail
Alliance Variant
Chr3:20019262 Cp Intron
Cp Noncoding-Transcript-Variant
Rr574046 218 bp proximal
SNP C/G G G G G G G G G G G G G G G G G G G G G G G C G G G G C G C G G G C G G G G G G C G G G G G G G G G G G G
rs33552789
MGI SNP Detail
Alliance Variant
Chr3:20019303 Cp Intron
Cp Noncoding-Transcript-Variant
Rr574046 177 bp proximal
SNP A/C C C C C C C A C C C C C C C C
rs225481785
MGI SNP Detail
Alliance Variant
Chr3:20019374 Cp Intron
Cp Noncoding-Transcript-Variant
Rr574046 106 bp proximal
SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs241225858
MGI SNP Detail
Alliance Variant
Chr3:20019381 Cp Intron
Cp Noncoding-Transcript-Variant
Rr574046 99 bp proximal
SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs260247359
MGI SNP Detail
Alliance Variant
Chr3:20019382 Cp Intron
Cp Noncoding-Transcript-Variant
Rr574046 98 bp proximal
SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs218250415
MGI SNP Detail
Alliance Variant
Chr3:20019392 Cp Intron
Cp Noncoding-Transcript-Variant
Rr574046 88 bp proximal
SNP A/G G G G G G G G G G G G G G G G G G G G A G G A G G G G G G G G G G G G G G G G G G G A G G G G G A G G G G
rs237065272
MGI SNP Detail
Alliance Variant
Chr3:20019405 Cp Intron
Cp Noncoding-Transcript-Variant
Rr574046 75 bp proximal
SNP A/C A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A C A A A A
rs255752050
MGI SNP Detail
Alliance Variant
Chr3:20019448 Cp Intron
Cp Noncoding-Transcript-Variant
Rr574046 32 bp proximal
SNP C/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G C G G G G
rs231473198
MGI SNP Detail
Alliance Variant
Chr3:20019450 Cp Intron
Cp Noncoding-Transcript-Variant
Rr574046 30 bp proximal
SNP C/T C C C C C C C C C C C C C C C C C C C T C C C C C C C C C C C C C C C C C C C C C C T C C C C C T C C C C
rs252484358
MGI SNP Detail
Alliance Variant
Chr3:20019453 Cp Intron
Cp Noncoding-Transcript-Variant
Rr574046 27 bp proximal
SNP A/G A A A A A A A A A A A A A A A A A A A G A A A A A A A A A A A A A A A A A A A A A A G A A A A A A A A A A
rs265750659
MGI SNP Detail
Alliance Variant
Chr3:20019461 Cp Intron
Cp Noncoding-Transcript-Variant
Rr574046 19 bp proximal
SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs233204184
MGI SNP Detail
Alliance Variant
Chr3:20019469 Cp Intron
Cp Noncoding-Transcript-Variant
Rr574046 11 bp proximal
SNP A/T A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A T A A A A
rs33552792
MGI SNP Detail
Alliance Variant
Chr3:20019471 Cp Intron
Cp Noncoding-Transcript-Variant
Rr574046 9 bp proximal
SNP A/C C C C C C C C C C A C C A C
rs212052389
MGI SNP Detail
Alliance Variant
Chr3:20019493 Cp Intron
Cp Noncoding-Transcript-Variant
Rr574046 within coordinates of
SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs230605404
MGI SNP Detail
Alliance Variant
Chr3:20019495 Cp Intron
Cp Noncoding-Transcript-Variant
Rr574046 within coordinates of
SNP A/G G G G G G G G G G G G G G G G G G G G A G G A G G G G A G G G G G A G G G G G G A G A G G G G G G G G G G
rs33553575
MGI SNP Detail
Alliance Variant
Chr3:20019510 Cp Intron
Cp Noncoding-Transcript-Variant
Rr574046 within coordinates of
SNP C/T C C C C C C T C C C T C C C
rs214657633
MGI SNP Detail
Alliance Variant
Chr3:20019551 Cp Intron
Cp Noncoding-Transcript-Variant
Rr574046 within coordinates of
SNP A/G G G G G G G G G G G G G G G G G G G G A G G A G G G G A G G G G G A G G G G G G A G A G G G G G A G G G G
rs239801729
MGI SNP Detail
Alliance Variant
Chr3:20019553 Cp Intron
Cp Noncoding-Transcript-Variant
Rr574046 within coordinates of
SNP C/G C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C G C C C C
rs259234252
MGI SNP Detail
Alliance Variant
Chr3:20019558 Cp Intron
Cp Noncoding-Transcript-Variant
Rr574046 within coordinates of
SNP A/G G G G G G G G G G G G G G G G G G G G A G G G G G G G G G G G G G G G G G G G G G G A G G G G G G G G G G
SNP ID
(GRCm39)
Map Position
(GRCm39)
Gene & Category Variation
Type
Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
129X1/SvJ
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
MSM/Ms
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PL/J
PWD/PhJ
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs225901426
MGI SNP Detail
Alliance Variant
Chr3:20019563 Cp Intron
Cp Noncoding-Transcript-Variant
Rr574046 within coordinates of
SNP A/T A A A A A A A A A A A A A A A A A A A T A A T A A A A T A A A A A T A A A A A A T A T A A A A A T A A A A
rs234858279
MGI SNP Detail
Alliance Variant
Chr3:20019645 Cp Intron
Cp Noncoding-Transcript-Variant
Rr574046 within coordinates of
SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs247903305
MGI SNP Detail
Alliance Variant
Chr3:20019664 Cp Intron
Cp Noncoding-Transcript-Variant
Rr574046 within coordinates of
SNP C/T C C C C C C C C C C C C C C C C C C C T C C C C C C C C C C C C C C C C C C C C C C T C C C C C C C C C C
rs218375923
MGI SNP Detail
Alliance Variant
Chr3:20019670 Cp Intron
Cp Noncoding-Transcript-Variant
Rr574046 within coordinates of
SNP C/T C C C C C C C C C C C C C C C C C C C T C C C C C C C C C C C C C C C C C C C C C C T C C C C C C C C C C
rs108885226
MGI SNP Detail
Alliance Variant
Chr3:20019671 Cp Intron
Cp Noncoding-Transcript-Variant
Rr574046 within coordinates of
SNP A/G G G G A
rs108738758
MGI SNP Detail
Alliance Variant
Chr3:20019678 Cp Intron
Cp Noncoding-Transcript-Variant
Rr574046 within coordinates of
SNP C/T T T T C
rs108437484
MGI SNP Detail
Alliance Variant
Chr3:20019679 Cp Intron
Cp Noncoding-Transcript-Variant
Rr574046 within coordinates of
SNP C/G C C C G
rs265166700
MGI SNP Detail
Alliance Variant
Chr3:20019689 Cp Intron
Cp Noncoding-Transcript-Variant
Rr574046 within coordinates of
SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs580444138
MGI SNP Detail
Alliance Variant
Chr3:20019722 Cp Intron
Cp Noncoding-Transcript-Variant
Rr574046 within coordinates of
SNP A/G G G G G G G G G G G G G G G G G G G G A G G G G G G G G G G G G G G G G G G G G G G A G G G G G G G G G G
rs223771161
MGI SNP Detail
Alliance Variant
Chr3:20019738 Cp Intron
Cp Noncoding-Transcript-Variant
Rr574046 within coordinates of
SNP C/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G C G G G G
rs248228694
MGI SNP Detail
Alliance Variant
Chr3:20019754 Cp Intron
Cp Noncoding-Transcript-Variant
Rr574046 within coordinates of
SNP G/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T G T T T T
rs108466516
MGI SNP Detail
Alliance Variant
Chr3:20019815 Cp Intron
Cp Noncoding-Transcript-Variant
Rr574046 40 bp distal
SNP C/T C C C T
rs228621182
MGI SNP Detail
Alliance Variant
Chr3:20019894 Cp Intron
Cp Noncoding-Transcript-Variant
Rr574046 119 bp distal
SNP G/T G G G G G G G G G G G G G G G G G G G T G G G G G G G G G G G G G G G G G G G G G G T G G G G G G G G G G
rs242928080
MGI SNP Detail
Alliance Variant
Chr3:20019962 Cp Intron
Cp Noncoding-Transcript-Variant
Rr574046 187 bp distal
SNP A/G G G G G G G G G G G G G G G G G G G G G G G A G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs33553578
MGI SNP Detail
Alliance Variant
Chr3:20019984 Cp Intron
Cp Noncoding-Transcript-Variant
Rr574046 209 bp distal
SNP G/T T T T T T T G T T T G G T T G T
rs225029509
MGI SNP Detail
Alliance Variant
Chr3:20019995 Cp Intron
Cp Noncoding-Transcript-Variant
Rr574046 220 bp distal
SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G G G G G G G G G
rs245008668
MGI SNP Detail
Alliance Variant
Chr3:20020009 Cp Intron
Cp Noncoding-Transcript-Variant
Rr574046 234 bp distal
SNP A/C C C C C C C C C C C C C C C C C C C C A C C C C C C C C C C C C C C C C C C C C C C A C C C C C A C C C C
rs215073689
MGI SNP Detail
Alliance Variant
Chr3:20020027 Cp Intron
Cp Noncoding-Transcript-Variant
Rr574046 252 bp distal
SNP C/T T T T T T T T T T T T T T T T T T T T C T T T T T T T T T T T T T T T T T T T T T T C T T T T T T T T T T
rs231561255
MGI SNP Detail
Alliance Variant
Chr3:20020057 Cp Intron
Cp Noncoding-Transcript-Variant
Rr574046 282 bp distal
SNP A/G G G G G G G G G G G G G G G G G G G G A G G G G G G G G G G G G G G G G G G G G G G A G G G G G A G G G G
rs108918991
MGI SNP Detail
Alliance Variant
Chr3:20020090 Cp Intron
Cp Noncoding-Transcript-Variant
Rr574046 315 bp distal
SNP C/T T T C
rs108552966
MGI SNP Detail
Alliance Variant
Chr3:20020113 Cp Intron
Cp Noncoding-Transcript-Variant
Rr574046 338 bp distal
SNP A/C A A C
rs33553581
MGI SNP Detail
Alliance Variant
Chr3:20020215 Cp Intron
Cp Noncoding-Transcript-Variant
Rr574046 440 bp distal
SNP C/T T T T T T T T C T T T C C T T C T
rs579903877
MGI SNP Detail
Alliance Variant
Chr3:20020257 Cp Intron
Cp Noncoding-Transcript-Variant
Rr574046 482 bp distal
SNP A/T A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A T A A A A
rs33554304
MGI SNP Detail
Alliance Variant
Chr3:20020329 Cp Intron
Cp Noncoding-Transcript-Variant
Rr574046 554 bp distal
SNP A/G G G G G G G G G G G A G G A G
rs212595698
MGI SNP Detail
Alliance Variant
Chr3:20020408 Cp Coding-NonSynonymous
Cp Noncoding-Transcript-Variant
Cp Splice-Site
Rr574046 633 bp distal
SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
<< first < prev12 next > last >>
Showing SNP(s) 1 - 100 of 137

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
Citing These Resources
Funding Information
Warranty Disclaimer, Privacy Notice, Licensing, & Copyright
Send questions and comments to User Support.
last database update
03/18/2025
MGI 6.24
The Jackson Laboratory