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Mouse SNP Summary
Symbol
Name
ID
Rr574090
regulatory region 574090
MGI:8036222

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Showing SNP(s) 1 - 83 of 83

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SNP ID
(GRCm39)
Map Position
(GRCm39)
Gene & Category Variation
Type
Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
129X1/SvJ
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PL/J
PWD/PhJ
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs264115706
MGI SNP Detail
Chr3:20707631 Rr574090 1998 bp proximal
SNP A/G A A A A A A A A A A A A A A A A A A A G A A G A A A A G A A A A A G A A A A A A G A G A A A A A G A A A A
rs225607669
MGI SNP Detail
Chr3:20707659 Rr574090 1970 bp proximal
SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs248823734
MGI SNP Detail
Chr3:20707688 Rr574090 1941 bp proximal
SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs258538604
MGI SNP Detail
Chr3:20707694 Rr574090 1935 bp proximal
SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs220230141
MGI SNP Detail
Chr3:20707710 Rr574090 1919 bp proximal
SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs238840253
MGI SNP Detail
Chr3:20707712 Rr574090 1917 bp proximal
SNP A/G A A A A A A A A A A A A A A A A A A A A A A G A A A A G A A A A A A A A A A A A G A A A A A A A G A A A A
rs256811021
MGI SNP Detail
Chr3:20707748 Rr574090 1881 bp proximal
SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs30361128
MGI SNP Detail
Chr3:20707818 Rr574090 1811 bp proximal
SNP C/T C C T C C T
rs242933233
MGI SNP Detail
Chr3:20707823 Rr574090 1806 bp proximal
SNP G/T G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G T G G G G
rs265978753
MGI SNP Detail
Chr3:20707826 Rr574090 1803 bp proximal
SNP G/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T G T T T T
rs232622142
MGI SNP Detail
Chr3:20707828 Rr574090 1801 bp proximal
SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs30847540
MGI SNP Detail
Chr3:20707880 Rr574090 1749 bp proximal
SNP C/G G G C G G C
rs215103937
MGI SNP Detail
Chr3:20707887 Rr574090 1742 bp proximal
SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G G G G G G G G G
rs225657237
MGI SNP Detail
Chr3:20707906 Rr574090 1723 bp proximal
SNP C/G C C C C C C C C C C C C C C C C C C C G C C G C C C C G C C C C C G C C C C C C G C G C C C C C G C C C C
rs243459369
MGI SNP Detail
Chr3:20707911 Rr574090 1718 bp proximal
SNP A/C A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A C A A A A
rs212555185
MGI SNP Detail
Chr3:20707961 Rr574090 1668 bp proximal
SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs229677270
MGI SNP Detail
Chr3:20707978 Rr574090 1651 bp proximal
SNP C/T C C C C C C C C C C C C C C C C C C C T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C
rs260698984
MGI SNP Detail
Chr3:20707986 Rr574090 1643 bp proximal
SNP C/T C C C C C C C C C C C C C C C C C C C T C C T C C C C T C C C C C T C C C C C C T C T C C C C C T C C C C
rs217786745
MGI SNP Detail
Chr3:20708067 Rr574090 1562 bp proximal
SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs238473901
MGI SNP Detail
Chr3:20708113 Rr574090 1516 bp proximal
SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs30655381
MGI SNP Detail
Chr3:20708175 Rr574090 1454 bp proximal
SNP A/G G G A G G A
rs30508377
MGI SNP Detail
Chr3:20708259 Rr574090 1370 bp proximal
SNP A/G A A A G A A G G A A A A G A A G G
rs238826980
MGI SNP Detail
Chr3:20708264 Rr574090 1365 bp proximal
SNP G/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T G T T T T
rs250459274
MGI SNP Detail
Chr3:20708291 Rr574090 1338 bp proximal
SNP A/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T A T T T T
rs218201701
MGI SNP Detail
Chr3:20708331 Rr574090 1298 bp proximal
SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
SNP ID
(GRCm39)
Map Position
(GRCm39)
Gene & Category Variation
Type
Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
129X1/SvJ
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PL/J
PWD/PhJ
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs251506261
MGI SNP Detail
Chr3:20708356 Rr574090 1273 bp proximal
SNP G/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T G T T T T
rs264069063
MGI SNP Detail
Chr3:20708400 Rr574090 1229 bp proximal
SNP A/C A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A C A A A A
rs233284809
MGI SNP Detail
Chr3:20708408 Rr574090 1221 bp proximal
SNP G/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T G T T T T
rs30897757
MGI SNP Detail
Chr3:20708457 Rr574090 1172 bp proximal
SNP A/C A A A C A C
rs256587385
MGI SNP Detail
Chr3:20708476 Rr574090 1153 bp proximal
SNP G/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T G T T T T
rs225644412
MGI SNP Detail
Chr3:20708526 Rr574090 1103 bp proximal
SNP A/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T A T T T T T T T T T T T
rs243402432
MGI SNP Detail
Chr3:20708537 Rr574090 1092 bp proximal
SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs254268368
MGI SNP Detail
Chr3:20708607 Rr574090 1022 bp proximal
SNP C/T C C C C C C C C C C C C C C C C C C C T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C
rs229574481
MGI SNP Detail
Chr3:20708626 Rr574090 1003 bp proximal
SNP A/G G G G G G G G G G G G G G G G G G G G G G G A G G G G A G G G G G G G G G G G G A G G G G G G G A G G G G
rs259742266
MGI SNP Detail
Chr3:20708792 Rr574090 837 bp proximal
SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs47835094
MGI SNP Detail
Chr3:20709137 Rr574090 492 bp proximal
SNP A/G G G G G G G A G G G G G G G
rs46514668
MGI SNP Detail
Chr3:20709140 Rr574090 489 bp proximal
SNP A/C C C C C C C C C A C C C C C
rs50462936
MGI SNP Detail
Chr3:20709196 Rr574090 433 bp proximal
SNP A/G G G G G G G A G G G G G G G
rs51905235
MGI SNP Detail
Chr3:20709231 Rr574090 398 bp proximal
SNP A/C C C C C C C C C C C C C C A
rs580204953
MGI SNP Detail
Chr3:20709300 Rr574090 329 bp proximal
SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs214276011
MGI SNP Detail
Chr3:20709342 Rr574090 287 bp proximal
SNP A/T T T T T T T T T T T T T T T T T T T A T T T T T T T T T T T T T T T T T T T T T T T T T T A T T T T
rs231604092
MGI SNP Detail
Chr3:20709418 Rr574090 211 bp proximal
SNP A/G G G G G G G G G G G G G G G G G G G G A G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs250398941
MGI SNP Detail
Chr3:20709470 Rr574090 159 bp proximal
SNP C/T T T T T T T T T T T T T T T T T T T T C T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T
rs218106302
MGI SNP Detail
Chr3:20709669 Rr574089 within coordinates of
Rr574090 19 bp distal
SNP A/G G G G G G G G G G G G G G G G G G G G G G G A G G G G A G G G G G G G G G G G G A G G G G G G G G G G G G
rs240312217
MGI SNP Detail
Chr3:20709714 Rr574089 within coordinates of
Rr574090 64 bp distal
SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs31189472
MGI SNP Detail
Chr3:20709758 Rr574089 within coordinates of
Rr574090 108 bp distal
SNP C/G C C C C G C C G G C C C C G C C G G
rs225059569
MGI SNP Detail
Chr3:20709835 Rr574089 within coordinates of
Rr574090 185 bp distal
SNP G/T G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G T G G G G
rs248002693
MGI SNP Detail
Chr3:20709838 Rr574089 within coordinates of
Rr574090 188 bp distal
SNP G/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T G T T T T
rs256546545
MGI SNP Detail
Chr3:20709843 Rr574089 within coordinates of
Rr574090 193 bp distal
SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs219588418
MGI SNP Detail
Chr3:20709852 Rr574089 within coordinates of
Rr574090 202 bp distal
SNP A/C A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A C A A A A
SNP ID
(GRCm39)
Map Position
(GRCm39)
Gene & Category Variation
Type
Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
129X1/SvJ
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PL/J
PWD/PhJ
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs52117618
MGI SNP Detail
Chr3:20709953 Rr574090 303 bp distal
SNP A/G G G G G G G A G G G G G G G
rs46554066
MGI SNP Detail
Chr3:20710058 Rr574090 408 bp distal
SNP C/T C C C C C C C C C T C C C
rs49753839
MGI SNP Detail
Chr3:20710085 Rr574090 435 bp distal
SNP A/G G G G G G G A G G G G G G G G
rs254289138
MGI SNP Detail
Chr3:20710118 Rr574090 468 bp distal
SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs265835480
MGI SNP Detail
Chr3:20710156 Rr574090 506 bp distal
SNP G/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T G T T T T
rs51639000
MGI SNP Detail
Chr3:20710164 Rr574090 514 bp distal
SNP A/C A A A A A A C A A A C A A A
rs256946554
MGI SNP Detail
Chr3:20710188 Rr574090 538 bp distal
SNP G/T T T T T T T T T T T T T T T T T T T T G T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T
rs49418522
MGI SNP Detail
Chr3:20710270 Rr574090 620 bp distal
SNP A/G G G G G G G A G G G G G G G
rs47496215
MGI SNP Detail
Chr3:20710347 Rr574090 697 bp distal
SNP C/G C C C C G C C G C C C C G C C G G
rs244133619
MGI SNP Detail
Chr3:20710383 Rr574090 733 bp distal
SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs47801663
MGI SNP Detail
Chr3:20710441 Rr574090 791 bp distal
SNP A/G G G G G G G A G G G G G G G
rs51488653
MGI SNP Detail
Chr3:20710533 Rr574090 883 bp distal
SNP C/T T T T T T T C T T T T T T T
rs46989202
MGI SNP Detail
Chr3:20710553 Rr574090 903 bp distal
SNP C/T C C C C C C T C C C C C C C
rs30103763
MGI SNP Detail
Chr3:20710644 Rr574090 994 bp distal
SNP C/T C C C C T C C T T C C C C T C C T T
rs237989214
MGI SNP Detail
Chr3:20710735 Rr574090 1085 bp distal
SNP A/C A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A C A A A A
rs250568707
MGI SNP Detail
Chr3:20710777 Rr574090 1127 bp distal
SNP A/C A A A A A A A A A A A A A A A A A A A C A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A
rs48550574
MGI SNP Detail
Chr3:20710807 Rr574090 1157 bp distal
SNP A/G A A A A A A G A A A A A A A
rs236873278
MGI SNP Detail
Chr3:20710893 Rr574090 1243 bp distal
SNP A/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T A T T T T
rs254111574
MGI SNP Detail
Chr3:20710940 Rr574090 1290 bp distal
SNP C/T T T T T T T T T T T T T T T T T T T C T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T
rs227081564
MGI SNP Detail
Chr3:20710946 Rr574090 1296 bp distal
SNP A/T A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A T A A A A
rs250643582
MGI SNP Detail
Chr3:20710985 Rr574090 1335 bp distal
SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs263834179
MGI SNP Detail
Chr3:20711026 Rr574090 1376 bp distal
SNP C/T T T T T T T T T T T T T T T T T T T T C T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T
rs232691612
MGI SNP Detail
Chr3:20711087 Rr574090 1437 bp distal
SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs240166006
MGI SNP Detail
Chr3:20711105 Rr574090 1455 bp distal
SNP A/G A A A A A A A A A A A A A A A A A A A G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A
rs51352680
MGI SNP Detail
Chr3:20711348 Rr574090 1698 bp distal
SNP C/T C C C C C C T C C C T C C T C
SNP ID
(GRCm39)
Map Position
(GRCm39)
Gene & Category Variation
Type
Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
129X1/SvJ
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PL/J
PWD/PhJ
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs225492695
MGI SNP Detail
Chr3:20711383 Rr574090 1733 bp distal
SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs48100305
MGI SNP Detail
Chr3:20711410 Rr574090 1760 bp distal
SNP A/C C C C C C C A C C C C C C C
rs30609613
MGI SNP Detail
Chr3:20711469 Rr574090 1819 bp distal
SNP C/T C C T C C T
rs233766645
MGI SNP Detail
Chr3:20711476 Rr574090 1826 bp distal
SNP C/T C C C C C C C C C C C C C C C C C C C C C C T C C C C T C C C C C C C C C C C C T C C C C C C C C C C C C
rs259204488
MGI SNP Detail
Chr3:20711555 Rr574090 1905 bp distal
SNP A/C C C C C C C C C C C C C C C C C C C C A C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C
rs216608543
MGI SNP Detail
Chr3:20711590 Rr574090 1940 bp distal
SNP A/G A A A A A A A A A A A A A A A A A A A G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A
rs239960681
MGI SNP Detail
Chr3:20711609 Rr574090 1959 bp distal
SNP C/G G G G G G G G G G G G G G G G G G G G C G G G G G G G G G G G G G G G G G G G G G G G G G G G G C G G G G
rs250506327
MGI SNP Detail
Chr3:20711635 Rr574090 1985 bp distal
SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
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Showing SNP(s) 1 - 83 of 83

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
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last database update
03/18/2025
MGI 6.24
The Jackson Laboratory