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Mouse SNP Summary
Symbol
Name
ID 		Rr574316
regulatory region 574316
MGI:8036448

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SNP ID
(GRCm39)		 Map Position
(GRCm39)		 Gene & Category Variation
Type		 Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
129X1/SvJ
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PL/J
PWD/PhJ
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs224413572
MGI SNP Detail
Alliance Variant		 Chr3:26382918 Nlgn1 Intron
Rr574316 1959 bp proximal
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C C C C C C C C C
rs248639390
MGI SNP Detail
Alliance Variant		 Chr3:26382977 Nlgn1 Intron
Rr574316 1900 bp proximal
 SNP C/G G G G G G G G G G G G G G G G G G G G G G G C G G G G C G G G G G C G G G G G G C G G G G G G G G G G G G
rs217993599
MGI SNP Detail
Alliance Variant		 Chr3:26383000 Nlgn1 Intron
Rr574316 1877 bp proximal
 SNP G/T G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G T G
rs238611110
MGI SNP Detail
Alliance Variant		 Chr3:26383004 Nlgn1 Intron
Rr574316 1873 bp proximal
 SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs262883366
MGI SNP Detail
Alliance Variant		 Chr3:26383064 Nlgn1 Intron
Rr574316 1813 bp proximal
 SNP G/T G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G T G G G G
rs214785921
MGI SNP Detail
Alliance Variant		 Chr3:26383287 Nlgn1 Intron
Rr574316 1590 bp proximal
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs36436068
MGI SNP Detail
Alliance Variant		 Chr3:26383413 Nlgn1 Intron
Rr574316 1464 bp proximal
 SNP C/T T T T T T T T T T T C T T C T
rs248645501
MGI SNP Detail
Alliance Variant		 Chr3:26383440 Nlgn1 Intron
Rr574316 1437 bp proximal
 SNP A/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T A T T T T
rs217737710
MGI SNP Detail
Alliance Variant		 Chr3:26383455 Nlgn1 Intron
Rr574316 1422 bp proximal
 SNP A/C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C A C C C C
rs37007220
MGI SNP Detail
Alliance Variant		 Chr3:26383470 Nlgn1 Intron
Rr574316 1407 bp proximal
 SNP C/T T T T T T T T T T C T C T
rs580034281
MGI SNP Detail
Alliance Variant		 Chr3:26383648 Nlgn1 Intron
Rr574316 1229 bp proximal
 SNP T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T
rs587482716
MGI SNP Detail
Alliance Variant		 Chr3:26383652 Nlgn1 Intron
Rr574316 1225 bp proximal
 SNP T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T
rs261061061
MGI SNP Detail
Alliance Variant		 Chr3:26383722 Nlgn1 Intron
Rr574316 1155 bp proximal
 SNP A/G A A A A A A A A A A A A A A A A A A A A A A G A A A A G A A A A A G A A A A A A G A A A A A A G A A A A
rs31246266
MGI SNP Detail
Alliance Variant		 Chr3:26383919 Nlgn1 Intron
Rr574316 958 bp proximal
 SNP C/G C G G G C G G G C C G C G C C G C G
rs30013564
MGI SNP Detail
Alliance Variant		 Chr3:26383932 Nlgn1 Intron
Rr574316 945 bp proximal
 SNP C/T C T T C C C
rs265602868
MGI SNP Detail
Alliance Variant		 Chr3:26383999 Nlgn1 Intron
Rr574316 878 bp proximal
 SNP C/G C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C G C C C C
rs226976438
MGI SNP Detail
Alliance Variant		 Chr3:26384021 Nlgn1 Intron
Rr574316 856 bp proximal
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs238939984
MGI SNP Detail
Alliance Variant		 Chr3:26384045 Nlgn1 Intron
Rr574316 832 bp proximal
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs256866372
MGI SNP Detail
Alliance Variant		 Chr3:26384073 Nlgn1 Intron
Rr574316 804 bp proximal
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs224358808
MGI SNP Detail
Alliance Variant		 Chr3:26384095 Nlgn1 Intron
Rr574316 782 bp proximal
 SNP G/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T G T T T T
rs36887793
MGI SNP Detail
Alliance Variant		 Chr3:26384115 Nlgn1 Intron
Rr574316 762 bp proximal
 SNP A/G A A A A A A A A A A G A A G A
rs217770201
MGI SNP Detail
Alliance Variant		 Chr3:26384241 Nlgn1 Intron
Rr574316 636 bp proximal
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs30055744
MGI SNP Detail
Alliance Variant		 Chr3:26384321 Nlgn1 Intron
Rr574316 556 bp proximal
 SNP A/G A G G G A G G A A G A G A A G A G
rs38132307
MGI SNP Detail
Alliance Variant		 Chr3:26384395 Nlgn1 Intron
Rr574316 482 bp proximal
 SNP A/G G G G G G G G G G G A G G A G
rs580861800
MGI SNP Detail
Alliance Variant		 Chr3:26384606 Nlgn1 Intron
Rr574316 271 bp proximal
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
SNP ID
(GRCm39)		 Map Position
(GRCm39)		 Gene & Category Variation
Type		 Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
129X1/SvJ
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PL/J
PWD/PhJ
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs231408681
MGI SNP Detail
Alliance Variant		 Chr3:26384834 Nlgn1 Intron
Rr574316 43 bp proximal
 SNP C/T C C C C C C C C C C C C C C C C C C C T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C
rs31425113
MGI SNP Detail
Alliance Variant		 Chr3:26384965 Nlgn1 Intron
Rr574316 within coordinates of
 SNP A/G G A G G G
rs242733603
MGI SNP Detail
Alliance Variant		 Chr3:26385026 Nlgn1 Intron
Rr574316 within coordinates of
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs30399306
MGI SNP Detail
Alliance Variant		 Chr3:26385068 Nlgn1 Intron
Rr574316 within coordinates of
 SNP C/T C C T T C C C C C C C C C C
rs234908652
MGI SNP Detail
Alliance Variant		 Chr3:26385085 Nlgn1 Intron
Rr574316 within coordinates of
 SNP A/C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C A C
rs263656793
MGI SNP Detail
Alliance Variant		 Chr3:26385118 Nlgn1 Intron
Rr574316 within coordinates of
 SNP A/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T A T
rs37182526
MGI SNP Detail
Alliance Variant		 Chr3:26385183 Nlgn1 mRNA-UTR
Rr574316 within coordinates of
 SNP C/G G G G G G G G G G G C G G C G
rs30452848
MGI SNP Detail
Alliance Variant		 Chr3:26385193 Nlgn1 mRNA-UTR
Rr574316 within coordinates of
Tssr32829 within coordinates of
 SNP C/G C C G G G C G G G C C G C G C C G C G
rs258949309
MGI SNP Detail
Alliance Variant		 Chr3:26385201 Nlgn1 mRNA-UTR
Rr574316 within coordinates of
Tssr32829 within coordinates of
 SNP C/G C C C C C C C C C C C C C C C C C C C G C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C
rs30211307
MGI SNP Detail
Alliance Variant		 Chr3:26385334 A830092H15Rik within coordinates of
Nlgn1 mRNA-UTR
Rr574316 within coordinates of
 SNP A/G G G G G A G G A G G A G G G G G G G
rs38535421
MGI SNP Detail
Alliance Variant		 Chr3:26385486 A830092H15Rik within coordinates of
Cpgi13015 within coordinates of
Nlgn1 Intron
Nlgn1 mRNA-UTR
Rr574316 109 bp distal
Rr574317 within coordinates of
 SNP C/G G G G G G G G G G G G G G G C
rs31198344
MGI SNP Detail
Alliance Variant		 Chr3:26385562 A830092H15Rik within coordinates of
Cpgi13015 within coordinates of
Nlgn1 Intron
Nlgn1 mRNA-UTR
Rr574316 185 bp distal
Rr574317 within coordinates of
 SNP A/G G G A A G G A G G G G G G G G G G
rs37400122
MGI SNP Detail
Alliance Variant		 Chr3:26385651 A830092H15Rik within coordinates of
Cpgi13015 within coordinates of
Nlgn1 Intron
Nlgn1 mRNA-UTR
Rr574316 274 bp distal
Rr574317 within coordinates of
Tssr32830 within coordinates of
 SNP C/G G G G G G G C G G G C G G C G
rs248461836
MGI SNP Detail
Alliance Variant		 Chr3:26385667 A830092H15Rik within coordinates of
Cpgi13015 within coordinates of
Nlgn1 Intron
Nlgn1 mRNA-UTR
Rr574316 290 bp distal
Rr574317 within coordinates of
 SNP C/G C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C G C C C C
rs265964944
MGI SNP Detail
Alliance Variant		 Chr3:26385668 A830092H15Rik within coordinates of
Cpgi13015 within coordinates of
Nlgn1 Intron
Nlgn1 mRNA-UTR
Rr574316 291 bp distal
Rr574317 within coordinates of
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs39719625
MGI SNP Detail
Alliance Variant		 Chr3:26385679 A830092H15Rik within coordinates of
Cpgi13015 within coordinates of
Nlgn1 Intron
Nlgn1 mRNA-UTR
Rr574316 302 bp distal
Rr574317 within coordinates of
 SNP G/T G G G G G G G G G G T G G T G
rs30745460
MGI SNP Detail
Alliance Variant		 Chr3:26385754 A830092H15Rik within coordinates of
Cpgi13015 within coordinates of
Nlgn1 Intron
Nlgn1 mRNA-UTR
Rr574316 377 bp distal
Rr574317 within coordinates of
 SNP C/T C C T T T C T T C C C T T C C C C C T
rs256191476
MGI SNP Detail
Alliance Variant		 Chr3:26385835 A830092H15Rik within coordinates of
Cpgi13015 within coordinates of
Nlgn1 Intron
Nlgn1 mRNA-UTR
Rr574316 458 bp distal
Rr574317 within coordinates of
 SNP A/C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C A C
rs30000993
MGI SNP Detail
Alliance Variant		 Chr3:26385838 A830092H15Rik within coordinates of
Cpgi13015 within coordinates of
Nlgn1 Intron
Nlgn1 mRNA-UTR
Rr574316 461 bp distal
Rr574317 within coordinates of
 SNP C/G C C G G G G G G C C G G G C C G C G
rs243056080
MGI SNP Detail
Alliance Variant		 Chr3:26385841 A830092H15Rik within coordinates of
Cpgi13015 within coordinates of
Nlgn1 Intron
Nlgn1 mRNA-UTR
Rr574316 464 bp distal
Rr574317 within coordinates of
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G A G G G G A G G G G G G G G G G G A G G G G G G G G G G G
rs212084935
MGI SNP Detail
Alliance Variant		 Chr3:26385845 A830092H15Rik within coordinates of
Cpgi13015 within coordinates of
Nlgn1 Intron
Nlgn1 mRNA-UTR
Rr574316 468 bp distal
Rr574317 within coordinates of
 SNP C/G C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C G C C C C C C C C C C C
rs37260085
MGI SNP Detail
Alliance Variant		 Chr3:26385846 A830092H15Rik within coordinates of
Cpgi13015 within coordinates of
Nlgn1 Intron
Nlgn1 mRNA-UTR
Rr574316 469 bp distal
Rr574317 within coordinates of
 SNP A/G G G G G G G A G G G G G G G G
rs31042347
MGI SNP Detail
Alliance Variant		 Chr3:26385888 A830092H15Rik within coordinates of
Cpgi13015 within coordinates of
Nlgn1 Intron
Nlgn1 mRNA-UTR
Rr574316 511 bp distal
Rr574317 within coordinates of
 SNP C/T C C T T T C T T T C C T C T C C T C T
rs36244070
MGI SNP Detail
Alliance Variant		 Chr3:26385891 A830092H15Rik within coordinates of
Cpgi13015 within coordinates of
Nlgn1 Intron
Nlgn1 mRNA-UTR
Rr574316 514 bp distal
Rr574317 within coordinates of
 SNP A/G A A A A A A A A G A G A
rs237667820
MGI SNP Detail
Alliance Variant		 Chr3:26385935 A830092H15Rik within coordinates of
Cpgi13015 within coordinates of
Nlgn1 Intron
Nlgn1 mRNA-UTR
Rr574316 558 bp distal
Rr574317 within coordinates of
 SNP A/T A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A T A A A A
SNP ID
(GRCm39)		 Map Position
(GRCm39)		 Gene & Category Variation
Type		 Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
129X1/SvJ
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PL/J
PWD/PhJ
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs263037714
MGI SNP Detail
Alliance Variant		 Chr3:26385944 A830092H15Rik within coordinates of
Cpgi13015 within coordinates of
Nlgn1 Intron
Nlgn1 mRNA-UTR
Rr574316 567 bp distal
Rr574317 within coordinates of
Rr574318 within coordinates of
 SNP C/G C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C G C C C C
rs582476216
MGI SNP Detail
Alliance Variant		 Chr3:26385961 A830092H15Rik within coordinates of
Cpgi13015 within coordinates of
Nlgn1 Intron
Nlgn1 mRNA-UTR
Rr574316 584 bp distal
Rr574317 within coordinates of
Rr574318 within coordinates of
Tssr32831 within coordinates of
 SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs220547118
MGI SNP Detail
Alliance Variant		 Chr3:26385989 A830092H15Rik within coordinates of
Cpgi13015 within coordinates of
Nlgn1 Intron
Nlgn1 mRNA-UTR
Rr574316 612 bp distal
Rr574317 within coordinates of
Tssr32832 within coordinates of
 SNP A/T T T T T T T T T T T T T T T T T T T T A T T A T T T T A T T T T T A T T T T T T A T T T T T T T T T T T
rs30999578
MGI SNP Detail
Alliance Variant		 Chr3:26385992 A830092H15Rik within coordinates of
Cpgi13015 within coordinates of
Nlgn1 Intron
Nlgn1 mRNA-UTR
Rr574316 615 bp distal
Rr574317 within coordinates of
Tssr32832 within coordinates of
 SNP A/G G A A G G G
rs250823469
MGI SNP Detail
Alliance Variant		 Chr3:26386003 A830092H15Rik within coordinates of
Cpgi13015 within coordinates of
Nlgn1 Intron
Nlgn1 mRNA-UTR
Rr574316 626 bp distal
Rr574317 within coordinates of
Tssr32833 within coordinates of
 SNP C/G C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C G C C C C
rs218513834
MGI SNP Detail
Alliance Variant		 Chr3:26386282 A830092H15Rik within coordinates of
Cpgi13015 within coordinates of
Nlgn1 Intron
Nlgn1 mRNA-UTR
Rr574316 905 bp distal
Rr574317 within coordinates of
 SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs251392625
MGI SNP Detail
Alliance Variant		 Chr3:26386465 A830092H15Rik within coordinates of
Nlgn1 Intron
Nlgn1 mRNA-UTR
Rr574316 1088 bp distal
 SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs581915096
MGI SNP Detail
Alliance Variant		 Chr3:26386566 A830092H15Rik within coordinates of
Nlgn1 Intron
Nlgn1 mRNA-UTR
Rr574316 1189 bp distal
 SNP C/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G C G
rs264067030
MGI SNP Detail
Alliance Variant		 Chr3:26386589 A830092H15Rik within coordinates of
Nlgn1 Intron
Nlgn1 mRNA-UTR
Rr574316 1212 bp distal
 SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs225393015
MGI SNP Detail
Alliance Variant		 Chr3:26386695 A830092H15Rik within coordinates of
Nlgn1 Intron
Nlgn1 mRNA-UTR
Rr574316 1318 bp distal
Rr574320 within coordinates of
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C T C C C C T C C C C C T C C C C C C T C C C C C C C C C C C C
rs585416016
MGI SNP Detail
Alliance Variant		 Chr3:26386708 A830092H15Rik within coordinates of
Nlgn1 Intron
Nlgn1 mRNA-UTR
Rr574316 1331 bp distal
Rr574320 within coordinates of
 SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs30458102
MGI SNP Detail
Alliance Variant		 Chr3:26386711 A830092H15Rik within coordinates of
Nlgn1 Intron
Nlgn1 mRNA-UTR
Rr574316 1334 bp distal
Rr574320 within coordinates of
 SNP C/T C C T T T
rs3698991
MGI SNP Detail
Alliance Variant		 Chr3:26386837 A830092H15Rik within coordinates of
Nlgn1 Intron
Nlgn1 mRNA-UTR
Rr574316 1460 bp distal
Rr574320 within coordinates of
 SNP C/T C C T C C C
rs225139089
MGI SNP Detail
Alliance Variant		 Chr3:26386838 A830092H15Rik within coordinates of
Nlgn1 Intron
Nlgn1 mRNA-UTR
Rr574316 1461 bp distal
Rr574320 within coordinates of
 SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs243002033
MGI SNP Detail
Alliance Variant		 Chr3:26386854 A830092H15Rik within coordinates of
Nlgn1 Intron
Nlgn1 mRNA-UTR
Rr574316 1477 bp distal
Rr574320 within coordinates of
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C
rs253857460
MGI SNP Detail
Alliance Variant		 Chr3:26386957 A830092H15Rik within coordinates of
Nlgn1 mRNA-UTR
Rr574316 1580 bp distal
Rr574320 within coordinates of
 SNP G/T G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G T G G G G
rs233879383
MGI SNP Detail
Alliance Variant		 Chr3:26386968 A830092H15Rik within coordinates of
Nlgn1 mRNA-UTR
Rr574316 1591 bp distal
Rr574320 within coordinates of
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs258811485
MGI SNP Detail
Alliance Variant		 Chr3:26387042 A830092H15Rik within coordinates of
Nlgn1 mRNA-UTR
Rr574316 1665 bp distal
Rr574320 within coordinates of
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs36626767
MGI SNP Detail
Alliance Variant		 Chr3:26387109 A830092H15Rik within coordinates of
Nlgn1 mRNA-UTR
Rr574316 1732 bp distal
 SNP A/G G G G G G G G G G G A G G A G
rs231807965
MGI SNP Detail
Alliance Variant		 Chr3:26387214 A830092H15Rik within coordinates of
Nlgn1 mRNA-UTR
Rr574316 1837 bp distal
 SNP C/T C C C C C C C C C C C C C C C C C C C T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C
rs245531016
MGI SNP Detail
Alliance Variant		 Chr3:26387289 A830092H15Rik within coordinates of
Nlgn1 mRNA-UTR
Rr574316 1912 bp distal
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs213476495
MGI SNP Detail
Alliance Variant		 Chr3:26387291 A830092H15Rik within coordinates of
Nlgn1 mRNA-UTR
Rr574316 1914 bp distal
 SNP G/T G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G T G G G G G G G G G G G G
rs232087291
MGI SNP Detail
Alliance Variant		 Chr3:26387292 A830092H15Rik within coordinates of
Nlgn1 mRNA-UTR
Rr574316 1915 bp distal
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs250763453
MGI SNP Detail
Alliance Variant		 Chr3:26387323 A830092H15Rik within coordinates of
Cpgi13016 within coordinates of
Nlgn1 mRNA-UTR
Rr574316 1946 bp distal
 SNP A/T A A A A A A A A A A A A A A A A A A A A A A T A A A A T A A A A A T A A A A A A T A A A A A A A A A A A A
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Showing SNP(s) 1 - 74 of 74
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
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Send questions and comments to User Support. 		last database update
03/25/2025
MGI 6.24 		The Jackson Laboratory