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Mouse SNP Summary
Symbol
Name
ID 		Rr574362
regulatory region 574362
MGI:8036494

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SNP ID
(GRCm39)		 Map Position
(GRCm39)		 Gene & Category Variation
Type		 Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
129X1/SvJ
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PL/J
PWD/PhJ
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs253961851
MGI SNP Detail
Alliance Variant		 Chr3:27244047 Nceh1 Intron
Nceh1 Noncoding-Transcript-Variant
Rr374718 within coordinates of
Rr574360 within coordinates of
Rr574362 1963 bp proximal
 SNP G/T G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G T G G G G
rs217383585
MGI SNP Detail
Alliance Variant		 Chr3:27244132 Nceh1 Intron
Nceh1 Noncoding-Transcript-Variant
Rr374718 within coordinates of
Rr574360 within coordinates of
Rr574362 1878 bp proximal
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C T C C C C T C C C C C T C C C C C C T C C C C C C C C C C C C
rs226951170
MGI SNP Detail
Alliance Variant		 Chr3:27244155 Nceh1 Intron
Nceh1 Noncoding-Transcript-Variant
Rr374718 within coordinates of
Rr574360 within coordinates of
Rr574362 1855 bp proximal
 SNP C/T C C C T T C C C C C T T C C C C C C C T T T C C C C C C C C C C C C C C C C C T C C C T C C C C C C C C C
rs244494065
MGI SNP Detail
Alliance Variant		 Chr3:27244184 Nceh1 Intron
Nceh1 Noncoding-Transcript-Variant
Rr374718 within coordinates of
Rr574360 within coordinates of
Rr574362 1826 bp proximal
 SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs47841673
MGI SNP Detail
Alliance Variant		 Chr3:27244217 Nceh1 Intron
Nceh1 Noncoding-Transcript-Variant
Rr374718 within coordinates of
Rr574360 within coordinates of
Rr574362 1793 bp proximal
 SNP A/T A A A A A A A A A A T A A T A
rs230727814
MGI SNP Detail
Alliance Variant		 Chr3:27244338 Nceh1 Intron
Nceh1 Noncoding-Transcript-Variant
Rr374718 within coordinates of
Rr574360 within coordinates of
Rr574362 1672 bp proximal
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs46134670
MGI SNP Detail
Alliance Variant		 Chr3:27244387 Nceh1 Intron
Nceh1 Noncoding-Transcript-Variant
Rr374718 within coordinates of
Rr574362 1623 bp proximal
 SNP A/G A A A A A A A A A G A A G A
rs51696669
MGI SNP Detail
Alliance Variant		 Chr3:27244397 Nceh1 Intron
Nceh1 Noncoding-Transcript-Variant
Rr374718 within coordinates of
Rr574362 1613 bp proximal
 SNP C/T T C C T T C C T T T T T C T
rs241698873
MGI SNP Detail
Alliance Variant		 Chr3:27244439 Nceh1 Intron
Nceh1 Noncoding-Transcript-Variant
Rr374718 within coordinates of
Rr574362 1571 bp proximal
 SNP C/T T T T C C T T T T T C C T T T T T T T C C C C T T T T C T T T T T C T T T T T C C T T C T T T T C T T T C
rs217315387
MGI SNP Detail
Alliance Variant		 Chr3:27244470 Nceh1 Intron
Nceh1 Noncoding-Transcript-Variant
Rr374718 within coordinates of
Rr574362 1540 bp proximal
 SNP G G G
rs223955301
MGI SNP Detail
Alliance Variant		 Chr3:27244499 Nceh1 Intron
Nceh1 Noncoding-Transcript-Variant
Rr374718 within coordinates of
Rr574362 1511 bp proximal
 SNP A/T T T T A A T T T T T A T T T T T T T A A A T T T T T T T T T T T T T T T T T A T T T A T T T T T T T T T
rs46617550
MGI SNP Detail
Alliance Variant		 Chr3:27244511 Nceh1 Intron
Nceh1 Noncoding-Transcript-Variant
Rr374718 within coordinates of
Rr574362 1499 bp proximal
 SNP C/T C C C C C C C C C C T C C T C
rs252340526
MGI SNP Detail
Alliance Variant		 Chr3:27244587 Nceh1 Intron
Nceh1 Noncoding-Transcript-Variant
Rr374718 within coordinates of
Rr574362 1423 bp proximal
 SNP G/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T G T T T T
rs219788223
MGI SNP Detail
Alliance Variant		 Chr3:27244653 Nceh1 Intron
Nceh1 Noncoding-Transcript-Variant
Rr374718 within coordinates of
Rr574362 1357 bp proximal
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs30156262
MGI SNP Detail
Alliance Variant		 Chr3:27244783 Nceh1 Intron
Nceh1 Noncoding-Transcript-Variant
Rr374718 within coordinates of
Rr574362 1227 bp proximal
 SNP A/T T A A
rs50253639
MGI SNP Detail
Alliance Variant		 Chr3:27244912 Nceh1 Intron
Nceh1 Noncoding-Transcript-Variant
Rr374718 within coordinates of
Rr574362 1098 bp proximal
 SNP C/G G G G G G G G G G G C G G C G
rs586640785
MGI SNP Detail
Alliance Variant		 Chr3:27244920 Nceh1 Intron
Nceh1 Noncoding-Transcript-Variant
Rr374718 within coordinates of
Rr574362 1090 bp proximal
 SNP G/T G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G T G G G G
rs234183464
MGI SNP Detail
Alliance Variant		 Chr3:27244944 Nceh1 Intron
Nceh1 Noncoding-Transcript-Variant
Rr374718 within coordinates of
Rr574361 within coordinates of
Rr574362 1066 bp proximal
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C T C C C C T C C C C C T C C C C C C T C C C C C C C C C C C C
rs250278569
MGI SNP Detail
Alliance Variant		 Chr3:27244953 Nceh1 Intron
Nceh1 Noncoding-Transcript-Variant
Rr374718 within coordinates of
Rr574361 within coordinates of
Rr574362 1057 bp proximal
 SNP A/G A A A A A A A A A A A A A A A A A A A A A A G A A A A G A A A A A G A A A A A A G A A A A A A A G A A A A
rs263606704
MGI SNP Detail
Alliance Variant		 Chr3:27245005 Nceh1 Intron
Nceh1 Noncoding-Transcript-Variant
Rr374718 within coordinates of
Rr574361 within coordinates of
Rr574362 1005 bp proximal
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C C C C C C C C C
rs51421661
MGI SNP Detail
Alliance Variant		 Chr3:27245010 Nceh1 Intron
Nceh1 Noncoding-Transcript-Variant
Rr374718 within coordinates of
Rr574361 within coordinates of
Rr574362 1000 bp proximal
 SNP C/T T T T T T T T T T T C T T C T
rs244694670
MGI SNP Detail
Alliance Variant		 Chr3:27245011 Nceh1 Intron
Nceh1 Noncoding-Transcript-Variant
Rr374718 within coordinates of
Rr574361 within coordinates of
Rr574362 999 bp proximal
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs255291296
MGI SNP Detail
Alliance Variant		 Chr3:27245013 Nceh1 Intron
Nceh1 Noncoding-Transcript-Variant
Rr374718 within coordinates of
Rr574361 within coordinates of
Rr574362 997 bp proximal
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs224241162
MGI SNP Detail
Alliance Variant		 Chr3:27245014 Nceh1 Intron
Nceh1 Noncoding-Transcript-Variant
Rr374718 within coordinates of
Rr574361 within coordinates of
Rr574362 996 bp proximal
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs46552624
MGI SNP Detail
Alliance Variant		 Chr3:27245068 Nceh1 Intron
Nceh1 Noncoding-Transcript-Variant
Rr374718 within coordinates of
Rr574361 within coordinates of
Rr574362 942 bp proximal
 SNP A/G A A A A A A A A A A G A A A
SNP ID
(GRCm39)		 Map Position
(GRCm39)		 Gene & Category Variation
Type		 Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
129X1/SvJ
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PL/J
PWD/PhJ
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs50214245
MGI SNP Detail
Alliance Variant		 Chr3:27245114 Nceh1 Intron
Nceh1 Noncoding-Transcript-Variant
Rr374718 within coordinates of
Rr574361 within coordinates of
Rr574362 896 bp proximal
 SNP A/C A A A A A A A A A A C A A C A
rs239453596
MGI SNP Detail
Alliance Variant		 Chr3:27245122 Nceh1 Intron
Nceh1 Noncoding-Transcript-Variant
Rr374718 within coordinates of
Rr574361 within coordinates of
Rr574362 888 bp proximal
 SNP A/T A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A T A A A A
rs257911006
MGI SNP Detail
Alliance Variant		 Chr3:27245221 Nceh1 Intron
Nceh1 Noncoding-Transcript-Variant
Rr374718 within coordinates of
Rr574361 within coordinates of
Rr574362 789 bp proximal
 SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs214837612
MGI SNP Detail
Alliance Variant		 Chr3:27245232 Nceh1 Intron
Nceh1 Noncoding-Transcript-Variant
Rr374718 within coordinates of
Rr574361 within coordinates of
Rr574362 778 bp proximal
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs232549525
MGI SNP Detail
Alliance Variant		 Chr3:27245252 Nceh1 Intron
Nceh1 Noncoding-Transcript-Variant
Rr374718 within coordinates of
Rr574361 within coordinates of
Rr574362 758 bp proximal
 SNP A/T A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A T A A A A
rs251028067
MGI SNP Detail
Alliance Variant		 Chr3:27245280 Nceh1 Intron
Nceh1 Noncoding-Transcript-Variant
Rr374718 within coordinates of
Rr574361 within coordinates of
Rr574362 730 bp proximal
 SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs218637531
MGI SNP Detail
Alliance Variant		 Chr3:27245317 Nceh1 Intron
Nceh1 Noncoding-Transcript-Variant
Rr374718 within coordinates of
Rr574361 within coordinates of
Rr574362 693 bp proximal
 SNP C/G C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C G C C C G
rs30155898
MGI SNP Detail
Alliance Variant		 Chr3:27245403 Nceh1 Intron
Nceh1 Noncoding-Transcript-Variant
Rr574362 607 bp proximal
 SNP C/T T C C
rs255720260
MGI SNP Detail
Alliance Variant		 Chr3:27245428 Nceh1 Intron
Nceh1 Noncoding-Transcript-Variant
Rr574362 582 bp proximal
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs227670538
MGI SNP Detail
Alliance Variant		 Chr3:27245533 Nceh1 Intron
Nceh1 Noncoding-Transcript-Variant
Rr574362 477 bp proximal
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs247950998
MGI SNP Detail
Alliance Variant		 Chr3:27245602 Nceh1 Intron
Nceh1 Noncoding-Transcript-Variant
Rr574362 408 bp proximal
 SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs31436237
MGI SNP Detail
Alliance Variant		 Chr3:27245613 Nceh1 Intron
Nceh1 Noncoding-Transcript-Variant
Rr574362 397 bp proximal
 SNP A/G G A A G G A G A G G G A G G A G
rs220810076
MGI SNP Detail
Alliance Variant		 Chr3:27245692 Nceh1 Intron
Nceh1 Noncoding-Transcript-Variant
Rr574362 318 bp proximal
 SNP A/C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C A C C C C
rs238413612
MGI SNP Detail
Alliance Variant		 Chr3:27245698 Nceh1 Intron
Nceh1 Noncoding-Transcript-Variant
Rr574362 312 bp proximal
 SNP C/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G C G G G G
rs30056221
MGI SNP Detail
Alliance Variant		 Chr3:27245730 Nceh1 Intron
Nceh1 Noncoding-Transcript-Variant
Rr574362 280 bp proximal
 SNP C/T C C T C C
rs579528026
MGI SNP Detail
Alliance Variant		 Chr3:27245754 Nceh1 Intron
Nceh1 Noncoding-Transcript-Variant
Rr574362 256 bp proximal
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs224535050
MGI SNP Detail
Alliance Variant		 Chr3:27245817 Nceh1 Intron
Nceh1 Noncoding-Transcript-Variant
Rr574362 193 bp proximal
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs252433767
MGI SNP Detail
Alliance Variant		 Chr3:27245819 Nceh1 Intron
Nceh1 Noncoding-Transcript-Variant
Rr574362 191 bp proximal
 SNP A/T A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A T A A A T
rs264362532
MGI SNP Detail
Alliance Variant		 Chr3:27245830 Nceh1 Intron
Nceh1 Noncoding-Transcript-Variant
Rr574362 180 bp proximal
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs31201534
MGI SNP Detail
Alliance Variant		 Chr3:27245854 Nceh1 Intron
Nceh1 Noncoding-Transcript-Variant
Rr574362 156 bp proximal
 SNP C/T C C T T C C T C T C C C C C C C C
rs253128785
MGI SNP Detail
Alliance Variant		 Chr3:27245940 Nceh1 Intron
Nceh1 Noncoding-Transcript-Variant
Rr574362 70 bp proximal
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs215121947
MGI SNP Detail
Alliance Variant		 Chr3:27245951 Nceh1 Intron
Nceh1 Noncoding-Transcript-Variant
Rr574362 59 bp proximal
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs33860684
MGI SNP Detail
Alliance Variant		 Chr3:27245964 Nceh1 Intron
Nceh1 Noncoding-Transcript-Variant
Rr574362 46 bp proximal
 SNP A/G A A G G A A G A G A A A G A A G A
rs244661170
MGI SNP Detail
Alliance Variant		 Chr3:27245979 Nceh1 Intron
Nceh1 Noncoding-Transcript-Variant
Rr574362 31 bp proximal
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs212656611
MGI SNP Detail
Alliance Variant		 Chr3:27245993 Nceh1 Intron
Nceh1 Noncoding-Transcript-Variant
Rr574362 17 bp proximal
 SNP C/T T T T T T T T T T T T T T T T T T T T T T T C T T T T C T T T T T C T T T T T T C T T T T T T T C T T T C
SNP ID
(GRCm39)		 Map Position
(GRCm39)		 Gene & Category Variation
Type		 Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
129X1/SvJ
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PL/J
PWD/PhJ
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs234436713
MGI SNP Detail
Alliance Variant		 Chr3:27246035 Nceh1 Intron
Nceh1 Noncoding-Transcript-Variant
Rr574362 within coordinates of
 SNP G/T G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G T G G G G
rs261152635
MGI SNP Detail
Alliance Variant		 Chr3:27246050 Nceh1 Intron
Nceh1 Noncoding-Transcript-Variant
Rr574362 within coordinates of
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs6393988
MGI SNP Detail
Alliance Variant		 Chr3:27246110 Nceh1 Intron
Nceh1 Noncoding-Transcript-Variant
Rr574362 within coordinates of
 SNP C/T C T
rs6394016
MGI SNP Detail
Alliance Variant		 Chr3:27246128 Nceh1 Intron
Nceh1 Noncoding-Transcript-Variant
Rr574362 within coordinates of
Tssr32840 within coordinates of
 SNP A/G A G
rs6394026
MGI SNP Detail
Alliance Variant		 Chr3:27246135 Nceh1 Intron
Nceh1 Noncoding-Transcript-Variant
Rr574362 within coordinates of
Tssr32840 within coordinates of
 SNP A/G A G
rs6394447
MGI SNP Detail
Alliance Variant		 Chr3:27246165 Nceh1 Intron
Nceh1 Noncoding-Transcript-Variant
Rr574362 within coordinates of
 SNP C/T C C C C C C C C T C C C T C C T C
rs6394483
MGI SNP Detail
Alliance Variant		 Chr3:27246188 Nceh1 Intron
Nceh1 Noncoding-Transcript-Variant
Rr574362 within coordinates of
 SNP C/T C C C C T C C T C C C C T C C C C C C C
rs255478783
MGI SNP Detail
Alliance Variant		 Chr3:27246287 Nceh1 Intron
Nceh1 Noncoding-Transcript-Variant
Rr574362 within coordinates of
Tssr28610 within coordinates of
 SNP A/T A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A T A A A A
rs218860865
MGI SNP Detail
Alliance Variant		 Chr3:27246305 Nceh1 Intron
Nceh1 Noncoding-Transcript-Variant
Rr574362 within coordinates of
 SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs241387582
MGI SNP Detail
Alliance Variant		 Chr3:27246334 Nceh1 Intron
Nceh1 Noncoding-Transcript-Variant
Rr574362 within coordinates of
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs266114099
MGI SNP Detail
Alliance Variant		 Chr3:27246336 Nceh1 Intron
Nceh1 Noncoding-Transcript-Variant
Rr574362 within coordinates of
 SNP A/C A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A C A A A A
rs233016715
MGI SNP Detail
Alliance Variant		 Chr3:27246426 Nceh1 Intron
Nceh1 Noncoding-Transcript-Variant
Rr574362 84 bp distal
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs6408685
MGI SNP Detail
Alliance Variant		 Chr3:27246454 Nceh1 Intron
Nceh1 Noncoding-Transcript-Variant
Rr574362 112 bp distal
 SNP A/T A A A A A A A A T A A A T A A T A
rs259071934
MGI SNP Detail
Alliance Variant		 Chr3:27246468 Nceh1 Intron
Nceh1 Noncoding-Transcript-Variant
Rr574362 126 bp distal
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs226496387
MGI SNP Detail
Alliance Variant		 Chr3:27246476 Nceh1 Intron
Nceh1 Noncoding-Transcript-Variant
Rr574362 134 bp distal
 SNP G/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T G T T T T
rs6408761
MGI SNP Detail
Alliance Variant		 Chr3:27246493 Nceh1 Intron
Nceh1 Noncoding-Transcript-Variant
Rr574362 151 bp distal
 SNP C/T T T T T T T T T C T T T C T T C T
rs212543321
MGI SNP Detail
Alliance Variant		 Chr3:27246571 Nceh1 Intron
Nceh1 Noncoding-Transcript-Variant
Rr574362 229 bp distal
 SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs227900585
MGI SNP Detail
Alliance Variant		 Chr3:27246685 Nceh1 Intron
Nceh1 Noncoding-Transcript-Variant
Rr574362 343 bp distal
 SNP C/G C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C G C C C C
rs254476643
MGI SNP Detail
Alliance Variant		 Chr3:27246719 Nceh1 Intron
Nceh1 Noncoding-Transcript-Variant
Rr574362 377 bp distal
 SNP G/T G G G G G G G G G G G G G G G G G G G G G G T G G G G T G G G G G T G G G G G G T G G G G G G G G G G G G
rs217789740
MGI SNP Detail
Alliance Variant		 Chr3:27246731 Nceh1 Intron
Nceh1 Noncoding-Transcript-Variant
Rr574362 389 bp distal
 SNP C/T T T T T T T T T T T T T T T T T T T T T T T C T T T T C T T T T T C T T T T T T C T T T T T T T T T T T T
rs239798016
MGI SNP Detail
Alliance Variant		 Chr3:27246751 Nceh1 Intron
Nceh1 Noncoding-Transcript-Variant
Rr574362 409 bp distal
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G A G G G G A G G G G G A G G G G G G A G G G G G G G A G G G G
rs46815222
MGI SNP Detail
Alliance Variant		 Chr3:27246768 Nceh1 Intron
Nceh1 Noncoding-Transcript-Variant
Rr574362 426 bp distal
 SNP C/T T C
rs215578534
MGI SNP Detail
Alliance Variant		 Chr3:27246772 Nceh1 Intron
Nceh1 Noncoding-Transcript-Variant
Rr574362 430 bp distal
 SNP C/T T T T T T T T T T T T T T T T T T T T T T T C T T T T C T T T T C T T T T T T C T T T T T T T C T T T T
rs232463877
MGI SNP Detail
Alliance Variant		 Chr3:27246777 Nceh1 Intron
Nceh1 Noncoding-Transcript-Variant
Rr574362 435 bp distal
 SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs249801256
MGI SNP Detail
Alliance Variant		 Chr3:27246783 Nceh1 Intron
Nceh1 Noncoding-Transcript-Variant
Rr574362 441 bp distal
 SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
SNP ID
(GRCm39)		 Map Position
(GRCm39)		 Gene & Category Variation
Type		 Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
129X1/SvJ
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PL/J
PWD/PhJ
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs221631809
MGI SNP Detail
Alliance Variant		 Chr3:27246818 Nceh1 Intron
Nceh1 Noncoding-Transcript-Variant
Rr574362 476 bp distal
 SNP A/G A A A A A A A A A A A A A A A A A A A A A A G A A A A G A A A A A G A A A A A A G A A A A A A A G A A A A
rs244069438
MGI SNP Detail
Alliance Variant		 Chr3:27246849 Nceh1 Intron
Nceh1 Noncoding-Transcript-Variant
Rr574362 507 bp distal
 SNP A/C A A A A A A A A A A A A A A A A A A A A A A C A A A A C A A A A A C A A A A A A C A A A A A A A A A A A A
rs49888511
MGI SNP Detail
Alliance Variant		 Chr3:27246852 Nceh1 Intron
Nceh1 Noncoding-Transcript-Variant
Rr574362 510 bp distal
 SNP A/G A A G G A A G G A A A G A A G A
rs49823270
MGI SNP Detail
Alliance Variant		 Chr3:27246892 Nceh1 Intron
Nceh1 Noncoding-Transcript-Variant
Rr574362 550 bp distal
 SNP A/T A T T A A T T A A A A A A A A
rs51424254
MGI SNP Detail
Alliance Variant		 Chr3:27246912 Nceh1 Intron
Nceh1 Noncoding-Transcript-Variant
Rr574362 570 bp distal
 SNP C/G C C C C C C C C C C G C C G C
rs46154462
MGI SNP Detail
Alliance Variant		 Chr3:27246951 Nceh1 Intron
Nceh1 Noncoding-Transcript-Variant
Rr574362 609 bp distal
 SNP T T
rs48548985
MGI SNP Detail
Alliance Variant		 Chr3:27246988 Nceh1 Intron
Nceh1 Noncoding-Transcript-Variant
Rr574362 646 bp distal
 SNP G G
rs48313848
MGI SNP Detail
Alliance Variant		 Chr3:27247044 Nceh1 Intron
Nceh1 Noncoding-Transcript-Variant
Rr574362 702 bp distal
 SNP A A
rs46579173
MGI SNP Detail
Alliance Variant		 Chr3:27247047 Nceh1 Intron
Nceh1 Noncoding-Transcript-Variant
Rr574362 705 bp distal
 SNP A A
rs585444551
MGI SNP Detail
Alliance Variant		 Chr3:27247048 Nceh1 Intron
Nceh1 Noncoding-Transcript-Variant
Rr574362 706 bp distal
 SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs227296614
MGI SNP Detail
Alliance Variant		 Chr3:27247086 Nceh1 Intron
Nceh1 Noncoding-Transcript-Variant
Rr574362 744 bp distal
 SNP G/T G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G T G G G G
rs46238422
MGI SNP Detail
Alliance Variant		 Chr3:27247093 Nceh1 Intron
Nceh1 Noncoding-Transcript-Variant
Rr574362 751 bp distal
 SNP C C
rs217692557
MGI SNP Detail
Alliance Variant		 Chr3:27247162 Nceh1 Intron
Nceh1 Noncoding-Transcript-Variant
Rr574362 820 bp distal
 SNP C/T T T T T T T T T T T T T T T T T T T T T T T C T T T T C T T T T T C T T T T T T C T T T T T T T T T T T T
rs232797151
MGI SNP Detail
Alliance Variant		 Chr3:27247215 Nceh1 Intron
Nceh1 Noncoding-Transcript-Variant
Rr574362 873 bp distal
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs48948108
MGI SNP Detail
Alliance Variant		 Chr3:27247267 Nceh1 Intron
Nceh1 Noncoding-Transcript-Variant
Rr574362 925 bp distal
 SNP A/G G G G G G G G G G G A G G A G
rs215430447
MGI SNP Detail
Alliance Variant		 Chr3:27247268 Nceh1 Intron
Nceh1 Noncoding-Transcript-Variant
Rr574362 926 bp distal
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs232501874
MGI SNP Detail
Alliance Variant		 Chr3:27247290 Nceh1 Intron
Nceh1 Noncoding-Transcript-Variant
Rr574362 948 bp distal
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs250094654
MGI SNP Detail
Alliance Variant		 Chr3:27247419 Nceh1 Intron
Nceh1 Noncoding-Transcript-Variant
Rr574362 1077 bp distal
 SNP C/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G C G G G G
rs213675209
MGI SNP Detail
Alliance Variant		 Chr3:27247445 Nceh1 Intron
Nceh1 Noncoding-Transcript-Variant
Rr574362 1103 bp distal
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs234754952
MGI SNP Detail
Alliance Variant		 Chr3:27247446 Nceh1 Intron
Nceh1 Noncoding-Transcript-Variant
Rr574362 1104 bp distal
 SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs264236789
MGI SNP Detail
Alliance Variant		 Chr3:27247464 Nceh1 Intron
Nceh1 Noncoding-Transcript-Variant
Rr574362 1122 bp distal
 SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs46651652
MGI SNP Detail
Alliance Variant		 Chr3:27247471 Nceh1 Intron
Nceh1 Noncoding-Transcript-Variant
Rr574362 1129 bp distal
 SNP C/T C T T C C T T C C C C C C C C
rs241418430
MGI SNP Detail
Alliance Variant		 Chr3:27247475 Nceh1 Intron
Nceh1 Noncoding-Transcript-Variant
Rr574362 1133 bp distal
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs252725261
MGI SNP Detail
Alliance Variant		 Chr3:27247486 Nceh1 Intron
Nceh1 Noncoding-Transcript-Variant
Rr574362 1144 bp distal
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs220152390
MGI SNP Detail
Alliance Variant		 Chr3:27247500 Nceh1 Intron
Nceh1 Noncoding-Transcript-Variant
Rr574362 1158 bp distal
 SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
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Showing SNP(s) 1 - 100 of 125
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
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Send questions and comments to User Support. 		last database update
03/18/2025
MGI 6.24 		The Jackson Laboratory
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