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Mouse SNP Summary
Symbol
Name
ID
Rr574373
regulatory region 574373
MGI:8036505

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SNP ID
(GRCm39)
Map Position
(GRCm39)
Gene & Category Variation
Type
Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
129X1/SvJ
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PL/J
PWD/PhJ
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs244319529
MGI SNP Detail
Alliance Variant
Chr3:27281327 Nceh1 Intron
Nceh1 Noncoding-Transcript-Variant
Rr574373 1903 bp proximal
SNP C/T C C C C C C C C C C C C C C C C C C C C C C T C C C C C C C C C C C C C C C C C T C C C C C C C C C C C C
rs261199413
MGI SNP Detail
Alliance Variant
Chr3:27281386 Nceh1 Intron
Nceh1 Noncoding-Transcript-Variant
Rr574373 1844 bp proximal
SNP A/G A A A A A A A A A A A A A A A A A A A A A A G A A A A G A A A A A G A A A A A A G A A A A A A A A A A A A
rs223062716
MGI SNP Detail
Alliance Variant
Chr3:27281417 Nceh1 Intron
Nceh1 Noncoding-Transcript-Variant
Rr574373 1813 bp proximal
SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs241375953
MGI SNP Detail
Alliance Variant
Chr3:27281437 Nceh1 Intron
Nceh1 Noncoding-Transcript-Variant
Rr574373 1793 bp proximal
SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs49243605
MGI SNP Detail
Alliance Variant
Chr3:27281442 Nceh1 Intron
Nceh1 Noncoding-Transcript-Variant
Rr574373 1788 bp proximal
Tssr28616 within coordinates of
SNP A/G G G G G G G G G G G A G G G
rs259173315
MGI SNP Detail
Alliance Variant
Chr3:27281522 Nceh1 Intron
Nceh1 Noncoding-Transcript-Variant
Rr574373 1708 bp proximal
SNP A/T T T T T T T T T T T T T T T T T T T T T T T A T T T T A T T T T T A T T T T T T A T T T T T T T A T T T T
rs226590085
MGI SNP Detail
Alliance Variant
Chr3:27281540 Nceh1 Intron
Nceh1 Noncoding-Transcript-Variant
Rr574373 1690 bp proximal
SNP A/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T A T T T T
rs239101182
MGI SNP Detail
Alliance Variant
Chr3:27281551 Nceh1 Intron
Nceh1 Noncoding-Transcript-Variant
Rr574373 1679 bp proximal
SNP C/T C C C C C C C C C C C C C C C C C C C C C C T C C C C T C C C C C T C C C C C C T C C C C C C C T C C C C
rs264898654
MGI SNP Detail
Alliance Variant
Chr3:27281564 Nceh1 Intron
Nceh1 Noncoding-Transcript-Variant
Rr574373 1666 bp proximal
SNP C/T T T T T T T T T T T T T T T T T T T T T T T C T T T T C T T T T T C T T T T T T C T T T T T T T C T T T T
rs227543931
MGI SNP Detail
Alliance Variant
Chr3:27281565 Nceh1 Intron
Nceh1 Noncoding-Transcript-Variant
Rr574373 1665 bp proximal
SNP A/G G G G G G G G G G G G G G G G G G G G G G G A G G G G A G G G G G A G G G G G G A G G G G G G G G G G G G
rs259993036
MGI SNP Detail
Alliance Variant
Chr3:27281669 Nceh1 Intron
Nceh1 Noncoding-Transcript-Variant
Rr574373 1561 bp proximal
SNP C/T T T T T T T T T T T T T T T T T T T T T T T C T T T T C T T T T T C T T T T T T C T T T T T T T C T T T T
rs218045216
MGI SNP Detail
Alliance Variant
Chr3:27281684 Nceh1 Intron
Nceh1 Noncoding-Transcript-Variant
Rr574373 1546 bp proximal
SNP A/C C C C C C C C C C C C C C C C C C C C C C C A C C C C C C C C C C C C C C C A C C C C C C C C C C C C
rs52206237
MGI SNP Detail
Alliance Variant
Chr3:27281729 Nceh1 Intron
Nceh1 Noncoding-Transcript-Variant
Rr574373 1501 bp proximal
SNP A/T T T T T T T T T T T A T T A T
rs245206380
MGI SNP Detail
Alliance Variant
Chr3:27281782 Nceh1 Intron
Nceh1 Noncoding-Transcript-Variant
Rr574373 1448 bp proximal
SNP A/C C C C C C C C C C C C C C C C C C C C C C C A C C C C A C C C C C A C C C C C C A C C C C C C C A C C C C
rs214087918
MGI SNP Detail
Alliance Variant
Chr3:27281787 Nceh1 Intron
Nceh1 Noncoding-Transcript-Variant
Rr574373 1443 bp proximal
SNP A/C C C C C C C C C C C C C C C C C C C C C C C A C C C C A C C C C C A C C C C C C A C C C C C C C A C C C C
rs231106352
MGI SNP Detail
Alliance Variant
Chr3:27281816 Nceh1 Intron
Nceh1 Noncoding-Transcript-Variant
Rr574373 1414 bp proximal
SNP A/C C C C C C C C C C C C C C C C C C C C C C C A C C C C A C C C C C A C C C C C C A C C C C C C C A C C C C
rs256065458
MGI SNP Detail
Alliance Variant
Chr3:27281840 Nceh1 Intron
Nceh1 Noncoding-Transcript-Variant
Rr574372 within coordinates of
Rr574373 1390 bp proximal
SNP C/G C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C G C C C C
rs211895504
MGI SNP Detail
Alliance Variant
Chr3:27281842 Nceh1 Intron
Nceh1 Noncoding-Transcript-Variant
Rr574372 within coordinates of
Rr574373 1388 bp proximal
SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs234995797
MGI SNP Detail
Alliance Variant
Chr3:27281868 Nceh1 Intron
Nceh1 Noncoding-Transcript-Variant
Rr574372 within coordinates of
Rr574373 1362 bp proximal
SNP G/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T G T T T T
rs264365943
MGI SNP Detail
Alliance Variant
Chr3:27281878 Nceh1 Intron
Nceh1 Noncoding-Transcript-Variant
Rr574372 within coordinates of
Rr574373 1352 bp proximal
SNP A/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T A T T T T
rs222921254
MGI SNP Detail
Alliance Variant
Chr3:27281918 Nceh1 Intron
Nceh1 Noncoding-Transcript-Variant
Rr574372 within coordinates of
Rr574373 1312 bp proximal
SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs241609646
MGI SNP Detail
Alliance Variant
Chr3:27281924 Nceh1 Intron
Nceh1 Noncoding-Transcript-Variant
Rr574372 within coordinates of
Rr574373 1306 bp proximal
SNP A/G G G G G G G G G G G G G G G G G G G G G G G A G G G G A G G G G G A G G G G G G A G G G G G G G G G G G G
rs253198794
MGI SNP Detail
Alliance Variant
Chr3:27281935 Nceh1 Intron
Nceh1 Noncoding-Transcript-Variant
Rr574372 within coordinates of
Rr574373 1295 bp proximal
SNP A/T T T T T T T T T T T T T T T T T T T T T T T A T T T T A T T T T T A T T T T T T A T T T T T T T T T T T T
rs220362225
MGI SNP Detail
Alliance Variant
Chr3:27281967 Nceh1 Intron
Nceh1 Noncoding-Transcript-Variant
Rr574372 within coordinates of
Rr574373 1263 bp proximal
SNP C/T T T T T T T T T T T T T T T T T T T T T T T C T T T T C T T T T T C T T T T T T C T T T T T T T T T T T T
rs246027199
MGI SNP Detail
Alliance Variant
Chr3:27281980 Nceh1 Intron
Nceh1 Noncoding-Transcript-Variant
Rr574372 within coordinates of
Rr574373 1250 bp proximal
SNP A/G G G G G G G G G G G G G G G G G G G G G G G A G G G G A G G G G G A G G G G G G A G G G G G G G A G G G G
SNP ID
(GRCm39)
Map Position
(GRCm39)
Gene & Category Variation
Type
Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
129X1/SvJ
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PL/J
PWD/PhJ
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs31479616
MGI SNP Detail
Alliance Variant
Chr3:27282016 Nceh1 Intron
Nceh1 Noncoding-Transcript-Variant
Rr574372 within coordinates of
Rr574373 1214 bp proximal
SNP G/T T T G T T
rs220312888
MGI SNP Detail
Alliance Variant
Chr3:27282079 Nceh1 Intron
Nceh1 Noncoding-Transcript-Variant
Rr574372 within coordinates of
Rr574373 1151 bp proximal
SNP A/C A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A C A A A A
rs248242368
MGI SNP Detail
Alliance Variant
Chr3:27282090 Nceh1 Intron
Nceh1 Noncoding-Transcript-Variant
Rr574372 within coordinates of
Rr574373 1140 bp proximal
SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs580021068
MGI SNP Detail
Alliance Variant
Chr3:27282114 Nceh1 Intron
Nceh1 Noncoding-Transcript-Variant
Rr574372 within coordinates of
Rr574373 1116 bp proximal
SNP A/T A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A T A A A A
rs258855956
MGI SNP Detail
Alliance Variant
Chr3:27282149 Nceh1 Intron
Nceh1 Noncoding-Transcript-Variant
Rr574372 within coordinates of
Rr574373 1081 bp proximal
SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs227406061
MGI SNP Detail
Alliance Variant
Chr3:27282197 Nceh1 Intron
Nceh1 Noncoding-Transcript-Variant
Rr574372 within coordinates of
Rr574373 1033 bp proximal
SNP G/T G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G T G G G G
rs245260648
MGI SNP Detail
Alliance Variant
Chr3:27282222 Nceh1 Intron
Nceh1 Noncoding-Transcript-Variant
Rr574372 within coordinates of
Rr574373 1008 bp proximal
SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs49870609
MGI SNP Detail
Alliance Variant
Chr3:27282270 Nceh1 Intron
Nceh1 Noncoding-Transcript-Variant
Rr574372 within coordinates of
Rr574373 960 bp proximal
SNP A/T A A A A A A A A A A T A A A
rs256240103
MGI SNP Detail
Alliance Variant
Chr3:27282274 Nceh1 Intron
Nceh1 Noncoding-Transcript-Variant
Rr574372 within coordinates of
Rr574373 956 bp proximal
SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs224966156
MGI SNP Detail
Alliance Variant
Chr3:27282294 Nceh1 Intron
Nceh1 Noncoding-Transcript-Variant
Rr574372 within coordinates of
Rr574373 936 bp proximal
SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs253579031
MGI SNP Detail
Alliance Variant
Chr3:27282313 Nceh1 Intron
Nceh1 Noncoding-Transcript-Variant
Rr574372 within coordinates of
Rr574373 917 bp proximal
SNP C/T T T T T T T T T T T T T T T T T T T T T T T C T T T T C T T T T T C T T T T T T C T T T T T T T C T T T T
rs46312217
MGI SNP Detail
Alliance Variant
Chr3:27282383 Nceh1 Intron
Nceh1 Noncoding-Transcript-Variant
Rr574372 within coordinates of
Rr574373 847 bp proximal
SNP C/T C T C
rs242804600
MGI SNP Detail
Alliance Variant
Chr3:27282392 Nceh1 Intron
Nceh1 Noncoding-Transcript-Variant
Rr574372 within coordinates of
Rr574373 838 bp proximal
SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs253681539
MGI SNP Detail
Alliance Variant
Chr3:27282427 Nceh1 Intron
Nceh1 Noncoding-Transcript-Variant
Rr574372 within coordinates of
Rr574373 803 bp proximal
SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs216950651
MGI SNP Detail
Alliance Variant
Chr3:27282477 Nceh1 Intron
Nceh1 Noncoding-Transcript-Variant
Rr574372 within coordinates of
Rr574373 753 bp proximal
SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs235035134
MGI SNP Detail
Alliance Variant
Chr3:27282517 Nceh1 Intron
Nceh1 Noncoding-Transcript-Variant
Rr574372 within coordinates of
Rr574373 713 bp proximal
SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs51824782
MGI SNP Detail
Alliance Variant
Chr3:27282603 Nceh1 Intron
Nceh1 Noncoding-Transcript-Variant
Rr574372 within coordinates of
Rr574373 627 bp proximal
SNP C/T C T
rs51007390
MGI SNP Detail
Alliance Variant
Chr3:27282604 Nceh1 Intron
Nceh1 Noncoding-Transcript-Variant
Rr574372 within coordinates of
Rr574373 626 bp proximal
SNP A/G G G A A G G A A G G G G G G G
rs220459598
MGI SNP Detail
Alliance Variant
Chr3:27282637 Nceh1 Intron
Nceh1 Noncoding-Transcript-Variant
Rr574372 within coordinates of
Rr574373 593 bp proximal
SNP G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G
rs251622148
MGI SNP Detail
Alliance Variant
Chr3:27282657 Nceh1 Intron
Nceh1 Noncoding-Transcript-Variant
Rr574372 within coordinates of
Rr574373 573 bp proximal
SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T
rs47864927
MGI SNP Detail
Alliance Variant
Chr3:27282685 Nceh1 Intron
Nceh1 Noncoding-Transcript-Variant
Rr574372 within coordinates of
Rr574373 545 bp proximal
SNP C/T C C T T C C T T C C C C C C C C
rs239087263
MGI SNP Detail
Alliance Variant
Chr3:27282738 Nceh1 Intron
Nceh1 Noncoding-Transcript-Variant
Rr574372 within coordinates of
Rr574373 492 bp proximal
SNP G/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T G T T T T
rs50744512
MGI SNP Detail
Alliance Variant
Chr3:27282801 Nceh1 Intron
Nceh1 Noncoding-Transcript-Variant
Rr574372 within coordinates of
Rr574373 429 bp proximal
SNP A/G A G A
rs48551814
MGI SNP Detail
Alliance Variant
Chr3:27282809 Nceh1 Intron
Nceh1 Noncoding-Transcript-Variant
Rr574372 within coordinates of
Rr574373 421 bp proximal
SNP C/T T C
rs50477665
MGI SNP Detail
Alliance Variant
Chr3:27282821 Nceh1 Intron
Nceh1 Noncoding-Transcript-Variant
Rr574372 within coordinates of
Rr574373 409 bp proximal
SNP A/C A A C A A C C A A A A A A C A
SNP ID
(GRCm39)
Map Position
(GRCm39)
Gene & Category Variation
Type
Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
129X1/SvJ
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PL/J
PWD/PhJ
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs45821301
MGI SNP Detail
Alliance Variant
Chr3:27282899 Nceh1 Intron
Nceh1 Noncoding-Transcript-Variant
Rr574372 within coordinates of
Rr574373 331 bp proximal
SNP C/T T T C C T T C T T T T T T T T
rs264490804
MGI SNP Detail
Alliance Variant
Chr3:27282910 Nceh1 Intron
Nceh1 Noncoding-Transcript-Variant
Rr574372 within coordinates of
Rr574373 320 bp proximal
SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs233534314
MGI SNP Detail
Alliance Variant
Chr3:27282967 Nceh1 Intron
Nceh1 Noncoding-Transcript-Variant
Rr574372 within coordinates of
Rr574373 263 bp proximal
SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs258976056
MGI SNP Detail
Alliance Variant
Chr3:27283031 Nceh1 Intron
Nceh1 Noncoding-Transcript-Variant
Rr574372 within coordinates of
Rr574373 199 bp proximal
SNP A/G G G G G G G G G G G G G G G G G G G G G G G A G G G G A G G G G G A G G G G G G A G G G G G G G A G G G G
rs48818159
MGI SNP Detail
Alliance Variant
Chr3:27283032 Nceh1 Intron
Nceh1 Noncoding-Transcript-Variant
Rr574372 within coordinates of
Rr574373 198 bp proximal
SNP C/T C C T T C C T T C C C C C C C C
rs235103857
MGI SNP Detail
Alliance Variant
Chr3:27283077 Nceh1 Intron
Nceh1 Noncoding-Transcript-Variant
Rr574372 within coordinates of
Rr574373 153 bp proximal
SNP C/T C C C C C C C C C C C C C C C C C C C C C C T C C C C C C C C C C C C C C C C C T C C C C C C C C C C C C
rs246764318
MGI SNP Detail
Alliance Variant
Chr3:27283095 Nceh1 Intron
Nceh1 Noncoding-Transcript-Variant
Rr574372 within coordinates of
Rr574373 135 bp proximal
SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs214798995
MGI SNP Detail
Alliance Variant
Chr3:27283098 Nceh1 Intron
Nceh1 Noncoding-Transcript-Variant
Rr574372 within coordinates of
Rr574373 132 bp proximal
SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G A
rs51257301
MGI SNP Detail
Alliance Variant
Chr3:27283131 Nceh1 Intron
Nceh1 Noncoding-Transcript-Variant
Rr574372 within coordinates of
Rr574373 99 bp proximal
SNP A/T A A T T A A T T A A A A A A A
rs256616698
MGI SNP Detail
Alliance Variant
Chr3:27283233 Nceh1 Intron
Nceh1 Noncoding-Transcript-Variant
Rr574372 within coordinates of
Rr574373 within coordinates of
SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs45725221
MGI SNP Detail
Alliance Variant
Chr3:27283257 Nceh1 Intron
Nceh1 Noncoding-Transcript-Variant
Rr574372 within coordinates of
Rr574373 6 bp distal
Rr574374 within coordinates of
SNP A/C A A A C A A A A C A A A A A C
rs240353485
MGI SNP Detail
Alliance Variant
Chr3:27283356 Nceh1 Intron
Nceh1 Noncoding-Transcript-Variant
Rr574373 105 bp distal
SNP C/T C C C C C C C C C C C C C C C C C C C C C C T C C C C T C C C C C T C C C C C C T C C C C C C C C C C C C
rs252773709
MGI SNP Detail
Alliance Variant
Chr3:27283361 Nceh1 Intron
Nceh1 Noncoding-Transcript-Variant
Rr574373 110 bp distal
SNP A/G G G G G G G G G G G G G G G G G G G G G G G A G G G G A G G G G G A G G G G G G A G G G G G G G G G G G G
rs221539251
MGI SNP Detail
Alliance Variant
Chr3:27283452 Nceh1 Intron
Nceh1 Noncoding-Transcript-Variant
Rr574373 201 bp distal
SNP A/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T A T T T T
rs239143161
MGI SNP Detail
Alliance Variant
Chr3:27283462 Nceh1 Intron
Nceh1 Noncoding-Transcript-Variant
Rr574373 211 bp distal
SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C T
rs250379187
MGI SNP Detail
Alliance Variant
Chr3:27283485 Nceh1 Intron
Nceh1 Noncoding-Transcript-Variant
Rr574373 234 bp distal
SNP C/T C C C C C C C C C C C C C C C C C C C C C C T C C C C T C C C C C T C C C C C C T C C C C C C C C C C C C
rs222396026
MGI SNP Detail
Alliance Variant
Chr3:27283517 Nceh1 Intron
Nceh1 Noncoding-Transcript-Variant
Rr574373 266 bp distal
SNP C/T C C C C C C C C C C C C C C C C C C C C C C T C C C C C C C C C C C C C C C C C T C C C C C C C C C C C C
rs245020619
MGI SNP Detail
Alliance Variant
Chr3:27283556 Nceh1 Intron
Nceh1 Noncoding-Transcript-Variant
Rr574373 305 bp distal
SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T C
rs30154280
MGI SNP Detail
Alliance Variant
Chr3:27283560 Nceh1 Intron
Nceh1 Noncoding-Transcript-Variant
Rr574373 309 bp distal
SNP C/T C T T C C T C T C C C T C C T C
rs234632466
MGI SNP Detail
Alliance Variant
Chr3:27283635 Nceh1 Intron
Nceh1 Noncoding-Transcript-Variant
Rr574373 384 bp distal
SNP G/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T G T T T T
rs241678210
MGI SNP Detail
Alliance Variant
Chr3:27283765 Nceh1 Intron
Nceh1 Noncoding-Transcript-Variant
Rr574373 514 bp distal
SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A G
rs259734151
MGI SNP Detail
Alliance Variant
Chr3:27283853 Nceh1 Intron
Nceh1 Noncoding-Transcript-Variant
Rr574373 602 bp distal
SNP C/T C C C C C C C C C C C C C C C C C C C C C C T C C C C T C C C C C T C C C C C C T C C C C C C C C C C C C
rs227126646
MGI SNP Detail
Alliance Variant
Chr3:27283868 Nceh1 Intron
Nceh1 Noncoding-Transcript-Variant
Rr574373 617 bp distal
SNP A/T A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A T A A A T
rs245492214
MGI SNP Detail
Alliance Variant
Chr3:27283881 Nceh1 Intron
Nceh1 Noncoding-Transcript-Variant
Rr574373 630 bp distal
SNP G/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T G T T T T
rs215501463
MGI SNP Detail
Alliance Variant
Chr3:27283917 Nceh1 Intron
Nceh1 Noncoding-Transcript-Variant
Rr574373 666 bp distal
SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
SNP ID
(GRCm39)
Map Position
(GRCm39)
Gene & Category Variation
Type
Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
129X1/SvJ
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PL/J
PWD/PhJ
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs585326320
MGI SNP Detail
Alliance Variant
Chr3:27283946 Nceh1 Intron
Nceh1 Noncoding-Transcript-Variant
Rr574373 695 bp distal
SNP A/G A A A A A A A A A A A A A A A A A A A A A A G A A A A G A A A A A G A A A A A A G A A A A A A A A A A A G
rs230298741
MGI SNP Detail
Alliance Variant
Chr3:27283986 Nceh1 Intron
Nceh1 Noncoding-Transcript-Variant
Rr574373 735 bp distal
SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G A
rs254697498
MGI SNP Detail
Alliance Variant
Chr3:27283998 Nceh1 Intron
Nceh1 Noncoding-Transcript-Variant
Rr574373 747 bp distal
SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs212381274
MGI SNP Detail
Alliance Variant
Chr3:27284069 Nceh1 Intron
Nceh1 Noncoding-Transcript-Variant
Rr574373 818 bp distal
SNP A/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T A T T T T
rs243175810
MGI SNP Detail
Alliance Variant
Chr3:27284072 Nceh1 Intron
Nceh1 Noncoding-Transcript-Variant
Rr574373 821 bp distal
SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs252679457
MGI SNP Detail
Alliance Variant
Chr3:27284121 Nceh1 Intron
Nceh1 Noncoding-Transcript-Variant
Rr574373 870 bp distal
SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A G
rs215959030
MGI SNP Detail
Alliance Variant
Chr3:27284158 Nceh1 Intron
Nceh1 Noncoding-Transcript-Variant
Rr574373 907 bp distal
SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs31744398
MGI SNP Detail
Alliance Variant
Chr3:27284160 Nceh1 Intron
Nceh1 Noncoding-Transcript-Variant
Rr574373 909 bp distal
SNP G/T G T T
rs250619531
MGI SNP Detail
Alliance Variant
Chr3:27284221 Nceh1 Intron
Nceh1 Noncoding-Transcript-Variant
Rr574373 970 bp distal
SNP A/C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C A C C C C
rs221975641
MGI SNP Detail
Alliance Variant
Chr3:27284345 Nceh1 Intron
Nceh1 Noncoding-Transcript-Variant
Rr574373 1094 bp distal
SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs583005143
MGI SNP Detail
Alliance Variant
Chr3:27284398 Nceh1 Intron
Nceh1 Noncoding-Transcript-Variant
Rr574373 1147 bp distal
SNP A/G G G G G G G G G G G G G G G G G G G G G G G A G G G G A G G G G G A G G G G G G A G G G G G G G G G G G G
rs242026722
MGI SNP Detail
Alliance Variant
Chr3:27284400 Nceh1 Intron
Nceh1 Noncoding-Transcript-Variant
Rr574373 1149 bp distal
SNP C/T C C C C C C C C C C C C C C C C C C C C C C T C C C C C C C C C C C C C C C C C T C C C C C C C C C C C C
rs586743293
MGI SNP Detail
Alliance Variant
Chr3:27284401 Nceh1 Intron
Nceh1 Noncoding-Transcript-Variant
Rr574373 1150 bp distal
SNP C/T C C C C C C C C C C C C C C C C C C C C C C T C C C C T C C C C C T C C C C C C T C C C C C C C C C C C C
rs260893565
MGI SNP Detail
Alliance Variant
Chr3:27284402 Nceh1 Intron
Nceh1 Noncoding-Transcript-Variant
Rr574373 1151 bp distal
SNP A/G A A A A A A A A A A A A A A A A A A A A A A G A A A A G A A A A A G A A A A A A G A A A A A A A G A A A A
rs579672854
MGI SNP Detail
Alliance Variant
Chr3:27284425 Nceh1 Intron
Nceh1 Noncoding-Transcript-Variant
Rr574373 1174 bp distal
SNP G/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T G T T T T T T T T T T T T T T T T T
rs241747367
MGI SNP Detail
Alliance Variant
Chr3:27284516 Nceh1 Intron
Nceh1 Noncoding-Transcript-Variant
Rr574373 1265 bp distal
SNP A/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T A T T T T
rs49332682
MGI SNP Detail
Alliance Variant
Chr3:27284555 Nceh1 Intron
Nceh1 Noncoding-Transcript-Variant
Rr574373 1304 bp distal
SNP C/T C C C C C C C C C C T C C C
rs226998874
MGI SNP Detail
Alliance Variant
Chr3:27284634 Nceh1 Intron
Nceh1 Noncoding-Transcript-Variant
Rr574373 1383 bp distal
SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs583722484
MGI SNP Detail
Alliance Variant
Chr3:27284675 Nceh1 Intron
Nceh1 Noncoding-Transcript-Variant
Rr574373 1424 bp distal
SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs239506982
MGI SNP Detail
Alliance Variant
Chr3:27284695 Nceh1 Intron
Nceh1 Noncoding-Transcript-Variant
Rr574373 1444 bp distal
SNP C/T C C C C C C C C C C C C C C C C C C C C C C T C C C C C C C C C C C C C C C C C T C C C C C C C C C C C C
rs262238224
MGI SNP Detail
Alliance Variant
Chr3:27284762 Nceh1 Intron
Nceh1 Noncoding-Transcript-Variant
Rr574373 1511 bp distal
SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs46589992
MGI SNP Detail
Alliance Variant
Chr3:27284781 Nceh1 Intron
Nceh1 Noncoding-Transcript-Variant
Rr574373 1530 bp distal
SNP A/T T T T T T T T T T T A T T A T
rs30253956
MGI SNP Detail
Alliance Variant
Chr3:27284804 Nceh1 Intron
Nceh1 Noncoding-Transcript-Variant
Rr574373 1553 bp distal
SNP C/T T T C C T T C T C T T T C T T C T
rs250143107
MGI SNP Detail
Alliance Variant
Chr3:27284805 Nceh1 Intron
Nceh1 Noncoding-Transcript-Variant
Rr574373 1554 bp distal
SNP A/G G G G G G G G G G G G G G G G G G G G G G G A G G G G G G G G G G G G G G G G G A G G G G G G G G G G G G
rs30699984
MGI SNP Detail
Alliance Variant
Chr3:27284843 Nceh1 Intron
Nceh1 Noncoding-Transcript-Variant
Rr574373 1592 bp distal
SNP A/G A A G G A A G A G A A A A A A A A
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Showing SNP(s) 1 - 100 of 114

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last database update
03/25/2025
MGI 6.24
The Jackson Laboratory

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