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Mouse SNP Summary
Symbol
Name
ID
Rr574377
regulatory region 574377
MGI:8036509

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SNP ID
(GRCm39)
Map Position
(GRCm39)
Gene & Category Variation
Type
Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
129X1/SvJ
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PL/J
PWD/PhJ
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs228230687
MGI SNP Detail
Alliance Variant
Chr3:27289560 Nceh1 Intron
Nceh1 Noncoding-Transcript-Variant
Rr574377 1991 bp proximal
SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs257777390
MGI SNP Detail
Alliance Variant
Chr3:27289571 Nceh1 Intron
Nceh1 Noncoding-Transcript-Variant
Rr574377 1980 bp proximal
SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs215167011
MGI SNP Detail
Alliance Variant
Chr3:27289572 Nceh1 Intron
Nceh1 Noncoding-Transcript-Variant
Rr574377 1979 bp proximal
SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs238228210
MGI SNP Detail
Alliance Variant
Chr3:27289589 Nceh1 Intron
Nceh1 Noncoding-Transcript-Variant
Rr574377 1962 bp proximal
SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs256346710
MGI SNP Detail
Alliance Variant
Chr3:27289592 Nceh1 Intron
Nceh1 Noncoding-Transcript-Variant
Rr574377 1959 bp proximal
SNP C/T C C C C C C C C C C C C C C C C C C C C C C T C C C C T C C C C C T C C C C C C T C C C C C C C T C C C T
rs579341505
MGI SNP Detail
Alliance Variant
Chr3:27289648 Nceh1 Intron
Nceh1 Noncoding-Transcript-Variant
Rr574377 1903 bp proximal
SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T
rs31644308
MGI SNP Detail
Alliance Variant
Chr3:27289687 Nceh1 Intron
Nceh1 Noncoding-Transcript-Variant
Rr574377 1864 bp proximal
SNP A A A
rs51012588
MGI SNP Detail
Alliance Variant
Chr3:27289817 Nceh1 Intron
Nceh1 Noncoding-Transcript-Variant
Rr574377 1734 bp proximal
SNP C/T C C C C C C C C C C T C C T C
rs235351414
MGI SNP Detail
Alliance Variant
Chr3:27289840 Nceh1 Intron
Nceh1 Noncoding-Transcript-Variant
Rr574377 1711 bp proximal
SNP C/G G G G G G G G G G G G G G G G G G G G G G G C G G G G C G G G G G C G G G G G G C G G G G G G G C G G G
rs252732593
MGI SNP Detail
Alliance Variant
Chr3:27289841 Nceh1 Intron
Nceh1 Noncoding-Transcript-Variant
Rr574377 1710 bp proximal
SNP A/G G G G G G G G G G G G G G G G G G G G G G G A G G G G A G G G G G A G G G G G G A G G G G G G G G G G G
rs221364807
MGI SNP Detail
Alliance Variant
Chr3:27289858 Nceh1 Intron
Nceh1 Noncoding-Transcript-Variant
Rr574377 1693 bp proximal
SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs49951361
MGI SNP Detail
Alliance Variant
Chr3:27289911 Nceh1 Intron
Nceh1 Noncoding-Transcript-Variant
Rr574377 1640 bp proximal
SNP G/T T T T T T T T T T T G T T T
rs582224402
MGI SNP Detail
Alliance Variant
Chr3:27289916 Nceh1 Intron
Nceh1 Noncoding-Transcript-Variant
Rr574377 1635 bp proximal
SNP A/T A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A T A A A A
rs245029355
MGI SNP Detail
Alliance Variant
Chr3:27289926 Nceh1 Intron
Nceh1 Noncoding-Transcript-Variant
Rr574377 1625 bp proximal
SNP A/G A A A A A A A A A A A A A A A A A A A A A A G A A A A G A A A A A G A A A A A A G A A A A A A A G A A A G
rs262461553
MGI SNP Detail
Alliance Variant
Chr3:27289979 Nceh1 Intron
Nceh1 Noncoding-Transcript-Variant
Rr574377 1572 bp proximal
SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs222539298
MGI SNP Detail
Alliance Variant
Chr3:27289987 Nceh1 Intron
Nceh1 Noncoding-Transcript-Variant
Rr574377 1564 bp proximal
SNP C/T C C C C C C C C C C C C C C C C C C C C C C T C C C C T C C C C C T C C C C C C T C C C C C C C C C C C T
rs244953264
MGI SNP Detail
Alliance Variant
Chr3:27289989 Nceh1 Intron
Nceh1 Noncoding-Transcript-Variant
Rr574377 1562 bp proximal
SNP A/G A A A A A A A A A A A A A A A A A A A A A A G A A A A G A A A A A G A A A A A A G A A A A A A A G A A A G
rs50306759
MGI SNP Detail
Alliance Variant
Chr3:27290029 Nceh1 Intron
Nceh1 Noncoding-Transcript-Variant
Rr574377 1522 bp proximal
SNP G/T T T T T T T T T T T G T T G T
rs48608109
MGI SNP Detail
Alliance Variant
Chr3:27290061 Nceh1 Intron
Nceh1 Noncoding-Transcript-Variant
Rr574377 1490 bp proximal
SNP C/T T T T T T T T T T T C T T C T
rs47550336
MGI SNP Detail
Alliance Variant
Chr3:27290135 Nceh1 Intron
Nceh1 Noncoding-Transcript-Variant
Rr574377 1416 bp proximal
SNP C/G C C C C C C C C C C G C C G C
rs259666028
MGI SNP Detail
Alliance Variant
Chr3:27290161 Nceh1 Intron
Nceh1 Noncoding-Transcript-Variant
Rr574377 1390 bp proximal
SNP C/G C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C G C C C C
rs48602547
MGI SNP Detail
Alliance Variant
Chr3:27290203 Nceh1 Intron
Nceh1 Noncoding-Transcript-Variant
Rr574377 1348 bp proximal
SNP A/C A A A A A A A A A A C A A C A
rs252556050
MGI SNP Detail
Alliance Variant
Chr3:27290228 Nceh1 Intron
Nceh1 Noncoding-Transcript-Variant
Rr574377 1323 bp proximal
SNP A/G/T A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A T A A A A A A A A A A A A G A A A
rs265402134
MGI SNP Detail
Alliance Variant
Chr3:27290324 Nceh1 Intron
Nceh1 Noncoding-Transcript-Variant
Rr574377 1227 bp proximal
SNP A/G G G G G G G G G G G G G G G G G G G G G G G A G G G G A G G G G G A G G G G G G A G G G G G G G G G G G A
rs230500612
MGI SNP Detail
Alliance Variant
Chr3:27290343 Nceh1 Intron
Nceh1 Noncoding-Transcript-Variant
Rr574377 1208 bp proximal
SNP C/G C C C C C C C C C C C C C C C C C C C C C C G C C C C G C C C C C G C C C C C C G C C C C C C C G C C C G
SNP ID
(GRCm39)
Map Position
(GRCm39)
Gene & Category Variation
Type
Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
129X1/SvJ
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PL/J
PWD/PhJ
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs31280447
MGI SNP Detail
Alliance Variant
Chr3:27290387 Nceh1 Intron
Nceh1 Noncoding-Transcript-Variant
Rr574377 1164 bp proximal
SNP C/T T C C T T C
rs212176963
MGI SNP Detail
Alliance Variant
Chr3:27290390 Nceh1 Intron
Nceh1 Noncoding-Transcript-Variant
Rr574377 1161 bp proximal
SNP A/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T A T T T T
rs235229908
MGI SNP Detail
Alliance Variant
Chr3:27290405 Nceh1 Intron
Nceh1 Noncoding-Transcript-Variant
Rr574377 1146 bp proximal
SNP A/C A A A A A A A A A A A A A A A A A A A A A A C A A A A C A A A A A C A A A A A A C A A A A A A A C A A A C
rs246888096
MGI SNP Detail
Alliance Variant
Chr3:27290408 Nceh1 Intron
Nceh1 Noncoding-Transcript-Variant
Rr574377 1143 bp proximal
SNP G/T G G G G G G G G G G G G G G G G G G G G G G T G G G G T G G G G G T G G G G G G T G G G G G G G G G G G G
rs216086515
MGI SNP Detail
Alliance Variant
Chr3:27290467 Nceh1 Intron
Nceh1 Noncoding-Transcript-Variant
Rr574377 1084 bp proximal
SNP A/G A A A A A A A A A A A A A A A A A A A A A A G A A A A G A A A A A G A A A A A A G A A A A A A A G A A A G
rs239866571
MGI SNP Detail
Alliance Variant
Chr3:27290548 Nceh1 Intron
Nceh1 Noncoding-Transcript-Variant
Rr574377 1003 bp proximal
SNP A/G/T A A A A A A A A A A A A A A A A A A A A A G A A A A G A A A A A G A A A A A A G A A A A A A A T A A A G
rs257749275
MGI SNP Detail
Alliance Variant
Chr3:27290549 Nceh1 Intron
Nceh1 Noncoding-Transcript-Variant
Rr574377 1002 bp proximal
SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T T C T T T T T T T T T T T T T T C T T T T
rs221890738
MGI SNP Detail
Alliance Variant
Chr3:27290584 Nceh1 Intron
Nceh1 Noncoding-Transcript-Variant
Rr574377 967 bp proximal
SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs235449818
MGI SNP Detail
Alliance Variant
Chr3:27290588 Nceh1 Intron
Nceh1 Noncoding-Transcript-Variant
Rr574377 963 bp proximal
SNP C/T C C C C C C C C C C C C C C C C C C C C C C T C C C C T C C C C C T C C C C C C T C C C C C C C T C C C T
rs249548890
MGI SNP Detail
Alliance Variant
Chr3:27290596 Nceh1 Intron
Nceh1 Noncoding-Transcript-Variant
Rr574377 955 bp proximal
SNP A/G A A A A A A A A A A A A A A A A A A A A A A G A A A A G A A A A A G A A A A A A G A A A A A A A A A A A G
rs223196184
MGI SNP Detail
Alliance Variant
Chr3:27290600 Nceh1 Intron
Nceh1 Noncoding-Transcript-Variant
Rr574377 951 bp proximal
SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs241678298
MGI SNP Detail
Alliance Variant
Chr3:27290605 Nceh1 Intron
Nceh1 Noncoding-Transcript-Variant
Rr574377 946 bp proximal
SNP C/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G C G G G G
rs259739074
MGI SNP Detail
Alliance Variant
Chr3:27290606 Nceh1 Intron
Nceh1 Noncoding-Transcript-Variant
Rr574377 945 bp proximal
SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs49166492
MGI SNP Detail
Alliance Variant
Chr3:27290616 Nceh1 Intron
Nceh1 Noncoding-Transcript-Variant
Rr574377 935 bp proximal
SNP A/G G G G G G G G G G G A G G A G
rs246562384
MGI SNP Detail
Alliance Variant
Chr3:27290803 Nceh1 Intron
Nceh1 Noncoding-Transcript-Variant
Rr574377 748 bp proximal
SNP G/T G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G T G G G G
rs262914841
MGI SNP Detail
Alliance Variant
Chr3:27290807 Nceh1 Intron
Nceh1 Noncoding-Transcript-Variant
Rr574377 744 bp proximal
SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs230509197
MGI SNP Detail
Alliance Variant
Chr3:27290809 Nceh1 Intron
Nceh1 Noncoding-Transcript-Variant
Rr574377 742 bp proximal
SNP G/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T G T T T T
rs243442978
MGI SNP Detail
Alliance Variant
Chr3:27290862 Nceh1 Intron
Nceh1 Noncoding-Transcript-Variant
Rr574377 689 bp proximal
SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs254233815
MGI SNP Detail
Alliance Variant
Chr3:27290882 Nceh1 Intron
Nceh1 Noncoding-Transcript-Variant
Rr574377 669 bp proximal
SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs229338427
MGI SNP Detail
Alliance Variant
Chr3:27290964 Nceh1 Intron
Nceh1 Noncoding-Transcript-Variant
Rr574377 587 bp proximal
SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs246758579
MGI SNP Detail
Alliance Variant
Chr3:27290981 Nceh1 Intron
Nceh1 Noncoding-Transcript-Variant
Rr574377 570 bp proximal
SNP C/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G C G G G G
rs217214226
MGI SNP Detail
Alliance Variant
Chr3:27290986 Nceh1 Intron
Nceh1 Noncoding-Transcript-Variant
Rr574377 565 bp proximal
SNP G/T G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G T G G G G
rs49408542
MGI SNP Detail
Alliance Variant
Chr3:27291076 Nceh1 Intron
Nceh1 Noncoding-Transcript-Variant
Rr574377 475 bp proximal
SNP A/T A A A A A A A A A A T A A T A
rs585969720
MGI SNP Detail
Alliance Variant
Chr3:27291131 Nceh1 Intron
Nceh1 Noncoding-Transcript-Variant
Rr574377 420 bp proximal
SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs256461664
MGI SNP Detail
Alliance Variant
Chr3:27291149 Nceh1 Intron
Nceh1 Noncoding-Transcript-Variant
Rr574377 402 bp proximal
SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
SNP ID
(GRCm39)
Map Position
(GRCm39)
Gene & Category Variation
Type
Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
129X1/SvJ
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PL/J
PWD/PhJ
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs213633846
MGI SNP Detail
Alliance Variant
Chr3:27291168 Nceh1 Intron
Nceh1 Noncoding-Transcript-Variant
Rr574377 383 bp proximal
SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs237087612
MGI SNP Detail
Alliance Variant
Chr3:27291223 Nceh1 Intron
Nceh1 Noncoding-Transcript-Variant
Rr574377 328 bp proximal
SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs249612292
MGI SNP Detail
Alliance Variant
Chr3:27291248 Nceh1 Intron
Nceh1 Noncoding-Transcript-Variant
Rr574377 303 bp proximal
SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs223442514
MGI SNP Detail
Alliance Variant
Chr3:27291252 Nceh1 Intron
Nceh1 Noncoding-Transcript-Variant
Rr574377 299 bp proximal
SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs235301170
MGI SNP Detail
Alliance Variant
Chr3:27291309 Nceh1 Intron
Nceh1 Noncoding-Transcript-Variant
Rr574377 242 bp proximal
SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs253321720
MGI SNP Detail
Alliance Variant
Chr3:27291363 Nceh1 Intron
Nceh1 Noncoding-Transcript-Variant
Rr574377 188 bp proximal
SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs223704256
MGI SNP Detail
Alliance Variant
Chr3:27291373 Nceh1 Intron
Nceh1 Noncoding-Transcript-Variant
Rr574377 178 bp proximal
SNP A/C A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A C A A A A
rs243882078
MGI SNP Detail
Alliance Variant
Chr3:27291389 Nceh1 Intron
Nceh1 Noncoding-Transcript-Variant
Rr574377 162 bp proximal
SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs261867247
MGI SNP Detail
Alliance Variant
Chr3:27291395 Nceh1 Intron
Nceh1 Noncoding-Transcript-Variant
Rr574377 156 bp proximal
SNP A/G/T G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G T G G G A
rs222866963
MGI SNP Detail
Alliance Variant
Chr3:27291409 Nceh1 Intron
Nceh1 Noncoding-Transcript-Variant
Rr574377 142 bp proximal
SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs579538845
MGI SNP Detail
Alliance Variant
Chr3:27291469 Nceh1 Intron
Nceh1 Noncoding-Transcript-Variant
Rr397624 within coordinates of
Rr574376 within coordinates of
Rr574377 82 bp proximal
SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs46644702
MGI SNP Detail
Alliance Variant
Chr3:27291509 Nceh1 Intron
Nceh1 Noncoding-Transcript-Variant
Rr397624 within coordinates of
Rr574376 within coordinates of
Rr574377 42 bp proximal
SNP A/G A A A A A A A A A A G A A G A
rs46929238
MGI SNP Detail
Alliance Variant
Chr3:27291576 Nceh1 Intron
Nceh1 Noncoding-Transcript-Variant
Rr397624 within coordinates of
Rr574376 within coordinates of
Rr574377 4 bp distal
SNP A/G A A A A A A A A A A G A A G A
rs229570016
MGI SNP Detail
Alliance Variant
Chr3:27291610 Nceh1 Intron
Nceh1 Noncoding-Transcript-Variant
Rr397624 within coordinates of
Rr574376 within coordinates of
Rr574377 38 bp distal
SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs583153576
MGI SNP Detail
Alliance Variant
Chr3:27291635 Nceh1 Intron
Nceh1 Noncoding-Transcript-Variant
Rr397624 within coordinates of
Rr574376 within coordinates of
Rr574377 63 bp distal
SNP G/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T G T T T T
rs241127469
MGI SNP Detail
Alliance Variant
Chr3:27291666 Nceh1 Intron
Nceh1 Noncoding-Transcript-Variant
Rr397624 within coordinates of
Rr574376 within coordinates of
Rr574377 94 bp distal
SNP A/G G G G G G G G G G G G G G G G G G G G G G G A G G G G A G G G G G A G G G G G G A G G G G G G G G G G G G
rs49376072
MGI SNP Detail
Alliance Variant
Chr3:27291878 Nceh1 Intron
Nceh1 Noncoding-Transcript-Variant
Rr574377 306 bp distal
SNP A/G G G G G G G G G G G A G G A G
rs232177810
MGI SNP Detail
Alliance Variant
Chr3:27291895 Nceh1 Intron
Nceh1 Noncoding-Transcript-Variant
Rr574377 323 bp distal
SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs251710904
MGI SNP Detail
Alliance Variant
Chr3:27291930 Nceh1 Intron
Nceh1 Noncoding-Transcript-Variant
Rr574377 358 bp distal
SNP A/G G G G G G G G G G G G G G G G G G G G G G G A G G G G A G G G G G A G G G G G G A G G G G G G G A G G G G
rs51887160
MGI SNP Detail
Alliance Variant
Chr3:27291949 Nceh1 Intron
Nceh1 Noncoding-Transcript-Variant
Rr574377 377 bp distal
SNP C/T C C C C C C C C C C T C C T C
rs49476051
MGI SNP Detail
Alliance Variant
Chr3:27292075 Nceh1 Intron
Nceh1 Noncoding-Transcript-Variant
Rr574377 503 bp distal
SNP A/T A A A A A A A A A A T A A T A
rs580455214
MGI SNP Detail
Alliance Variant
Chr3:27292131 Nceh1 Intron
Nceh1 Noncoding-Transcript-Variant
Rr574377 559 bp distal
SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs243404935
MGI SNP Detail
Alliance Variant
Chr3:27292151 Nceh1 Intron
Nceh1 Noncoding-Transcript-Variant
Rr574377 579 bp distal
SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs48677099
MGI SNP Detail
Alliance Variant
Chr3:27292176 Nceh1 Intron
Nceh1 Noncoding-Transcript-Variant
Rr574377 604 bp distal
SNP A/G G G G G G G G G G G A G G A G
rs48757126
MGI SNP Detail
Alliance Variant
Chr3:27292217 Nceh1 Intron
Nceh1 Noncoding-Transcript-Variant
Rr574377 645 bp distal
SNP A/G A A A A A A A A A A G A A G A
SNP ID
(GRCm39)
Map Position
(GRCm39)
Gene & Category Variation
Type
Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
129X1/SvJ
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PL/J
PWD/PhJ
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs263322780
MGI SNP Detail
Alliance Variant
Chr3:27292314 Nceh1 Intron
Nceh1 Noncoding-Transcript-Variant
Rr574377 742 bp distal
SNP G/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T G T T T T
rs215317140
MGI SNP Detail
Alliance Variant
Chr3:27292332 Nceh1 Intron
Nceh1 Noncoding-Transcript-Variant
Rr574377 760 bp distal
SNP C/T C C C C C C C C C C C C C C C C C C C C C C T C C C C T C C C C C T C C C C C C T C C C C C C C C C C C C
rs50442943
MGI SNP Detail
Alliance Variant
Chr3:27292361 Nceh1 Intron
Nceh1 Noncoding-Transcript-Variant
Rr574377 789 bp distal
SNP A/G G G G G G G G G G G A G G A G
rs256893849
MGI SNP Detail
Alliance Variant
Chr3:27292385 Nceh1 Intron
Nceh1 Noncoding-Transcript-Variant
Rr574377 813 bp distal
SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs46278317
MGI SNP Detail
Alliance Variant
Chr3:27292429 Nceh1 Intron
Nceh1 Noncoding-Transcript-Variant
Rr574377 857 bp distal
SNP A/G A A A A A A A A A A G A A G A
rs235646707
MGI SNP Detail
Alliance Variant
Chr3:27292471 Nceh1 Intron
Nceh1 Noncoding-Transcript-Variant
Rr574377 899 bp distal
SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs47127463
MGI SNP Detail
Alliance Variant
Chr3:27292485 Nceh1 Intron
Nceh1 Noncoding-Transcript-Variant
Rr574377 913 bp distal
SNP C/G C C C C C C C C C C G C C G C
rs222949895
MGI SNP Detail
Alliance Variant
Chr3:27292501 Nceh1 Intron
Nceh1 Noncoding-Transcript-Variant
Rr574377 929 bp distal
SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs241180025
MGI SNP Detail
Alliance Variant
Chr3:27292575 Nceh1 Intron
Nceh1 Noncoding-Transcript-Variant
Rr574377 1003 bp distal
SNP A/G A A A A A A A A A A A A A A A A A A A A A A G A A A A G A A A A A G A A A A A A G A A A A A A A G A A A A
rs265807050
MGI SNP Detail
Alliance Variant
Chr3:27292588 Nceh1 Intron
Nceh1 Noncoding-Transcript-Variant
Rr574377 1016 bp distal
SNP A/T A A A A A A A A A A A A A A A A A A A A A A T A A A A T A A A A A T A A A A A A T A A A A A A A A A A A A
rs231747629
MGI SNP Detail
Alliance Variant
Chr3:27292624 Nceh1 Intron
Nceh1 Noncoding-Transcript-Variant
Rr574377 1052 bp distal
SNP A/C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C A C C C C
rs246954050
MGI SNP Detail
Alliance Variant
Chr3:27292627 Nceh1 Intron
Nceh1 Noncoding-Transcript-Variant
Rr574377 1055 bp distal
SNP A/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T A T T T T
rs243647131
MGI SNP Detail
Alliance Variant
Chr3:27292731 Nceh1 Intron
Nceh1 Noncoding-Transcript-Variant
Rr574377 1159 bp distal
SNP C/T C C C C C C C C C C C C C C C C C C C C C C T C C C C T C C C C C T C C C C C C T C C C C C C C C C C C C
rs217315011
MGI SNP Detail
Alliance Variant
Chr3:27292778 Nceh1 Intron
Nceh1 Noncoding-Transcript-Variant
Rr574377 1206 bp distal
SNP A/C A A A A A A A A A A A A A A A A A A A A A A C A A A A C A A A A A C A A A A A A C A A A A A A A A A A A A
rs228456553
MGI SNP Detail
Alliance Variant
Chr3:27292805 Nceh1 Intron
Nceh1 Noncoding-Transcript-Variant
Rr574377 1233 bp distal
SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs253178842
MGI SNP Detail
Alliance Variant
Chr3:27292848 Nceh1 Intron
Nceh1 Noncoding-Transcript-Variant
Rr574377 1276 bp distal
SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs216121770
MGI SNP Detail
Alliance Variant
Chr3:27292873 Nceh1 Intron
Nceh1 Noncoding-Transcript-Variant
Rr574377 1301 bp distal
SNP C/T C C C C C C C C C C C C C C C C C C C C C C T C C C C T C C C C C T C C C C C C T C C C C C C C C C C C C
rs236712783
MGI SNP Detail
Alliance Variant
Chr3:27292886 Nceh1 Intron
Nceh1 Noncoding-Transcript-Variant
Rr574377 1314 bp distal
SNP C/G C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C G C C C C
rs261834494
MGI SNP Detail
Alliance Variant
Chr3:27292919 Nceh1 Intron
Nceh1 Noncoding-Transcript-Variant
Rr574377 1347 bp distal
SNP C/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G C G G G G
rs212511721
MGI SNP Detail
Alliance Variant
Chr3:27292929 Nceh1 Intron
Nceh1 Noncoding-Transcript-Variant
Rr574377 1357 bp distal
SNP A/G A A A A A A A A A A A A A A A A A A A A A A G A A A A G A A A A A G A A A A A A G A A A A A A A A A A A A
rs229771610
MGI SNP Detail
Alliance Variant
Chr3:27292930 Nceh1 Intron
Nceh1 Noncoding-Transcript-Variant
Rr574377 1358 bp distal
SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs252988789
MGI SNP Detail
Alliance Variant
Chr3:27292976 Nceh1 Intron
Nceh1 Noncoding-Transcript-Variant
Rr574377 1404 bp distal
SNP G/T T T T T T T T T T T T T T T T T T T T T T T G T T T T G T T T T T G T T T T T T G T T T T T T T G T T T G
rs223017347
MGI SNP Detail
Alliance Variant
Chr3:27292995 Nceh1 Intron
Nceh1 Noncoding-Transcript-Variant
Rr574377 1423 bp distal
SNP C/T C C C C C C C C C C C C C C C C C C C C C C T C C C C T C C C C C T C C C C C C T C C C C C C C C C C C C
rs242383452
MGI SNP Detail
Alliance Variant
Chr3:27293012 Nceh1 Intron
Nceh1 Noncoding-Transcript-Variant
Rr574377 1440 bp distal
SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs587207817
MGI SNP Detail
Alliance Variant
Chr3:27293032 Nceh1 Intron
Nceh1 Noncoding-Transcript-Variant
Rr574377 1460 bp distal
SNP A/C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C A C C C C
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Showing SNP(s) 1 - 100 of 121

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
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last database update
03/18/2025
MGI 6.24
The Jackson Laboratory