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Mouse SNP Summary
Symbol
Name
ID 		Rr574555
regulatory region 574555
MGI:8036687

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SNP ID
(GRCm39)		 Map Position
(GRCm39)		 Gene & Category Variation
Type		 Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
129X1/SvJ
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PL/J
PWD/PhJ
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs215110025
MGI SNP Detail		 Chr3:28314876 Gm54170 within coordinates of
Gm56802 within coordinates of
Rr574555 1998 bp proximal
 SNP C/T T T T T T T T T T T T T T T T T T T T T T T C T T T T C T T T T T T T T T T T T C T T T T T T T T T T T T
rs236678129
MGI SNP Detail		 Chr3:28314882 Gm54170 within coordinates of
Gm56802 within coordinates of
Rr574555 1992 bp proximal
 SNP A/T A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A T A A A A
rs585182073
MGI SNP Detail		 Chr3:28315025 Gm54170 within coordinates of
Gm56802 within coordinates of
Rr574555 1849 bp proximal
 SNP A/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T A T T T T
rs30112473
MGI SNP Detail		 Chr3:28315046 Gm54170 within coordinates of
Gm56802 within coordinates of
Rr574555 1828 bp proximal
 SNP A/C C A A A C
rs29641223
MGI SNP Detail		 Chr3:28315108 Gm54170 within coordinates of
Gm56802 within coordinates of
Rr574555 1766 bp proximal
 SNP G/T T T T T T T T T T G T T G T
rs29642146
MGI SNP Detail		 Chr3:28315162 Gm54170 within coordinates of
Gm56802 within coordinates of
Rr574555 1712 bp proximal
 SNP A/T A A T A A A T T T T T T A T A A A A
rs252975801
MGI SNP Detail		 Chr3:28315175 Gm54170 within coordinates of
Gm56802 within coordinates of
Rr574555 1699 bp proximal
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G G G G G G G G G A G G G G G G G G G G G G
rs220541233
MGI SNP Detail		 Chr3:28315326 Gm54170 within coordinates of
Gm56802 within coordinates of
Rr574555 1548 bp proximal
 SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T T T T T T T T T
rs580429005
MGI SNP Detail		 Chr3:28315363 Gm54170 within coordinates of
Gm56802 within coordinates of
Rr574555 1511 bp proximal
 SNP G/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T G T T T T
rs29642149
MGI SNP Detail		 Chr3:28315377 Gm54170 within coordinates of
Gm56802 within coordinates of
Rr574555 1497 bp proximal
 SNP A/G A A A A A A A A A A A A A G A
rs261930119
MGI SNP Detail		 Chr3:28315420 Gm54170 within coordinates of
Gm56802 within coordinates of
Rr574555 1454 bp proximal
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C T C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs223264253
MGI SNP Detail		 Chr3:28315436 Gm54170 within coordinates of
Gm56802 within coordinates of
Rr574555 1438 bp proximal
 SNP A/C C C C C C C C C C C C C C C C C C C C C C C C C C C C A C C C C C C C C C C C C A C C C C C C C C C C C C
rs243928086
MGI SNP Detail		 Chr3:28315448 Gm54170 within coordinates of
Gm56802 within coordinates of
Rr574555 1426 bp proximal
 SNP C/G G G G G G G G G G G G G G G G G G G G G G G C G G G G G G G G G G G G G G G G G G G G G G G G G C G G G G
rs29642152
MGI SNP Detail		 Chr3:28315497 Gm54170 within coordinates of
Gm56802 within coordinates of
Rr574555 1377 bp proximal
 SNP A/T T T T T T T T T T T A T T T
rs228558414
MGI SNP Detail		 Chr3:28315511 Gm54170 within coordinates of
Gm56802 within coordinates of
Rr574555 1363 bp proximal
 SNP G/T G G G G G G G G G G G G G G G G G G G G G G T G G G G T G G G G G G G G G G G G T G G G G G G G T G G G G
rs242827905
MGI SNP Detail		 Chr3:28315519 Gm54170 within coordinates of
Gm56802 within coordinates of
Rr574555 1355 bp proximal
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C T C C C C T C C C C C C C C C C C C T C C C C C C C T C C C C
rs584115384
MGI SNP Detail		 Chr3:28315597 Gm54170 within coordinates of
Gm56802 within coordinates of
Rr574555 1277 bp proximal
 SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A
rs586453526
MGI SNP Detail		 Chr3:28315619 Gm54170 within coordinates of
Gm56802 within coordinates of
Rr574555 1255 bp proximal
 SNP A/T T T T T T T T A T T T A A A A A A A A T T A T T T A A T T A A A
rs259201386
MGI SNP Detail		 Chr3:28315808 Gm54170 within coordinates of
Gm56802 within coordinates of
Rr574555 1066 bp proximal
 SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs228178746
MGI SNP Detail		 Chr3:28315825 Gm54170 within coordinates of
Gm56802 within coordinates of
Rr574555 1049 bp proximal
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs250902453
MGI SNP Detail		 Chr3:28315833 Gm54170 within coordinates of
Gm56802 within coordinates of
Rr574555 1041 bp proximal
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs29643105
MGI SNP Detail		 Chr3:28315854 Gm54170 within coordinates of
Gm56802 within coordinates of
Rr574555 1020 bp proximal
 SNP C/G G G G G G G G G G G G G G C G
rs228019931
MGI SNP Detail		 Chr3:28315930 Gm54170 within coordinates of
Gm56802 within coordinates of
Rr574555 944 bp proximal
 SNP C/T T T T T T T T T T T T T T T T T T T T T T T C T T T T C T T T T T T T T T T T T C T T T T T T T C T T T T
rs254611433
MGI SNP Detail		 Chr3:28315985 Gm54170 within coordinates of
Gm56802 within coordinates of
Rr574555 889 bp proximal
 SNP A/T T T T T T T T T T T T T T T T T T T T T T T A T T T T A T T T T T T T T T T T T A T T T T T T T A T T T T
rs217003426
MGI SNP Detail		 Chr3:28316042 Gm54170 within coordinates of
Gm56802 within coordinates of
Rr574555 832 bp proximal
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C
SNP ID
(GRCm39)		 Map Position
(GRCm39)		 Gene & Category Variation
Type		 Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
129X1/SvJ
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PL/J
PWD/PhJ
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs50729252
MGI SNP Detail		 Chr3:28316064 Gm54170 within coordinates of
Gm56802 within coordinates of
Rr574555 810 bp proximal
 SNP C C C
rs252937563
MGI SNP Detail		 Chr3:28316077 Gm54170 within coordinates of
Gm56802 within coordinates of
Rr574555 797 bp proximal
 SNP G/T T T T T T T T T T T T T T T T T T T T T T T T T G T T T T T T T T T T T G T T T T T T T T T T T
rs214907100
MGI SNP Detail		 Chr3:28316090 Gm54170 within coordinates of
Gm56802 within coordinates of
Rr574555 784 bp proximal
 SNP A/G A A A A A A A A A A A A A A A A A A A A A A G A A A A G A A A A A A A A A A A G A A A A A A A A A A A A
rs240670837
MGI SNP Detail		 Chr3:28316094 Gm54170 within coordinates of
Gm56802 within coordinates of
Rr574555 780 bp proximal
 SNP C/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G C G G G G
rs256875393
MGI SNP Detail		 Chr3:28316166 Gm54170 within coordinates of
Gm56802 within coordinates of
Rr574555 708 bp proximal
 SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs222942029
MGI SNP Detail		 Chr3:28316172 Gm54170 within coordinates of
Gm56802 within coordinates of
Rr574555 702 bp proximal
 SNP A/G A A A A A A A A A A A A A A A A A A A A G A A A A G A A A A A A A A A A A A G A A A A A A A G A A A A
rs241016106
MGI SNP Detail		 Chr3:28316173 Gm54170 within coordinates of
Gm56802 within coordinates of
Rr574555 701 bp proximal
 SNP C/T T T T T T T T T T T T T T T T T T T T T C T T T T C T T T T T T T T T T T T C T T T T T T T C T T T T
rs250347184
MGI SNP Detail		 Chr3:28316195 Gm54170 within coordinates of
Gm56802 within coordinates of
Rr574555 679 bp proximal
 SNP A/C C C C C C C C C C C C C C C C C C C C C C A C C C C A C C C C C C C C C C C C A C C C C C C C C C C C C
rs583598020
MGI SNP Detail		 Chr3:28316250 Gm54170 within coordinates of
Gm56802 within coordinates of
Rr574555 624 bp proximal
 SNP C/T T T T T T T T T T T T T T T T T T T T T T T C T T T T C T T T T T T T T T T T T C T T T T T T T T T T T T
rs29643108
MGI SNP Detail		 Chr3:28316293 Gm54170 within coordinates of
Gm56802 within coordinates of
Rr574555 581 bp proximal
 SNP G/T T T T T T T T T T T T T T G T
rs242764699
MGI SNP Detail		 Chr3:28316392 Gm54170 within coordinates of
Gm56802 within coordinates of
Rr574555 482 bp proximal
 SNP A/C A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A C A A A A
rs259135853
MGI SNP Detail		 Chr3:28316407 Gm54170 within coordinates of
Gm56802 within coordinates of
Rr574555 467 bp proximal
 SNP A/G A A A A A A A A A A A A A A A A A A A A A A G A A A A G A A A A A G A A A A A A G A A A A A A A G A A A A
rs228144317
MGI SNP Detail		 Chr3:28316414 Gm54170 within coordinates of
Gm56802 within coordinates of
Rr574555 460 bp proximal
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs246118422
MGI SNP Detail		 Chr3:28316446 Gm54170 within coordinates of
Gm56802 within coordinates of
Rr574555 428 bp proximal
 SNP A/T A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A T A A A A
rs29643111
MGI SNP Detail		 Chr3:28316517 Gm54170 within coordinates of
Gm56802 within coordinates of
Rr574555 357 bp proximal
 SNP A/G G G G G G G G G G G A G G G G
rs29644034
MGI SNP Detail		 Chr3:28316574 Cpgi13025 within coordinates of
Gm54170 within coordinates of
Gm56802 within coordinates of
Rr574555 300 bp proximal
 SNP G/T G T G G G T G T T T T T G T G G G G
rs228534396
MGI SNP Detail		 Chr3:28316586 Cpgi13025 within coordinates of
Gm54170 within coordinates of
Gm56802 within coordinates of
Rr574555 288 bp proximal
 SNP G/T G G G G G G G G G G G G G G G G G G G G G G T G G G G T G G G G G G G G G G G G T G G G G G G G G G G G G
rs250152320
MGI SNP Detail		 Chr3:28316666 Cpgi13025 within coordinates of
Gm54170 within coordinates of
Gm56802 within coordinates of
Rr574555 208 bp proximal
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs216947375
MGI SNP Detail		 Chr3:28316669 Cpgi13025 within coordinates of
Gm54170 within coordinates of
Gm56802 within coordinates of
Rr574555 205 bp proximal
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs229541318
MGI SNP Detail		 Chr3:28316712 Cpgi13025 within coordinates of
Gm54170 within coordinates of
Gm56802 within coordinates of
Rr574555 162 bp proximal
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs245618096
MGI SNP Detail		 Chr3:28316743 Cpgi13025 within coordinates of
Gm54170 within coordinates of
Gm56802 within coordinates of
Rr574555 131 bp proximal
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs29644037
MGI SNP Detail		 Chr3:28316748 Cpgi13025 within coordinates of
Gm54170 within coordinates of
Gm56802 within coordinates of
Rr574555 126 bp proximal
 SNP A/G A A G A A A G A G G G G G G G A G A G
rs238363255
MGI SNP Detail		 Chr3:28316788 Cpgi13025 within coordinates of
Gm54170 within coordinates of
Gm56802 within coordinates of
Rr574555 86 bp proximal
 SNP A/T A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A T A A A A
rs261856499
MGI SNP Detail		 Chr3:28317024 Cpgi13025 within coordinates of
Gm54170 within coordinates of
Gm56802 within coordinates of
Rr574555 within coordinates of
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs214495054
MGI SNP Detail		 Chr3:28317176 Cpgi13025 within coordinates of
Gm54170 within coordinates of
Gm56802 within coordinates of
Rr574555 within coordinates of
 SNP A/T T T T T T T T T T T T T T T T T T T T T T T A T T T T T T T T T T T T T T T T T T T T T T T T T A T T T T
SNP ID
(GRCm39)		 Map Position
(GRCm39)		 Gene & Category Variation
Type		 Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
129X1/SvJ
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PL/J
PWD/PhJ
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs29644040
MGI SNP Detail		 Chr3:28317188 Cpgi13025 within coordinates of
Gm54170 within coordinates of
Gm56802 within coordinates of
Rr574555 within coordinates of
 SNP C/T C C C C C C C C C C T C C T C
rs250283930
MGI SNP Detail		 Chr3:28317192 Cpgi13025 within coordinates of
Gm54170 within coordinates of
Gm56802 within coordinates of
Rr574555 within coordinates of
 SNP G/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T G T T T T
rs29644043
MGI SNP Detail		 Chr3:28317209 Cpgi13025 within coordinates of
Gm54170 within coordinates of
Gm56802 within coordinates of
Rr574555 within coordinates of
 SNP A/G A A G A A A G A G G G G G G G A G A G
rs236323601
MGI SNP Detail		 Chr3:28317346 Cpgi13025 within coordinates of
Gm54170 within coordinates of
Gm56802 within coordinates of
Rr574555 within coordinates of
 SNP C/T T T T T T T T C T T C T C T T T C T T T T C T
rs252812923
MGI SNP Detail
Alliance Variant		 Chr3:28317568 Cpgi13025 within coordinates of
Gm54170 within coordinates of
Gm56802 within coordinates of
Rr574555 within coordinates of
Tnik mRNA-UTR
Tnik Noncoding-Transcript-Variant
 SNP C/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G C G G G G
rs29644896
MGI SNP Detail
Alliance Variant		 Chr3:28317598 Cpgi13025 within coordinates of
Gm54170 within coordinates of
Gm56802 within coordinates of
Rr574555 within coordinates of
Tnik mRNA-UTR
Tnik Noncoding-Transcript-Variant
 SNP G/T G G G G G G G G G G T G
rs29644899
MGI SNP Detail
Alliance Variant		 Chr3:28317691 Cpgi13025 within coordinates of
Gm54170 within coordinates of
Gm56802 within coordinates of
Rr574555 within coordinates of
Tnik mRNA-UTR
Tnik Noncoding-Transcript-Variant
 SNP C/T C T C C C T T T T T C C C C
rs29644902
MGI SNP Detail
Alliance Variant		 Chr3:28317874 Cpgi13025 within coordinates of
Gm54170 within coordinates of
Gm56802 within coordinates of
Rr574555 72 bp distal
Rr574556 within coordinates of
Tnik Intron
Tnik Noncoding-Transcript-Variant
 SNP C/T T C T T T C C C C C C C T C T C
rs49801284
MGI SNP Detail
Alliance Variant		 Chr3:28317959 Cpgi13025 within coordinates of
Gm54170 within coordinates of
Gm56802 within coordinates of
Rr574555 157 bp distal
Rr574556 within coordinates of
Tnik Intron
Tnik Noncoding-Transcript-Variant
 SNP C/T T T T C
rs245263171
MGI SNP Detail
Alliance Variant		 Chr3:28317960 Cpgi13025 within coordinates of
Gm54170 within coordinates of
Gm56802 within coordinates of
Rr574555 158 bp distal
Rr574556 within coordinates of
Tnik Intron
Tnik Noncoding-Transcript-Variant
 SNP A/C/T C C C C C C C C C C C C C C C C C C C C C A C C C C A C C C C C C C C C C C C A C C C C C C C T C C C C
rs259296721
MGI SNP Detail
Alliance Variant		 Chr3:28318034 Cpgi13025 within coordinates of
Gm54170 within coordinates of
Gm56802 within coordinates of
Rr574555 232 bp distal
Rr574556 within coordinates of
Tnik Intron
Tnik Noncoding-Transcript-Variant
 SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs29645885
MGI SNP Detail
Alliance Variant		 Chr3:28318056 Cpgi13025 within coordinates of
Gm54170 within coordinates of
Gm56802 within coordinates of
Rr574555 254 bp distal
Rr574556 within coordinates of
Tnik Intron
Tnik Noncoding-Transcript-Variant
 SNP A/G G G G G G G G G G G A G G G G
rs229488002
MGI SNP Detail
Alliance Variant		 Chr3:28318060 Cpgi13025 within coordinates of
Gm54170 within coordinates of
Gm56802 within coordinates of
Rr574555 258 bp distal
Rr574556 within coordinates of
Tnik Intron
Tnik Noncoding-Transcript-Variant
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs582952014
MGI SNP Detail
Alliance Variant		 Chr3:28318133 Cpgi13025 within coordinates of
Gm54170 within coordinates of
Gm56802 within coordinates of
Rr574555 331 bp distal
Rr574556 within coordinates of
Tnik Intron
Tnik Noncoding-Transcript-Variant
 SNP G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G
rs245568107
MGI SNP Detail
Alliance Variant		 Chr3:28318270 Gm54170 within coordinates of
Gm56802 within coordinates of
Rr574555 468 bp distal
Rr574556 within coordinates of
Tnik Intron
Tnik Noncoding-Transcript-Variant
 SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs258500074
MGI SNP Detail
Alliance Variant		 Chr3:28318313 Gm54170 within coordinates of
Gm56802 within coordinates of
Rr574555 511 bp distal
Rr574556 within coordinates of
Tnik Intron
Tnik Noncoding-Transcript-Variant
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs29645888
MGI SNP Detail
Alliance Variant		 Chr3:28318337 Gm54170 within coordinates of
Gm56802 within coordinates of
Rr574555 535 bp distal
Rr574556 within coordinates of
Tnik Intron
Tnik Noncoding-Transcript-Variant
 SNP A/G A A A A A A A A A A A A A G A
rs250363309
MGI SNP Detail
Alliance Variant		 Chr3:28318340 Gm54170 within coordinates of
Gm56802 within coordinates of
Rr574555 538 bp distal
Rr574556 within coordinates of
Tnik Intron
Tnik Noncoding-Transcript-Variant
 SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs214791604
MGI SNP Detail
Alliance Variant		 Chr3:28318389 Gm54170 within coordinates of
Gm56802 within coordinates of
Rr574555 587 bp distal
Rr574557 within coordinates of
Tnik Intron
Tnik Noncoding-Transcript-Variant
Tssr32865 within coordinates of
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs234390429
MGI SNP Detail
Alliance Variant		 Chr3:28318393 Gm54170 within coordinates of
Gm56802 within coordinates of
Rr574555 591 bp distal
Rr574557 within coordinates of
Tnik Intron
Tnik Noncoding-Transcript-Variant
Tssr32865 within coordinates of
 SNP A/C C C C C C C C C C C C C C C C C C C C C C C A C C C C A C C C C C A C C C C C C A C C C C C C C A C C C C
rs244078313
MGI SNP Detail
Alliance Variant		 Chr3:28318399 Gm54170 within coordinates of
Gm56802 within coordinates of
Rr574555 597 bp distal
Rr574557 within coordinates of
Tnik Intron
Tnik Noncoding-Transcript-Variant
 SNP C/T T T T T T T T T T T T T T T T T T T T T T T C T T T T C T T T T T C T T T T T T C T T T T T T T C T T T T
rs29645891
MGI SNP Detail
Alliance Variant		 Chr3:28318423 Gm54170 within coordinates of
Gm56802 within coordinates of
Rr574555 621 bp distal
Rr574557 within coordinates of
Tnik Intron
Tnik Noncoding-Transcript-Variant
 SNP G/T T T T T T T T T T T G T T T T
rs216530464
MGI SNP Detail
Alliance Variant		 Chr3:28318465 Gm54170 within coordinates of
Gm56802 within coordinates of
Rr574555 663 bp distal
Rr574557 within coordinates of
Tnik Intron
Tnik Noncoding-Transcript-Variant
 SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs236261602
MGI SNP Detail
Alliance Variant		 Chr3:28318466 Gm54170 within coordinates of
Gm56802 within coordinates of
Rr574555 664 bp distal
Rr574557 within coordinates of
Tnik Intron
Tnik Noncoding-Transcript-Variant
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs29646774
MGI SNP Detail
Alliance Variant		 Chr3:28318470 Gm54170 within coordinates of
Gm56802 within coordinates of
Rr574555 668 bp distal
Rr574557 within coordinates of
Tnik Intron
Tnik Noncoding-Transcript-Variant
 SNP C/T C C C C C C C C C C C C C T C
SNP ID
(GRCm39)		 Map Position
(GRCm39)		 Gene & Category Variation
Type		 Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
129X1/SvJ
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PL/J
PWD/PhJ
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs52547459
MGI SNP Detail
Alliance Variant		 Chr3:28318527 Gm54170 within coordinates of
Gm56802 within coordinates of
Rr574555 725 bp distal
Rr574557 within coordinates of
Tnik Intron
Tnik Noncoding-Transcript-Variant
 SNP C C C
rs586805189
MGI SNP Detail
Alliance Variant		 Chr3:28318572 Gm54170 within coordinates of
Gm56802 within coordinates of
Rr574555 770 bp distal
Rr574557 within coordinates of
Tnik Intron
Tnik Noncoding-Transcript-Variant
 SNP C/G C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C G
rs581571157
MGI SNP Detail
Alliance Variant		 Chr3:28318623 Gm54170 within coordinates of
Gm56802 within coordinates of
Rr574555 821 bp distal
Rr574557 within coordinates of
Tnik Intron
Tnik Noncoding-Transcript-Variant
 SNP T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T
rs238079122
MGI SNP Detail
Alliance Variant		 Chr3:28318690 Gm54170 within coordinates of
Gm56802 within coordinates of
Rr574555 888 bp distal
Rr574557 within coordinates of
Tnik Intron
Tnik Noncoding-Transcript-Variant
 SNP C/G G G G G G G G G G G G G G G G G G G G G G G C G G G G C G G G G G C G G G G G G C G G G G G G G C G G G G
rs257910028
MGI SNP Detail
Alliance Variant		 Chr3:28318715 Gm54170 within coordinates of
Gm56802 within coordinates of
Rr574555 913 bp distal
Rr574557 within coordinates of
Tnik Intron
Tnik Noncoding-Transcript-Variant
 SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs29646777
MGI SNP Detail
Alliance Variant		 Chr3:28318716 Gm54170 within coordinates of
Gm56802 within coordinates of
Rr574555 914 bp distal
Rr574557 within coordinates of
Tnik Intron
Tnik Noncoding-Transcript-Variant
 SNP A/C A A A A A A A A A A A A A C A
rs236834633
MGI SNP Detail
Alliance Variant		 Chr3:28318827 Gm54170 within coordinates of
Gm56802 within coordinates of
Rr574555 1025 bp distal
Rr574557 within coordinates of
Tnik Intron
Tnik Noncoding-Transcript-Variant
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs29646780
MGI SNP Detail
Alliance Variant		 Chr3:28319010 Gm54170 within coordinates of
Gm56802 within coordinates of
Rr574555 1208 bp distal
Rr574557 within coordinates of
Tnik Intron
Tnik Noncoding-Transcript-Variant
 SNP C/T C C C C C C C C C C T C C T C
rs222927221
MGI SNP Detail
Alliance Variant		 Chr3:28319049 Gm54170 within coordinates of
Gm56802 within coordinates of
Rr574555 1247 bp distal
Rr574557 within coordinates of
Tnik Intron
Tnik Noncoding-Transcript-Variant
 SNP A/C A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A C A A A A
rs239496239
MGI SNP Detail
Alliance Variant		 Chr3:28319054 Gm54170 within coordinates of
Gm56802 within coordinates of
Rr574555 1252 bp distal
Rr574557 within coordinates of
Tnik Intron
Tnik Noncoding-Transcript-Variant
 SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs29639644
MGI SNP Detail
Alliance Variant		 Chr3:28319058 Gm54170 within coordinates of
Gm56802 within coordinates of
Rr574555 1256 bp distal
Rr574557 within coordinates of
Tnik Intron
Tnik Noncoding-Transcript-Variant
 SNP A/G G G G G G G G G A G A G
rs230452948
MGI SNP Detail
Alliance Variant		 Chr3:28319075 Gm54170 within coordinates of
Gm56802 within coordinates of
Rr574555 1273 bp distal
Rr574557 within coordinates of
Tnik Intron
Tnik Noncoding-Transcript-Variant
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs256747302
MGI SNP Detail
Alliance Variant		 Chr3:28319105 Gm54170 within coordinates of
Gm56802 within coordinates of
Rr574555 1303 bp distal
Rr574557 within coordinates of
Tnik Intron
Tnik Noncoding-Transcript-Variant
 SNP G/T G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G T G G G G
rs29639647
MGI SNP Detail
Alliance Variant		 Chr3:28319131 Gm54170 within coordinates of
Gm56802 within coordinates of
Rr574555 1329 bp distal
Rr574557 within coordinates of
Tnik Intron
Tnik Noncoding-Transcript-Variant
 SNP A/T T T A T T T A A A A A T T A
rs227746406
MGI SNP Detail
Alliance Variant		 Chr3:28319174 Gm54170 within coordinates of
Gm56802 within coordinates of
Rr574555 1372 bp distal
Rr574557 within coordinates of
Tnik Intron
Tnik Noncoding-Transcript-Variant
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs244020105
MGI SNP Detail
Alliance Variant		 Chr3:28319280 Gm54170 within coordinates of
Gm56802 within coordinates of
Rr574555 1478 bp distal
Rr574557 within coordinates of
Tnik Intron
Tnik Noncoding-Transcript-Variant
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs216470691
MGI SNP Detail
Alliance Variant		 Chr3:28319411 Gm54170 within coordinates of
Rr574555 1609 bp distal
Rr574558 within coordinates of
Tnik Intron
Tnik Noncoding-Transcript-Variant
 SNP A/C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C A C C C C
rs236196121
MGI SNP Detail
Alliance Variant		 Chr3:28319440 Gm54170 within coordinates of
Rr574555 1638 bp distal
Rr574558 within coordinates of
Tnik Intron
Tnik Noncoding-Transcript-Variant
 SNP A/G A A A A A A A A A A A A A A A A A A A A A A G A A A A G A A A A A G A A A A A A G A A A A A A A A A A A A
rs246330690
MGI SNP Detail
Alliance Variant		 Chr3:28319464 Gm54170 within coordinates of
Rr574555 1662 bp distal
Rr574558 within coordinates of
Tnik Intron
Tnik Noncoding-Transcript-Variant
 SNP C/T T T T T T T T T T T T T T T T T T T T T T T C T T T T C T T T T T C T T T T T T C T T T T T T T C T T T T
rs217042503
MGI SNP Detail
Alliance Variant		 Chr3:28319486 Gm54170 within coordinates of
Rr574555 1684 bp distal
Rr574558 within coordinates of
Tnik Intron
Tnik Noncoding-Transcript-Variant
 SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs46442809
MGI SNP Detail
Alliance Variant		 Chr3:28319505 Gm54170 within coordinates of
Rr574555 1703 bp distal
Rr574558 within coordinates of
Tnik Intron
Tnik Noncoding-Transcript-Variant
 SNP A/G G G A
rs262443477
MGI SNP Detail
Alliance Variant		 Chr3:28319532 Gm54170 within coordinates of
Rr574555 1730 bp distal
Rr574558 within coordinates of
Tnik Intron
Tnik Noncoding-Transcript-Variant
 SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs212074967
MGI SNP Detail
Alliance Variant		 Chr3:28319546 Gm54170 within coordinates of
Rr574555 1744 bp distal
Rr574558 within coordinates of
Tnik Intron
Tnik Noncoding-Transcript-Variant
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs29639650
MGI SNP Detail
Alliance Variant		 Chr3:28319577 Gm54170 within coordinates of
Rr574555 1775 bp distal
Rr574558 within coordinates of
Tnik Intron
Tnik Noncoding-Transcript-Variant
 SNP C/T T T T T T C T C C
rs230789941
MGI SNP Detail
Alliance Variant		 Chr3:28319639 Gm54170 within coordinates of
Rr574555 1837 bp distal
Rr574558 within coordinates of
Tnik Intron
Tnik Noncoding-Transcript-Variant
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
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Showing SNP(s) 1 - 100 of 102
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
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Send questions and comments to User Support. 		last database update
03/18/2025
MGI 6.24 		The Jackson Laboratory
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