About   Help   FAQ
Mouse SNP Summary
Symbol
Name
ID
Rr574577
regulatory region 574577
MGI:8036709

<< first < prev12 next > last >>
Showing SNP(s) 1 - 100 of 140

Your search exceeds the maximum result limit of 100,000 SNPs that can be displayed or exported to text. Use filters to refine your search or select a sub-region from the SNP Density Heatmap.
Loading...
Show only selected strains with alleles     Show all selected strains    
Drag columns to re-order.   Column order is reset with Filter or Show option change.
SNP ID
(GRCm39)
Map Position
(GRCm39)
Gene & Category Variation
Type
Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
129X1/SvJ
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PL/J
PWD/PhJ
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs226586173
MGI SNP Detail
Alliance Variant
Chr3:28460967 Rr407041 within coordinates of
Rr574577 1989 bp proximal
Tnik Intron
Tnik mRNA-UTR
Tnik Noncoding-Transcript-Variant
SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs243613843
MGI SNP Detail
Alliance Variant
Chr3:28460977 Rr407041 within coordinates of
Rr574577 1979 bp proximal
Tnik Intron
Tnik mRNA-UTR
Tnik Noncoding-Transcript-Variant
SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs213011690
MGI SNP Detail
Alliance Variant
Chr3:28461006 Rr407041 within coordinates of
Rr574577 1950 bp proximal
Tnik Intron
Tnik mRNA-UTR
Tnik Noncoding-Transcript-Variant
SNP G/T G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G T G G G G
rs579554577
MGI SNP Detail
Alliance Variant
Chr3:28461018 Rr407041 within coordinates of
Rr574577 1938 bp proximal
Tnik Intron
Tnik mRNA-UTR
Tnik Noncoding-Transcript-Variant
SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs31095040
MGI SNP Detail
Alliance Variant
Chr3:28461050 Rr407041 within coordinates of
Rr574577 1906 bp proximal
Tnik Intron
Tnik mRNA-UTR
Tnik Noncoding-Transcript-Variant
SNP A/C C C C A
rs261045783
MGI SNP Detail
Alliance Variant
Chr3:28461095 Rr407041 within coordinates of
Rr574577 1861 bp proximal
Tnik Intron
Tnik mRNA-UTR
Tnik Noncoding-Transcript-Variant
SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs216512231
MGI SNP Detail
Alliance Variant
Chr3:28461108 Rr407041 within coordinates of
Rr574577 1848 bp proximal
Tnik Intron
Tnik mRNA-UTR
Tnik Noncoding-Transcript-Variant
SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs239007983
MGI SNP Detail
Alliance Variant
Chr3:28461131 Rr407041 within coordinates of
Rr574577 1825 bp proximal
Tnik Intron
Tnik mRNA-UTR
Tnik Noncoding-Transcript-Variant
SNP G/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T G T T T T
rs262190056
MGI SNP Detail
Alliance Variant
Chr3:28461149 Rr407041 within coordinates of
Rr574577 1807 bp proximal
Tnik Intron
Tnik mRNA-UTR
Tnik Noncoding-Transcript-Variant
SNP G/T G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G T G G G G
rs220369972
MGI SNP Detail
Alliance Variant
Chr3:28461170 Rr407041 within coordinates of
Rr574577 1786 bp proximal
Tnik Intron
Tnik mRNA-UTR
Tnik Noncoding-Transcript-Variant
SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs238031030
MGI SNP Detail
Alliance Variant
Chr3:28461221 Rr407041 within coordinates of
Rr574577 1735 bp proximal
Tnik Intron
Tnik mRNA-UTR
Tnik Noncoding-Transcript-Variant
SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs29653675
MGI SNP Detail
Alliance Variant
Chr3:28461231 Rr407041 within coordinates of
Rr574577 1725 bp proximal
Tnik Intron
Tnik mRNA-UTR
Tnik Noncoding-Transcript-Variant
SNP A/G G G G G G G G G G G G G G G A
rs29653678
MGI SNP Detail
Alliance Variant
Chr3:28461290 Rr407041 within coordinates of
Rr574577 1666 bp proximal
Tnik Intron
Tnik mRNA-UTR
Tnik Noncoding-Transcript-Variant
SNP A/G G G G G G G G G G G G G G A G
rs249857106
MGI SNP Detail
Alliance Variant
Chr3:28461375 Rr407041 within coordinates of
Rr574577 1581 bp proximal
Tnik Intron
Tnik mRNA-UTR
Tnik Noncoding-Transcript-Variant
SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs264333877
MGI SNP Detail
Alliance Variant
Chr3:28461387 Rr407041 within coordinates of
Rr574577 1569 bp proximal
Tnik Intron
Tnik mRNA-UTR
Tnik Noncoding-Transcript-Variant
SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs231928023
MGI SNP Detail
Alliance Variant
Chr3:28461404 Rr407041 within coordinates of
Rr574577 1552 bp proximal
Tnik Intron
Tnik mRNA-UTR
Tnik Noncoding-Transcript-Variant
SNP A/C A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A C A A A A
rs246254992
MGI SNP Detail
Alliance Variant
Chr3:28461511 Rr407041 within coordinates of
Rr574577 1445 bp proximal
Tnik Intron
Tnik mRNA-UTR
Tnik Noncoding-Transcript-Variant
SNP A/C/T C C C C C C C C C C C C C C C C C C C C C C T C C C C T C C C C C T C C C C C C T C C C C C C C C C C C A
rs265057350
MGI SNP Detail
Alliance Variant
Chr3:28461512 Rr407041 within coordinates of
Rr574577 1444 bp proximal
Tnik Intron
Tnik mRNA-UTR
Tnik Noncoding-Transcript-Variant
SNP C/T C C C C C C C C C C C C C C C C C C C C C C T C C C C T C C C C C T C C C C C C C C C C C C C C C C C C C
rs29653681
MGI SNP Detail
Alliance Variant
Chr3:28461575 Rr407041 within coordinates of
Rr574577 1381 bp proximal
Tnik Intron
Tnik mRNA-UTR
Tnik Noncoding-Transcript-Variant
SNP A/T A A A A A A A A A A T A A T A
rs243531519
MGI SNP Detail
Alliance Variant
Chr3:28461709 Rr407041 within coordinates of
Rr574577 1247 bp proximal
Tnik Intron
Tnik mRNA-UTR
Tnik Noncoding-Transcript-Variant
SNP C/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G C G G G G
rs212928202
MGI SNP Detail
Alliance Variant
Chr3:28461728 Rr407041 within coordinates of
Rr574577 1228 bp proximal
Tnik Intron
Tnik mRNA-UTR
Tnik Noncoding-Transcript-Variant
SNP A/C A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A C A A A A
rs228614004
MGI SNP Detail
Alliance Variant
Chr3:28461865 Rr407041 within coordinates of
Rr574577 1091 bp proximal
Tnik Intron
Tnik mRNA-UTR
Tnik Noncoding-Transcript-Variant
SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs260371718
MGI SNP Detail
Alliance Variant
Chr3:28461922 Rr407041 within coordinates of
Rr574577 1034 bp proximal
Tnik Intron
Tnik mRNA-UTR
Tnik Noncoding-Transcript-Variant
SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs215947095
MGI SNP Detail
Alliance Variant
Chr3:28461925 Rr407041 within coordinates of
Rr574577 1031 bp proximal
Tnik Intron
Tnik mRNA-UTR
Tnik Noncoding-Transcript-Variant
SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs241373448
MGI SNP Detail
Alliance Variant
Chr3:28461999 Rr407041 within coordinates of
Rr574577 957 bp proximal
Tnik Intron
Tnik mRNA-UTR
Tnik Noncoding-Transcript-Variant
SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
SNP ID
(GRCm39)
Map Position
(GRCm39)
Gene & Category Variation
Type
Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
129X1/SvJ
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PL/J
PWD/PhJ
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs251001171
MGI SNP Detail
Alliance Variant
Chr3:28462042 Rr407041 within coordinates of
Rr574577 914 bp proximal
Tnik Intron
Tnik mRNA-UTR
Tnik Noncoding-Transcript-Variant
SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs214740292
MGI SNP Detail
Alliance Variant
Chr3:28462127 Rr407041 within coordinates of
Rr574577 829 bp proximal
Tnik Intron
Tnik mRNA-UTR
Tnik Noncoding-Transcript-Variant
SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs230318067
MGI SNP Detail
Alliance Variant
Chr3:28462128 Rr407041 within coordinates of
Rr574577 828 bp proximal
Tnik Intron
Tnik mRNA-UTR
Tnik Noncoding-Transcript-Variant
SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs249327252
MGI SNP Detail
Alliance Variant
Chr3:28462133 Rr407041 within coordinates of
Rr574577 823 bp proximal
Tnik Intron
Tnik mRNA-UTR
Tnik Noncoding-Transcript-Variant
SNP A/C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C A C C C C
rs218370763
MGI SNP Detail
Alliance Variant
Chr3:28462134 Rr407041 within coordinates of
Rr574577 822 bp proximal
Tnik Intron
Tnik mRNA-UTR
Tnik Noncoding-Transcript-Variant
SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs239171510
MGI SNP Detail
Alliance Variant
Chr3:28462172 Rr407041 within coordinates of
Rr574577 784 bp proximal
Tnik Intron
Tnik mRNA-UTR
Tnik Noncoding-Transcript-Variant
SNP A/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T A T T T T
rs264062339
MGI SNP Detail
Alliance Variant
Chr3:28462190 Rr407041 within coordinates of
Rr574577 766 bp proximal
Tnik Intron
Tnik mRNA-UTR
Tnik Noncoding-Transcript-Variant
SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T
rs224005430
MGI SNP Detail
Alliance Variant
Chr3:28462198 Rr407041 within coordinates of
Rr574577 758 bp proximal
Tnik Intron
Tnik mRNA-UTR
Tnik Noncoding-Transcript-Variant
SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs248745418
MGI SNP Detail
Alliance Variant
Chr3:28462200 Rr407041 within coordinates of
Rr574577 756 bp proximal
Tnik Intron
Tnik mRNA-UTR
Tnik Noncoding-Transcript-Variant
SNP G/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T G T T T T
rs29654524
MGI SNP Detail
Alliance Variant
Chr3:28462260 Rr407041 within coordinates of
Rr574577 696 bp proximal
Tnik Intron
Tnik mRNA-UTR
Tnik Noncoding-Transcript-Variant
SNP A/T T T T T T T T T A T T A A
rs220196987
MGI SNP Detail
Alliance Variant
Chr3:28462267 Rr407041 within coordinates of
Rr574577 689 bp proximal
Tnik Intron
Tnik mRNA-UTR
Tnik Noncoding-Transcript-Variant
SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs29654527
MGI SNP Detail
Alliance Variant
Chr3:28462316 Rr407041 within coordinates of
Rr574577 640 bp proximal
Tnik Intron
Tnik mRNA-UTR
Tnik Noncoding-Transcript-Variant
SNP A/G A A G A A A G A G G G A G A A G G
rs256795957
MGI SNP Detail
Alliance Variant
Chr3:28462319 Rr407041 within coordinates of
Rr574577 637 bp proximal
Tnik Intron
Tnik mRNA-UTR
Tnik Noncoding-Transcript-Variant
SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs228565417
MGI SNP Detail
Alliance Variant
Chr3:28462334 Rr407041 within coordinates of
Rr574577 622 bp proximal
Tnik Intron
Tnik mRNA-UTR
Tnik Noncoding-Transcript-Variant
SNP C/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G C G G G G
rs254779538
MGI SNP Detail
Alliance Variant
Chr3:28462367 Rr574577 589 bp proximal
Tnik Intron
Tnik mRNA-UTR
Tnik Noncoding-Transcript-Variant
SNP A/C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C A C C C C
rs29654530
MGI SNP Detail
Alliance Variant
Chr3:28462437 Rr574577 519 bp proximal
Tnik Intron
Tnik mRNA-UTR
Tnik Noncoding-Transcript-Variant
SNP A/G G A G G G A G A G G G G G G G G
rs29654533
MGI SNP Detail
Alliance Variant
Chr3:28462446 Rr574577 510 bp proximal
Tnik Intron
Tnik mRNA-UTR
Tnik Noncoding-Transcript-Variant
SNP G/T T T T T T T T T G T T G G
rs255530600
MGI SNP Detail
Alliance Variant
Chr3:28462451 Rr574577 505 bp proximal
Tnik Intron
Tnik mRNA-UTR
Tnik Noncoding-Transcript-Variant
SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs214670981
MGI SNP Detail
Alliance Variant
Chr3:28462568 Rr574577 388 bp proximal
Tnik Intron
Tnik mRNA-UTR
Tnik Noncoding-Transcript-Variant
SNP C/G C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C G C C C C
rs230286712
MGI SNP Detail
Alliance Variant
Chr3:28462569 Rr574577 387 bp proximal
Tnik Intron
Tnik mRNA-UTR
Tnik Noncoding-Transcript-Variant
SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs243384545
MGI SNP Detail
Alliance Variant
Chr3:28462758 Rr574577 198 bp proximal
Tnik Intron
Tnik mRNA-UTR
Tnik Noncoding-Transcript-Variant
SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs217009321
MGI SNP Detail
Alliance Variant
Chr3:28462779 Rr574577 177 bp proximal
Tnik Intron
Tnik mRNA-UTR
Tnik Noncoding-Transcript-Variant
SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs241657631
MGI SNP Detail
Alliance Variant
Chr3:28462847 Rr574577 109 bp proximal
Tnik Intron
Tnik mRNA-UTR
Tnik Noncoding-Transcript-Variant
SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs260645649
MGI SNP Detail
Alliance Variant
Chr3:28462871 Rr574577 85 bp proximal
Tnik Intron
Tnik mRNA-UTR
Tnik Noncoding-Transcript-Variant
SNP G/T G G G G G G G G G G G G G G G G G G G G G G T G G G G T G G G G G T G G G G G G T G G G G G G G G G G G G
rs223823634
MGI SNP Detail
Alliance Variant
Chr3:28462901 Rr574577 55 bp proximal
Tnik Intron
Tnik mRNA-UTR
Tnik Noncoding-Transcript-Variant
SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
SNP ID
(GRCm39)
Map Position
(GRCm39)
Gene & Category Variation
Type
Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
129X1/SvJ
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PL/J
PWD/PhJ
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs238431473
MGI SNP Detail
Alliance Variant
Chr3:28462908 Rr574577 48 bp proximal
Tnik Intron
Tnik mRNA-UTR
Tnik Noncoding-Transcript-Variant
SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs46938832
MGI SNP Detail
Alliance Variant
Chr3:28462947 Rr574577 9 bp proximal
Tnik Intron
Tnik mRNA-UTR
Tnik Noncoding-Transcript-Variant
SNP C C
rs237080727
MGI SNP Detail
Alliance Variant
Chr3:28462950 Rr574577 6 bp proximal
Tnik Intron
Tnik mRNA-UTR
Tnik Noncoding-Transcript-Variant
SNP C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C
rs29655396
MGI SNP Detail
Alliance Variant
Chr3:28462964 Rr574577 within coordinates of
Tnik Intron
Tnik mRNA-UTR
Tnik Noncoding-Transcript-Variant
SNP A/G A A A A A A A A A A G A A A A
rs29655399
MGI SNP Detail
Alliance Variant
Chr3:28463014 Rr574577 within coordinates of
Tnik Intron
Tnik mRNA-UTR
Tnik Noncoding-Transcript-Variant
SNP C/G C C C C C C C C C C G C C G C
rs225753980
MGI SNP Detail
Alliance Variant
Chr3:28463268 Rr574577 within coordinates of
Tnik Intron
Tnik mRNA-UTR
Tnik Noncoding-Transcript-Variant
SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs251368368
MGI SNP Detail
Alliance Variant
Chr3:28463270 Rr574577 within coordinates of
Tnik Intron
Tnik mRNA-UTR
Tnik Noncoding-Transcript-Variant
SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs263209563
MGI SNP Detail
Alliance Variant
Chr3:28463280 Rr574577 within coordinates of
Tnik Intron
Tnik mRNA-UTR
Tnik Noncoding-Transcript-Variant
SNP A/C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C A C C C C
rs233251169
MGI SNP Detail
Alliance Variant
Chr3:28463281 Rr574577 within coordinates of
Tnik Intron
Tnik mRNA-UTR
Tnik Noncoding-Transcript-Variant
SNP G/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T G T T T T
rs29655402
MGI SNP Detail
Alliance Variant
Chr3:28463293 Rr574577 within coordinates of
Tnik Intron
Tnik mRNA-UTR
Tnik Noncoding-Transcript-Variant
SNP A/G A A G A A A G A G G A G A A G A
rs29656305
MGI SNP Detail
Alliance Variant
Chr3:28463296 Rr574577 within coordinates of
Tnik Intron
Tnik mRNA-UTR
Tnik Noncoding-Transcript-Variant
SNP A/G G G G G G G A G G G G
rs243986243
MGI SNP Detail
Alliance Variant
Chr3:28463327 Rr574577 within coordinates of
Tnik Intron
Tnik mRNA-UTR
Tnik Noncoding-Transcript-Variant
SNP C/G C C C C G C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C G C C C C C C C C C
rs256527042
MGI SNP Detail
Alliance Variant
Chr3:28463328 Rr574577 within coordinates of
Tnik Intron
Tnik mRNA-UTR
Tnik Noncoding-Transcript-Variant
SNP G/T T T T T G T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T G T T T T T T T T T
rs223679319
MGI SNP Detail
Alliance Variant
Chr3:28463369 Rr574577 within coordinates of
Tnik Intron
Tnik mRNA-UTR
Tnik Noncoding-Transcript-Variant
SNP C/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G C G G G G
rs243349569
MGI SNP Detail
Alliance Variant
Chr3:28463379 Rr574577 within coordinates of
Tnik Intron
Tnik mRNA-UTR
Tnik Noncoding-Transcript-Variant
SNP G/T G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G T G G G G
rs29656308
MGI SNP Detail
Alliance Variant
Chr3:28463430 Rr574577 within coordinates of
Tnik Intron
Tnik mRNA-UTR
Tnik Noncoding-Transcript-Variant
SNP C/T T T C T T T C T C C C T C T T C T
rs234211601
MGI SNP Detail
Alliance Variant
Chr3:28463462 Rr574577 within coordinates of
Tnik Intron
Tnik mRNA-UTR
Tnik Noncoding-Transcript-Variant
SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs29656311
MGI SNP Detail
Alliance Variant
Chr3:28463473 Rr574577 within coordinates of
Tnik Intron
Tnik mRNA-UTR
Tnik Noncoding-Transcript-Variant
SNP A/G G G G G G G A G G G A G G A
rs215298772
MGI SNP Detail
Alliance Variant
Chr3:28463510 Rr574577 within coordinates of
Tnik Intron
Tnik mRNA-UTR
Tnik Noncoding-Transcript-Variant
SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T
rs240638468
MGI SNP Detail
Alliance Variant
Chr3:28463552 Rr574577 within coordinates of
Tnik Intron
Tnik mRNA-UTR
Tnik Noncoding-Transcript-Variant
SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T
rs250976213
MGI SNP Detail
Alliance Variant
Chr3:28463631 Rr574577 within coordinates of
Tnik Intron
Tnik mRNA-UTR
Tnik Noncoding-Transcript-Variant
SNP A/C A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A C A A A A
rs29648564
MGI SNP Detail
Alliance Variant
Chr3:28463710 Rr574577 within coordinates of
Tnik Intron
Tnik Noncoding-Transcript-Variant
SNP C/T T T T T T T T T T T T T T T C
rs229791138
MGI SNP Detail
Alliance Variant
Chr3:28463762 Rr574577 3 bp distal
Tnik Intron
Tnik Noncoding-Transcript-Variant
SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T
rs250321681
MGI SNP Detail
Alliance Variant
Chr3:28463763 Rr574577 4 bp distal
Tnik Intron
Tnik Noncoding-Transcript-Variant
SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs226087586
MGI SNP Detail
Alliance Variant
Chr3:28463809 Rr574577 50 bp distal
Tnik Intron
Tnik Noncoding-Transcript-Variant
SNP C/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G C G G G G
SNP ID
(GRCm39)
Map Position
(GRCm39)
Gene & Category Variation
Type
Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
129X1/SvJ
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PL/J
PWD/PhJ
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs248289220
MGI SNP Detail
Alliance Variant
Chr3:28463857 Rr574577 98 bp distal
Tnik Intron
Tnik Noncoding-Transcript-Variant
SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs262908687
MGI SNP Detail
Alliance Variant
Chr3:28463907 Rr574577 148 bp distal
Tnik Intron
Tnik Noncoding-Transcript-Variant
SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs225009555
MGI SNP Detail
Alliance Variant
Chr3:28463966 Rr574577 207 bp distal
Tnik Intron
Tnik Noncoding-Transcript-Variant
SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs237658620
MGI SNP Detail
Alliance Variant
Chr3:28464019 Rr574577 260 bp distal
Tnik Intron
Tnik Noncoding-Transcript-Variant
SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs29648567
MGI SNP Detail
Alliance Variant
Chr3:28464059 Rr574577 300 bp distal
Tnik Intron
Tnik Noncoding-Transcript-Variant
SNP G/T G G G G G G G G G G G G G T G
rs223650752
MGI SNP Detail
Alliance Variant
Chr3:28464140 Rr574577 381 bp distal
Tnik Intron
Tnik Noncoding-Transcript-Variant
SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs29648570
MGI SNP Detail
Alliance Variant
Chr3:28464178 Rr574577 419 bp distal
Tnik Intron
Tnik Noncoding-Transcript-Variant
SNP A/T T T T T T T T T T T T T T T A
rs264148677
MGI SNP Detail
Alliance Variant
Chr3:28464318 Rr574577 559 bp distal
Tnik Intron
Tnik Noncoding-Transcript-Variant
SNP G/T G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G T G G G G
rs235664036
MGI SNP Detail
Alliance Variant
Chr3:28464322 Rr574577 563 bp distal
Tnik Intron
Tnik Noncoding-Transcript-Variant
SNP G/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T G T T T T
rs252691915
MGI SNP Detail
Alliance Variant
Chr3:28464329 Rr574577 570 bp distal
Tnik Intron
Tnik Noncoding-Transcript-Variant
SNP C/G C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C G C C C C
rs229737855
MGI SNP Detail
Alliance Variant
Chr3:28464408 Rr574577 649 bp distal
Tnik Intron
Tnik Noncoding-Transcript-Variant
SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs250232259
MGI SNP Detail
Alliance Variant
Chr3:28464426 Rr574577 667 bp distal
Tnik Intron
Tnik Noncoding-Transcript-Variant
SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs583291615
MGI SNP Detail
Alliance Variant
Chr3:28464452 Rr574577 693 bp distal
Tnik Intron
Tnik Noncoding-Transcript-Variant
SNP A/T T T T T T T T T T T T T T T T T T T A T T T T T T T T T T T T T T T T T T
rs585840242
MGI SNP Detail
Alliance Variant
Chr3:28464453 Rr574577 694 bp distal
Tnik Intron
Tnik Noncoding-Transcript-Variant
SNP A/T T T T T T T T T T T T T T T T T T T T A T T T T T T T T T T T T T T T T
rs580446286
MGI SNP Detail
Alliance Variant
Chr3:28464454 Rr574577 695 bp distal
Tnik Intron
Tnik Noncoding-Transcript-Variant
SNP A/T T T T T T T T T T T T T T T T T T A T T T T T T T T T T T T T A
rs217817004
MGI SNP Detail
Alliance Variant
Chr3:28464513 Rr574577 754 bp distal
Tnik Intron
Tnik Noncoding-Transcript-Variant
SNP G/T G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G T G G G G
rs29648573
MGI SNP Detail
Alliance Variant
Chr3:28464549 Rr574577 790 bp distal
Tnik Intron
Tnik Noncoding-Transcript-Variant
SNP C/T C C C C C C C C C C C C C T C
rs29649226
MGI SNP Detail
Alliance Variant
Chr3:28464573 Rr574577 814 bp distal
Tnik Intron
Tnik Noncoding-Transcript-Variant
SNP A/G G G G G G G G G G G A G G A G
rs225203521
MGI SNP Detail
Alliance Variant
Chr3:28464615 Rr574577 856 bp distal
Tnik Intron
Tnik Noncoding-Transcript-Variant
SNP C/T T T T T T T T T T T T T T T T T T T T T T T C T T T T C T T T T T C T T T T T T C T T T T T T T C T T T T
rs237621524
MGI SNP Detail
Alliance Variant
Chr3:28464617 Rr574577 858 bp distal
Tnik Intron
Tnik Noncoding-Transcript-Variant
SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs250536107
MGI SNP Detail
Alliance Variant
Chr3:28464629 Rr574577 870 bp distal
Tnik Intron
Tnik Noncoding-Transcript-Variant
SNP A/C C C C C C C C C C C C C C C C C C C C C C C A C C C C A C C C C C A C C C C C C A C C C C C C C A C C C C
rs218050547
MGI SNP Detail
Alliance Variant
Chr3:28464634 Rr574577 875 bp distal
Tnik Intron
Tnik Noncoding-Transcript-Variant
SNP C/T C C C C C C C C C C C C C C C C C C C C C C T C C C C T C C C C C T C C C C C C T C C C C C C C C C C C C
rs236865651
MGI SNP Detail
Alliance Variant
Chr3:28464639 Rr574577 880 bp distal
Tnik Intron
Tnik Noncoding-Transcript-Variant
SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs6154660
MGI SNP Detail
Alliance Variant
Chr3:28464678 Rr574577 919 bp distal
Tnik Intron
Tnik Noncoding-Transcript-Variant
SNP A/G G A
rs6155086
MGI SNP Detail
Alliance Variant
Chr3:28464694 Rr574577 935 bp distal
Tnik Intron
Tnik Noncoding-Transcript-Variant
SNP C/T T C
<< first < prev12 next > last >>
Showing SNP(s) 1 - 100 of 140

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
Citing These Resources
Funding Information
Warranty Disclaimer, Privacy Notice, Licensing, & Copyright
Send questions and comments to User Support.
last database update
03/18/2025
MGI 6.24
The Jackson Laboratory

Building initial tooltip...