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Mouse SNP Summary
Symbol
Name
ID
Rr574695
regulatory region 574695
MGI:8036827

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SNP ID
(GRCm39)
Map Position
(GRCm39)
Gene & Category Variation
Type
Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PL/J
PWD/PhJ
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs232530717
MGI SNP Detail
Alliance Variant
Chr3:30033619 Mecom Intron
Rr574695 1992 bp proximal
SNP A/G/T T T T T T T T T T T T T T T T T T T T G T T A T T T T A T T T T T A T T T T T T A T T T T T T T T T T T T
rs255437973
MGI SNP Detail
Alliance Variant
Chr3:30033620 Mecom Intron
Rr574695 1991 bp proximal
SNP G/T T T T T T T T T T T T T T T T T T T T G T T G T T T T G T T T T T G T T T T T T G T T T T T T T T T T T T
rs256416099
MGI SNP Detail
Alliance Variant
Chr3:30033639 Mecom Intron
Rr574695 1972 bp proximal
SNP A/C C C C C C C C C C C C C C C C C C C C A C C C C C C C C C C C C C C C C C C C C C C C C C C C C A C C C C
rs223534542
MGI SNP Detail
Alliance Variant
Chr3:30033665 Mecom Intron
Rr574695 1946 bp proximal
SNP A/G G G G G G G G G G G G G G G G G G G G G G G A G G G G G G G G G G G G G G G G G A G G G G G G G G G G G G
rs243429978
MGI SNP Detail
Alliance Variant
Chr3:30033690 Mecom Intron
Rr574695 1921 bp proximal
SNP A/C A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A C A A A A
rs217003443
MGI SNP Detail
Alliance Variant
Chr3:30033717 Mecom Intron
Rr574695 1894 bp proximal
SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs252539419
MGI SNP Detail
Alliance Variant
Chr3:30033740 Mecom Intron
Rr574695 1871 bp proximal
SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs215927817
MGI SNP Detail
Alliance Variant
Chr3:30033741 Mecom Intron
Rr574695 1870 bp proximal
SNP C/T C C C C C C C C C C C C C C C C C C C T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C
rs238471971
MGI SNP Detail
Alliance Variant
Chr3:30033821 Mecom Coding-NonSynonymous
Mecom mRNA-UTR
Rr574695 1790 bp proximal
SNP A/C A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A C A A A A
rs250976070
MGI SNP Detail
Alliance Variant
Chr3:30033851 Mecom Coding-Synonymous
Mecom mRNA-UTR
Rr574695 1760 bp proximal
SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs219978789
MGI SNP Detail
Alliance Variant
Chr3:30033898 Mecom Coding-NonSynonymous
Mecom mRNA-UTR
Rr574695 1713 bp proximal
SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs229668438
MGI SNP Detail
Alliance Variant
Chr3:30034214 Mecom Coding-Synonymous
Mecom Intron
Mecom mRNA-UTR
Rr574695 1397 bp proximal
SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs250455041
MGI SNP Detail
Alliance Variant
Chr3:30034320 Mecom Coding-NonSynonymous
Mecom Intron
Mecom mRNA-UTR
Rr574695 1291 bp proximal
SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs222629502
MGI SNP Detail
Alliance Variant
Chr3:30035291 Mecom Intron
Rr574695 320 bp proximal
SNP C/T C C C C C C C C C C C C C C C C C C C T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C
rs251142903
MGI SNP Detail
Alliance Variant
Chr3:30035346 Mecom Intron
Rr574695 265 bp proximal
SNP C/T C C C C C C C C C C C C C C C C C C C C C T C C T C C C C C C C C C C C C C C C C C T C C C C
rs263125836
MGI SNP Detail
Alliance Variant
Chr3:30035389 Mecom Intron
Rr574695 222 bp proximal
SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T
rs225001395
MGI SNP Detail
Alliance Variant
Chr3:30035398 Mecom Intron
Rr574695 213 bp proximal
SNP C/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G C G G G G
rs243358486
MGI SNP Detail
Alliance Variant
Chr3:30035409 Mecom Intron
Rr574695 202 bp proximal
SNP G/T G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G T G G G G
rs256458530
MGI SNP Detail
Alliance Variant
Chr3:30035442 Mecom Intron
Rr574695 169 bp proximal
SNP A/C C C C C C C C C C C C C C C C C C C C A C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C
rs223602022
MGI SNP Detail
Alliance Variant
Chr3:30035470 Mecom Intron
Rr574695 141 bp proximal
SNP C/G C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C G C C C C
rs236758752
MGI SNP Detail
Alliance Variant
Chr3:30035526 Mecom Intron
Rr574695 85 bp proximal
SNP G/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T G T T T T
rs29835038
MGI SNP Detail
Alliance Variant
Chr3:30035542 Mecom Intron
Rr574695 69 bp proximal
SNP A/C A A A A A A A A A C A A A A
rs580252193
MGI SNP Detail
Alliance Variant
Chr3:30035574 Mecom Intron
Rr574695 37 bp proximal
SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs583660162
MGI SNP Detail
Alliance Variant
Chr3:30035575 Mecom Intron
Rr574695 36 bp proximal
SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs259464440
MGI SNP Detail
Alliance Variant
Chr3:30035589 Mecom Intron
Rr574695 22 bp proximal
SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
SNP ID
(GRCm39)
Map Position
(GRCm39)
Gene & Category Variation
Type
Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PL/J
PWD/PhJ
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs234205709
MGI SNP Detail
Alliance Variant
Chr3:30035597 Mecom Intron
Rr574695 14 bp proximal
SNP C/T C C C C C C C C C C C C C C C C C C C C C C T C C C C T C C C C C T C C C C C C T C C C C C C C C C C C C
rs586964271
MGI SNP Detail
Alliance Variant
Chr3:30035598 Mecom Intron
Rr574695 13 bp proximal
SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs257687210
MGI SNP Detail
Alliance Variant
Chr3:30035641 Mecom Intron
Rr574695 within coordinates of
SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs217120062
MGI SNP Detail
Alliance Variant
Chr3:30035780 Mecom Intron
Rr574695 within coordinates of
SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs230490527
MGI SNP Detail
Alliance Variant
Chr3:30035912 Mecom Intron
Rr574695 within coordinates of
SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs244829144
MGI SNP Detail
Alliance Variant
Chr3:30035952 Mecom Intron
Rr574695 within coordinates of
SNP C/G C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C G C C C C
rs29835041
MGI SNP Detail
Alliance Variant
Chr3:30036025 Mecom Intron
Rr574695 62 bp distal
SNP A/C C C C C C C C C A C C A C
rs229701050
MGI SNP Detail
Alliance Variant
Chr3:30036028 Mecom Intron
Rr574695 65 bp distal
SNP A/T A A A A A A A A A A A A A A A A A A A T A A T A A A A T A A A A A T A A A A A A T A A A A A A A T A A A A
rs250085788
MGI SNP Detail
Alliance Variant
Chr3:30036230 Mecom Intron
Rr574695 267 bp distal
SNP A/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T A T T T T
rs29835324
MGI SNP Detail
Alliance Variant
Chr3:30036314 Mecom Intron
Rr574695 351 bp distal
SNP C/T C C C C C C T C C C T C C T C
rs240304929
MGI SNP Detail
Alliance Variant
Chr3:30036582 Mecom Intron
Rr574695 619 bp distal
SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs262866043
MGI SNP Detail
Alliance Variant
Chr3:30036598 Mecom Intron
Rr574695 635 bp distal
SNP A/C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C A C C C C
rs579665483
MGI SNP Detail
Alliance Variant
Chr3:30036647 Mecom Intron
Rr574695 684 bp distal
SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs224856419
MGI SNP Detail
Alliance Variant
Chr3:30036685 Mecom Intron
Rr574695 722 bp distal
SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs237411556
MGI SNP Detail
Alliance Variant
Chr3:30036692 Mecom Intron
Rr574695 729 bp distal
SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs250685884
MGI SNP Detail
Alliance Variant
Chr3:30036729 Mecom Intron
Rr574695 766 bp distal
SNP G/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T G T T T T
rs218099031
MGI SNP Detail
Alliance Variant
Chr3:30036755 Mecom Intron
Rr574695 792 bp distal
SNP A/G A A A A A A A A A A A A A A A A A A A G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A
rs236795504
MGI SNP Detail
Alliance Variant
Chr3:30036786 Mecom Intron
Rr574695 823 bp distal
SNP G/T T T T T T T T T T T T T T T T T T T T G T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T
rs259106108
MGI SNP Detail
Alliance Variant
Chr3:30036876 Mecom Intron
Rr574695 913 bp distal
SNP G/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T G T T T T
rs6157558
MGI SNP Detail
Alliance Variant
Chr3:30036898 Mecom Intron
Rr574695 935 bp distal
SNP A/C A C
rs245811202
MGI SNP Detail
Alliance Variant
Chr3:30036947 Mecom Intron
Rr574695 984 bp distal
SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs6158058
MGI SNP Detail
Alliance Variant
Chr3:30036952 Mecom Intron
Rr574695 989 bp distal
SNP A/G A A A A A A A A G A A A G A A G A
rs230398134
MGI SNP Detail
Alliance Variant
Chr3:30036972 Mecom Intron
Rr574695 1009 bp distal
SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs245961511
MGI SNP Detail
Alliance Variant
Chr3:30036996 Mecom Intron
Rr574695 1033 bp distal
SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs214208237
MGI SNP Detail
Alliance Variant
Chr3:30037000 Mecom Intron
Rr574695 1037 bp distal
SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
SNP ID
(GRCm39)
Map Position
(GRCm39)
Gene & Category Variation
Type
Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PL/J
PWD/PhJ
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs29835329
MGI SNP Detail
Alliance Variant
Chr3:30037014 Mecom Intron
Rr574695 1051 bp distal
SNP C/T T T T T T T T T T T T T T T C
rs244033736
MGI SNP Detail
Alliance Variant
Chr3:30037051 Mecom Intron
Rr574695 1088 bp distal
SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs29835332
MGI SNP Detail
Alliance Variant
Chr3:30037090 Mecom Intron
Rr574695 1127 bp distal
SNP C/T C C C C C C T C C C C C C
rs242608548
MGI SNP Detail
Alliance Variant
Chr3:30037131 Mecom Intron
Rr574695 1168 bp distal
SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs258664868
MGI SNP Detail
Alliance Variant
Chr3:30037134 Mecom Intron
Rr574695 1171 bp distal
SNP A/T A A A A A A A A A A A A A A A A A A A T A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A
rs217118193
MGI SNP Detail
Alliance Variant
Chr3:30037156 Mecom Intron
Rr574695 1193 bp distal
SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs29835515
MGI SNP Detail
Alliance Variant
Chr3:30037229 Mecom Intron
Rr574695 1266 bp distal
SNP C/T T T T T T T T T T C T T T T
rs29835518
MGI SNP Detail
Alliance Variant
Chr3:30037382 Mecom Intron
Rr574695 1419 bp distal
SNP A/G A A A A A A G G A G A A G G
rs250342187
MGI SNP Detail
Alliance Variant
Chr3:30037510 Mecom Intron
Rr574695 1547 bp distal
SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs217829009
MGI SNP Detail
Alliance Variant
Chr3:30037560 Mecom Intron
Rr574695 1597 bp distal
SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs236885080
MGI SNP Detail
Alliance Variant
Chr3:30037612 Mecom Intron
Rr574695 1649 bp distal
SNP A/G G G G G G G G G G G G G G G G G G G G A G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G
rs263826933
MGI SNP Detail
Alliance Variant
Chr3:30037686 Mecom Intron
Rr574695 1723 bp distal
SNP G/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T G T T T T
rs226850155
MGI SNP Detail
Alliance Variant
Chr3:30037731 Mecom Intron
Rr574695 1768 bp distal
SNP A/G A A A A A A A A A A A A A A A A A A A G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A
rs29835521
MGI SNP Detail
Alliance Variant
Chr3:30037750 Mecom Intron
Rr574695 1787 bp distal
SNP C/T C C C C C C C C C T C C T C
rs263839088
MGI SNP Detail
Alliance Variant
Chr3:30037771 Mecom Intron
Rr574695 1808 bp distal
SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs29835874
MGI SNP Detail
Alliance Variant
Chr3:30037783 Mecom Intron
Rr574695 1820 bp distal
SNP C/G C C C C C C G C C C G C C G G
rs240067140
MGI SNP Detail
Alliance Variant
Chr3:30037802 Mecom Intron
Rr574695 1839 bp distal
SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs29835877
MGI SNP Detail
Alliance Variant
Chr3:30037803 Mecom Intron
Rr574695 1840 bp distal
SNP A/G G G G G G G G G G G A G G A G
rs225199106
MGI SNP Detail
Alliance Variant
Chr3:30037886 Mecom Intron
Rr574695 1923 bp distal
SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs244067040
MGI SNP Detail
Alliance Variant
Chr3:30037925 Mecom Intron
Rr574695 1962 bp distal
SNP A/G A A A A A A A A A A A A A A A A A A A G A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A G A
<< first < prev1 next > last >>
Showing SNP(s) 1 - 70 of 70

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
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last database update
03/25/2025
MGI 6.24
The Jackson Laboratory