Rr574712 Mouse SNP Summary

Mouse SNP Summary

Symbol
Name
ID

Rr574712
regulatory region 574712
MGI:8036844

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Showing SNP(s) 1 - 58 of 58

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SNP ID (GRCm39)	Map Position (GRCm39)	Gene & Category	Variation Type	Allele Summary (all strains)	129P2/OlaHsd	129S1/SvImJ	129S5/SvEvBrd	129X1/SvJ	A/J	AKR/J	B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ	BALB/cByJ	BALB/cJ	BTBR T<+> Itpr3<tf>/J	BUB/BnJ	C3H/HeH	C3H/HeJ	C57BL/10J	C57BL/10SnJ	C57BL/6J	C57BL/6NJ	C57BR/cdJ	C57L/J	C58/J	CAST/EiJ	CBA/J	CE/J	CZECHII/EiJ	DBA/1J	DBA/2J	FVB/NJ	I/LnJ	JF1/MsJ	KK/HlJ	LEWES/EiJ	LG/J	LP/J	MA/MyJ	MOLF/EiJ	NOD/ShiLtJ	NON/ShiLtJ	NZB/BlNJ	NZO/HlLtJ	NZW/LacJ	PL/J	PWD/PhJ	PWK/PhJ	QSi3/Ianm	QSi5/Ianm	RF/J	RIIIS/J	SEA/GnJ	SJL/J	SM/J	SPRET/EiJ	ST/bJ	SWR/J	WSB/EiJ	ZALENDE/EiJ
rs580687279 MGI SNP Detail Alliance Variant	Chr3:30085680	Mecom Intron Mecom Noncoding-Transcript-Variant Rr574712 616 bp distal	SNP	A/G	G	G	G		G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	A	G	G	A	G	G	G	G	A	G	G	G	G	G	A	G	G	G	G	G	G		A	G	G	G	G	G	G	G	A	G	G	G
rs585189351 MGI SNP Detail Alliance Variant	Chr3:30085702	Mecom Intron Mecom Noncoding-Transcript-Variant Rr574712 638 bp distal	SNP	A/C	A	A	A		A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A		A	A	A	A	A	A	A	A	C	A	A	A	A
rs49563843 MGI SNP Detail Alliance Variant	Chr3:30085706	Mecom Intron Mecom Noncoding-Transcript-Variant Rr574712 642 bp distal	SNP	C/T	T	T	T		C	T	T	T	T	T	T		C	T	T	T	T	T	T	T	T	C	T	C	T	T	T	T	C	T	T	T	T	T	C	T	T	T	T	T	C		C	T	T	T	T	T	T	T	C	T	T	C
rs579144531 MGI SNP Detail Alliance Variant	Chr3:30085707	Mecom Intron Mecom Noncoding-Transcript-Variant Rr574712 643 bp distal	SNP	A/G	G	G	G		G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G		G	G	G	G	G	G	G	G	A	G	G	G	G
rs51532899 MGI SNP Detail Alliance Variant	Chr3:30085711	Mecom Intron Mecom Noncoding-Transcript-Variant Rr574712 647 bp distal	SNP	C/G		G			G	G		G		G			G								C					G	G			G						G				G														C
rs582507214 MGI SNP Detail Alliance Variant	Chr3:30085712	Mecom Intron Mecom Noncoding-Transcript-Variant Rr574712 648 bp distal	SNP	C/T	T	T	T		T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T		T	T	T	T	T	T	T	T	C	T	T	T	T
rs255789209 MGI SNP Detail Alliance Variant	Chr3:30085720	Mecom Intron Mecom Noncoding-Transcript-Variant Rr574712 656 bp distal	SNP	A/G	A	A	A		A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A		A	A	A	A	A	A	A	A	G	A	A	A	A
rs226421796 MGI SNP Detail Alliance Variant	Chr3:30085740	Mecom Intron Mecom Noncoding-Transcript-Variant Rr574712 676 bp distal	SNP	A/T	T	T	T		T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T		T	T	T	T	T	T	T	T	A	T	T	T	T
rs236171077 MGI SNP Detail Alliance Variant	Chr3:30085775	Mecom Intron Mecom Noncoding-Transcript-Variant Rr574712 711 bp distal	SNP	A/G	G	G	G		G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G		G	G	G	G	G	G	G	G	A	G	G	G	G
rs47396994 MGI SNP Detail Alliance Variant	Chr3:30085810	Mecom Intron Mecom Noncoding-Transcript-Variant Rr574712 746 bp distal	SNP	A/T		A			A	A		A		A			A								T					A	A			A					T	A				A		T												A
rs48435670 MGI SNP Detail Alliance Variant	Chr3:30085862	Mecom Intron Mecom Noncoding-Transcript-Variant Rr574712 798 bp distal	SNP	A/G		A			A	A		A		A			A								A					A	A			A					G	A				A		A												A
rs47018850 MGI SNP Detail Alliance Variant	Chr3:30085902	Mecom Intron Mecom Noncoding-Transcript-Variant Rr574712 838 bp distal	SNP	A/G		A			G	A				A			G								G					A	A			A					A	A				A		A												G
rs253718217 MGI SNP Detail Alliance Variant	Chr3:30085931	Mecom Intron Mecom Noncoding-Transcript-Variant Rr574712 867 bp distal	SNP	C/T	T	T	T		T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T		T	T	T	T	T	T	T	T	C	T	T	T	T
rs218749161 MGI SNP Detail Alliance Variant	Chr3:30085956	Mecom Intron Mecom Noncoding-Transcript-Variant Rr574712 892 bp distal	SNP	G/T	T	T	T		T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T		T	T	T	T	T	T	T	T	G	T	T	T	T
rs227021472 MGI SNP Detail Alliance Variant	Chr3:30085971	Mecom Intron Mecom Noncoding-Transcript-Variant Rr574712 907 bp distal	SNP	C/T	T	T	T		T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T		C	T	T	T	T	T	T	T	T	T	T	T	T
rs246926400 MGI SNP Detail Alliance Variant	Chr3:30085975	Mecom Intron Mecom Noncoding-Transcript-Variant Rr574712 911 bp distal	SNP	A/C	C	C	C		C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C		A	C	C	C	C	C	C	C	C	C	C	C	C
rs213639300 MGI SNP Detail Alliance Variant	Chr3:30086058	Mecom Intron Mecom Noncoding-Transcript-Variant Rr574712 994 bp distal	SNP	A/G	G	G	G		G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	A	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G		G	G	G	G	G	G	G	G	G	G	G	G	G
rs232718946 MGI SNP Detail Alliance Variant	Chr3:30086063	Mecom Intron Mecom Noncoding-Transcript-Variant Rr574712 999 bp distal	SNP	C/G	G	G	G		G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G		G	G	G	G	G	G	G	G	C	G	G	G	G
rs249484150 MGI SNP Detail Alliance Variant	Chr3:30086066	Mecom Intron Mecom Noncoding-Transcript-Variant Rr574712 1002 bp distal	SNP	A/T	A	A	A		A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A		A	A	A	A	A	A	A	A	T	A	A	A	A
rs48476902 MGI SNP Detail Alliance Variant	Chr3:30086072	Mecom Intron Mecom Noncoding-Transcript-Variant Rr574712 1008 bp distal	SNP	A/G					G																					A
rs242350278 MGI SNP Detail Alliance Variant	Chr3:30086095	Mecom Intron Mecom Noncoding-Transcript-Variant Rr574712 1031 bp distal	SNP	A/C	C	C	C		C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C		C	C	C	C	C	C	C	C	A	C	C	C	C
rs261007982 MGI SNP Detail Alliance Variant	Chr3:30086171	Mecom Intron Mecom Noncoding-Transcript-Variant Rr574712 1107 bp distal	SNP	A/T	T	T	T		T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T		T	T	T	T	T	T	T	T	A	T	T	T	T
rs224328923 MGI SNP Detail Alliance Variant	Chr3:30086201	Mecom Intron Mecom Noncoding-Transcript-Variant Rr574712 1137 bp distal	SNP	A/G	G	G	G		G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G		G	G	G	G	G	G	G	G	A	G	G	G	G
rs47204622 MGI SNP Detail Alliance Variant	Chr3:30086216	Mecom Intron Mecom Noncoding-Transcript-Variant Rr574712 1152 bp distal	SNP	A/T		A			T	A				A			T								A					A	A			A					A	A				A		T												T
rs50811007 MGI SNP Detail Alliance Variant	Chr3:30086240	Mecom Intron Mecom Noncoding-Transcript-Variant Rr574712 1176 bp distal	SNP	C/T		T			C	T		T		T			C								T					T	T			T					T	T				T		T												C
SNP ID (GRCm39)	Map Position (GRCm39)	Gene & Category	Variation Type	Allele Summary (all strains)	129P2/OlaHsd	129S1/SvImJ	129S5/SvEvBrd	129X1/SvJ	A/J	AKR/J	B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ	BALB/cByJ	BALB/cJ	BTBR T<+> Itpr3<tf>/J	BUB/BnJ	C3H/HeH	C3H/HeJ	C57BL/10J	C57BL/10SnJ	C57BL/6J	C57BL/6NJ	C57BR/cdJ	C57L/J	C58/J	CAST/EiJ	CBA/J	CE/J	CZECHII/EiJ	DBA/1J	DBA/2J	FVB/NJ	I/LnJ	JF1/MsJ	KK/HlJ	LEWES/EiJ	LG/J	LP/J	MA/MyJ	MOLF/EiJ	NOD/ShiLtJ	NON/ShiLtJ	NZB/BlNJ	NZO/HlLtJ	NZW/LacJ	PL/J	PWD/PhJ	PWK/PhJ	QSi3/Ianm	QSi5/Ianm	RF/J	RIIIS/J	SEA/GnJ	SJL/J	SM/J	SPRET/EiJ	ST/bJ	SWR/J	WSB/EiJ	ZALENDE/EiJ
rs6243518 MGI SNP Detail Alliance Variant	Chr3:30086290	Mecom Intron Mecom Noncoding-Transcript-Variant Rr574712 1226 bp distal	SNP	C/T		T		T	C	T		T		T			C			T					C			C		T	T			T					C	T				T		C												C
rs6243554 MGI SNP Detail Alliance Variant	Chr3:30086316	Mecom Intron Mecom Noncoding-Transcript-Variant Rr574712 1252 bp distal	SNP	A/T																T								A
rs52429186 MGI SNP Detail Alliance Variant	Chr3:30086332	Mecom Intron Mecom Noncoding-Transcript-Variant Rr574712 1268 bp distal	SNP	C/T		T		T	C	T		T		T			C								T					T	T			T					T	T				T		T												C
rs6244160 MGI SNP Detail Alliance Variant	Chr3:30086422	Mecom Intron Mecom Noncoding-Transcript-Variant Rr574712 1358 bp distal	SNP	A/C				A	C											A								C		A
rs52287678 MGI SNP Detail Alliance Variant	Chr3:30086427	Mecom Intron Mecom Noncoding-Transcript-Variant Rr574712 1363 bp distal	SNP	A/G				G	A																					G
rs6244202 MGI SNP Detail Alliance Variant	Chr3:30086440	Mecom Intron Mecom Noncoding-Transcript-Variant Rr574712 1376 bp distal	SNP	C/T																C								T
rs6244204 MGI SNP Detail Alliance Variant	Chr3:30086441	Mecom Intron Mecom Noncoding-Transcript-Variant Rr574712 1377 bp distal	SNP	A/C																C								A
rs227099933 MGI SNP Detail Alliance Variant	Chr3:30086475	Mecom Intron Mecom Noncoding-Transcript-Variant Rr574712 1411 bp distal	SNP	A/G	A	A	A		A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A		A	A	A	A	A	A	A	A	G	A	A	A	A
rs6244691 MGI SNP Detail Alliance Variant	Chr3:30086494	Mecom Intron Mecom Noncoding-Transcript-Variant Rr574712 1430 bp distal	SNP	A/T		A		A	T	A		A		A			T			A					T			T		A	A			A					A	A				A		A												T
rs6244693 MGI SNP Detail Alliance Variant	Chr3:30086496	Mecom Intron Mecom Noncoding-Transcript-Variant Rr574712 1432 bp distal	SNP	C/T		C			C	C		C		C			C			C					C			T		C	C			C					T	C				C		C												C
rs29808252 MGI SNP Detail Alliance Variant	Chr3:30086523	Mecom Intron Mecom Noncoding-Transcript-Variant Rr574712 1459 bp distal	SNP	A/G		A			A	A		A		A			A								G					A	A			A					A	A				A		G												A
rs6244763 MGI SNP Detail Alliance Variant	Chr3:30086535	Mecom Intron Mecom Noncoding-Transcript-Variant Rr574712 1471 bp distal	SNP	C/G		C			C	C		C		C			C			C					C			G		C	C			C					G	C				C		C												C
rs226578538 MGI SNP Detail Alliance Variant	Chr3:30086575	Mecom Intron Mecom Noncoding-Transcript-Variant Rr574712 1511 bp distal	SNP	G/T	G	G	G		G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G		G	G	G	G	G	G	G	G	T	G	G	G	G
rs6245282 MGI SNP Detail Alliance Variant	Chr3:30086604	Mecom Intron Mecom Noncoding-Transcript-Variant Rr574712 1540 bp distal	SNP	A/G		A		A	G	A		A		A			G			A					A			G		A	A			A					G	A				A		G												G
rs29808251 MGI SNP Detail Alliance Variant	Chr3:30086636	Mecom Intron Mecom Noncoding-Transcript-Variant Rr574712 1572 bp distal	SNP	A/G		G		G	A	G		G		G			A								A					G	G			G					G	G				G		A												A
rs29808250 MGI SNP Detail Alliance Variant	Chr3:30086683	Mecom Intron Mecom Noncoding-Transcript-Variant Rr574712 1619 bp distal	SNP	A/C		C			C	C		C		C			C								A					C	C			C					C	C				C		C												C
rs264132433 MGI SNP Detail Alliance Variant	Chr3:30086701	Mecom Intron Mecom Noncoding-Transcript-Variant Rr574712 1637 bp distal	SNP	C/T	C	C	C		C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C		C	C	C	C	C	C	C	C	T	C	C	C	C
rs578957355 MGI SNP Detail Alliance Variant	Chr3:30086779	Mecom Intron Mecom Noncoding-Transcript-Variant Rr574712 1715 bp distal	SNP	C/T	C	C	C		C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C		C	C	C	C	C	C	C	C	T	C	C	C	C
rs29808249 MGI SNP Detail Alliance Variant	Chr3:30086788	Mecom Intron Mecom Noncoding-Transcript-Variant Rr574712 1724 bp distal	SNP	C/G		C		C	G	C		C		C			G								C					C	C			C					C	C				C		G
rs46795518 MGI SNP Detail Alliance Variant	Chr3:30086795	Mecom Intron Mecom Noncoding-Transcript-Variant Rr574712 1731 bp distal	SNP	C/T				C	T																					C
rs29808248 MGI SNP Detail Alliance Variant	Chr3:30086836	Mecom Intron Mecom Noncoding-Transcript-Variant Rr574712 1772 bp distal	SNP	C/T		C		C	T	C		C		C			T								T					C	C			C					C	C				C		C												T
rs29808247 MGI SNP Detail Alliance Variant	Chr3:30086877	Mecom Intron Mecom Noncoding-Transcript-Variant Rr574712 1813 bp distal	SNP	A/C		C			C	C		C		C			C								C					C	C			C					C	C				C		A												C
rs29808246 MGI SNP Detail Alliance Variant	Chr3:30086893	Mecom Intron Mecom Noncoding-Transcript-Variant Rr574712 1829 bp distal	SNP	C/T		T		T	C	T		T		T			C								C					T	T			T					T	T				T		C												C
rs29808245 MGI SNP Detail Alliance Variant	Chr3:30086913	Mecom Intron Mecom Noncoding-Transcript-Variant Rr574712 1849 bp distal	SNP	A/C		A		A	C	A		A		A			C								A					A	A			A					A	A				A		A												C
rs108234840 MGI SNP Detail Alliance Variant	Chr3:30086945	Mecom Intron Mecom Noncoding-Transcript-Variant Rr574712 1881 bp distal	SNP	C/T				C	T																					C
SNP ID (GRCm39)	Map Position (GRCm39)	Gene & Category	Variation Type	Allele Summary (all strains)	129P2/OlaHsd	129S1/SvImJ	129S5/SvEvBrd	129X1/SvJ	A/J	AKR/J	B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ	BALB/cByJ	BALB/cJ	BTBR T<+> Itpr3<tf>/J	BUB/BnJ	C3H/HeH	C3H/HeJ	C57BL/10J	C57BL/10SnJ	C57BL/6J	C57BL/6NJ	C57BR/cdJ	C57L/J	C58/J	CAST/EiJ	CBA/J	CE/J	CZECHII/EiJ	DBA/1J	DBA/2J	FVB/NJ	I/LnJ	JF1/MsJ	KK/HlJ	LEWES/EiJ	LG/J	LP/J	MA/MyJ	MOLF/EiJ	NOD/ShiLtJ	NON/ShiLtJ	NZB/BlNJ	NZO/HlLtJ	NZW/LacJ	PL/J	PWD/PhJ	PWK/PhJ	QSi3/Ianm	QSi5/Ianm	RF/J	RIIIS/J	SEA/GnJ	SJL/J	SM/J	SPRET/EiJ	ST/bJ	SWR/J	WSB/EiJ	ZALENDE/EiJ
rs29808244 MGI SNP Detail Alliance Variant	Chr3:30086959	Mecom Intron Mecom Noncoding-Transcript-Variant Rr574712 1895 bp distal	SNP	C/T		C			C	C		C		C			C								C					C	C			C					T	C				C		C												C
rs582389979 MGI SNP Detail Alliance Variant	Chr3:30086960	Mecom Intron Mecom Noncoding-Transcript-Variant Rr574712 1896 bp distal	SNP	G/T	G	G	G		T	G	G	G	G	G	G	T	T	G	G	G	G	G	G	G	G	T	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	T		G	G	G	G	G	G	G	G	G	G	G	T	T
rs226605654 MGI SNP Detail Alliance Variant	Chr3:30086964	Mecom Intron Mecom Noncoding-Transcript-Variant Rr574712 1900 bp distal	SNP	A/G	G	G	G		G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G		G	G	G	G	G	G	G	G	A	G	G	G	G
rs248658030 MGI SNP Detail Alliance Variant	Chr3:30086972	Mecom Intron Mecom Noncoding-Transcript-Variant Rr574712 1908 bp distal	SNP	A/G	G	G	G		G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G		G	G	G	G	G	G	G	G	A	G	G	G	G
rs29807303 MGI SNP Detail Alliance Variant	Chr3:30087033	Mecom Intron Mecom Noncoding-Transcript-Variant Rr574712 1969 bp distal	SNP	C/G		C		C	G	C		C		C			G								C					C	C			C					C	C				C		G												G
rs220821472 MGI SNP Detail Alliance Variant	Chr3:30087037	Mecom Intron Mecom Noncoding-Transcript-Variant Rr574712 1973 bp distal	SNP	A/G	G	G	G		G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G		G	G	G	G	G	G	G	G	A	G	G	G	G
rs29807302 MGI SNP Detail Alliance Variant	Chr3:30087045	Mecom Intron Mecom Noncoding-Transcript-Variant Rr574712 1981 bp distal	SNP	G/T		T			T	T		T		T			T								T					T	T			T					T	T				T		G												T
rs29807301 MGI SNP Detail Alliance Variant	Chr3:30087047	Mecom Intron Mecom Noncoding-Transcript-Variant Rr574712 1983 bp distal	SNP	C/T		C		C	T	C		C		C			T								C					C	C			C					C	C				C		C												T

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Contributing Projects: Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
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