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Mouse SNP Summary
Symbol
Name
ID 		Rr574727
regulatory region 574727
MGI:8036859

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SNP ID
(GRCm39)		 Map Position
(GRCm39)		 Gene & Category Variation
Type		 Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
129X1/SvJ
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BLKS/J
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
DDK/Pas
FVB/NJ
I/LnJ
JF1/Ms
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MAI/Pas
MA/MyJ
MOLF/EiJ
MSM/Ms
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PERA/EiJ
PL/J
PWD/Ph
PWD/PhJ
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SEG/Pas
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs216492651
MGI SNP Detail
Alliance Variant		 Chr3:30200991 Mecom Intron
Mecom Noncoding-Transcript-Variant
Rr574727 1924 bp proximal
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs240066238
MGI SNP Detail
Alliance Variant		 Chr3:30200999 Mecom Intron
Mecom Noncoding-Transcript-Variant
Rr574727 1916 bp proximal
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G A G G G G G G G G G G G G G G G G G A G G G G G G G G G G G G
rs262732828
MGI SNP Detail
Alliance Variant		 Chr3:30201006 Mecom Intron
Mecom Noncoding-Transcript-Variant
Rr574727 1909 bp proximal
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs29814869
MGI SNP Detail
Alliance Variant		 Chr3:30201075 Mecom Intron
Mecom Noncoding-Transcript-Variant
Rr574727 1840 bp proximal
 SNP G/T T T T T T T T T T G T T G T
rs29814868
MGI SNP Detail
Alliance Variant		 Chr3:30201330 Mecom Intron
Mecom Noncoding-Transcript-Variant
Rr574727 1585 bp proximal
 SNP A/G G A G G A G G G A G G G
rs50405859
MGI SNP Detail
Alliance Variant		 Chr3:30201333 Mecom Intron
Mecom Noncoding-Transcript-Variant
Rr574727 1582 bp proximal
 SNP A/G A G
rs217901181
MGI SNP Detail
Alliance Variant		 Chr3:30201358 Mecom Intron
Mecom Noncoding-Transcript-Variant
Rr574727 1557 bp proximal
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs236594566
MGI SNP Detail
Alliance Variant		 Chr3:30201407 Mecom Intron
Mecom Noncoding-Transcript-Variant
Rr574727 1508 bp proximal
 SNP A/C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C A C C C C
rs6199206
MGI SNP Detail
Alliance Variant		 Chr3:30201467 Mecom Intron
Mecom Noncoding-Transcript-Variant
Rr574727 1448 bp proximal
 SNP A/C/G G G G G G G G A C G G G G
rs582286734
MGI SNP Detail
Alliance Variant		 Chr3:30201535 Mecom Intron
Mecom Noncoding-Transcript-Variant
Rr574727 1380 bp proximal
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs585718028
MGI SNP Detail
Alliance Variant		 Chr3:30201539 Mecom Intron
Mecom Noncoding-Transcript-Variant
Rr574727 1376 bp proximal
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs6199772
MGI SNP Detail
Alliance Variant		 Chr3:30201590 Mecom Intron
Mecom Noncoding-Transcript-Variant
Rr574727 1325 bp proximal
 SNP A/G A G
rs6199774
MGI SNP Detail
Alliance Variant		 Chr3:30201593 Mecom Intron
Mecom Noncoding-Transcript-Variant
Rr574727 1322 bp proximal
 SNP A/G A A A A A A A G G A A G A A G
rs265745356
MGI SNP Detail
Alliance Variant		 Chr3:30201639 Mecom Intron
Mecom Noncoding-Transcript-Variant
Rr574727 1276 bp proximal
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs6200253
MGI SNP Detail
Alliance Variant		 Chr3:30201646 Mecom Intron
Mecom Noncoding-Transcript-Variant
Rr574727 1269 bp proximal
 SNP C/G G G G G G G G C C G G C G G C G
rs245761701
MGI SNP Detail
Alliance Variant		 Chr3:30201714 Mecom Intron
Mecom Noncoding-Transcript-Variant
Rr574727 1201 bp proximal
 SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs6200754
MGI SNP Detail
Alliance Variant		 Chr3:30201725 Mecom Intron
Mecom Noncoding-Transcript-Variant
Rr574727 1190 bp proximal
 SNP A/T T T A A T T T A T T T T T T A A T A T T T T T A T T T A T A A T T T T A A A A T T A T T A T T T A
rs29814867
MGI SNP Detail
Alliance Variant		 Chr3:30201816 Mecom Intron
Mecom Noncoding-Transcript-Variant
Rr574727 1099 bp proximal
 SNP G/T T T T T T T G T T T T T T
rs579709317
MGI SNP Detail
Alliance Variant		 Chr3:30201838 Mecom Intron
Mecom Noncoding-Transcript-Variant
Rr574727 1077 bp proximal
 SNP C/G C C C C C C C C C C C C C C C C C C C G C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C
rs248308397
MGI SNP Detail
Alliance Variant		 Chr3:30201896 Mecom Intron
Mecom Noncoding-Transcript-Variant
Rr574727 1019 bp proximal
 SNP A/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T A T T T T
rs29814866
MGI SNP Detail
Alliance Variant		 Chr3:30201930 Mecom Intron
Mecom Noncoding-Transcript-Variant
Rr574727 985 bp proximal
 SNP C/T C C C C C C T C C C C C C C
rs29814865
MGI SNP Detail
Alliance Variant		 Chr3:30201963 Mecom Intron
Mecom Noncoding-Transcript-Variant
Rr574727 952 bp proximal
 SNP C/G G G G G G G C G G G G G G G
rs242844605
MGI SNP Detail
Alliance Variant		 Chr3:30201964 Mecom Intron
Mecom Noncoding-Transcript-Variant
Rr574727 951 bp proximal
 SNP A/G A A A A A A A A A A A A A A A A A A A G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A
rs258417563
MGI SNP Detail
Alliance Variant		 Chr3:30202086 Mecom Intron
Mecom Noncoding-Transcript-Variant
Rr574727 829 bp proximal
 SNP A/C C C C C C C C C C C C C C C C C C C C A C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C
rs29814864
MGI SNP Detail
Alliance Variant		 Chr3:30202096 Mecom Intron
Mecom Noncoding-Transcript-Variant
Rr574727 819 bp proximal
 SNP C/T T T T T T T C C T T C T T C
SNP ID
(GRCm39)		 Map Position
(GRCm39)		 Gene & Category Variation
Type		 Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
129X1/SvJ
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BLKS/J
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
DDK/Pas
FVB/NJ
I/LnJ
JF1/Ms
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MAI/Pas
MA/MyJ
MOLF/EiJ
MSM/Ms
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PERA/EiJ
PL/J
PWD/Ph
PWD/PhJ
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SEG/Pas
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs235880305
MGI SNP Detail
Alliance Variant		 Chr3:30202176 Mecom Intron
Mecom Noncoding-Transcript-Variant
Rr574727 739 bp proximal
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs250151167
MGI SNP Detail
Alliance Variant		 Chr3:30202193 Mecom Intron
Mecom Noncoding-Transcript-Variant
Rr574727 722 bp proximal
 SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs217961028
MGI SNP Detail
Alliance Variant		 Chr3:30202219 Mecom Intron
Mecom Noncoding-Transcript-Variant
Rr574727 696 bp proximal
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs236649655
MGI SNP Detail
Alliance Variant		 Chr3:30202254 Mecom Intron
Mecom Noncoding-Transcript-Variant
Rr574727 661 bp proximal
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs252564233
MGI SNP Detail
Alliance Variant		 Chr3:30202297 Mecom Intron
Mecom Noncoding-Transcript-Variant
Rr574727 618 bp proximal
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs226554774
MGI SNP Detail
Alliance Variant		 Chr3:30202303 Mecom Intron
Mecom Noncoding-Transcript-Variant
Rr574727 612 bp proximal
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G A G G G G A G G G G G A G G G G G G A G G G G G G G G G G G G
rs248061156
MGI SNP Detail
Alliance Variant		 Chr3:30202384 Mecom Intron
Mecom Noncoding-Transcript-Variant
Rr574727 531 bp proximal
 SNP C/T T T T T T T T T T T T T T T T T T T T C T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T
rs263721154
MGI SNP Detail
Alliance Variant		 Chr3:30202409 Mecom Intron
Mecom Noncoding-Transcript-Variant
Rr574727 506 bp proximal
 SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs222255192
MGI SNP Detail
Alliance Variant		 Chr3:30202516 Mecom Intron
Mecom Noncoding-Transcript-Variant
Rr574727 399 bp proximal
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs239811063
MGI SNP Detail
Alliance Variant		 Chr3:30202518 Mecom Intron
Mecom Noncoding-Transcript-Variant
Rr574727 397 bp proximal
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs29813923
MGI SNP Detail
Alliance Variant		 Chr3:30202565 Mecom Intron
Mecom Noncoding-Transcript-Variant
Rr574727 350 bp proximal
 SNP C/T C C C C C C T C C C C C C C
rs29813922
MGI SNP Detail
Alliance Variant		 Chr3:30202590 Mecom Intron
Mecom Noncoding-Transcript-Variant
Rr574727 325 bp proximal
 SNP C/T C C C C C C C C C T C C T C
rs248373960
MGI SNP Detail
Alliance Variant		 Chr3:30202628 Mecom Intron
Mecom Noncoding-Transcript-Variant
Rr574727 287 bp proximal
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs266226999
MGI SNP Detail
Alliance Variant		 Chr3:30202636 Mecom Intron
Mecom Noncoding-Transcript-Variant
Rr574727 279 bp proximal
 SNP A/C A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A C A A A A
rs29813921
MGI SNP Detail
Alliance Variant		 Chr3:30202645 Mecom Intron
Mecom Noncoding-Transcript-Variant
Rr574727 270 bp proximal
 SNP C/T C C C C C C T C C C C C C C
rs258545641
MGI SNP Detail
Alliance Variant		 Chr3:30202661 Mecom Intron
Mecom Noncoding-Transcript-Variant
Rr574727 254 bp proximal
 SNP C/T T T T T T T T T T T T T T T T T T T T T T T C T T T T C T T T T T C T T T T T T C T T T T T T T C T T T T
rs29813920
MGI SNP Detail
Alliance Variant		 Chr3:30202671 Mecom Intron
Mecom Noncoding-Transcript-Variant
Rr574727 244 bp proximal
 SNP C/T T T T T T T T T T C T T T
rs237741169
MGI SNP Detail
Alliance Variant		 Chr3:30202722 Mecom Intron
Mecom Noncoding-Transcript-Variant
Rr574727 193 bp proximal
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs244307080
MGI SNP Detail
Alliance Variant		 Chr3:30202928 Mecom Intron
Mecom Noncoding-Transcript-Variant
Rr574727 within coordinates of
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs211718908
MGI SNP Detail
Alliance Variant		 Chr3:30202948 Mecom Intron
Mecom Noncoding-Transcript-Variant
Rr574727 within coordinates of
 SNP C/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G C G G G G
rs230740617
MGI SNP Detail
Alliance Variant		 Chr3:30203083 Mecom Intron
Mecom Noncoding-Transcript-Variant
Rr574727 within coordinates of
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs29813919
MGI SNP Detail
Alliance Variant		 Chr3:30203101 Mecom Intron
Mecom Noncoding-Transcript-Variant
Rr574727 within coordinates of
 SNP C/T T T T T T T T T T C T T C T
rs29813918
MGI SNP Detail
Alliance Variant		 Chr3:30203126 Mecom Intron
Mecom Noncoding-Transcript-Variant
Rr574727 25 bp distal
 SNP A/G G G A A G G A G G G G G G G G G
rs237754447
MGI SNP Detail
Alliance Variant		 Chr3:30203180 Mecom Intron
Mecom Noncoding-Transcript-Variant
Rr574727 79 bp distal
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs263259117
MGI SNP Detail
Alliance Variant		 Chr3:30203339 Mecom Intron
Mecom Noncoding-Transcript-Variant
Rr574727 238 bp distal
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
SNP ID
(GRCm39)		 Map Position
(GRCm39)		 Gene & Category Variation
Type		 Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
129X1/SvJ
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BLKS/J
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
DDK/Pas
FVB/NJ
I/LnJ
JF1/Ms
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MAI/Pas
MA/MyJ
MOLF/EiJ
MSM/Ms
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PERA/EiJ
PL/J
PWD/Ph
PWD/PhJ
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SEG/Pas
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs29813917
MGI SNP Detail
Alliance Variant		 Chr3:30203342 Mecom Intron
Mecom Noncoding-Transcript-Variant
Rr574727 241 bp distal
 SNP C/G C C C C C C G C C G C C G C
rs239870314
MGI SNP Detail
Alliance Variant		 Chr3:30203362 Mecom Intron
Mecom Noncoding-Transcript-Variant
Rr574727 261 bp distal
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs29813916
MGI SNP Detail
Alliance Variant		 Chr3:30203364 Mecom Intron
Mecom Noncoding-Transcript-Variant
Rr574727 263 bp distal
 SNP C/T C C T T C C T C C C C C C C C C
rs218924523
MGI SNP Detail
Alliance Variant		 Chr3:30203366 Mecom Intron
Mecom Noncoding-Transcript-Variant
Rr574727 265 bp distal
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs29813915
MGI SNP Detail
Alliance Variant		 Chr3:30203457 Mecom Intron
Mecom Noncoding-Transcript-Variant
Rr574727 356 bp distal
 SNP A/G G G G G G G A G G G G G G G
rs29813914
MGI SNP Detail
Alliance Variant		 Chr3:30203544 Mecom Intron
Mecom Noncoding-Transcript-Variant
Rr574727 443 bp distal
 SNP A/G A A A A A A A A A G A A G A
rs232548431
MGI SNP Detail
Alliance Variant		 Chr3:30203545 Mecom Intron
Mecom Noncoding-Transcript-Variant
Rr574727 444 bp distal
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C T C C C C T C C C C C T C C C C C C T C C C C C C C C C C C C
rs29812933
MGI SNP Detail
Alliance Variant		 Chr3:30203550 Mecom Intron
Mecom Noncoding-Transcript-Variant
Rr574727 449 bp distal
 SNP C/T T T T T T T C T T T T T
rs29812932
MGI SNP Detail
Alliance Variant		 Chr3:30203580 Mecom Intron
Mecom Noncoding-Transcript-Variant
Rr574727 479 bp distal
 SNP A/G G G G G G G A G G G G G G G
rs225070100
MGI SNP Detail
Alliance Variant		 Chr3:30203633 Mecom Intron
Mecom Noncoding-Transcript-Variant
Rr574727 532 bp distal
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs244361620
MGI SNP Detail
Alliance Variant		 Chr3:30203657 Mecom Intron
Mecom Noncoding-Transcript-Variant
Rr574727 556 bp distal
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs211781267
MGI SNP Detail
Alliance Variant		 Chr3:30203679 Mecom Intron
Mecom Noncoding-Transcript-Variant
Rr574727 578 bp distal
 SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs230430562
MGI SNP Detail
Alliance Variant		 Chr3:30203747 Mecom Intron
Mecom Noncoding-Transcript-Variant
Rr574727 646 bp distal
 SNP A/C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C A C C C C
rs258792855
MGI SNP Detail
Alliance Variant		 Chr3:30203765 Mecom Intron
Mecom Noncoding-Transcript-Variant
Rr574727 664 bp distal
 SNP A/C C C C C C C C C C C C C C C C C C C C A C C C C C C C C C C C C C C C C C C C C C C C C C C C C A C C C C
rs219192842
MGI SNP Detail
Alliance Variant		 Chr3:30203827 Mecom Intron
Mecom Noncoding-Transcript-Variant
Rr574727 726 bp distal
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs239899060
MGI SNP Detail
Alliance Variant		 Chr3:30203829 Mecom Intron
Mecom Noncoding-Transcript-Variant
Rr574727 728 bp distal
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs29812931
MGI SNP Detail
Alliance Variant		 Chr3:30204036 Mecom Intron
Mecom Noncoding-Transcript-Variant
Rr574727 935 bp distal
 SNP C/T T T T T T T C T T T T T T T T
rs581888829
MGI SNP Detail
Alliance Variant		 Chr3:30204040 Mecom Intron
Mecom Noncoding-Transcript-Variant
Rr574727 939 bp distal
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs29812930
MGI SNP Detail
Alliance Variant		 Chr3:30204176 Mecom Intron
Mecom Noncoding-Transcript-Variant
Rr574727 1075 bp distal
 SNP A/C C C C C C C A C C A C C C
rs233124682
MGI SNP Detail
Alliance Variant		 Chr3:30204184 Mecom Intron
Mecom Noncoding-Transcript-Variant
Rr574727 1083 bp distal
 SNP A/C C C C C C C C C C C C C C C C C C C C A C C A C C C C A C C C C C A C C C C C C A C C C C C C C A C C C C
rs29812929
MGI SNP Detail
Alliance Variant		 Chr3:30204205 Mecom Intron
Mecom Noncoding-Transcript-Variant
Rr574727 1104 bp distal
 SNP A/G G G G G G G G G G A G G A G
rs29812928
MGI SNP Detail
Alliance Variant		 Chr3:30204218 Mecom Intron
Mecom Noncoding-Transcript-Variant
Rr574727 1117 bp distal
 SNP C/T C T T C C T C C C C C C C C C
rs242092680
MGI SNP Detail
Alliance Variant		 Chr3:30204301 Mecom Intron
Mecom Noncoding-Transcript-Variant
Rr574727 1200 bp distal
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs29812927
MGI SNP Detail
Alliance Variant		 Chr3:30204363 Mecom Intron
Mecom Noncoding-Transcript-Variant
Rr574727 1262 bp distal
 SNP A/G G G G G G G A G G A G G A G
rs224598479
MGI SNP Detail
Alliance Variant		 Chr3:30204398 Mecom Intron
Mecom Noncoding-Transcript-Variant
Rr574727 1297 bp distal
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
SNP ID
(GRCm39)		 Map Position
(GRCm39)		 Gene & Category Variation
Type		 Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
129X1/SvJ
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BLKS/J
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
DDK/Pas
FVB/NJ
I/LnJ
JF1/Ms
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MAI/Pas
MA/MyJ
MOLF/EiJ
MSM/Ms
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PERA/EiJ
PL/J
PWD/Ph
PWD/PhJ
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SEG/Pas
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs249591457
MGI SNP Detail
Alliance Variant		 Chr3:30204580 Mecom Intron
Mecom Noncoding-Transcript-Variant
Rr574727 1479 bp distal
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs262536625
MGI SNP Detail
Alliance Variant		 Chr3:30204670 Mecom Intron
Mecom Noncoding-Transcript-Variant
Rr574727 1569 bp distal
 SNP G/T G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G T G G G G
rs29812926
MGI SNP Detail
Alliance Variant		 Chr3:30205007 Mecom Intron
Mecom Noncoding-Transcript-Variant
Rr574727 1906 bp distal
 SNP C/T T T T T T T T T T C T T C T
rs236105761
MGI SNP Detail
Alliance Variant		 Chr3:30205008 Mecom Intron
Mecom Noncoding-Transcript-Variant
Rr574727 1907 bp distal
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G A G G G G G G G G G G G G G G G G G A G G G G G G G G G G G G
rs29812925
MGI SNP Detail
Alliance Variant		 Chr3:30205093 Mecom Intron
Mecom Noncoding-Transcript-Variant
Rr574727 1992 bp distal
 SNP C/G C C C C C C G C C C C C C C
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Showing SNP(s) 1 - 80 of 80
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
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Send questions and comments to User Support. 		last database update
03/18/2025
MGI 6.24 		The Jackson Laboratory