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Mouse SNP Summary
Symbol
Name
ID
Rr574752
regulatory region 574752
MGI:8036884

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SNP ID
(GRCm39)
Map Position
(GRCm39)
Gene & Category Variation
Type
Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
129X1/SvJ
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
MSM/Ms
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PL/J
PWD/PhJ
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs29812134
MGI SNP Detail
Alliance Variant
Chr3:30396373 Mecom Intron
Mecom Noncoding-Transcript-Variant
Rr574752 1991 bp proximal
SNP C/T C C C C C C C C C C T C C C C
rs216158876
MGI SNP Detail
Alliance Variant
Chr3:30396404 Mecom Intron
Mecom Noncoding-Transcript-Variant
Rr574752 1960 bp proximal
SNP A/T A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A T A A A A
rs232165833
MGI SNP Detail
Alliance Variant
Chr3:30396437 Mecom Intron
Mecom Noncoding-Transcript-Variant
Rr574752 1927 bp proximal
SNP A/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T A T T T T
rs252376230
MGI SNP Detail
Alliance Variant
Chr3:30396451 Mecom Intron
Mecom Noncoding-Transcript-Variant
Rr574752 1913 bp proximal
SNP A/T A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A T A A A A
rs220947860
MGI SNP Detail
Alliance Variant
Chr3:30396472 Mecom Intron
Mecom Noncoding-Transcript-Variant
Rr574752 1892 bp proximal
SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C C C C C C
rs29811273
MGI SNP Detail
Alliance Variant
Chr3:30396475 Mecom Intron
Mecom Noncoding-Transcript-Variant
Rr574752 1889 bp proximal
SNP A/G A A G G A A G G G A G A A G G
rs260337351
MGI SNP Detail
Alliance Variant
Chr3:30396534 Mecom Intron
Mecom Noncoding-Transcript-Variant
Rr574752 1830 bp proximal
SNP G/T G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G T G G G G
rs227310075
MGI SNP Detail
Alliance Variant
Chr3:30396536 Mecom Intron
Mecom Noncoding-Transcript-Variant
Rr574752 1828 bp proximal
SNP C/G C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C G C C C C
rs239384555
MGI SNP Detail
Alliance Variant
Chr3:30396539 Mecom Intron
Mecom Noncoding-Transcript-Variant
Rr574752 1825 bp proximal
SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs29811272
MGI SNP Detail
Alliance Variant
Chr3:30396549 Mecom Intron
Mecom Noncoding-Transcript-Variant
Rr574752 1815 bp proximal
SNP C/T C C C C C C C C C C T C C T C
rs29811271
MGI SNP Detail
Alliance Variant
Chr3:30396579 Mecom Intron
Mecom Noncoding-Transcript-Variant
Rr574752 1785 bp proximal
SNP A/G A A A A A A G G A A A A A A
rs237443927
MGI SNP Detail
Alliance Variant
Chr3:30396581 Mecom Intron
Mecom Noncoding-Transcript-Variant
Rr574752 1783 bp proximal
SNP C/T C C C T C T T C C C C C C C C C C C C C C T T T T C C C C C C C T C C C C C C C T T C T C T C
rs29811270
MGI SNP Detail
Alliance Variant
Chr3:30396594 Mecom Intron
Mecom Noncoding-Transcript-Variant
Rr574752 1770 bp proximal
SNP A/G A A A A A A A A A A A A A G A
rs227611571
MGI SNP Detail
Alliance Variant
Chr3:30396709 Mecom Intron
Mecom Noncoding-Transcript-Variant
Rr574752 1655 bp proximal
SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs29811269
MGI SNP Detail
Alliance Variant
Chr3:30396710 Mecom Intron
Mecom Noncoding-Transcript-Variant
Rr574752 1654 bp proximal
SNP A/G A A G G A A A G G A A A A G G
rs29811268
MGI SNP Detail
Alliance Variant
Chr3:30396725 Mecom Intron
Mecom Noncoding-Transcript-Variant
Rr574752 1639 bp proximal
SNP A/G A A G G A A A G G A A A A G
rs29811267
MGI SNP Detail
Alliance Variant
Chr3:30396775 Mecom Intron
Mecom Noncoding-Transcript-Variant
Rr574752 1589 bp proximal
SNP A/T T T T T T T A A T T T A A
rs228964512
MGI SNP Detail
Alliance Variant
Chr3:30396787 Mecom Intron
Mecom Noncoding-Transcript-Variant
Rr574752 1577 bp proximal
SNP A/G G G G G A G A A G G G G G G G G G G G G G G A A A G G G G G G A G G G G G G A A A A G A G
rs246232763
MGI SNP Detail
Alliance Variant
Chr3:30396798 Mecom Intron
Mecom Noncoding-Transcript-Variant
Rr574752 1566 bp proximal
SNP C/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G C G G G G
rs215710814
MGI SNP Detail
Alliance Variant
Chr3:30396803 Mecom Intron
Mecom Noncoding-Transcript-Variant
Rr574752 1561 bp proximal
SNP A/T A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A T A A A A
rs232083540
MGI SNP Detail
Alliance Variant
Chr3:30396826 Mecom Intron
Mecom Noncoding-Transcript-Variant
Rr574752 1538 bp proximal
SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs29811266
MGI SNP Detail
Alliance Variant
Chr3:30396843 Mecom Intron
Mecom Noncoding-Transcript-Variant
Rr574752 1521 bp proximal
SNP C/G G G C C G G G C C G G G G G C
rs29811265
MGI SNP Detail
Alliance Variant
Chr3:30396881 Mecom Intron
Mecom Noncoding-Transcript-Variant
Rr574752 1483 bp proximal
SNP C/T T T C C T T T C C T T T T C
rs235780279
MGI SNP Detail
Alliance Variant
Chr3:30396947 Mecom Intron
Mecom Noncoding-Transcript-Variant
Rr574752 1417 bp proximal
SNP A/C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C A C C C C
rs263994066
MGI SNP Detail
Alliance Variant
Chr3:30396963 Mecom Intron
Mecom Noncoding-Transcript-Variant
Rr574752 1401 bp proximal
SNP G/T G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G T G G G G
SNP ID
(GRCm39)
Map Position
(GRCm39)
Gene & Category Variation
Type
Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
129X1/SvJ
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
MSM/Ms
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PL/J
PWD/PhJ
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs222753463
MGI SNP Detail
Alliance Variant
Chr3:30396979 Mecom Intron
Mecom Noncoding-Transcript-Variant
Rr574752 1385 bp proximal
SNP A/G A A A A G A G G A G A A A A A A A A A A A A A G G G G A A A A A A A A G A A A A A A A G G A G A G G A G A
rs29811264
MGI SNP Detail
Alliance Variant
Chr3:30397017 Mecom Intron
Mecom Noncoding-Transcript-Variant
Rr574752 1347 bp proximal
SNP A/T A A T T A A A T T A T A A T T
rs51621882
MGI SNP Detail
Alliance Variant
Chr3:30397045 Mecom Intron
Mecom Noncoding-Transcript-Variant
Rr574752 1319 bp proximal
SNP A/C C A
rs581565863
MGI SNP Detail
Alliance Variant
Chr3:30397075 Mecom Intron
Mecom Noncoding-Transcript-Variant
Rr574752 1289 bp proximal
SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs252076775
MGI SNP Detail
Alliance Variant
Chr3:30397079 Mecom Intron
Mecom Noncoding-Transcript-Variant
Rr574752 1285 bp proximal
SNP G/T G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G T G G G G G G G G G G G G
rs219521389
MGI SNP Detail
Alliance Variant
Chr3:30397098 Mecom Intron
Mecom Noncoding-Transcript-Variant
Rr574752 1266 bp proximal
SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs237357447
MGI SNP Detail
Alliance Variant
Chr3:30397178 Mecom Intron
Mecom Noncoding-Transcript-Variant
Rr574752 1186 bp proximal
SNP G/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T G T T T T
rs262710117
MGI SNP Detail
Alliance Variant
Chr3:30397179 Mecom Intron
Mecom Noncoding-Transcript-Variant
Rr574752 1185 bp proximal
SNP A/C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C A C C C C
rs29810413
MGI SNP Detail
Alliance Variant
Chr3:30397224 Mecom Intron
Mecom Noncoding-Transcript-Variant
Rr574752 1140 bp proximal
SNP A/C A A C C A A A C C A A A A C C
rs242139383
MGI SNP Detail
Alliance Variant
Chr3:30397271 Mecom Intron
Mecom Noncoding-Transcript-Variant
Rr574752 1093 bp proximal
SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A A A A A A A A A
rs29810412
MGI SNP Detail
Alliance Variant
Chr3:30397275 Mecom Intron
Mecom Noncoding-Transcript-Variant
Rr574752 1089 bp proximal
SNP A/G G G A A G G G A A G G G G A A
rs29810411
MGI SNP Detail
Alliance Variant
Chr3:30397305 Mecom Intron
Mecom Noncoding-Transcript-Variant
Rr574752 1059 bp proximal
SNP G/T G G G G G G G G G G G G G T G
rs29810410
MGI SNP Detail
Alliance Variant
Chr3:30397411 Mecom Intron
Mecom Noncoding-Transcript-Variant
Rr574752 953 bp proximal
SNP A/G A A G G A A A G G A A A A A G
rs259641227
MGI SNP Detail
Alliance Variant
Chr3:30397416 Mecom Intron
Mecom Noncoding-Transcript-Variant
Rr574752 948 bp proximal
SNP C/T C C C C T C T T C T C C C C C C C C C C C C C T T T T C C C C C C C C T C C C C C C C T T C T C T T C T C
rs225548195
MGI SNP Detail
Alliance Variant
Chr3:30397484 Mecom Intron
Mecom Noncoding-Transcript-Variant
Rr574752 880 bp proximal
SNP C/T C C C C T C T T C T C C C C C C C C C C C C C T T T T C C C C C C C C T C C C C C C C T T C T C T T C T C
rs256058004
MGI SNP Detail
Alliance Variant
Chr3:30397511 Mecom Intron
Mecom Noncoding-Transcript-Variant
Rr574752 853 bp proximal
SNP C/G C C C C G C G G C G C C C C C C C C C G C C G G G G G G C C C C C G C G C C C C C C G G C G C G G C G C
rs212268238
MGI SNP Detail
Alliance Variant
Chr3:30397519 Mecom Intron
Mecom Noncoding-Transcript-Variant
Rr574752 845 bp proximal
SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs229610564
MGI SNP Detail
Alliance Variant
Chr3:30397543 Mecom Intron
Mecom Noncoding-Transcript-Variant
Rr574752 821 bp proximal
SNP G/T G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G T G G G G G G G G G G G G
rs239806331
MGI SNP Detail
Alliance Variant
Chr3:30397548 Mecom Intron
Mecom Noncoding-Transcript-Variant
Rr574752 816 bp proximal
SNP C C C
rs217607440
MGI SNP Detail
Alliance Variant
Chr3:30397579 Mecom Intron
Mecom Noncoding-Transcript-Variant
Rr574752 785 bp proximal
SNP A/G G G G G G G G G G G G G G G G G G G G G G G A G G G G A G G G G G A G G G G G G G G G G G G G G A G G G G
rs232875228
MGI SNP Detail
Alliance Variant
Chr3:30397587 Mecom Intron
Mecom Noncoding-Transcript-Variant
Rr574752 777 bp proximal
SNP G/T T T T T G T G G T G T T T T T T T T T G T T G G G G G G T T T T T G T G T T T T G T T G G T G T G G T G T
rs252016732
MGI SNP Detail
Alliance Variant
Chr3:30397675 Mecom Intron
Mecom Noncoding-Transcript-Variant
Rr574752 689 bp proximal
SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs213759571
MGI SNP Detail
Alliance Variant
Chr3:30397696 Mecom Intron
Mecom Noncoding-Transcript-Variant
Rr574752 668 bp proximal
SNP A/G A A A A G A G G A G A A A A A A A A A G A A G G G G G G A A A A A G A G A A A A G A A G G A G A G G A G A
rs52164190
MGI SNP Detail
Alliance Variant
Chr3:30397754 Mecom Intron
Mecom Noncoding-Transcript-Variant
Rr574752 610 bp proximal
SNP C C
rs387840631
MGI SNP Detail
Alliance Variant
Chr3:30397828 Mecom Intron
Mecom Noncoding-Transcript-Variant
Rr574752 536 bp proximal
SNP A/C A A A A C A C A C A A A A A A A A A C A A C C C A A A A A C A A A A A C A A C A A C C A C A
SNP ID
(GRCm39)
Map Position
(GRCm39)
Gene & Category Variation
Type
Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
129X1/SvJ
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
MSM/Ms
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PL/J
PWD/PhJ
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs237168947
MGI SNP Detail
Alliance Variant
Chr3:30397862 Mecom Intron
Mecom Noncoding-Transcript-Variant
Rr574752 502 bp proximal
SNP A/G G G G G A G A A G A G G G G G G G G G G G G A A A A A A G G G G G A G A G G G G G G G A A G A G A A G A G
rs261058972
MGI SNP Detail
Alliance Variant
Chr3:30397866 Mecom Intron
Mecom Noncoding-Transcript-Variant
Rr574752 498 bp proximal
SNP A/G G G G G A G A A G A G G G G G G G G G G G G G A A A A G G G G G G G G A G G G G G G G A A G A G G A G A G
rs29810409
MGI SNP Detail
Alliance Variant
Chr3:30397915 Mecom Intron
Mecom Noncoding-Transcript-Variant
Rr574752 449 bp proximal
SNP C/T C C C C C C T C C C C C C C C
rs244907019
MGI SNP Detail
Alliance Variant
Chr3:30397924 Mecom Intron
Mecom Noncoding-Transcript-Variant
Rr574752 440 bp proximal
SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs29810408
MGI SNP Detail
Alliance Variant
Chr3:30397946 Mecom Intron
Mecom Noncoding-Transcript-Variant
Rr574752 418 bp proximal
SNP A/C A A A A A A C A A A A A A C A
rs29810407
MGI SNP Detail
Alliance Variant
Chr3:30397977 Mecom Intron
Mecom Noncoding-Transcript-Variant
Rr574752 387 bp proximal
SNP C/T C C T T C C C T T C C C C C T
rs240158078
MGI SNP Detail
Alliance Variant
Chr3:30398008 Mecom Intron
Mecom Noncoding-Transcript-Variant
Rr574752 356 bp proximal
SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs29810406
MGI SNP Detail
Alliance Variant
Chr3:30398067 Mecom Intron
Mecom Noncoding-Transcript-Variant
Rr574752 297 bp proximal
SNP C/T C C C C C C T C C C C C C C C
rs225484358
MGI SNP Detail
Alliance Variant
Chr3:30398075 Mecom Intron
Mecom Noncoding-Transcript-Variant
Rr574752 289 bp proximal
SNP A/G G G G G G G G G G G G G G G G G G G G A G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G
rs30048464
MGI SNP Detail
Alliance Variant
Chr3:30398102 Mecom Intron
Mecom Noncoding-Transcript-Variant
Rr574752 262 bp proximal
SNP A/G A A A G
rs264554665
MGI SNP Detail
Alliance Variant
Chr3:30398125 Mecom Intron
Mecom Noncoding-Transcript-Variant
Rr574752 239 bp proximal
SNP A/C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C A C C C C
rs229111515
MGI SNP Detail
Alliance Variant
Chr3:30398128 Mecom Intron
Mecom Noncoding-Transcript-Variant
Rr574752 236 bp proximal
SNP A/C A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A C A A A A A A A A A A A A
rs259507788
MGI SNP Detail
Alliance Variant
Chr3:30398145 Mecom Intron
Mecom Noncoding-Transcript-Variant
Rr574752 219 bp proximal
SNP A/G G G G G G G G G G G G G G G G G G G G A G G G G G G G G G G G G G G G G G G G G A G G G G G G G G G G G G
rs29810405
MGI SNP Detail
Alliance Variant
Chr3:30398164 Mecom Intron
Mecom Noncoding-Transcript-Variant
Rr574752 200 bp proximal
SNP C/T C C T T C C C T T T C C C C T
rs227164420
MGI SNP Detail
Alliance Variant
Chr3:30398172 Mecom Intron
Mecom Noncoding-Transcript-Variant
Rr574752 192 bp proximal
SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T T T T T T T T T
rs29810404
MGI SNP Detail
Alliance Variant
Chr3:30398195 Mecom Intron
Mecom Noncoding-Transcript-Variant
Rr574752 169 bp proximal
SNP G/T G G G G G G T G G G G G G T G
rs30120082
MGI SNP Detail
Alliance Variant
Chr3:30398245 Mecom Intron
Mecom Noncoding-Transcript-Variant
Rr574752 119 bp proximal
SNP G/T G G T
rs29809443
MGI SNP Detail
Alliance Variant
Chr3:30398361 Mecom Intron
Mecom Noncoding-Transcript-Variant
Rr574752 3 bp proximal
SNP G/T T T T T T T T T T T T T T G T
rs29809442
MGI SNP Detail
Alliance Variant
Chr3:30398363 Mecom Intron
Mecom Noncoding-Transcript-Variant
Rr574752 1 bp proximal
SNP G/T G G G G G G T G G G G G G G G
rs29809441
MGI SNP Detail
Alliance Variant
Chr3:30398510 Mecom Intron
Mecom Noncoding-Transcript-Variant
Rr574752 within coordinates of
SNP A/C C C A A C C C C A C C C C C C
rs29809440
MGI SNP Detail
Alliance Variant
Chr3:30398519 Mecom Intron
Mecom Noncoding-Transcript-Variant
Rr574752 within coordinates of
SNP A/G G G G G G G A G G G G G G G G
rs254272277
MGI SNP Detail
Alliance Variant
Chr3:30398604 Mecom Intron
Mecom Noncoding-Transcript-Variant
Rr574752 within coordinates of
SNP A/C A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A C A A A A
rs29809439
MGI SNP Detail
Alliance Variant
Chr3:30398639 Mecom Intron
Mecom Noncoding-Transcript-Variant
Rr574752 within coordinates of
SNP A/G G G G G G G G G G G A G G G G
rs223397323
MGI SNP Detail
Alliance Variant
Chr3:30398642 Mecom Intron
Mecom Noncoding-Transcript-Variant
Rr574752 within coordinates of
SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs29809438
MGI SNP Detail
Alliance Variant
Chr3:30398728 Mecom Intron
Mecom Noncoding-Transcript-Variant
Rr574752 86 bp distal
SNP C/T T T T T T T C T T T T T T C T
SNP ID
(GRCm39)
Map Position
(GRCm39)
Gene & Category Variation
Type
Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
129X1/SvJ
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
MSM/Ms
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PL/J
PWD/PhJ
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs253614024
MGI SNP Detail
Alliance Variant
Chr3:30398734 Mecom Intron
Mecom Noncoding-Transcript-Variant
Rr574752 92 bp distal
SNP C/T T T T T T T T T T T T T T T T T T T C T T T T T T T T T T T T T T T T T T T T C T T T T T T C T T T T
rs581175204
MGI SNP Detail
Alliance Variant
Chr3:30398794 Mecom Intron
Mecom Noncoding-Transcript-Variant
Rr574752 152 bp distal
SNP A/T T T T T T T T T T T T T T T T T T A T T T T T
rs584533239
MGI SNP Detail
Alliance Variant
Chr3:30398804 Mecom Intron
Mecom Noncoding-Transcript-Variant
Rr574752 162 bp distal
SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs222231815
MGI SNP Detail
Alliance Variant
Chr3:30398836 Mecom Intron
Mecom Noncoding-Transcript-Variant
Rr574752 194 bp distal
SNP A/G A A A A A A A A A A A A A A A A A A G A A A A A A A A A A A A A A A A A A G A A A A A A A A A A A A
rs246519867
MGI SNP Detail
Alliance Variant
Chr3:30398887 Mecom Intron
Mecom Noncoding-Transcript-Variant
Rr574752 245 bp distal
SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A A A A A A A A A
rs29809437
MGI SNP Detail
Alliance Variant
Chr3:30398972 Mecom Intron
Mecom Noncoding-Transcript-Variant
Rr574752 330 bp distal
SNP G/T G G G G G G T G G G G G G G G
rs228974947
MGI SNP Detail
Alliance Variant
Chr3:30398974 Mecom Intron
Mecom Noncoding-Transcript-Variant
Rr574752 332 bp distal
SNP C/T T T T T T T T T T T T T T T T T T T T C T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T
rs578429997
MGI SNP Detail
Alliance Variant
Chr3:30398977 Mecom Intron
Mecom Noncoding-Transcript-Variant
Rr574752 335 bp distal
SNP A/C A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A C A A A A
rs581649696
MGI SNP Detail
Alliance Variant
Chr3:30398978 Mecom Intron
Mecom Noncoding-Transcript-Variant
Rr574752 336 bp distal
SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs29809436
MGI SNP Detail
Alliance Variant
Chr3:30399030 Mecom Intron
Mecom Noncoding-Transcript-Variant
Rr574752 388 bp distal
SNP A/G G G G G G G G G G G G G G A G
rs29809435
MGI SNP Detail
Alliance Variant
Chr3:30399036 Mecom Intron
Mecom Noncoding-Transcript-Variant
Rr574752 394 bp distal
SNP C/T T T T T T T T T T T C T T T
rs227108611
MGI SNP Detail
Alliance Variant
Chr3:30399044 Mecom Intron
Mecom Noncoding-Transcript-Variant
Rr574752 402 bp distal
SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs29809434
MGI SNP Detail
Alliance Variant
Chr3:30399122 Mecom Intron
Mecom Noncoding-Transcript-Variant
Rr574752 480 bp distal
SNP A/G A A A A A A A A A A G A A G A
rs255832676
MGI SNP Detail
Alliance Variant
Chr3:30399169 Mecom Intron
Mecom Noncoding-Transcript-Variant
Rr574752 527 bp distal
SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs230942756
MGI SNP Detail
Alliance Variant
Chr3:30399205 Mecom Intron
Mecom Noncoding-Transcript-Variant
Rr574752 563 bp distal
SNP C/T C C C C C C C C C C C C C C C C C C C T C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs29808693
MGI SNP Detail
Alliance Variant
Chr3:30399210 Mecom Intron
Mecom Noncoding-Transcript-Variant
Rr574752 568 bp distal
SNP C/G C C C C C C C C C G C C G C
rs212966480
MGI SNP Detail
Alliance Variant
Chr3:30399219 Mecom Intron
Mecom Noncoding-Transcript-Variant
Rr574752 577 bp distal
SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs242301510
MGI SNP Detail
Alliance Variant
Chr3:30399250 Mecom Intron
Mecom Noncoding-Transcript-Variant
Rr574752 608 bp distal
SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs249017510
MGI SNP Detail
Alliance Variant
Chr3:30399259 Mecom Intron
Mecom Noncoding-Transcript-Variant
Rr574752 617 bp distal
SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs217275762
MGI SNP Detail
Alliance Variant
Chr3:30399297 Mecom Intron
Mecom Noncoding-Transcript-Variant
Rr574752 655 bp distal
SNP A/G A A A A A A A A A A A A A A A A A A A G A A G A A A A G A A A A A G A A A A A A A A A A A A A A A A A A A
rs233781517
MGI SNP Detail
Alliance Variant
Chr3:30399305 Mecom Intron
Mecom Noncoding-Transcript-Variant
Rr574752 663 bp distal
SNP C/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G C G G G G
rs253556378
MGI SNP Detail
Alliance Variant
Chr3:30399331 Mecom Intron
Mecom Noncoding-Transcript-Variant
Rr574752 689 bp distal
SNP C/T T T T T T T T T T T T T T T T T T T T C T T C T T T T C T T T T T C T T T T T T C T T T T T T T T T T T T
rs222086846
MGI SNP Detail
Alliance Variant
Chr3:30399379 Mecom Intron
Mecom Noncoding-Transcript-Variant
Rr574752 737 bp distal
SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs236619783
MGI SNP Detail
Alliance Variant
Chr3:30399423 Mecom Intron
Mecom Noncoding-Transcript-Variant
Rr574752 781 bp distal
SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs260615169
MGI SNP Detail
Alliance Variant
Chr3:30399424 Mecom Intron
Mecom Noncoding-Transcript-Variant
Rr574752 782 bp distal
SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
<< first < prev12 next > last >>
Showing SNP(s) 1 - 100 of 143

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
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last database update
03/18/2025
MGI 6.24
The Jackson Laboratory

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