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Mouse SNP Summary
Symbol
Name
ID
Rr574769
regulatory region 574769
MGI:8036901

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SNP ID
(GRCm39)
Map Position
(GRCm39)
Gene & Category Variation
Type
Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PL/J
PWD/PhJ
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs242429099
MGI SNP Detail
Alliance Variant
Chr3:30513089 Mecom Intron
Mecom Noncoding-Transcript-Variant
Rr574769 1976 bp proximal
SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs264826257
MGI SNP Detail
Alliance Variant
Chr3:30513092 Mecom Intron
Mecom Noncoding-Transcript-Variant
Rr574769 1973 bp proximal
SNP A/G G G G G G G G G G G G G G G G G G G G A G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs225679098
MGI SNP Detail
Alliance Variant
Chr3:30513107 Mecom Intron
Mecom Noncoding-Transcript-Variant
Rr574769 1958 bp proximal
SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs241492376
MGI SNP Detail
Alliance Variant
Chr3:30513145 Mecom Intron
Mecom Noncoding-Transcript-Variant
Rr574769 1920 bp proximal
SNP C/G C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C G C C C C
rs257212523
MGI SNP Detail
Alliance Variant
Chr3:30513155 Mecom Intron
Mecom Noncoding-Transcript-Variant
Rr574769 1910 bp proximal
SNP A/G G G G G G G G G G G G G G G G G G G G A G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G
rs29805166
MGI SNP Detail
Alliance Variant
Chr3:30513215 Mecom Intron
Mecom Noncoding-Transcript-Variant
Rr574769 1850 bp proximal
SNP C/T T T T T T T C T T T T T T T T
rs29805165
MGI SNP Detail
Alliance Variant
Chr3:30513287 Mecom Intron
Mecom Noncoding-Transcript-Variant
Rr574769 1778 bp proximal
SNP A/T A A A A A A A A A T A A A
rs262633248
MGI SNP Detail
Alliance Variant
Chr3:30513363 Mecom Intron
Mecom Noncoding-Transcript-Variant
Rr574769 1702 bp proximal
SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs227848240
MGI SNP Detail
Alliance Variant
Chr3:30513408 Mecom Intron
Mecom Noncoding-Transcript-Variant
Rr574769 1657 bp proximal
SNP A/C C C C C C C C C C C C C C C C C C C C A C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C
rs29805164
MGI SNP Detail
Alliance Variant
Chr3:30513430 Mecom Intron
Mecom Noncoding-Transcript-Variant
Rr574769 1635 bp proximal
SNP A/G G G G G G G G G G A G G G
rs580520095
MGI SNP Detail
Alliance Variant
Chr3:30513470 Mecom Intron
Mecom Noncoding-Transcript-Variant
Rr574769 1595 bp proximal
SNP C/T C C C C C C C C C C C C C C C C C C C T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C
rs218391523
MGI SNP Detail
Alliance Variant
Chr3:30513516 Mecom Intron
Mecom Noncoding-Transcript-Variant
Rr574769 1549 bp proximal
SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs236682506
MGI SNP Detail
Alliance Variant
Chr3:30513552 Mecom Intron
Mecom Noncoding-Transcript-Variant
Rr574769 1513 bp proximal
SNP A/C/T C C C C C C C C C C C C C C C C C C C C C A C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs246829037
MGI SNP Detail
Alliance Variant
Chr3:30513611 Mecom Intron
Mecom Noncoding-Transcript-Variant
Rr574769 1454 bp proximal
SNP A/C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C A C C C C
rs29803983
MGI SNP Detail
Alliance Variant
Chr3:30513648 Mecom Intron
Mecom Noncoding-Transcript-Variant
Rr574769 1417 bp proximal
SNP C/T C C T C C C C C C C C C C C
rs29803982
MGI SNP Detail
Alliance Variant
Chr3:30513671 Mecom Intron
Mecom Noncoding-Transcript-Variant
Rr574769 1394 bp proximal
SNP C/T T T T T T T T T T C T T T
rs262481326
MGI SNP Detail
Alliance Variant
Chr3:30513786 Mecom Intron
Mecom Noncoding-Transcript-Variant
Rr574769 1279 bp proximal
SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs212142041
MGI SNP Detail
Alliance Variant
Chr3:30513807 Mecom Intron
Mecom Noncoding-Transcript-Variant
Rr574769 1258 bp proximal
SNP C/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G C G G G G
rs237404221
MGI SNP Detail
Alliance Variant
Chr3:30513816 Mecom Intron
Mecom Noncoding-Transcript-Variant
Rr574769 1249 bp proximal
SNP C/G C C C C C C C C C C C C C C C C C C C C C C G C C C C G C C C C C G C C C C C C G C C C C C C C G C C C C
rs260411253
MGI SNP Detail
Alliance Variant
Chr3:30513843 Mecom Intron
Mecom Noncoding-Transcript-Variant
Rr574769 1222 bp proximal
SNP C/T T T T T T T T T T T T T T T T T T T T T T T C T T T T C T T T T T C T T T T T T C T T T T T T T C T T T T
rs221855208
MGI SNP Detail
Alliance Variant
Chr3:30513846 Mecom Intron
Mecom Noncoding-Transcript-Variant
Rr574769 1219 bp proximal
SNP C/T T T T T T T T T T T T T T T T T T T T T T T C T T T T C T T T T T C T T T T T T C T T T T T T T C T T T T
rs241465186
MGI SNP Detail
Alliance Variant
Chr3:30513866 Mecom Intron
Mecom Noncoding-Transcript-Variant
Rr574769 1199 bp proximal
SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs251144250
MGI SNP Detail
Alliance Variant
Chr3:30513884 Mecom Intron
Mecom Noncoding-Transcript-Variant
Rr574769 1181 bp proximal
SNP A/G A A A A A A A A A A A A A A A A A A A A A A G A A A A G A A A A A G A A A A A A G A A A A A A A G A A A A
rs29803981
MGI SNP Detail
Alliance Variant
Chr3:30513889 Mecom Intron
Mecom Noncoding-Transcript-Variant
Rr574769 1176 bp proximal
SNP A/G A A A A A A A A A A G A A A
rs237599651
MGI SNP Detail
Alliance Variant
Chr3:30513900 Mecom Intron
Mecom Noncoding-Transcript-Variant
Rr574769 1165 bp proximal
SNP A/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T A T T T T
SNP ID
(GRCm39)
Map Position
(GRCm39)
Gene & Category Variation
Type
Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PL/J
PWD/PhJ
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs265197500
MGI SNP Detail
Alliance Variant
Chr3:30513927 Mecom Intron
Mecom Noncoding-Transcript-Variant
Rr574769 1138 bp proximal
SNP A/C A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A C A A A A
rs227285705
MGI SNP Detail
Alliance Variant
Chr3:30513953 Mecom Intron
Mecom Noncoding-Transcript-Variant
Rr574769 1112 bp proximal
SNP A/G A A A A A A A A A A A A A A A A A A A G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A
rs244712980
MGI SNP Detail
Alliance Variant
Chr3:30513971 Mecom Intron
Mecom Noncoding-Transcript-Variant
Rr574769 1094 bp proximal
SNP A/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T A T T T T
rs263914653
MGI SNP Detail
Alliance Variant
Chr3:30513984 Mecom Intron
Mecom Noncoding-Transcript-Variant
Rr574769 1081 bp proximal
SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs29803980
MGI SNP Detail
Alliance Variant
Chr3:30514004 Mecom Intron
Mecom Noncoding-Transcript-Variant
Rr574769 1061 bp proximal
SNP C/G G G G C G G G G C G G G G G C
rs583816778
MGI SNP Detail
Alliance Variant
Chr3:30514061 Mecom Intron
Mecom Noncoding-Transcript-Variant
Rr574769 1004 bp proximal
SNP G/T G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G T G G G G
rs246749432
MGI SNP Detail
Alliance Variant
Chr3:30514106 Mecom Intron
Mecom Noncoding-Transcript-Variant
Rr574769 959 bp proximal
SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C C C C C C C C C
rs216218246
MGI SNP Detail
Alliance Variant
Chr3:30514113 Mecom Intron
Mecom Noncoding-Transcript-Variant
Rr574769 952 bp proximal
SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs226138793
MGI SNP Detail
Alliance Variant
Chr3:30514116 Mecom Intron
Mecom Noncoding-Transcript-Variant
Rr574769 949 bp proximal
SNP G/T G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G T G G G G
rs29803979
MGI SNP Detail
Alliance Variant
Chr3:30514179 Mecom Intron
Mecom Noncoding-Transcript-Variant
Rr574769 886 bp proximal
SNP A/G A A A G A A G A G A A G
rs212278228
MGI SNP Detail
Alliance Variant
Chr3:30514183 Mecom Intron
Mecom Noncoding-Transcript-Variant
Rr574769 882 bp proximal
SNP A/G A A A A A A A A A A A A A A A A A A A G A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs235518552
MGI SNP Detail
Alliance Variant
Chr3:30514378 Mecom Intron
Mecom Noncoding-Transcript-Variant
Rr574769 687 bp proximal
SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs263835562
MGI SNP Detail
Alliance Variant
Chr3:30514438 Mecom Intron
Mecom Noncoding-Transcript-Variant
Rr574769 627 bp proximal
SNP T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T
rs217425066
MGI SNP Detail
Alliance Variant
Chr3:30514452 Mecom Intron
Mecom Noncoding-Transcript-Variant
Rr574769 613 bp proximal
SNP A/G G G G G G G G G G G G G G G G G G G A G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G
rs233041816
MGI SNP Detail
Alliance Variant
Chr3:30514478 Mecom Intron
Mecom Noncoding-Transcript-Variant
Rr574769 587 bp proximal
SNP C/T C C C C C C C C C C C C C C C C C C C C C T C C C C T C C C C C T C C C C C C T C C C C C C C C C C C C
rs587171389
MGI SNP Detail
Alliance Variant
Chr3:30514486 Mecom Intron
Mecom Noncoding-Transcript-Variant
Rr574769 579 bp proximal
SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs581154665
MGI SNP Detail
Alliance Variant
Chr3:30514487 Mecom Intron
Mecom Noncoding-Transcript-Variant
Rr574769 578 bp proximal
SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs583352937
MGI SNP Detail
Alliance Variant
Chr3:30514531 Mecom Intron
Mecom Noncoding-Transcript-Variant
Rr574769 534 bp proximal
SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs586643561
MGI SNP Detail
Alliance Variant
Chr3:30514556 Mecom Intron
Mecom Noncoding-Transcript-Variant
Rr574769 509 bp proximal
SNP T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T
rs580537230
MGI SNP Detail
Alliance Variant
Chr3:30514586 Mecom Intron
Mecom Noncoding-Transcript-Variant
Rr574769 479 bp proximal
SNP A/G G G G G G G G G G G G G A G G G G G G G G G G G G G G G G G G G G G G G G G G
rs584210494
MGI SNP Detail
Alliance Variant
Chr3:30514592 Mecom Intron
Mecom Noncoding-Transcript-Variant
Rr574769 473 bp proximal
SNP G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G
rs579340152
MGI SNP Detail
Alliance Variant
Chr3:30514671 Mecom Intron
Mecom Noncoding-Transcript-Variant
Rr574769 394 bp proximal
SNP A/G G G G G G G G G G G G G G G G G G G A G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G
rs251109580
MGI SNP Detail
Alliance Variant
Chr3:30514678 Mecom Intron
Mecom Noncoding-Transcript-Variant
Rr574769 387 bp proximal
SNP C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C
rs245880393
MGI SNP Detail
Alliance Variant
Chr3:30514694 Mecom Intron
Mecom Noncoding-Transcript-Variant
Rr574769 371 bp proximal
SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A A A A A A A A A
rs257850440
MGI SNP Detail
Alliance Variant
Chr3:30514717 Mecom Intron
Mecom Noncoding-Transcript-Variant
Rr574769 348 bp proximal
SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
SNP ID
(GRCm39)
Map Position
(GRCm39)
Gene & Category Variation
Type
Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PL/J
PWD/PhJ
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs219659420
MGI SNP Detail
Alliance Variant
Chr3:30514755 Mecom Intron
Mecom Noncoding-Transcript-Variant
Rr574769 310 bp proximal
SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs241831401
MGI SNP Detail
Alliance Variant
Chr3:30514779 Mecom Intron
Mecom Noncoding-Transcript-Variant
Rr574769 286 bp proximal
SNP A/G G G G G G G G G G G G G G G G G G G G A G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs265844924
MGI SNP Detail
Alliance Variant
Chr3:30514816 Mecom Intron
Mecom Noncoding-Transcript-Variant
Rr574769 249 bp proximal
SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs229009740
MGI SNP Detail
Alliance Variant
Chr3:30514828 Mecom Intron
Mecom Noncoding-Transcript-Variant
Rr574769 237 bp proximal
SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs240337933
MGI SNP Detail
Alliance Variant
Chr3:30514881 Mecom Intron
Mecom Noncoding-Transcript-Variant
Rr574769 184 bp proximal
SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs260190012
MGI SNP Detail
Alliance Variant
Chr3:30514896 Mecom Intron
Mecom Noncoding-Transcript-Variant
Rr574769 169 bp proximal
SNP G/T G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G T G G G G
rs226055119
MGI SNP Detail
Alliance Variant
Chr3:30514941 Mecom Intron
Mecom Noncoding-Transcript-Variant
Rr574769 124 bp proximal
SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs256673156
MGI SNP Detail
Alliance Variant
Chr3:30515031 Mecom Intron
Mecom Noncoding-Transcript-Variant
Rr574769 34 bp proximal
SNP A/C A A A A A A A A A A A A A A A A A A A C A A C A A A A C A A A A A C A A A A A A C A A A A A A A C A A A A
rs212417832
MGI SNP Detail
Alliance Variant
Chr3:30515276 Mecom Intron
Mecom Noncoding-Transcript-Variant
Rr574769 within coordinates of
SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs229711177
MGI SNP Detail
Alliance Variant
Chr3:30515277 Mecom Intron
Mecom Noncoding-Transcript-Variant
Rr574769 within coordinates of
SNP G/T G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G T G G G G
rs253974039
MGI SNP Detail
Alliance Variant
Chr3:30515305 Mecom Intron
Mecom Noncoding-Transcript-Variant
Rr574769 within coordinates of
SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs581616827
MGI SNP Detail
Alliance Variant
Chr3:30515319 Mecom Intron
Mecom Noncoding-Transcript-Variant
Rr574769 within coordinates of
SNP T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T
rs585005654
MGI SNP Detail
Alliance Variant
Chr3:30515364 Mecom Intron
Mecom Noncoding-Transcript-Variant
Rr574769 within coordinates of
SNP A/G G G G G G G G G G G G G G G G G G G G A G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G
rs217401668
MGI SNP Detail
Alliance Variant
Chr3:30515384 Mecom Intron
Mecom Noncoding-Transcript-Variant
Rr574769 within coordinates of
SNP G/T G G G G G G G G G G G G G G G G G G G T G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G
rs29803978
MGI SNP Detail
Alliance Variant
Chr3:30515423 Mecom Intron
Mecom Noncoding-Transcript-Variant
Rr574769 within coordinates of
SNP G/T G G G G G G G G G T G G G
rs246145064
MGI SNP Detail
Alliance Variant
Chr3:30515494 Mecom Intron
Mecom Noncoding-Transcript-Variant
Rr574769 within coordinates of
SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs578927135
MGI SNP Detail
Alliance Variant
Chr3:30515562 Mecom Intron
Mecom Noncoding-Transcript-Variant
Rr574769 59 bp distal
SNP A/C C C C C C C A A C A C C C C C C C C C C C C C C C A C C C C C C C C C C C C C C C C C A C C C C C A A A
rs215768535
MGI SNP Detail
Alliance Variant
Chr3:30515683 Mecom Intron
Mecom Noncoding-Transcript-Variant
Rr574769 180 bp distal
SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs236110923
MGI SNP Detail
Alliance Variant
Chr3:30515723 Mecom Intron
Mecom Noncoding-Transcript-Variant
Rr574769 220 bp distal
SNP A/G A A A A A A A A A A A A A A A A A A A A A A G A A A A G A A A A A G A A A A A A G A A A A A A A G A A A A
rs262421835
MGI SNP Detail
Alliance Variant
Chr3:30515789 Mecom Intron
Mecom Noncoding-Transcript-Variant
Rr574769 286 bp distal
SNP A/T A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A T A A A A
rs220348948
MGI SNP Detail
Alliance Variant
Chr3:30515800 Mecom Intron
Mecom Noncoding-Transcript-Variant
Rr574769 297 bp distal
SNP G/T G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G T G G G G
rs237291277
MGI SNP Detail
Alliance Variant
Chr3:30515939 Mecom Intron
Mecom Noncoding-Transcript-Variant
Rr574769 436 bp distal
SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs254032051
MGI SNP Detail
Alliance Variant
Chr3:30516038 Mecom Intron
Mecom Noncoding-Transcript-Variant
Rr574769 535 bp distal
SNP A/G G G G G G G G G G G G G G G G G G G G A G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G
rs223212375
MGI SNP Detail
Alliance Variant
Chr3:30516094 Mecom Intron
Mecom Noncoding-Transcript-Variant
Rr574769 591 bp distal
SNP G/T G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G T G G G G
rs6409841
MGI SNP Detail
Alliance Variant
Chr3:30516131 Mecom Intron
Mecom Noncoding-Transcript-Variant
Rr574769 628 bp distal
SNP G/T T G
SNP ID
(GRCm39)
Map Position
(GRCm39)
Gene & Category Variation
Type
Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PL/J
PWD/PhJ
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs259694137
MGI SNP Detail
Alliance Variant
Chr3:30516145 Mecom Intron
Mecom Noncoding-Transcript-Variant
Rr574769 642 bp distal
SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs222425529
MGI SNP Detail
Alliance Variant
Chr3:30516157 Mecom Intron
Mecom Noncoding-Transcript-Variant
Rr574769 654 bp distal
SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C C T C C C C C C C C C C C C C C T C C C C
rs6410318
MGI SNP Detail
Alliance Variant
Chr3:30516194 Mecom Intron
Mecom Noncoding-Transcript-Variant
Rr574769 691 bp distal
SNP A/G G A
rs6410991
MGI SNP Detail
Alliance Variant
Chr3:30516341 Mecom Intron
Mecom Noncoding-Transcript-Variant
Rr574769 838 bp distal
SNP C/T C C C C C C C C T C C C T C C C
rs6411005
MGI SNP Detail
Alliance Variant
Chr3:30516351 Mecom Intron
Mecom Noncoding-Transcript-Variant
Rr574769 848 bp distal
SNP C/T C T
rs229288598
MGI SNP Detail
Alliance Variant
Chr3:30516372 Mecom Intron
Mecom Noncoding-Transcript-Variant
Rr574769 869 bp distal
SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs6411493
MGI SNP Detail
Alliance Variant
Chr3:30516404 Mecom Intron
Mecom Noncoding-Transcript-Variant
Rr574769 901 bp distal
SNP A/T A A A A A A T A A A T A A A
rs259898757
MGI SNP Detail
Alliance Variant
Chr3:30516448 Mecom Intron
Mecom Noncoding-Transcript-Variant
Rr574769 945 bp distal
SNP A/C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C A C C C C
rs226906338
MGI SNP Detail
Alliance Variant
Chr3:30516481 Mecom Intron
Mecom Noncoding-Transcript-Variant
Rr574769 978 bp distal
SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs29803977
MGI SNP Detail
Alliance Variant
Chr3:30516600 Mecom Intron
Mecom Noncoding-Transcript-Variant
Rr574769 1097 bp distal
SNP C/G C C C G C C C G C C C C G
rs29803976
MGI SNP Detail
Alliance Variant
Chr3:30516692 Mecom Intron
Mecom Noncoding-Transcript-Variant
Rr574769 1189 bp distal
SNP C/T C C C T C C C T C C C C T
rs239221264
MGI SNP Detail
Alliance Variant
Chr3:30516704 Mecom Intron
Mecom Noncoding-Transcript-Variant
Rr574769 1201 bp distal
SNP A/G G G G G G G A A G A G G G G G G G G G G G G G G G A G G G G G G G G G G G G G G G G G A G G G G G A A A
rs29803975
MGI SNP Detail
Alliance Variant
Chr3:30516710 Mecom Intron
Mecom Noncoding-Transcript-Variant
Rr574769 1207 bp distal
SNP A/G G G G G G G G G G A G G G
rs29803974
MGI SNP Detail
Alliance Variant
Chr3:30516773 Mecom Intron
Mecom Noncoding-Transcript-Variant
Rr574769 1270 bp distal
SNP C/G G G G G G C C G G G G G C G
rs29803013
MGI SNP Detail
Alliance Variant
Chr3:30516786 Mecom Intron
Mecom Noncoding-Transcript-Variant
Rr574769 1283 bp distal
SNP C/T C C C T C C C T C C C C T
rs254382439
MGI SNP Detail
Alliance Variant
Chr3:30516900 Mecom Intron
Mecom Noncoding-Transcript-Variant
Rr574769 1397 bp distal
Rr574771 within coordinates of
SNP G/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T G T T T T
rs223123277
MGI SNP Detail
Alliance Variant
Chr3:30516901 Mecom Intron
Mecom Noncoding-Transcript-Variant
Rr574769 1398 bp distal
Rr574771 within coordinates of
SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs233485816
MGI SNP Detail
Alliance Variant
Chr3:30516906 Mecom Intron
Mecom Noncoding-Transcript-Variant
Rr574769 1403 bp distal
Rr574771 within coordinates of
SNP A/G A A A A A A A A A A A A A A A A A A A G A A G A A A A G A A A A A G A A A A A A G A A A A A A A A A A A A
rs253335674
MGI SNP Detail
Alliance Variant
Chr3:30516923 Mecom Intron
Mecom Noncoding-Transcript-Variant
Rr574769 1420 bp distal
SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs222329587
MGI SNP Detail
Alliance Variant
Chr3:30516929 Mecom Intron
Mecom Noncoding-Transcript-Variant
Rr574769 1426 bp distal
SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs246655277
MGI SNP Detail
Alliance Variant
Chr3:30516933 Mecom Intron
Mecom Noncoding-Transcript-Variant
Rr574769 1430 bp distal
SNP A/G G G G G G G G G G G G G G G G G G G G A G G A G G G G A G G G G G A G G G G G G A G G G G G G G G G G G G
rs261677729
MGI SNP Detail
Alliance Variant
Chr3:30516949 Mecom Intron
Mecom Noncoding-Transcript-Variant
Rr574769 1446 bp distal
SNP C/T C C C C C C T T C T C C C C C C C C C C C C C C C T C C C T C C C C C C C C C C C C C C T C C C C C T T T
rs221425104
MGI SNP Detail
Alliance Variant
Chr3:30516993 Mecom Intron
Mecom Noncoding-Transcript-Variant
Rr574769 1490 bp distal
SNP C/G C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C G C C C C
rs241133794
MGI SNP Detail
Alliance Variant
Chr3:30517058 Mecom Intron
Mecom Noncoding-Transcript-Variant
Rr574769 1555 bp distal
SNP C/T C C C C C C C C C C C C C C C C C C C T C C T C C C C T C C C C C T C C C C C C T C C C C C C C C C C C C
rs260264420
MGI SNP Detail
Alliance Variant
Chr3:30517068 Mecom Intron
Mecom Noncoding-Transcript-Variant
Rr574769 1565 bp distal
SNP A/G A A A A A A A A A A A A A A A A A A A A A A G A A A A G A A A A A G A A A A A A G A A A A A A A A A A A A
<< first < prev12 next > last >>
Showing SNP(s) 1 - 100 of 118

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Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
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last database update
03/18/2025
MGI 6.24
The Jackson Laboratory