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Mouse SNP Summary
Symbol
Name
ID
Rr574781
regulatory region 574781
MGI:8036913

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Showing SNP(s) 1 - 55 of 55

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SNP ID
(GRCm39)
Map Position
(GRCm39)
Gene & Category Variation
Type
Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PL/J
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs259075743
MGI SNP Detail
Alliance Variant
Chr3:30560565 Mecom Intron
Mecom Noncoding-Transcript-Variant
Rr574781 1969 bp proximal
SNP G/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T G T T T T
rs221658234
MGI SNP Detail
Alliance Variant
Chr3:30560679 Mecom Intron
Mecom Noncoding-Transcript-Variant
Rr574781 1855 bp proximal
SNP C/T C C C C T C C C C C C C C C C C C C C C C C T C C C C T C C C C C T C C C C C C T C C T C C C C C C T C T
rs238074003
MGI SNP Detail
Alliance Variant
Chr3:30560759 Mecom Intron
Mecom Noncoding-Transcript-Variant
Rr574781 1775 bp proximal
SNP C/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G C G G G G
rs253665636
MGI SNP Detail
Alliance Variant
Chr3:30560765 Mecom Intron
Mecom Noncoding-Transcript-Variant
Rr574781 1769 bp proximal
SNP A/G A A A A G A A A A A A A A A A A A A A G A A A A A A A A A A A A A A A A A A A A A A A G A A A A G A G A G
rs224093383
MGI SNP Detail
Alliance Variant
Chr3:30560872 Mecom Intron
Mecom Noncoding-Transcript-Variant
Rr574781 1662 bp proximal
SNP A/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T A T T T T
rs241079904
MGI SNP Detail
Alliance Variant
Chr3:30560911 Mecom Intron
Mecom Noncoding-Transcript-Variant
Rr574781 1623 bp proximal
SNP A/G A A A A A A A A A A A A A A A A A A A G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A
rs266225918
MGI SNP Detail
Alliance Variant
Chr3:30561083 Mecom Intron
Mecom Noncoding-Transcript-Variant
Rr574781 1451 bp proximal
SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs231976863
MGI SNP Detail
Alliance Variant
Chr3:30561550 Cpgi13035 within coordinates of
Mecom Intron
Mecom Noncoding-Transcript-Variant
Rr574781 984 bp proximal
SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs258699821
MGI SNP Detail
Alliance Variant
Chr3:30561563 Cpgi13035 within coordinates of
Mecom Intron
Mecom Noncoding-Transcript-Variant
Rr574781 971 bp proximal
SNP A/G A A A A A A A A A A A A A A A A A A A G A A G A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs214281551
MGI SNP Detail
Alliance Variant
Chr3:30561565 Cpgi13035 within coordinates of
Mecom Intron
Mecom Noncoding-Transcript-Variant
Rr574781 969 bp proximal
SNP C/T C C C C T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C C C T C T
rs579382313
MGI SNP Detail
Alliance Variant
Chr3:30561638 Cpgi13035 within coordinates of
Mecom Intron
Mecom Noncoding-Transcript-Variant
Rr574781 896 bp proximal
SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs581610625
MGI SNP Detail
Alliance Variant
Chr3:30561677 Cpgi13035 within coordinates of
Mecom Intron
Mecom Noncoding-Transcript-Variant
Rr574781 857 bp proximal
SNP A/C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C A C C C C C C C C C C C C C A C C C C
rs231216555
MGI SNP Detail
Alliance Variant
Chr3:30561808 Cpgi13035 within coordinates of
Mecom Intron
Mecom Noncoding-Transcript-Variant
Rr574781 726 bp proximal
SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs243601034
MGI SNP Detail
Alliance Variant
Chr3:30561825 Cpgi13035 within coordinates of
Mecom Intron
Mecom Noncoding-Transcript-Variant
Rr574781 709 bp proximal
SNP A/G G G G G G G G G G G G G G G G G G G G A G G A G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G
rs213051648
MGI SNP Detail
Alliance Variant
Chr3:30561864 Cpgi13035 within coordinates of
Mecom Intron
Mecom Noncoding-Transcript-Variant
Rr574781 670 bp proximal
SNP C/T T T T T T T T T T T T T T T T T T T C T T C T T T T T T T T T T T T T T T T T T T T T T T T T T T T T
rs235740908
MGI SNP Detail
Alliance Variant
Chr3:30561889 Cpgi13035 within coordinates of
Mecom Intron
Mecom Noncoding-Transcript-Variant
Rr574781 645 bp proximal
SNP C/T T T T T T T T T T T T T T T T T T T T C T T C T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs254232334
MGI SNP Detail
Alliance Variant
Chr3:30561917 Cpgi13035 within coordinates of
Mecom Intron
Mecom Noncoding-Transcript-Variant
Rr574781 617 bp proximal
SNP A/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T A T T T T
rs218975983
MGI SNP Detail
Alliance Variant
Chr3:30562190 Cpgi13035 within coordinates of
Mecom Intron
Mecom Noncoding-Transcript-Variant
Rr574781 344 bp proximal
SNP A/C A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A C A A A A
rs237775396
MGI SNP Detail
Alliance Variant
Chr3:30562232 Cpgi13035 within coordinates of
Mecom Intron
Mecom Noncoding-Transcript-Variant
Rr574781 302 bp proximal
SNP A/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T A T T T T
rs263317991
MGI SNP Detail
Alliance Variant
Chr3:30562245 Cpgi13035 within coordinates of
Mecom Intron
Mecom Noncoding-Transcript-Variant
Rr574781 289 bp proximal
SNP A/C A A A A A A A A A A A A A A A A A A A C A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A
rs222558802
MGI SNP Detail
Alliance Variant
Chr3:30562278 Cpgi13035 within coordinates of
Mecom Intron
Mecom Noncoding-Transcript-Variant
Rr574781 256 bp proximal
SNP C/T T T T T T T T T T T T T T T T T T T T C T T C T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs238012520
MGI SNP Detail
Alliance Variant
Chr3:30562312 Cpgi13035 within coordinates of
Mecom Intron
Mecom Noncoding-Transcript-Variant
Rr574781 222 bp proximal
SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs247910313
MGI SNP Detail
Alliance Variant
Chr3:30562318 Cpgi13035 within coordinates of
Mecom Intron
Mecom Noncoding-Transcript-Variant
Rr574781 216 bp proximal
SNP A/G G G G G A G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G G G G G G
rs218454117
MGI SNP Detail
Alliance Variant
Chr3:30562386 Cpgi13035 within coordinates of
Mecom Intron
Mecom Noncoding-Transcript-Variant
Rr574781 148 bp proximal
SNP A/G A A A A A A A A A A A A A A A A A A A G A A G A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs240648207
MGI SNP Detail
Alliance Variant
Chr3:30562429 Cpgi13035 within coordinates of
Mecom Intron
Mecom Noncoding-Transcript-Variant
Rr574781 105 bp proximal
SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
SNP ID
(GRCm39)
Map Position
(GRCm39)
Gene & Category Variation
Type
Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PL/J
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs264325778
MGI SNP Detail
Alliance Variant
Chr3:30562468 Cpgi13035 within coordinates of
Mecom Intron
Mecom Noncoding-Transcript-Variant
Rr574781 66 bp proximal
SNP G/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T G T T T T
rs232416035
MGI SNP Detail
Alliance Variant
Chr3:30562473 Cpgi13035 within coordinates of
Mecom Intron
Mecom Noncoding-Transcript-Variant
Rr574781 61 bp proximal
SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs246743275
MGI SNP Detail
Alliance Variant
Chr3:30562500 Cpgi13035 within coordinates of
Mecom Intron
Mecom Noncoding-Transcript-Variant
Rr574781 34 bp proximal
SNP A/G A A A A G A G G A G A A A A A A A A A G A A G A A G A G A G A A A G A A A A A A G A A G G A A A G A G G
rs265159179
MGI SNP Detail
Alliance Variant
Chr3:30562598 Cpgi13035 within coordinates of
Mecom Intron
Mecom Noncoding-Transcript-Variant
Rr574781 43 bp distal
SNP A/G A A A A A A A A A A A A A A A A A A A G A A G A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs226991737
MGI SNP Detail
Alliance Variant
Chr3:30562604 Cpgi13035 within coordinates of
Mecom Intron
Mecom Noncoding-Transcript-Variant
Rr574781 49 bp distal
SNP A/G G G G G G G G G G G G G G G G G G G G A G G A G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G
rs243588801
MGI SNP Detail
Alliance Variant
Chr3:30562620 Cpgi13035 within coordinates of
Mecom Intron
Mecom Noncoding-Transcript-Variant
Rr574781 65 bp distal
SNP C/G C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C G C C C C
rs212983811
MGI SNP Detail
Alliance Variant
Chr3:30562629 Cpgi13035 within coordinates of
Mecom Intron
Mecom Noncoding-Transcript-Variant
Rr574781 74 bp distal
SNP A/C C C C C A C A A C A C C C C C C C C C C C C C C C A C C C C C C C C C C C C C C C C C A A C C C C C A A
rs228642374
MGI SNP Detail
Alliance Variant
Chr3:30562716 Cpgi13035 within coordinates of
Mecom Intron
Mecom Noncoding-Transcript-Variant
Rr574781 161 bp distal
SNP A/G A A A A A A A A A A A A A A A A A A A G A A G A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs260354560
MGI SNP Detail
Alliance Variant
Chr3:30562810 Cpgi13035 within coordinates of
Mecom Intron
Mecom Noncoding-Transcript-Variant
Rr574781 255 bp distal
SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G A G A G G G G G G A A G G A G A G G G G
rs215949467
MGI SNP Detail
Alliance Variant
Chr3:30562812 Cpgi13035 within coordinates of
Mecom Intron
Mecom Noncoding-Transcript-Variant
Rr574781 257 bp distal
SNP C/G/T G G G G G G G G G G G G G G G G G G G G T G G G G G G G G G G G G G G G G G G G G G G G G G C G G G
rs239764899
MGI SNP Detail
Alliance Variant
Chr3:30562816 Cpgi13035 within coordinates of
Mecom Intron
Mecom Noncoding-Transcript-Variant
Rr574781 261 bp distal
SNP C/T C C C C C C C C C C C C C C C C C T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C
rs253041947
MGI SNP Detail
Alliance Variant
Chr3:30562905 Cpgi13035 within coordinates of
Mecom Intron
Mecom Noncoding-Transcript-Variant
Rr574781 350 bp distal
SNP C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C
rs214167061
MGI SNP Detail
Alliance Variant
Chr3:30562933 Cpgi13035 within coordinates of
Mecom Intron
Mecom Noncoding-Transcript-Variant
Rr574781 378 bp distal
SNP A/T A A A A A A A A A A A A A A T A A T A A A A A A A A A A A A A A A A A A A A A A A A
rs232143834
MGI SNP Detail
Alliance Variant
Chr3:30563044 Cpgi13035 within coordinates of
Mecom Intron
Mecom Noncoding-Transcript-Variant
Rr574781 489 bp distal
SNP G/T G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G T G G G
rs247861469
MGI SNP Detail
Alliance Variant
Chr3:30563060 Cpgi13035 within coordinates of
Mecom Intron
Mecom Noncoding-Transcript-Variant
Rr574781 505 bp distal
SNP C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C
rs585738488
MGI SNP Detail
Alliance Variant
Chr3:30563210 Cpgi13035 within coordinates of
Mecom Intron
Mecom Noncoding-Transcript-Variant
Rr574781 655 bp distal
SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C
rs234010485
MGI SNP Detail
Alliance Variant
Chr3:30563442 Cpgi13035 within coordinates of
Mecom Intron
Mecom Noncoding-Transcript-Variant
Rr574781 887 bp distal
SNP A/C C C C C C C C C C C C C C C C C C C A C C A C C C C A C C C C C A C C C C C C A C C C C C C C A C C C C
rs578660673
MGI SNP Detail
Alliance Variant
Chr3:30563469 Cpgi13035 within coordinates of
Mecom Intron
Mecom Noncoding-Transcript-Variant
Rr574781 914 bp distal
SNP C/G C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C G C C C C
rs264067673
MGI SNP Detail
Alliance Variant
Chr3:30563547 Cpgi13035 within coordinates of
Mecom Intron
Mecom Noncoding-Transcript-Variant
Rr574781 992 bp distal
SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs223993016
MGI SNP Detail
Alliance Variant
Chr3:30563548 Cpgi13035 within coordinates of
Mecom Intron
Mecom Noncoding-Transcript-Variant
Rr574781 993 bp distal
SNP A/G G G G G G G G G G G G G G G G G G G G G G G A G G G G G G G G G A G G G G G G A G G G G G G G G G G G
rs249472752
MGI SNP Detail
Alliance Variant
Chr3:30563789 Cpgi13035 within coordinates of
Mecom Intron
Mecom mRNA-UTR
Mecom Noncoding-Transcript-Variant
Rr574781 1234 bp distal
SNP A/G G G G G A G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G G G G G G
rs262534324
MGI SNP Detail
Alliance Variant
Chr3:30564075 Mecom Intron
Rr574781 1520 bp distal
Rr574785 within coordinates of
SNP A/C A A A A A A A A A A A A A A A A A A A C A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A
rs220621319
MGI SNP Detail
Alliance Variant
Chr3:30564101 Mecom Intron
Rr574781 1546 bp distal
Rr574785 within coordinates of
SNP A/T A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A T A A A A
rs582028287
MGI SNP Detail
Alliance Variant
Chr3:30564149 Mecom Intron
Rr574781 1594 bp distal
Rr574785 within coordinates of
SNP A/T A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A T A A A A
rs237667336
MGI SNP Detail
Alliance Variant
Chr3:30564206 Mecom Intron
Rr574781 1651 bp distal
Rr574785 within coordinates of
SNP C/T C C C C C C C C C C C C C C C C C C C C C C T C C C C T C C C C C T C C C C C C T C C C C C C C C C C C C
SNP ID
(GRCm39)
Map Position
(GRCm39)
Gene & Category Variation
Type
Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PL/J
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs257155901
MGI SNP Detail
Alliance Variant
Chr3:30564223 Mecom Intron
Rr574781 1668 bp distal
Rr574785 within coordinates of
SNP A/G G G G G G G G G G G G G G G G G G G G A G G A G G G G A G G G G G A G G G G G G A G G G G G G G A G G G G
rs585082723
MGI SNP Detail
Alliance Variant
Chr3:30564236 Mecom Intron
Rr574781 1681 bp distal
Rr574785 within coordinates of
SNP G/T G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G T G G G G
rs580515465
MGI SNP Detail
Alliance Variant
Chr3:30564238 Mecom Intron
Rr574781 1683 bp distal
Rr574785 within coordinates of
SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs228567751
MGI SNP Detail
Alliance Variant
Chr3:30564242 Mecom Intron
Rr574781 1687 bp distal
Rr574785 within coordinates of
SNP A/G G G G G G G G G G G G G G G G G G G G G G G A G G G G A G G G G G A G G G G G G A G G G G G G G G G G G G
rs30911084
MGI SNP Detail
Alliance Variant
Chr3:30564326 Mecom Intron
Rr574781 1771 bp distal
Rr574785 within coordinates of
SNP C/T C T C C
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Showing SNP(s) 1 - 55 of 55

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Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
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last database update
03/18/2025
MGI 6.24
The Jackson Laboratory