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Mouse SNP Summary
Symbol
Name
ID
Rr574782
regulatory region 574782
MGI:8036914

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Showing SNP(s) 1 - 52 of 52

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SNP ID
(GRCm39)
Map Position
(GRCm39)
Gene & Category Variation
Type
Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PL/J
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs266225918
MGI SNP Detail
Alliance Variant
Chr3:30561083 Mecom Intron
Mecom Noncoding-Transcript-Variant
Rr574782 1862 bp proximal
SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs231976863
MGI SNP Detail
Alliance Variant
Chr3:30561550 Cpgi13035 within coordinates of
Mecom Intron
Mecom Noncoding-Transcript-Variant
Rr574782 1395 bp proximal
SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs258699821
MGI SNP Detail
Alliance Variant
Chr3:30561563 Cpgi13035 within coordinates of
Mecom Intron
Mecom Noncoding-Transcript-Variant
Rr574782 1382 bp proximal
SNP A/G A A A A A A A A A A A A A A A A A A A G A A G A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs214281551
MGI SNP Detail
Alliance Variant
Chr3:30561565 Cpgi13035 within coordinates of
Mecom Intron
Mecom Noncoding-Transcript-Variant
Rr574782 1380 bp proximal
SNP C/T C C C C T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C C C T C T
rs579382313
MGI SNP Detail
Alliance Variant
Chr3:30561638 Cpgi13035 within coordinates of
Mecom Intron
Mecom Noncoding-Transcript-Variant
Rr574782 1307 bp proximal
SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs581610625
MGI SNP Detail
Alliance Variant
Chr3:30561677 Cpgi13035 within coordinates of
Mecom Intron
Mecom Noncoding-Transcript-Variant
Rr574782 1268 bp proximal
SNP A/C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C A C C C C C C C C C C C C C A C C C C
rs231216555
MGI SNP Detail
Alliance Variant
Chr3:30561808 Cpgi13035 within coordinates of
Mecom Intron
Mecom Noncoding-Transcript-Variant
Rr574782 1137 bp proximal
SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs243601034
MGI SNP Detail
Alliance Variant
Chr3:30561825 Cpgi13035 within coordinates of
Mecom Intron
Mecom Noncoding-Transcript-Variant
Rr574782 1120 bp proximal
SNP A/G G G G G G G G G G G G G G G G G G G G A G G A G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G
rs213051648
MGI SNP Detail
Alliance Variant
Chr3:30561864 Cpgi13035 within coordinates of
Mecom Intron
Mecom Noncoding-Transcript-Variant
Rr574782 1081 bp proximal
SNP C/T T T T T T T T T T T T T T T T T T T C T T C T T T T T T T T T T T T T T T T T T T T T T T T T T T T T
rs235740908
MGI SNP Detail
Alliance Variant
Chr3:30561889 Cpgi13035 within coordinates of
Mecom Intron
Mecom Noncoding-Transcript-Variant
Rr574782 1056 bp proximal
SNP C/T T T T T T T T T T T T T T T T T T T T C T T C T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs254232334
MGI SNP Detail
Alliance Variant
Chr3:30561917 Cpgi13035 within coordinates of
Mecom Intron
Mecom Noncoding-Transcript-Variant
Rr574782 1028 bp proximal
SNP A/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T A T T T T
rs218975983
MGI SNP Detail
Alliance Variant
Chr3:30562190 Cpgi13035 within coordinates of
Mecom Intron
Mecom Noncoding-Transcript-Variant
Rr574782 755 bp proximal
SNP A/C A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A C A A A A
rs237775396
MGI SNP Detail
Alliance Variant
Chr3:30562232 Cpgi13035 within coordinates of
Mecom Intron
Mecom Noncoding-Transcript-Variant
Rr574782 713 bp proximal
SNP A/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T A T T T T
rs263317991
MGI SNP Detail
Alliance Variant
Chr3:30562245 Cpgi13035 within coordinates of
Mecom Intron
Mecom Noncoding-Transcript-Variant
Rr574782 700 bp proximal
SNP A/C A A A A A A A A A A A A A A A A A A A C A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A
rs222558802
MGI SNP Detail
Alliance Variant
Chr3:30562278 Cpgi13035 within coordinates of
Mecom Intron
Mecom Noncoding-Transcript-Variant
Rr574782 667 bp proximal
SNP C/T T T T T T T T T T T T T T T T T T T T C T T C T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs238012520
MGI SNP Detail
Alliance Variant
Chr3:30562312 Cpgi13035 within coordinates of
Mecom Intron
Mecom Noncoding-Transcript-Variant
Rr574782 633 bp proximal
SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs247910313
MGI SNP Detail
Alliance Variant
Chr3:30562318 Cpgi13035 within coordinates of
Mecom Intron
Mecom Noncoding-Transcript-Variant
Rr574782 627 bp proximal
SNP A/G G G G G A G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G G G G G G
rs218454117
MGI SNP Detail
Alliance Variant
Chr3:30562386 Cpgi13035 within coordinates of
Mecom Intron
Mecom Noncoding-Transcript-Variant
Rr574782 559 bp proximal
SNP A/G A A A A A A A A A A A A A A A A A A A G A A G A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs240648207
MGI SNP Detail
Alliance Variant
Chr3:30562429 Cpgi13035 within coordinates of
Mecom Intron
Mecom Noncoding-Transcript-Variant
Rr574782 516 bp proximal
SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs264325778
MGI SNP Detail
Alliance Variant
Chr3:30562468 Cpgi13035 within coordinates of
Mecom Intron
Mecom Noncoding-Transcript-Variant
Rr574782 477 bp proximal
SNP G/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T G T T T T
rs232416035
MGI SNP Detail
Alliance Variant
Chr3:30562473 Cpgi13035 within coordinates of
Mecom Intron
Mecom Noncoding-Transcript-Variant
Rr574782 472 bp proximal
SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs246743275
MGI SNP Detail
Alliance Variant
Chr3:30562500 Cpgi13035 within coordinates of
Mecom Intron
Mecom Noncoding-Transcript-Variant
Rr574782 445 bp proximal
SNP A/G A A A A G A G G A G A A A A A A A A A G A A G A A G A G A G A A A G A A A A A A G A A G G A A A G A G G
rs265159179
MGI SNP Detail
Alliance Variant
Chr3:30562598 Cpgi13035 within coordinates of
Mecom Intron
Mecom Noncoding-Transcript-Variant
Rr574782 347 bp proximal
SNP A/G A A A A A A A A A A A A A A A A A A A G A A G A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs226991737
MGI SNP Detail
Alliance Variant
Chr3:30562604 Cpgi13035 within coordinates of
Mecom Intron
Mecom Noncoding-Transcript-Variant
Rr574782 341 bp proximal
SNP A/G G G G G G G G G G G G G G G G G G G G A G G A G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G
rs243588801
MGI SNP Detail
Alliance Variant
Chr3:30562620 Cpgi13035 within coordinates of
Mecom Intron
Mecom Noncoding-Transcript-Variant
Rr574782 325 bp proximal
SNP C/G C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C G C C C C
SNP ID
(GRCm39)
Map Position
(GRCm39)
Gene & Category Variation
Type
Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PL/J
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs212983811
MGI SNP Detail
Alliance Variant
Chr3:30562629 Cpgi13035 within coordinates of
Mecom Intron
Mecom Noncoding-Transcript-Variant
Rr574782 316 bp proximal
SNP A/C C C C C A C A A C A C C C C C C C C C C C C C C C A C C C C C C C C C C C C C C C C C A A C C C C C A A
rs228642374
MGI SNP Detail
Alliance Variant
Chr3:30562716 Cpgi13035 within coordinates of
Mecom Intron
Mecom Noncoding-Transcript-Variant
Rr574782 229 bp proximal
SNP A/G A A A A A A A A A A A A A A A A A A A G A A G A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs260354560
MGI SNP Detail
Alliance Variant
Chr3:30562810 Cpgi13035 within coordinates of
Mecom Intron
Mecom Noncoding-Transcript-Variant
Rr574782 135 bp proximal
SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G A G A G G G G G G A A G G A G A G G G G
rs215949467
MGI SNP Detail
Alliance Variant
Chr3:30562812 Cpgi13035 within coordinates of
Mecom Intron
Mecom Noncoding-Transcript-Variant
Rr574782 133 bp proximal
SNP C/G/T G G G G G G G G G G G G G G G G G G G G T G G G G G G G G G G G G G G G G G G G G G G G G G C G G G
rs239764899
MGI SNP Detail
Alliance Variant
Chr3:30562816 Cpgi13035 within coordinates of
Mecom Intron
Mecom Noncoding-Transcript-Variant
Rr574782 129 bp proximal
SNP C/T C C C C C C C C C C C C C C C C C T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C
rs253041947
MGI SNP Detail
Alliance Variant
Chr3:30562905 Cpgi13035 within coordinates of
Mecom Intron
Mecom Noncoding-Transcript-Variant
Rr574782 40 bp proximal
SNP C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C
rs214167061
MGI SNP Detail
Alliance Variant
Chr3:30562933 Cpgi13035 within coordinates of
Mecom Intron
Mecom Noncoding-Transcript-Variant
Rr574782 12 bp proximal
SNP A/T A A A A A A A A A A A A A A T A A T A A A A A A A A A A A A A A A A A A A A A A A A
rs232143834
MGI SNP Detail
Alliance Variant
Chr3:30563044 Cpgi13035 within coordinates of
Mecom Intron
Mecom Noncoding-Transcript-Variant
Rr574782 78 bp distal
SNP G/T G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G T G G G
rs247861469
MGI SNP Detail
Alliance Variant
Chr3:30563060 Cpgi13035 within coordinates of
Mecom Intron
Mecom Noncoding-Transcript-Variant
Rr574782 94 bp distal
SNP C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C
rs585738488
MGI SNP Detail
Alliance Variant
Chr3:30563210 Cpgi13035 within coordinates of
Mecom Intron
Mecom Noncoding-Transcript-Variant
Rr574782 244 bp distal
SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C
rs234010485
MGI SNP Detail
Alliance Variant
Chr3:30563442 Cpgi13035 within coordinates of
Mecom Intron
Mecom Noncoding-Transcript-Variant
Rr574782 476 bp distal
SNP A/C C C C C C C C C C C C C C C C C C C A C C A C C C C A C C C C C A C C C C C C A C C C C C C C A C C C C
rs578660673
MGI SNP Detail
Alliance Variant
Chr3:30563469 Cpgi13035 within coordinates of
Mecom Intron
Mecom Noncoding-Transcript-Variant
Rr574782 503 bp distal
SNP C/G C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C G C C C C
rs264067673
MGI SNP Detail
Alliance Variant
Chr3:30563547 Cpgi13035 within coordinates of
Mecom Intron
Mecom Noncoding-Transcript-Variant
Rr574782 581 bp distal
SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs223993016
MGI SNP Detail
Alliance Variant
Chr3:30563548 Cpgi13035 within coordinates of
Mecom Intron
Mecom Noncoding-Transcript-Variant
Rr574782 582 bp distal
SNP A/G G G G G G G G G G G G G G G G G G G G G G G A G G G G G G G G G A G G G G G G A G G G G G G G G G G G
rs249472752
MGI SNP Detail
Alliance Variant
Chr3:30563789 Cpgi13035 within coordinates of
Mecom Intron
Mecom mRNA-UTR
Mecom Noncoding-Transcript-Variant
Rr574782 823 bp distal
SNP A/G G G G G A G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G G G G G G
rs262534324
MGI SNP Detail
Alliance Variant
Chr3:30564075 Mecom Intron
Rr574782 1109 bp distal
Rr574785 within coordinates of
SNP A/C A A A A A A A A A A A A A A A A A A A C A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A
rs220621319
MGI SNP Detail
Alliance Variant
Chr3:30564101 Mecom Intron
Rr574782 1135 bp distal
Rr574785 within coordinates of
SNP A/T A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A T A A A A
rs582028287
MGI SNP Detail
Alliance Variant
Chr3:30564149 Mecom Intron
Rr574782 1183 bp distal
Rr574785 within coordinates of
SNP A/T A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A T A A A A
rs237667336
MGI SNP Detail
Alliance Variant
Chr3:30564206 Mecom Intron
Rr574782 1240 bp distal
Rr574785 within coordinates of
SNP C/T C C C C C C C C C C C C C C C C C C C C C C T C C C C T C C C C C T C C C C C C T C C C C C C C C C C C C
rs257155901
MGI SNP Detail
Alliance Variant
Chr3:30564223 Mecom Intron
Rr574782 1257 bp distal
Rr574785 within coordinates of
SNP A/G G G G G G G G G G G G G G G G G G G G A G G A G G G G A G G G G G A G G G G G G A G G G G G G G A G G G G
rs585082723
MGI SNP Detail
Alliance Variant
Chr3:30564236 Mecom Intron
Rr574782 1270 bp distal
Rr574785 within coordinates of
SNP G/T G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G T G G G G
rs580515465
MGI SNP Detail
Alliance Variant
Chr3:30564238 Mecom Intron
Rr574782 1272 bp distal
Rr574785 within coordinates of
SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs228567751
MGI SNP Detail
Alliance Variant
Chr3:30564242 Mecom Intron
Rr574782 1276 bp distal
Rr574785 within coordinates of
SNP A/G G G G G G G G G G G G G G G G G G G G G G G A G G G G A G G G G G A G G G G G G A G G G G G G G G G G G G
rs30911084
MGI SNP Detail
Alliance Variant
Chr3:30564326 Mecom Intron
Rr574782 1360 bp distal
Rr574785 within coordinates of
SNP C/T C T C C
rs265537737
MGI SNP Detail
Alliance Variant
Chr3:30564559 Mecom Intron
Rr574782 1593 bp distal
SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
SNP ID
(GRCm39)
Map Position
(GRCm39)
Gene & Category Variation
Type
Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PL/J
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs232588487
MGI SNP Detail
Alliance Variant
Chr3:30564625 Mecom Intron
Rr574782 1659 bp distal
SNP A/C A A A A A A A A A A A A A A A A A A A A A A C A A A A C A A A A A C A A A A A A C A A A A A A A A A A A A
rs258074119
MGI SNP Detail
Alliance Variant
Chr3:30564764 Mecom Intron
Rr574782 1798 bp distal
SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
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Showing SNP(s) 1 - 52 of 52

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last database update
03/25/2025
MGI 6.24
The Jackson Laboratory