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Mouse SNP Summary
Symbol
Name
ID 		Rr574909
regulatory region 574909
MGI:8037041

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SNP ID
(GRCm39)		 Map Position
(GRCm39)		 Gene & Category Variation
Type		 Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PL/J
PWD/PhJ
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs238337846
MGI SNP Detail
Alliance Variant		 Chr3:31362622 Gm15496 within coordinates of
Rr574909 1988 bp proximal
Slc7a14 Intron
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs253919047
MGI SNP Detail
Alliance Variant		 Chr3:31362672 Gm15496 within coordinates of
Rr574909 1938 bp proximal
Slc7a14 Intron
 SNP G/T T T T T T T T T T T T T T T T T T T T T T T G T T T T G T T T T T G T T T T T T G T T T T T T T T T T T T
rs221297042
MGI SNP Detail
Alliance Variant		 Chr3:31362679 Gm15496 within coordinates of
Rr574909 1931 bp proximal
Slc7a14 Intron
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C T C C C C T C C C C C T C C C C C C T C C C C C C C T C C C C
rs250026936
MGI SNP Detail
Alliance Variant		 Chr3:31362685 Gm15496 within coordinates of
Rr574909 1925 bp proximal
Slc7a14 Intron
 SNP C/T T T T T T T T T T T T T T T T T T T T T T T C T T T T C T T T T T C T T T T T T C T T T T T T T T T T T T
rs264294171
MGI SNP Detail
Alliance Variant		 Chr3:31362747 Gm15496 within coordinates of
Rr574909 1863 bp proximal
Slc7a14 Intron
 SNP C/T C C C C C C C C C C C C C C C C C C C T C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs231890255
MGI SNP Detail
Alliance Variant		 Chr3:31362748 Gm15496 within coordinates of
Rr574909 1862 bp proximal
Slc7a14 Intron
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G A G G G G A G G G G G A G G G G G G A G G G G G G G G G G G G
rs246911195
MGI SNP Detail
Alliance Variant		 Chr3:31362749 Gm15496 within coordinates of
Rr574909 1861 bp proximal
Slc7a14 Intron
 SNP C/T C C C C C C C C C C C C C C C C C C C T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C
rs257241260
MGI SNP Detail
Alliance Variant		 Chr3:31362939 Gm15496 within coordinates of
Rr574909 1671 bp proximal
Slc7a14 Intron
 SNP A/C A A A A A A A A A A A A A A A A A A A C A A C A A A A C A A A A A C A A A A A A C A A A A A A A C A A A A
rs226293784
MGI SNP Detail
Alliance Variant		 Chr3:31363016 Gm15496 within coordinates of
Rr574907 within coordinates of
Rr574909 1594 bp proximal
Slc7a14 Intron
 SNP G/T G G G G G G G G G G G G G G G G G G G G G G T G G G G T G G G G G T G G G G G G T G G G G G G G G G G G G
rs243872929
MGI SNP Detail
Alliance Variant		 Chr3:31363021 Gm15496 within coordinates of
Rr574907 within coordinates of
Rr574909 1589 bp proximal
Slc7a14 Intron
 SNP C/G G G G G G G G G G G G G G G G G G G G C G G C G G G G C G G G G G C G G G G G G C G G G G G G G G G G G G
rs213269635
MGI SNP Detail
Alliance Variant		 Chr3:31363100 Gm15496 within coordinates of
Rr574907 within coordinates of
Rr574909 1510 bp proximal
Slc7a14 Intron
 SNP C/T C C C C C C C C C C C C C C C C C C C T C C T C C C C T C C C C C T C C C C C C T C C C C C C C C C C C C
rs239755871
MGI SNP Detail
Alliance Variant		 Chr3:31363152 Gm15496 within coordinates of
Rr574907 within coordinates of
Rr574909 1458 bp proximal
Slc7a14 Intron
 SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs260479645
MGI SNP Detail
Alliance Variant		 Chr3:31363153 Gm15496 within coordinates of
Rr574907 within coordinates of
Rr574909 1457 bp proximal
Slc7a14 Intron
 SNP C/T C C C C C C C C C C C C C C C C C C C T C C T C C C C T C C C C C T C C C C C C T C C C C C C C T C C C C
rs215903080
MGI SNP Detail
Alliance Variant		 Chr3:31363166 Gm15496 within coordinates of
Rr574907 within coordinates of
Rr574909 1444 bp proximal
Slc7a14 Intron
 SNP A/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T A T T T T
rs241313154
MGI SNP Detail
Alliance Variant		 Chr3:31363168 Gm15496 within coordinates of
Rr574907 within coordinates of
Rr574909 1442 bp proximal
Slc7a14 Intron
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs249726258
MGI SNP Detail
Alliance Variant		 Chr3:31363181 Gm15496 within coordinates of
Rr574907 within coordinates of
Rr574909 1429 bp proximal
Slc7a14 Intron
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs220089763
MGI SNP Detail
Alliance Variant		 Chr3:31363216 Gm15496 within coordinates of
Rr574907 within coordinates of
Rr574909 1394 bp proximal
Slc7a14 Intron
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs230089214
MGI SNP Detail
Alliance Variant		 Chr3:31363347 Cpgi13053 within coordinates of
Gm15496 within coordinates of
Rr574907 within coordinates of
Rr574909 1263 bp proximal
Slc7a14 Intron
 SNP A/G A A A A A A A A A A A A A A A A A A A G A G G A A A A G A A A A A G A A A A A A G A A A A A A A G A G A G
rs248137422
MGI SNP Detail
Alliance Variant		 Chr3:31363413 Cpgi13053 within coordinates of
Gm15496 within coordinates of
Rr574907 within coordinates of
Rr574909 1197 bp proximal
Slc7a14 Intron
 SNP C/G C C C C C C C C C C C C C C C C C C C G C C G C C C C G C C C C G C C C C C C G C C C C C C C C C C C C
rs221068346
MGI SNP Detail
Alliance Variant		 Chr3:31363439 Cpgi13053 within coordinates of
Gm15496 within coordinates of
Rr574907 within coordinates of
Rr574909 1171 bp proximal
Slc7a14 Intron
 SNP A/C C C C C C C C C C C C C C C C C C C C A C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C
rs247259686
MGI SNP Detail
Alliance Variant		 Chr3:31363450 Cpgi13053 within coordinates of
Gm15496 within coordinates of
Rr574907 within coordinates of
Rr574909 1160 bp proximal
Slc7a14 Intron
 SNP A/C A A A A A A A A A A A A A A A A A A A C A A C A A A A C A A A A A C A A A A A A C A A A A A A A C A A A A
rs264149788
MGI SNP Detail
Alliance Variant		 Chr3:31363484 Cpgi13053 within coordinates of
Gm15496 within coordinates of
Rr574907 within coordinates of
Rr574909 1126 bp proximal
Slc7a14 Intron
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C T C C C C T C C C C C T C C C C C C T C C C C C C C C C C C C
rs223954429
MGI SNP Detail
Alliance Variant		 Chr3:31363582 Cpgi13053 within coordinates of
Gm15496 within coordinates of
Rr574907 within coordinates of
Rr574909 1028 bp proximal
Slc7a14 Intron
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs241072609
MGI SNP Detail
Alliance Variant		 Chr3:31363605 Cpgi13053 within coordinates of
Gm15496 within coordinates of
Rr574907 within coordinates of
Rr574909 1005 bp proximal
Slc7a14 Intron
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs257369666
MGI SNP Detail
Alliance Variant		 Chr3:31363638 Cpgi13053 within coordinates of
Gm15496 within coordinates of
Rr574907 within coordinates of
Rr574909 972 bp proximal
Slc7a14 Intron
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C T C C C C T C C C C C T C C C C C C T C C C C C C C C C C C C
SNP ID
(GRCm39)		 Map Position
(GRCm39)		 Gene & Category Variation
Type		 Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PL/J
PWD/PhJ
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs226223541
MGI SNP Detail
Alliance Variant		 Chr3:31363643 Cpgi13053 within coordinates of
Gm15496 within coordinates of
Rr574907 within coordinates of
Rr574909 967 bp proximal
Slc7a14 Intron
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G A G G G G G G G G G G G G G G G G G A G G G G G G G G G G G G
rs236901655
MGI SNP Detail
Alliance Variant		 Chr3:31363660 Cpgi13053 within coordinates of
Gm15496 within coordinates of
Rr574907 within coordinates of
Rr574909 950 bp proximal
Slc7a14 Intron
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs262132508
MGI SNP Detail
Alliance Variant		 Chr3:31363666 Cpgi13053 within coordinates of
Gm15496 within coordinates of
Rr574907 within coordinates of
Rr574909 944 bp proximal
Slc7a14 Intron
 SNP G/T G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G T G G G G
rs234501858
MGI SNP Detail
Alliance Variant		 Chr3:31363671 Cpgi13053 within coordinates of
Gm15496 within coordinates of
Rr574907 within coordinates of
Rr574909 939 bp proximal
Slc7a14 Intron
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs254923958
MGI SNP Detail
Alliance Variant		 Chr3:31363737 Cpgi13053 within coordinates of
Gm15496 within coordinates of
Rr574907 within coordinates of
Rr574909 873 bp proximal
Slc7a14 Intron
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs216524584
MGI SNP Detail
Alliance Variant		 Chr3:31363754 Cpgi13053 within coordinates of
Gm15496 within coordinates of
Rr574907 within coordinates of
Rr574909 856 bp proximal
Slc7a14 Intron
 SNP C/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G C G G G G
rs232679234
MGI SNP Detail
Alliance Variant		 Chr3:31363789 Cpgi13053 within coordinates of
Gm15496 within coordinates of
Rr574907 within coordinates of
Rr574909 821 bp proximal
Slc7a14 Intron
 SNP C/T T T T T T T T T T T T T T T T T T T T T T T C T T T T C T T T T T C T T T T T T C T T T T T T T C T T T T
rs243976746
MGI SNP Detail
Alliance Variant		 Chr3:31363820 Cpgi13053 within coordinates of
Gm15496 within coordinates of
Rr574907 within coordinates of
Rr574909 790 bp proximal
Slc7a14 Intron
 SNP A/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T A T T T T
rs214611291
MGI SNP Detail
Alliance Variant		 Chr3:31363828 Cpgi13053 within coordinates of
Gm15496 within coordinates of
Rr574907 within coordinates of
Rr574909 782 bp proximal
Slc7a14 Intron
 SNP A/T A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A T A A A A
rs230029202
MGI SNP Detail
Alliance Variant		 Chr3:31363863 Cpgi13053 within coordinates of
Gm15496 within coordinates of
Rr574907 within coordinates of
Rr574909 747 bp proximal
Slc7a14 Intron
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C T C C C C T C C C C C T C C C C C C T C C C C C C C C C C C C
rs249002422
MGI SNP Detail
Alliance Variant		 Chr3:31363921 Cpgi13053 within coordinates of
Gm15496 within coordinates of
Rr574907 within coordinates of
Rr574909 689 bp proximal
Slc7a14 Intron
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs212758033
MGI SNP Detail
Alliance Variant		 Chr3:31363924 Cpgi13053 within coordinates of
Gm15496 within coordinates of
Rr574907 within coordinates of
Rr574909 686 bp proximal
Slc7a14 Intron
 SNP G/T G G G G G G G G G G G G G G G G G G G G G G T G G G G G G G G G G G G G G G G G T G G G G G G G G G G G G
rs242070684
MGI SNP Detail
Alliance Variant		 Chr3:31363939 Cpgi13053 within coordinates of
Gm15496 within coordinates of
Rr574907 within coordinates of
Rr574909 671 bp proximal
Slc7a14 Intron
 SNP A/T A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A T A A A A
rs260899257
MGI SNP Detail
Alliance Variant		 Chr3:31364030 Cpgi13053 within coordinates of
Gm15496 within coordinates of
Rr574907 within coordinates of
Rr574909 580 bp proximal
Slc7a14 Intron
 SNP A/G A A A A A A A A A A A A A A A A A A A A A A G A A A A G A A A A A G A A A A A A G A A A A A A A G A A A A
rs224038201
MGI SNP Detail
Alliance Variant		 Chr3:31364087 Cpgi13053 within coordinates of
Gm15496 within coordinates of
Rr574907 within coordinates of
Rr574909 523 bp proximal
Slc7a14 Intron
 SNP A/C A A A A A A A A A A A A A A A A A A A A A A C A A A A C A A A A A C A A A A A A C A A A A A A A C A A A A
rs241180502
MGI SNP Detail
Alliance Variant		 Chr3:31364098 Cpgi13053 within coordinates of
Gm15496 within coordinates of
Rr574907 within coordinates of
Rr574909 512 bp proximal
Slc7a14 Intron
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G A G G G G A G G G G G G G G G G G A G G G G G G G G G G G G
rs250994763
MGI SNP Detail
Alliance Variant		 Chr3:31364105 Cpgi13053 within coordinates of
Gm15496 within coordinates of
Rr574907 within coordinates of
Rr574909 505 bp proximal
Slc7a14 Intron
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C T C C C C T C C C C C C C C C C C T C C C C C C C C C C C C
rs220080125
MGI SNP Detail
Alliance Variant		 Chr3:31364115 Cpgi13053 within coordinates of
Gm15496 within coordinates of
Rr574907 within coordinates of
Rr574909 495 bp proximal
Slc7a14 Intron
 SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs236839781
MGI SNP Detail
Alliance Variant		 Chr3:31364118 Cpgi13053 within coordinates of
Gm15496 within coordinates of
Rr574907 within coordinates of
Rr574909 492 bp proximal
Slc7a14 Intron
 SNP A/G A A A A A A A A A A A A A A A A A A A A A A G A A A A G A A A A A G A A A A A A G A A A A A A A G A A A A
rs264777417
MGI SNP Detail
Alliance Variant		 Chr3:31364125 Cpgi13053 within coordinates of
Gm15496 within coordinates of
Rr574907 within coordinates of
Rr574909 485 bp proximal
Slc7a14 Intron
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs233426088
MGI SNP Detail
Alliance Variant		 Chr3:31364150 Cpgi13053 within coordinates of
Gm15496 within coordinates of
Rr574907 within coordinates of
Rr574909 460 bp proximal
Slc7a14 Intron
Slc7a14 mRNA-UTR
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs251848668
MGI SNP Detail
Alliance Variant		 Chr3:31364157 Cpgi13053 within coordinates of
Gm15496 within coordinates of
Rr574907 within coordinates of
Rr574909 453 bp proximal
Slc7a14 Intron
Slc7a14 mRNA-UTR
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G A G G G G A G G G G G A G G G G G G A G G G G G G G G G G G G
rs263372028
MGI SNP Detail
Alliance Variant		 Chr3:31364163 Cpgi13053 within coordinates of
Gm15496 within coordinates of
Rr574907 within coordinates of
Rr574909 447 bp proximal
Slc7a14 Intron
Slc7a14 mRNA-UTR
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs227807387
MGI SNP Detail
Alliance Variant		 Chr3:31364201 Cpgi13053 within coordinates of
Gm15496 within coordinates of
Rr574907 within coordinates of
Rr574909 409 bp proximal
Slc7a14 Intron
Slc7a14 mRNA-UTR
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C T C C C C T C C C C C T C C C C C C T C C C C C C C C C C C C
rs244100590
MGI SNP Detail
Alliance Variant		 Chr3:31364217 Cpgi13053 within coordinates of
Gm15496 within coordinates of
Rr574907 within coordinates of
Rr574909 393 bp proximal
Slc7a14 Intron
Slc7a14 mRNA-UTR
 SNP A/G A A A A A A A A A A A A A A A A A A A A A A G A A A A G A A A A A G A A A A A A G A A A A A A A G A A A A
SNP ID
(GRCm39)		 Map Position
(GRCm39)		 Gene & Category Variation
Type		 Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PL/J
PWD/PhJ
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs214547742
MGI SNP Detail
Alliance Variant		 Chr3:31364246 Cpgi13053 within coordinates of
Gm15496 within coordinates of
Rr574907 within coordinates of
Rr574909 364 bp proximal
Slc7a14 Intron
Slc7a14 mRNA-UTR
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G A G G G G A G G G G A G G G G G G A G G G G G G G G G G G G
rs223646109
MGI SNP Detail
Alliance Variant		 Chr3:31364351 Cpgi13053 within coordinates of
Gm15496 within coordinates of
Rr574907 within coordinates of
Rr574909 259 bp proximal
Slc7a14 Intron
Slc7a14 mRNA-UTR
 SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs249934335
MGI SNP Detail
Alliance Variant		 Chr3:31364372 Cpgi13053 within coordinates of
Gm15496 within coordinates of
Rr574907 within coordinates of
Rr574909 238 bp proximal
Slc7a14 Intron
Slc7a14 mRNA-UTR
Tssr32914 within coordinates of
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs218186406
MGI SNP Detail
Alliance Variant		 Chr3:31364378 Cpgi13053 within coordinates of
Gm15496 within coordinates of
Rr574907 within coordinates of
Rr574909 232 bp proximal
Slc7a14 Intron
Slc7a14 mRNA-UTR
Tssr32914 within coordinates of
 SNP C/G G G G G G G G G G G G G G G G G G G G G G G C G G G G C G G G G G C G G G G G G C G G G G G G G C G G G G
rs240444392
MGI SNP Detail
Alliance Variant		 Chr3:31364421 Cpgi13053 within coordinates of
Gm15496 within coordinates of
Rr574907 within coordinates of
Rr574909 189 bp proximal
Slc7a14 Intron
Slc7a14 mRNA-UTR
Tssr32916 within coordinates of
 SNP A/G A A A A A A A A A A A A A A A A A A A G A G G A A A A G A A A A A G A A A A A A G A A A A A A A G A G A G
rs260124191
MGI SNP Detail
Alliance Variant		 Chr3:31364431 Cpgi13053 within coordinates of
Gm15496 within coordinates of
Rr574907 within coordinates of
Rr574909 179 bp proximal
Slc7a14 Intron
Slc7a14 mRNA-UTR
Tssr32916 within coordinates of
 SNP C/T T T T T T T T T T T T T T T T T T T T C T C C T T T T C T T T T T C T T T T T T C T T T T T T T C T C T C
rs215741132
MGI SNP Detail
Alliance Variant		 Chr3:31364495 Cpgi13053 within coordinates of
Gm15496 within coordinates of
Rr574907 within coordinates of
Rr574909 115 bp proximal
Slc7a14 Intron
Slc7a14 mRNA-UTR
 SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T T T C T T T T T T T T T T T T
rs234616225
MGI SNP Detail
Alliance Variant		 Chr3:31364519 Cpgi13053 within coordinates of
Gm15496 within coordinates of
Rr574908 within coordinates of
Rr574909 91 bp proximal
Slc7a14 Intron
Slc7a14 mRNA-UTR
Tssr32917 within coordinates of
 SNP A/G G G G G G G G G G G G G G G G G G G G G G A G G G G G G G G G A G G G G G G A G G G G G G G G G G G G
rs251128749
MGI SNP Detail
Alliance Variant		 Chr3:31364590 Gm15496 within coordinates of
Rr574908 within coordinates of
Rr574909 20 bp proximal
Slc7a14 Intron
 SNP T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T
rs220020138
MGI SNP Detail
Alliance Variant		 Chr3:31364612 Gm15496 within coordinates of
Rr574909 within coordinates of
Slc7a14 Intron
 SNP A/C C C C A C C C C C C C C C C
rs256088110
MGI SNP Detail
Alliance Variant		 Chr3:31364631 Gm15496 within coordinates of
Rr574909 within coordinates of
Slc7a14 Intron
 SNP A/T T T T T T T T T T T T T T A T T T T T T T T T T T T T T T T T T T
rs225774989
MGI SNP Detail
Alliance Variant		 Chr3:31364652 Gm15496 within coordinates of
Rr574909 within coordinates of
Slc7a14 mRNA-UTR
 SNP C/T C C C C C C C C C C C C C C C C C C C T C C C C C C C C C C C C C C C C C C C C C C C C
rs583182313
MGI SNP Detail
Alliance Variant		 Chr3:31364677 Gm15496 within coordinates of
Rr574909 within coordinates of
Slc7a14 mRNA-UTR
 SNP C/T T T T T T T T T T T T T T T T T T T T T C T T T T T T T T T T T T T C T T T T T T T T T T T T
rs248076930
MGI SNP Detail		 Chr3:31364782 Gm15496 within coordinates of
Rr574909 within coordinates of
 SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs265594149
MGI SNP Detail		 Chr3:31364857 Gm15496 within coordinates of
Rr574909 within coordinates of
 SNP A/C A A A A A A A A A A A A A A A A A A A C A C C A A A A A A A A A C A A A A A A C A A A A A A A C A C A C
rs221701848
MGI SNP Detail		 Chr3:31364872 Gm15496 within coordinates of
Rr574909 within coordinates of
 SNP A/T T T T T T T T T T T T T T T T T T T T T T T A T T T T A T T T T T A T T T T T T A T T T T T T T A T T T T
rs585335917
MGI SNP Detail		 Chr3:31364902 Gm15496 within coordinates of
Rr574909 within coordinates of
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C T C C C C T C C C C C T C C C C C C T C C C C C C C C C C C C
rs580446774
MGI SNP Detail		 Chr3:31364904 Gm15496 within coordinates of
Rr574909 within coordinates of
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs237813007
MGI SNP Detail		 Chr3:31364973 Gm15496 within coordinates of
Rr574909 within coordinates of
 SNP A/G A A A A A A A A A A A A A A A A A A A G A A G A A A A G A A A A A G A A A A A A G A A A A A A A G A A A A
rs256638833
MGI SNP Detail		 Chr3:31365023 Gm15496 within coordinates of
Rr574909 within coordinates of
 SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs223776495
MGI SNP Detail		 Chr3:31365067 Gm15496 within coordinates of
Rr574909 within coordinates of
 SNP A/G G G G G G G G G G G G G G G G G G G G A G G A G G G G G G G G G A G G G G G G A G G G G G G G G G G G G
rs254393913
MGI SNP Detail		 Chr3:31365078 Gm15496 within coordinates of
Rr574909 within coordinates of
 SNP C/T C C C C C C C C C C C C C C C C C C C T C C T C C C C C C C C C C C C C C C T C C C C C C C C C C C C
rs264121955
MGI SNP Detail		 Chr3:31365079 Gm15496 within coordinates of
Rr574909 within coordinates of
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs235042070
MGI SNP Detail		 Chr3:31365150 Gm15496 within coordinates of
Rr574909 55 bp distal
 SNP G/T G G G G G G G G G G G G G G G G G G G T G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G
rs252351088
MGI SNP Detail		 Chr3:31365178 Gm15496 within coordinates of
Rr574909 83 bp distal
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C T C C C C C C C C C T C C C C C C T C C C C C C C C C C C C
SNP ID
(GRCm39)		 Map Position
(GRCm39)		 Gene & Category Variation
Type		 Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PL/J
PWD/PhJ
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs215126832
MGI SNP Detail		 Chr3:31365179 Gm15496 within coordinates of
Rr574909 84 bp distal
 SNP A/G G G G G G G G G G G G G G G G G G G G A G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G
rs234752639
MGI SNP Detail		 Chr3:31365188 Gm15496 within coordinates of
Rr574909 93 bp distal
 SNP A/G G G G G G G G G G G G G G G G G G G G A G G A G G G G G G G G G A G G G G G G A G G G G G G G A G G G G
rs244839063
MGI SNP Detail		 Chr3:31365193 Gm15496 within coordinates of
Rr574909 98 bp distal
 SNP C/G G G G G G G G G G G G G G G G G G G G G G G C G G G G G G G G G C G G G G G G C G G G G G G G G G G G G
rs584039401
MGI SNP Detail		 Chr3:31365289 Gm15496 within coordinates of
Rr574909 194 bp distal
 SNP A/C C C C C C C C C C C C C C C C C C C C C C C A C C C C C C C C C A C C C C C C A C C C C C C C C C C C C
rs214268951
MGI SNP Detail		 Chr3:31365306 Gm15496 within coordinates of
Rr574909 211 bp distal
 SNP A/C A A A A A A A A A A A A A A A A A A A C A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A
rs234597083
MGI SNP Detail		 Chr3:31365322 Gm15496 within coordinates of
Rr574909 227 bp distal
 SNP A/G A A A A A A A A A A A A A A A A A A A G A A G A A A A G A A A A A G A A A A A A G A A A A A A A A A A A A
rs261354292
MGI SNP Detail		 Chr3:31365398 Gm15496 within coordinates of
Rr574909 303 bp distal
 SNP A/G G G G G G G G G G G G G G G G G G G G A G G A G G G G A G G G G G A G G G G G G A G G G G G G G G G G G G
rs225551309
MGI SNP Detail		 Chr3:31365400 Gm15496 within coordinates of
Rr574909 305 bp distal
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs242633367
MGI SNP Detail		 Chr3:31365412 Gm15496 within coordinates of
Rr574909 317 bp distal
 SNP C/T C C C C C C C C C C C C C C C C C C C T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C
rs258330788
MGI SNP Detail		 Chr3:31365424 Gm15496 within coordinates of
Rr574909 329 bp distal
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs221659559
MGI SNP Detail		 Chr3:31365444 Gm15496 within coordinates of
Rr574909 349 bp distal
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs237950732
MGI SNP Detail		 Chr3:31365464 Gm15496 within coordinates of
Rr574909 369 bp distal
 SNP A/T A A A A A A A A A A A A A A A A A A A T A A T A A A A T A A A A A T A A A A A A T A A A A A A A A A A A A
rs256806447
MGI SNP Detail		 Chr3:31365486 Gm15496 within coordinates of
Rr574909 391 bp distal
 SNP C/T T T T T T T T T T T T T T T T T T T T C T T C T T T T C T T T T T C T T T T T T C T T T T T T T C T T T T
rs218185621
MGI SNP Detail		 Chr3:31365497 Gm15496 within coordinates of
Rr574909 402 bp distal
 SNP C/T C C C C C C C C C C C C C C C C C C C T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C
rs242540421
MGI SNP Detail		 Chr3:31365626 Gm15496 within coordinates of
Rr574909 531 bp distal
 SNP G/T T T T T T T T T T T T T T T T T T T T G T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T
rs265961222
MGI SNP Detail		 Chr3:31365656 Gm15496 within coordinates of
Rr574909 561 bp distal
 SNP C/G G G G G G G G G G G G G G G G G G G G C G C C G G G G C G G G G G C G G G G G G C G G G G G G G C G C G C
rs234054722
MGI SNP Detail		 Chr3:31365721 Gm15496 within coordinates of
Rr574909 626 bp distal
 SNP A/G A A A A A A A A A A A A A A A A A A A G A G G A A A A G A A A A A G A A A A A A G A A A A A A A G A G A G
rs257286002
MGI SNP Detail		 Chr3:31365737 Gm15496 within coordinates of
Rr574909 642 bp distal
 SNP A/C/T T T T T T T T T T T T T T T T T T T T T T T C T T T T A T T T T T A T T T T T T C T T T T T T T T T T T T
rs260004595
MGI SNP Detail		 Chr3:31365772 Gm15496 within coordinates of
Rr574909 677 bp distal
 SNP G/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T G T T T T
rs225890911
MGI SNP Detail		 Chr3:31365800 Gm15496 within coordinates of
Rr574909 705 bp distal
 SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs244977224
MGI SNP Detail		 Chr3:31365823 Gm15496 within coordinates of
Rr574909 728 bp distal
 SNP G/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T G T T T T
rs214401993
MGI SNP Detail		 Chr3:31365842 Gm15496 within coordinates of
Rr574909 747 bp distal
 SNP A/C A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A C A A A A
rs227947684
MGI SNP Detail		 Chr3:31365875 Gm15496 within coordinates of
Rr574909 780 bp distal
 SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs249787446
MGI SNP Detail		 Chr3:31365901 Gm15496 within coordinates of
Rr574909 806 bp distal
 SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs217773993
MGI SNP Detail		 Chr3:31365914 Gm15496 within coordinates of
Rr574909 819 bp distal
 SNP G/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T G T T T T
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Showing SNP(s) 1 - 100 of 126
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
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Send questions and comments to User Support. 		last database update
03/25/2025
MGI 6.24 		The Jackson Laboratory