Rr575484 Mouse SNP Summary

Mouse SNP Summary

Symbol
Name
ID

Rr575484
regulatory region 575484
MGI:8037616

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Showing SNP(s) 1 - 35 of 35

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SNP ID (GRCm39)	Map Position (GRCm39)	Gene & Category	Variation Type	Allele Summary (all strains)	129S1/SvImJ	129X1/SvJ	A/J	AKR/J	B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ	BALB/cByJ	BALB/cJ	BTBR T<+> Itpr3<tf>/J	BUB/BnJ	C3H/HeJ	C57BL/10J	C57BL/10SnJ	C57BL/6J	C57BL/6NJ	C57BR/cdJ	C57L/J	C58/J	CAST/EiJ	CZECHII/EiJ	DBA/2J	FVB/NJ	JF1/MsJ	KK/HlJ	LG/J	MOLF/EiJ	MSM/Ms	NOD/ShiLtJ	NON/ShiLtJ	NZW/LacJ	PWD/PhJ	PWK/PhJ	SEA/GnJ	SM/J	WSB/EiJ
rs3162574 MGI SNP Detail Alliance Variant	Chr3:37520678	Afg2a Intron Rr575484 1824 bp proximal	SNP	A/C		C	C										A							C				C		A							C
rs3158641 MGI SNP Detail Alliance Variant	Chr3:37520761	Afg2a Intron Rr575484 1741 bp proximal	SNP	A/G		G	G										A							G				G		A							G
rs3158642 MGI SNP Detail Alliance Variant	Chr3:37520774	Afg2a Intron Rr575484 1728 bp proximal	SNP	C/T		C	C																					C		T							C
rs47778107 MGI SNP Detail Alliance Variant	Chr3:37521028	Afg2a Intron Rr575484 1474 bp proximal	SNP	G		G	G																					G									G
rs47854402 MGI SNP Detail Alliance Variant	Chr3:37521037	Afg2a Intron Rr575484 1465 bp proximal	SNP	C		C	C																	C				C									C
rs46836229 MGI SNP Detail Alliance Variant	Chr3:37521340	Afg2a Intron Rr575484 1162 bp proximal	SNP	C			C																	C				C									C
rs45767703 MGI SNP Detail Alliance Variant	Chr3:37521349	Afg2a Intron Rr575484 1153 bp proximal	SNP	T			T																	T				T									T
rs50920846 MGI SNP Detail Alliance Variant	Chr3:37521374	Afg2a Intron Rr575484 1128 bp proximal	SNP	C		C	C																	C				C									C
rs45932533 MGI SNP Detail Alliance Variant	Chr3:37521413	Afg2a Intron Rr575484 1089 bp proximal	SNP	A		A	A																	A				A									A
rs3158643 MGI SNP Detail Alliance Variant	Chr3:37521507	Afg2a Intron Rr575484 995 bp proximal	SNP	A		A	A																	A				A									A
rs3158644 MGI SNP Detail Alliance Variant	Chr3:37521558	Afg2a Intron Rr575484 944 bp proximal	SNP	G		G	G																	G				G									G
rs3158645 MGI SNP Detail Alliance Variant	Chr3:37521568	Afg2a Intron Rr575484 934 bp proximal	SNP	T		T	T																	T				T									T
rs30078096 MGI SNP Detail Alliance Variant	Chr3:37521588	Afg2a Intron Rr575484 914 bp proximal	SNP	G/T	T		T	T		T		T		T								G		T	T		T		T		T		T	T				T
rs30078099 MGI SNP Detail Alliance Variant	Chr3:37521690	Afg2a Intron Rr575484 812 bp proximal	SNP	C/T	C		C	C		T		C		C								C		T	T		T		T		T		C	T				C
rs3158646 MGI SNP Detail Alliance Variant	Chr3:37522009	Afg2a Intron Rr575484 493 bp proximal	SNP	T		T	T																					T									T
rs3158647 MGI SNP Detail Alliance Variant	Chr3:37522015	Afg2a Intron Rr575484 487 bp proximal	SNP	T		T	T																					T									T
rs30078102 MGI SNP Detail Alliance Variant	Chr3:37522056	Afg2a Intron Rr575484 446 bp proximal	SNP	C/T	T	T	C	T		T		T		C								T		T	T		T		T		T		T	T				C
rs3158648 MGI SNP Detail Alliance Variant	Chr3:37522118	Afg2a Intron Rr575484 384 bp proximal	SNP	C/T	C	C	C	C		T		C		C			T					C		C	T		T	C	T		C		C	T			C	C
rs3158649 MGI SNP Detail Alliance Variant	Chr3:37522147	Afg2a Intron Rr575484 355 bp proximal	SNP	G/T	G	G	G										T							G				G									G
rs3162575 MGI SNP Detail Alliance Variant	Chr3:37522319	Afg2a Intron Rr575484 183 bp proximal	SNP	A/G	A	A	A										G							A				A									A
rs30079077 MGI SNP Detail Alliance Variant	Chr3:37522457	Afg2a Intron Rr575484 45 bp proximal	SNP	A/G	G	G	A	G		G		G		A			G					G		G	G		G		G		G		G	G				A
rs3158650 MGI SNP Detail Alliance Variant	Chr3:37522932	Afg2a Intron Rr575484 409 bp distal	SNP	C/G			C	C		G		C		C								G			G		G	C	G					G			C	C
rs578425461 MGI SNP Detail Alliance Variant	Chr3:37522985	Afg2a Intron Rr575484 462 bp distal	SNP	G					G	G	G		G		G	G	G	G	G	G	G		G		G	G	G		G						G	G
rs581910499 MGI SNP Detail Alliance Variant	Chr3:37522986	Afg2a Intron Rr575484 463 bp distal	SNP	G					G	G	G		G		G	G	G	G	G	G	G		G		G	G	G		G			G			G	G
rs30079082 MGI SNP Detail Alliance Variant	Chr3:37523231	Afg2a Intron Rr575484 708 bp distal	SNP	A/T	T		T	T		T		T		T								A		T	T		T		T		T		T	T				T
SNP ID (GRCm39)	Map Position (GRCm39)	Gene & Category	Variation Type	Allele Summary (all strains)	129S1/SvImJ	129X1/SvJ	A/J	AKR/J	B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ	BALB/cByJ	BALB/cJ	BTBR T<+> Itpr3<tf>/J	BUB/BnJ	C3H/HeJ	C57BL/10J	C57BL/10SnJ	C57BL/6J	C57BL/6NJ	C57BR/cdJ	C57L/J	C58/J	CAST/EiJ	CZECHII/EiJ	DBA/2J	FVB/NJ	JF1/MsJ	KK/HlJ	LG/J	MOLF/EiJ	MSM/Ms	NOD/ShiLtJ	NON/ShiLtJ	NZW/LacJ	PWD/PhJ	PWK/PhJ	SEA/GnJ	SM/J	WSB/EiJ
rs30080175 MGI SNP Detail Alliance Variant	Chr3:37523297	Afg2a Intron Rr575484 774 bp distal	SNP	A/G	G		G	G		G		G		G								A		G	G		G		G		G		G	G				G
rs3158651 MGI SNP Detail Alliance Variant	Chr3:37523458	Afg2a Intron Rr575484 935 bp distal	SNP	A		A																		A				A									A
rs3162576 MGI SNP Detail Alliance Variant	Chr3:37523576	Afg2a Intron Rr575484 1053 bp distal	SNP	G																								G									G
rs30080178 MGI SNP Detail Alliance Variant	Chr3:37523662	Afg2a Intron Rr575484 1139 bp distal Rr575486 within coordinates of	SNP	A/C	C		C	C		C		C		C								A		C	C		C		C		C		C	C				C
rs3158652 MGI SNP Detail Alliance Variant	Chr3:37523707	Afg2a Intron Rr575484 1184 bp distal Rr575486 within coordinates of	SNP	C/T	T	T	C																	T				T									T
rs3158653 MGI SNP Detail Alliance Variant	Chr3:37523820	Afg2a Intron Rr575484 1297 bp distal	SNP	A/G	A	A	G	A		G		A		G								G		A	G		G	A	G		A		A	G			A	G
rs3162577 MGI SNP Detail Alliance Variant	Chr3:37523833	Afg2a Intron Rr575484 1310 bp distal	SNP	A/G	G	G	G	G		A		G		G								G		G	A		A	G	A		G		G	A			G	G
rs45904362 MGI SNP Detail Alliance Variant	Chr3:37524186	Afg2a Intron Rr575484 1663 bp distal	SNP	C		C	C																	C				C									C
rs51092647 MGI SNP Detail Alliance Variant	Chr3:37524248	Afg2a Intron Rr575484 1725 bp distal	SNP	G			G																					G									G
rs3158654 MGI SNP Detail Alliance Variant	Chr3:37524484	Afg2a Intron Rr575484 1961 bp distal	SNP	A/G	A	A	A	A		G				A			G					G		A	G			A	G		A		A	G			A	A

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Contributing Projects: Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
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