Rr575488 Mouse SNP Summary

Mouse SNP Summary

Symbol
Name
ID

Rr575488
regulatory region 575488
MGI:8037620

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Showing SNP(s) 1 - 26 of 26

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SNP ID (GRCm39)	Map Position (GRCm39)	Gene & Category	Variation Type	Allele Summary (all strains)	129S1/SvImJ	129X1/SvJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3<tf>/J	C3H/HeJ	C57BL/6J	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	LG/J	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	SM/J	WSB/EiJ
rs30062105 MGI SNP Detail Alliance Variant	Chr3:37524800	Afg2a Intron Rr575488 1993 bp proximal	SNP	A/G	G	G	A	G	G	G	A	G	G	G	G	G		G	G	G	G		A
rs3162578 MGI SNP Detail Alliance Variant	Chr3:37524962	Afg2a Intron Rr575488 1831 bp proximal	SNP	G/T	G	G	G	G	T	G	G	T		G	T	T	G	T	G	G	T	G	G
rs30074485 MGI SNP Detail Alliance Variant	Chr3:37525069	Afg2a Intron Rr575488 1724 bp proximal	SNP	A/G	G	G	A	G	G	G	A	G	G	G	G	G		G	G	G	G		A
rs3162579 MGI SNP Detail Alliance Variant	Chr3:37525135	Afg2a Intron Rr575488 1658 bp proximal	SNP	C/T	T	T	T	T	C	T	T	C	C	T	C	C	T	C	T	T	C	T	T
rs3162580 MGI SNP Detail Alliance Variant	Chr3:37525216	Afg2a Intron Rr575488 1577 bp proximal	SNP	A/G	A	A	A	A	G	A	A	G	G	A	G	G	A	G	A	A	G	A	A
rs3162581 MGI SNP Detail Alliance Variant	Chr3:37525347	Afg2a Intron Rr575488 1446 bp proximal	SNP	C/G	G	G	C	C	C	G	C		C	C	C	C		C	G	G	C		C
rs3158656 MGI SNP Detail Alliance Variant	Chr3:37525453	Afg2a Intron Rr575488 1340 bp proximal	SNP	C/T	C	C	C	C	T	C	C	T	C	C	T	T	C	T	C	C	T	C	C
rs3158658 MGI SNP Detail Alliance Variant	Chr3:37525795	Afg2a Intron Rr575488 998 bp proximal	SNP	A/G	G	G	G	G	A	G	G		G	G	A	A	G	A	G	G	A	G	G
rs3162582 MGI SNP Detail Alliance Variant	Chr3:37525901	Afg2a Intron Rr575488 892 bp proximal	SNP	A		A	A							A			A					A
rs3158659 MGI SNP Detail Alliance Variant	Chr3:37526085	Afg2a Intron Rr575488 708 bp proximal	SNP	A/G	A	A	A	A	G	A	A		G	A	G	G	A	G		A	G	A	A
rs30075800 MGI SNP Detail Alliance Variant	Chr3:37526186	Afg2a Intron Rr575488 607 bp proximal	SNP	A/G	G				A	G	A			A	A	A		A	A	G	A
rs3162583 MGI SNP Detail Alliance Variant	Chr3:37526196	Afg2a Intron Rr575488 597 bp proximal	SNP	G													G					G
rs3158661 MGI SNP Detail Alliance Variant	Chr3:37526548	Afg2a Intron Rr575488 245 bp proximal	SNP	A/G	G	G	G	G	A	G	G	A		G	A	A	G	A	G	G	A	G	G
rs3158662 MGI SNP Detail Alliance Variant	Chr3:37526605	Afg2a Intron Rr575488 188 bp proximal	SNP	A/G	G	G	A	G	A	G	A	A	A	G	A	A	G	A	G	G	A	G	A
rs3158663 MGI SNP Detail Alliance Variant	Chr3:37526815	Afg2a Intron Rr575487 within coordinates of Rr575488 1 bp distal	SNP	A/G	A	A	A	A	G	A	A	G	A	A	G	G	A	G	A	A	G	A	A
rs3162585 MGI SNP Detail Alliance Variant	Chr3:37527662	Afg2a Intron Rr575488 848 bp distal	SNP	C/T		T	T					C		T			T					T
rs3162586 MGI SNP Detail Alliance Variant	Chr3:37527678	Afg2a Intron Rr575488 864 bp distal	SNP	C/T	C	C	C	C	T	C	C	T		C	T	T	C	T	C	C	T	C	C
rs3158664 MGI SNP Detail Alliance Variant	Chr3:37527726	Afg2a Intron Rr575488 912 bp distal	SNP	A/G	A	A	A	A	G	A	A	G	A	A	G	G	A	G	A	A	G	A	A
rs3162587 MGI SNP Detail Alliance Variant	Chr3:37527746	Afg2a Intron Rr575488 932 bp distal	SNP	C/T	T	T	T	T	C		T	C	C	T	C	C	T	C	C	T	C	T	T
rs3162588 MGI SNP Detail Alliance Variant	Chr3:37528156	Afg2a Intron Rr575488 1342 bp distal	SNP	C/T			C					T					C					C
rs3158665 MGI SNP Detail Alliance Variant	Chr3:37528262	Afg2a Intron Rr575488 1448 bp distal	SNP	A/C	C	C	C	C	A	C	C	A	C		A	A	C	A	C	C	A	C	C
rs3158666 MGI SNP Detail Alliance Variant	Chr3:37528335	Afg2a Intron Rr575488 1521 bp distal	SNP	A/T	T	T	T	T	A	T	T	A		T	A	A	T	A	T	T	A	T	T
rs3158667 MGI SNP Detail Alliance Variant	Chr3:37528461	Afg2a Intron Rr575488 1647 bp distal	SNP	A/G	G	G	G	G	A	G	G	A			A	A	G	A	G	G	A	G	G
rs3158668 MGI SNP Detail Alliance Variant	Chr3:37528628	Afg2a Intron Rr575488 1814 bp distal	SNP	C/T		T						C					T					T
rs3162589 MGI SNP Detail Alliance Variant	Chr3:37528698	Afg2a Intron Rr575488 1884 bp distal	SNP	C/T		C						T					C					C
SNP ID (GRCm39)	Map Position (GRCm39)	Gene & Category	Variation Type	Allele Summary (all strains)	129S1/SvImJ	129X1/SvJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3<tf>/J	C3H/HeJ	C57BL/6J	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	LG/J	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	SM/J	WSB/EiJ
rs30078131 MGI SNP Detail Alliance Variant	Chr3:37528754	Afg2a Intron Rr575488 1940 bp distal	SNP	A/T			A		A				A	A	A	A		A	A		A		T

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Contributing Projects: Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
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