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Mouse SNP Summary
Symbol
Name
ID 		Rr575505
regulatory region 575505
MGI:8037637

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Showing SNP(s) 1 - 36 of 36

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SNP ID
(GRCm39)		 Map Position
(GRCm39)		 Gene & Category Variation
Type		 Allele
Summary
(all strains)
129S1/SvImJ
129X1/SvJ
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CZECHII/EiJ
DBA/2J
FVB/NJ
JF1/MsJ
KK/HlJ
LG/J
MOLF/EiJ
MSM/Ms
NOD/ShiLtJ
NZW/LacJ
PWD/PhJ
PWK/PhJ
SEA/GnJ
SM/J
SPRET/EiJ
WSB/EiJ
rs30404996
MGI SNP Detail
Alliance Variant		 Chr3:37609717 Afg2a Intron
Afg2a Noncoding-Transcript-Variant
Rr575505 1963 bp proximal
 SNP A/G G A G
rs3158509
MGI SNP Detail
Alliance Variant		 Chr3:37609793 Afg2a Intron
Afg2a Noncoding-Transcript-Variant
Rr575505 1887 bp proximal
 SNP A/G G G G G A
rs3158510
MGI SNP Detail
Alliance Variant		 Chr3:37609796 Afg2a Intron
Afg2a Noncoding-Transcript-Variant
Rr575505 1884 bp proximal
 SNP C/T T T T T C
rs31529230
MGI SNP Detail
Alliance Variant		 Chr3:37609963 Afg2a Intron
Afg2a Noncoding-Transcript-Variant
Rr575505 1717 bp proximal
 SNP A/G A A A A G A G
rs3162477
MGI SNP Detail
Alliance Variant		 Chr3:37610006 Afg2a Intron
Afg2a Noncoding-Transcript-Variant
Rr575505 1674 bp proximal
 SNP G/T G G G G T G G T G T T G T G G T G G
rs30079449
MGI SNP Detail
Alliance Variant		 Chr3:37610328 Afg2a Intron
Afg2a Noncoding-Transcript-Variant
Rr575505 1352 bp proximal
 SNP A/G A A G A A A G A A A A A A A G
rs3158511
MGI SNP Detail
Alliance Variant		 Chr3:37610496 Afg2a Intron
Afg2a Noncoding-Transcript-Variant
Gm12564 within coordinates of
Rr575505 1184 bp proximal
 SNP C/T C C C C T C C T C T T C T C C T C C
rs3162478
MGI SNP Detail
Alliance Variant		 Chr3:37610536 Afg2a Intron
Afg2a Noncoding-Transcript-Variant
Gm12564 within coordinates of
Rr575505 1144 bp proximal
 SNP A/T A A A T A A
rs3158512
MGI SNP Detail
Alliance Variant		 Chr3:37610653 Afg2a Intron
Afg2a Noncoding-Transcript-Variant
Rr575505 1027 bp proximal
 SNP G/T G G G G T G G T G T T G T G G T G G
rs3158513
MGI SNP Detail
Alliance Variant		 Chr3:37610750 Afg2a Intron
Afg2a Noncoding-Transcript-Variant
Rr575504 within coordinates of
Rr575505 930 bp proximal
 SNP A/T A T A T A T A T T A T A A T A T
rs3162479
MGI SNP Detail
Alliance Variant		 Chr3:37611324 Afg2a Intron
Afg2a Noncoding-Transcript-Variant
Rr575504 within coordinates of
Rr575505 356 bp proximal
 SNP A/T T T T A T T A T A A T A T T A T T
rs3158514
MGI SNP Detail
Alliance Variant		 Chr3:37611395 Afg2a Intron
Afg2a Noncoding-Transcript-Variant
Rr575504 within coordinates of
Rr575505 285 bp proximal
 SNP A/G G G G A G G A A G A A G A G G A G G
rs30080652
MGI SNP Detail
Alliance Variant		 Chr3:37611435 Afg2a Intron
Afg2a Noncoding-Transcript-Variant
Rr575504 within coordinates of
Rr575505 245 bp proximal
 SNP C/T T T C T T T C T T T T T T T T C
rs30081765
MGI SNP Detail
Alliance Variant		 Chr3:37611461 Afg2a Intron
Afg2a Noncoding-Transcript-Variant
Rr575504 within coordinates of
Rr575505 219 bp proximal
 SNP C/T T T C T T T C T C T T T T T T T C
rs3162480
MGI SNP Detail
Alliance Variant		 Chr3:37611524 Afg2a Intron
Afg2a Noncoding-Transcript-Variant
Rr575505 156 bp proximal
 SNP C/G C G G C C C G C C G C C G C C C G G
rs30081770
MGI SNP Detail
Alliance Variant		 Chr3:37611647 Afg2a Intron
Afg2a Noncoding-Transcript-Variant
Rr575505 33 bp proximal
 SNP A/G G G G G G G G G G G G G G A G
rs3158515
MGI SNP Detail
Alliance Variant		 Chr3:37611727 Afg2a Intron
Afg2a Noncoding-Transcript-Variant
Rr575505 within coordinates of
 SNP A/T T T T T A T T A A T A A T A T T A T T
rs3158516
MGI SNP Detail
Alliance Variant		 Chr3:37612359 Afg2a Intron
Afg2a Noncoding-Transcript-Variant
Rr575505 within coordinates of
 SNP A/G G G G A G G G
rs3158517
MGI SNP Detail
Alliance Variant		 Chr3:37612394 Afg2a Intron
Afg2a Noncoding-Transcript-Variant
Rr575505 within coordinates of
 SNP C/T C C C C T C T C T C T C T C C
rs30082657
MGI SNP Detail
Alliance Variant		 Chr3:37612506 Afg2a Intron
Afg2a Noncoding-Transcript-Variant
Rr575505 within coordinates of
 SNP A/G G G G G G G A G G G G G G G G
rs3158518
MGI SNP Detail
Alliance Variant		 Chr3:37612568 Afg2a Intron
Afg2a Noncoding-Transcript-Variant
Rr575505 within coordinates of
 SNP A/G G G G G A G G A A G A A G A G G A G G
rs3162481
MGI SNP Detail
Alliance Variant		 Chr3:37612743 Afg2a Intron
Afg2a Noncoding-Transcript-Variant
Rr575505 within coordinates of
 SNP A/G A A A A G A A G G A G G A G G A A G A A
rs3158519
MGI SNP Detail
Alliance Variant		 Chr3:37612789 Afg2a Intron
Afg2a Noncoding-Transcript-Variant
Rr575505 within coordinates of
 SNP C/T T T T T C T T C T T C C T C C T T C T T
rs3158520
MGI SNP Detail
Alliance Variant		 Chr3:37612809 Afg2a Intron
Afg2a Noncoding-Transcript-Variant
Rr575505 within coordinates of
 SNP C/T T T T T C T T C C T C C T C C T T C T T
rs3158521
MGI SNP Detail
Alliance Variant		 Chr3:37612852 Afg2a Intron
Afg2a Noncoding-Transcript-Variant
Rr575505 within coordinates of
 SNP C/T C C C C T C C T C C T T C T T C C T C C
SNP ID
(GRCm39)		 Map Position
(GRCm39)		 Gene & Category Variation
Type		 Allele
Summary
(all strains)
129S1/SvImJ
129X1/SvJ
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CZECHII/EiJ
DBA/2J
FVB/NJ
JF1/MsJ
KK/HlJ
LG/J
MOLF/EiJ
MSM/Ms
NOD/ShiLtJ
NZW/LacJ
PWD/PhJ
PWK/PhJ
SEA/GnJ
SM/J
SPRET/EiJ
WSB/EiJ
rs30083920
MGI SNP Detail
Alliance Variant		 Chr3:37613214 Afg2a Intron
Afg2a Noncoding-Transcript-Variant
Rr575505 within coordinates of
 SNP C/T T T T T T T T C C T C T T C T T
rs3162482
MGI SNP Detail
Alliance Variant		 Chr3:37613976 Afg2a Intron
Afg2a Noncoding-Transcript-Variant
Rr575505 710 bp distal
Rr575506 within coordinates of
 SNP C/T T T C T T T
rs3158522
MGI SNP Detail
Alliance Variant		 Chr3:37614294 Afg2a Intron
Afg2a Noncoding-Transcript-Variant
Rr575505 1028 bp distal
Rr575506 within coordinates of
 SNP A/C C A C C C
rs251607876
MGI SNP Detail
Alliance Variant		 Chr3:37614396 Afg2a Intron
Afg2a Noncoding-Transcript-Variant
Rr575505 1130 bp distal
Rr575506 within coordinates of
 SNP A/T A T
rs387037089
MGI SNP Detail
Alliance Variant		 Chr3:37614397 Afg2a Intron
Afg2a Noncoding-Transcript-Variant
Rr575505 1131 bp distal
Rr575506 within coordinates of
 SNP C/G C C C C C C C C C C C G C C C C C C
rs217960432
MGI SNP Detail
Alliance Variant		 Chr3:37614399 Afg2a Intron
Afg2a Noncoding-Transcript-Variant
Rr575505 1133 bp distal
Rr575506 within coordinates of
 SNP A/C C A
rs30083923
MGI SNP Detail
Alliance Variant		 Chr3:37614570 Afg2a Intron
Afg2a Noncoding-Transcript-Variant
Rr575505 1304 bp distal
 SNP G/T T G T T T G T T T T T T T T G
rs30084896
MGI SNP Detail
Alliance Variant		 Chr3:37614717 Afg2a Intron
Afg2a Noncoding-Transcript-Variant
Rr575505 1451 bp distal
 SNP A/G A A A A A A G A A A A A A A A
rs3158523
MGI SNP Detail
Alliance Variant		 Chr3:37614740 Afg2a Intron
Afg2a Noncoding-Transcript-Variant
Rr575505 1474 bp distal
 SNP G/T T T T T G T T G T T G G T G T T G T T
rs3162483
MGI SNP Detail
Alliance Variant		 Chr3:37615081 Afg2a Intron
Afg2a Noncoding-Transcript-Variant
Rr575505 1815 bp distal
 SNP A/G A A A G A A G A G G A G A A G A A
rs3158524
MGI SNP Detail
Alliance Variant		 Chr3:37615135 Afg2a Intron
Afg2a Noncoding-Transcript-Variant
Rr575505 1869 bp distal
 SNP G/T G G T G T G T T G T T G T G G T G T
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Showing SNP(s) 1 - 36 of 36
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Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
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Send questions and comments to User Support. 		last database update
03/25/2025
MGI 6.24 		The Jackson Laboratory