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Mouse SNP Summary
Symbol
Name
ID 		Rr575506
regulatory region 575506
MGI:8037638

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Showing SNP(s) 1 - 34 of 34

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SNP ID
(GRCm39)		 Map Position
(GRCm39)		 Gene & Category Variation
Type		 Allele
Summary
(all strains)
129S1/SvImJ
129X1/SvJ
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CZECHII/EiJ
DBA/2J
FVB/NJ
JF1/MsJ
KK/HlJ
LG/J
MOLF/EiJ
MSM/Ms
NOD/ShiLtJ
NZW/LacJ
PWD/PhJ
PWK/PhJ
SEA/GnJ
SM/J
SPRET/EiJ
WSB/EiJ
rs30080652
MGI SNP Detail
Alliance Variant		 Chr3:37611435 Afg2a Intron
Afg2a Noncoding-Transcript-Variant
Rr575504 within coordinates of
Rr575506 1965 bp proximal
 SNP C/T T T C T T T C T T T T T T T T C
rs30081765
MGI SNP Detail
Alliance Variant		 Chr3:37611461 Afg2a Intron
Afg2a Noncoding-Transcript-Variant
Rr575504 within coordinates of
Rr575506 1939 bp proximal
 SNP C/T T T C T T T C T C T T T T T T T C
rs3162480
MGI SNP Detail
Alliance Variant		 Chr3:37611524 Afg2a Intron
Afg2a Noncoding-Transcript-Variant
Rr575506 1876 bp proximal
 SNP C/G C G G C C C G C C G C C G C C C G G
rs30081770
MGI SNP Detail
Alliance Variant		 Chr3:37611647 Afg2a Intron
Afg2a Noncoding-Transcript-Variant
Rr575506 1753 bp proximal
 SNP A/G G G G G G G G G G G G G G A G
rs3158515
MGI SNP Detail
Alliance Variant		 Chr3:37611727 Afg2a Intron
Afg2a Noncoding-Transcript-Variant
Rr575505 within coordinates of
Rr575506 1673 bp proximal
 SNP A/T T T T T A T T A A T A A T A T T A T T
rs3158516
MGI SNP Detail
Alliance Variant		 Chr3:37612359 Afg2a Intron
Afg2a Noncoding-Transcript-Variant
Rr575505 within coordinates of
Rr575506 1041 bp proximal
 SNP A/G G G G A G G G
rs3158517
MGI SNP Detail
Alliance Variant		 Chr3:37612394 Afg2a Intron
Afg2a Noncoding-Transcript-Variant
Rr575505 within coordinates of
Rr575506 1006 bp proximal
 SNP C/T C C C C T C T C T C T C T C C
rs30082657
MGI SNP Detail
Alliance Variant		 Chr3:37612506 Afg2a Intron
Afg2a Noncoding-Transcript-Variant
Rr575505 within coordinates of
Rr575506 894 bp proximal
 SNP A/G G G G G G G A G G G G G G G G
rs3158518
MGI SNP Detail
Alliance Variant		 Chr3:37612568 Afg2a Intron
Afg2a Noncoding-Transcript-Variant
Rr575505 within coordinates of
Rr575506 832 bp proximal
 SNP A/G G G G G A G G A A G A A G A G G A G G
rs3162481
MGI SNP Detail
Alliance Variant		 Chr3:37612743 Afg2a Intron
Afg2a Noncoding-Transcript-Variant
Rr575505 within coordinates of
Rr575506 657 bp proximal
 SNP A/G A A A A G A A G G A G G A G G A A G A A
rs3158519
MGI SNP Detail
Alliance Variant		 Chr3:37612789 Afg2a Intron
Afg2a Noncoding-Transcript-Variant
Rr575505 within coordinates of
Rr575506 611 bp proximal
 SNP C/T T T T T C T T C T T C C T C C T T C T T
rs3158520
MGI SNP Detail
Alliance Variant		 Chr3:37612809 Afg2a Intron
Afg2a Noncoding-Transcript-Variant
Rr575505 within coordinates of
Rr575506 591 bp proximal
 SNP C/T T T T T C T T C C T C C T C C T T C T T
rs3158521
MGI SNP Detail
Alliance Variant		 Chr3:37612852 Afg2a Intron
Afg2a Noncoding-Transcript-Variant
Rr575505 within coordinates of
Rr575506 548 bp proximal
 SNP C/T C C C C T C C T C C T T C T T C C T C C
rs30083920
MGI SNP Detail
Alliance Variant		 Chr3:37613214 Afg2a Intron
Afg2a Noncoding-Transcript-Variant
Rr575505 within coordinates of
Rr575506 186 bp proximal
 SNP C/T T T T T T T T C C T C T T C T T
rs3162482
MGI SNP Detail
Alliance Variant		 Chr3:37613976 Afg2a Intron
Afg2a Noncoding-Transcript-Variant
Rr575506 within coordinates of
 SNP C/T T T C T T T
rs3158522
MGI SNP Detail
Alliance Variant		 Chr3:37614294 Afg2a Intron
Afg2a Noncoding-Transcript-Variant
Rr575506 within coordinates of
 SNP A/C C A C C C
rs251607876
MGI SNP Detail
Alliance Variant		 Chr3:37614396 Afg2a Intron
Afg2a Noncoding-Transcript-Variant
Rr575506 within coordinates of
 SNP A/T A T
rs387037089
MGI SNP Detail
Alliance Variant		 Chr3:37614397 Afg2a Intron
Afg2a Noncoding-Transcript-Variant
Rr575506 within coordinates of
 SNP C/G C C C C C C C C C C C G C C C C C C
rs217960432
MGI SNP Detail
Alliance Variant		 Chr3:37614399 Afg2a Intron
Afg2a Noncoding-Transcript-Variant
Rr575506 within coordinates of
 SNP A/C C A
rs30083923
MGI SNP Detail
Alliance Variant		 Chr3:37614570 Afg2a Intron
Afg2a Noncoding-Transcript-Variant
Rr575506 159 bp distal
 SNP G/T T G T T T G T T T T T T T T G
rs30084896
MGI SNP Detail
Alliance Variant		 Chr3:37614717 Afg2a Intron
Afg2a Noncoding-Transcript-Variant
Rr575506 306 bp distal
 SNP A/G A A A A A A G A A A A A A A A
rs3158523
MGI SNP Detail
Alliance Variant		 Chr3:37614740 Afg2a Intron
Afg2a Noncoding-Transcript-Variant
Rr575506 329 bp distal
 SNP G/T T T T T G T T G T T G G T G T T G T T
rs3162483
MGI SNP Detail
Alliance Variant		 Chr3:37615081 Afg2a Intron
Afg2a Noncoding-Transcript-Variant
Rr575506 670 bp distal
 SNP A/G A A A G A A G A G G A G A A G A A
rs3158524
MGI SNP Detail
Alliance Variant		 Chr3:37615135 Afg2a Intron
Afg2a Noncoding-Transcript-Variant
Rr575506 724 bp distal
 SNP G/T G G T G T G T T G T T G T G G T G T
rs30086105
MGI SNP Detail
Alliance Variant		 Chr3:37615338 Afg2a Intron
Afg2a Noncoding-Transcript-Variant
Rr575506 927 bp distal
 SNP C/T C T T T C T T T T T C
SNP ID
(GRCm39)		 Map Position
(GRCm39)		 Gene & Category Variation
Type		 Allele
Summary
(all strains)
129S1/SvImJ
129X1/SvJ
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CZECHII/EiJ
DBA/2J
FVB/NJ
JF1/MsJ
KK/HlJ
LG/J
MOLF/EiJ
MSM/Ms
NOD/ShiLtJ
NZW/LacJ
PWD/PhJ
PWK/PhJ
SEA/GnJ
SM/J
SPRET/EiJ
WSB/EiJ
rs3162484
MGI SNP Detail
Alliance Variant		 Chr3:37615360 Afg2a Intron
Afg2a Noncoding-Transcript-Variant
Rr575506 949 bp distal
 SNP C/T C C C T C T T C C T T C T C C T C C
rs3162485
MGI SNP Detail
Alliance Variant		 Chr3:37615383 Afg2a Intron
Afg2a Noncoding-Transcript-Variant
Rr575506 972 bp distal
 SNP A/T T T T A T A A A T A A T A T T A T
rs30079236
MGI SNP Detail
Alliance Variant		 Chr3:37615384 Afg2a Intron
Afg2a Noncoding-Transcript-Variant
Rr575506 973 bp distal
 SNP C/T C C C C C T C C C C C C C
rs31190234
MGI SNP Detail
Alliance Variant		 Chr3:37615650 Afg2a Intron
Afg2a Noncoding-Transcript-Variant
Rr575506 1239 bp distal
 SNP C/T T T C C C
rs30079239
MGI SNP Detail
Alliance Variant		 Chr3:37615736 Afg2a Intron
Afg2a Noncoding-Transcript-Variant
Rr575506 1325 bp distal
 SNP A/T T T T T T A T T T T T T T A
rs256391217
MGI SNP Detail
Alliance Variant		 Chr3:37615798 Afg2a Intron
Afg2a Noncoding-Transcript-Variant
Rr575506 1387 bp distal
 SNP A/T T A
rs30079242
MGI SNP Detail
Alliance Variant		 Chr3:37616084 Afg2a Intron
Afg2a Noncoding-Transcript-Variant
Rr575506 1673 bp distal
 SNP A/T T T T T T A T T T T T T T
rs3158526
MGI SNP Detail
Alliance Variant		 Chr3:37616096 Afg2a Intron
Afg2a Noncoding-Transcript-Variant
Rr575506 1685 bp distal
 SNP A/G A A A A G G A G G A G A A G A
rs3158527
MGI SNP Detail
Alliance Variant		 Chr3:37616393 Afg2a Intron
Afg2a Noncoding-Transcript-Variant
Rr575506 1982 bp distal
 SNP A/G A G A A A
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Showing SNP(s) 1 - 34 of 34
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Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
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Send questions and comments to User Support. 		last database update
03/18/2025
MGI 6.24 		The Jackson Laboratory