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Mouse SNP Summary
Symbol
Name
ID 		Rr575656
regulatory region 575656
MGI:8037788

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SNP ID
(GRCm39)		 Map Position
(GRCm39)		 Gene & Category Variation
Type		 Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
129X1/SvJ
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PL/J
PWD/PhJ
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs582768586
MGI SNP Detail		 Chr3:38341301 Rr575656 1957 bp proximal
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs49707587
MGI SNP Detail		 Chr3:38341312 Rr575656 1946 bp proximal
 SNP G G G G G
rs46399141
MGI SNP Detail		 Chr3:38341324 Rr575656 1934 bp proximal
 SNP T T T T T
rs246060108
MGI SNP Detail		 Chr3:38341341 Rr575656 1917 bp proximal
 SNP G/T G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G T G G G G G G G G G G G G
rs51243890
MGI SNP Detail		 Chr3:38341356 Rr575656 1902 bp proximal
 SNP A/G A A A A G A G A G G A G A A A
rs240474119
MGI SNP Detail		 Chr3:38341426 Rr575656 1832 bp proximal
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G G G G G G G G G
rs259411006
MGI SNP Detail		 Chr3:38341450 Rr575656 1808 bp proximal
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C C C C C C C C C
rs217824567
MGI SNP Detail		 Chr3:38341452 Rr575656 1806 bp proximal
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs49556154
MGI SNP Detail		 Chr3:38341475 Rr575656 1783 bp proximal
 SNP C C C C C C
rs249540278
MGI SNP Detail		 Chr3:38341489 Rr575656 1769 bp proximal
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G G G G G G G G G
rs220267798
MGI SNP Detail		 Chr3:38341622 Rr575656 1636 bp proximal
 SNP A/C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C A C C C C
rs231221684
MGI SNP Detail		 Chr3:38341638 Rr575656 1620 bp proximal
 SNP A/C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C A C C C C
rs253332259
MGI SNP Detail		 Chr3:38341705 Rr575656 1553 bp proximal
 SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A A A A A A A A A
rs47891825
MGI SNP Detail		 Chr3:38341771 Rr575656 1487 bp proximal
 SNP C C C C C C
rs49134998
MGI SNP Detail		 Chr3:38341793 Rr575656 1465 bp proximal
 SNP A A A A A
rs265875379
MGI SNP Detail		 Chr3:38341816 Rr575656 1442 bp proximal
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C C C C C C C C C
rs47968470
MGI SNP Detail		 Chr3:38341828 Rr575656 1430 bp proximal
 SNP C/T T T C T T C C T C T T
rs236150799
MGI SNP Detail		 Chr3:38341874 Rr575656 1384 bp proximal
 SNP G/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T G T T T T
rs49967582
MGI SNP Detail		 Chr3:38341912 Rr575656 1346 bp proximal
 SNP G G G G
rs48047431
MGI SNP Detail		 Chr3:38341916 Rr575656 1342 bp proximal
 SNP A/G A A G A A G G A A
rs48451158
MGI SNP Detail		 Chr3:38341935 Rr575656 1323 bp proximal
 SNP A/G A G A A G G A G A
rs257298065
MGI SNP Detail		 Chr3:38341956 Rr575656 1302 bp proximal
 SNP G/T G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G T G G G G G G G G G G G G
rs48437521
MGI SNP Detail		 Chr3:38341972 Rr575656 1286 bp proximal
 SNP A/G G G G G G A G G G G G
rs254090874
MGI SNP Detail		 Chr3:38342060 Rr575656 1198 bp proximal
 SNP A/T A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A T A A A A A A A A A A A A
rs50165174
MGI SNP Detail		 Chr3:38342067 Rr575656 1191 bp proximal
 SNP C C C C
SNP ID
(GRCm39)		 Map Position
(GRCm39)		 Gene & Category Variation
Type		 Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
129X1/SvJ
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PL/J
PWD/PhJ
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs213470793
MGI SNP Detail		 Chr3:38342078 Rr575656 1180 bp proximal
 SNP A/G G G G G G G G G G G G G G G G G G G G A G G G G G G G G G G G G G G G G G G G G A G G G G G G G A G G G G
rs48006098
MGI SNP Detail		 Chr3:38342107 Rr575656 1151 bp proximal
 SNP A A A A A
rs243429541
MGI SNP Detail		 Chr3:38342111 Rr575656 1147 bp proximal
 SNP C/T C C C C C C C C C C C C C C C C C C C T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C
rs49969986
MGI SNP Detail		 Chr3:38342129 Rr575656 1129 bp proximal
 SNP G G G G
rs45875674
MGI SNP Detail		 Chr3:38342134 Rr575656 1124 bp proximal
 SNP C C C C
rs253612702
MGI SNP Detail		 Chr3:38342148 Rr575656 1110 bp proximal
 SNP G/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T G T T T T T T T T T T T T
rs223890214
MGI SNP Detail		 Chr3:38342150 Rr575656 1108 bp proximal
 SNP C/T C C C C C C C C C C C C C C C C C C C T C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs242721536
MGI SNP Detail		 Chr3:38342183 Rr575656 1075 bp proximal
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs259989452
MGI SNP Detail		 Chr3:38342194 Rr575656 1064 bp proximal
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C C C C C C C C C
rs220806334
MGI SNP Detail		 Chr3:38342197 Rr575656 1061 bp proximal
 SNP A/C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C A C C C C
rs48461816
MGI SNP Detail		 Chr3:38342207 Rr575656 1051 bp proximal
 SNP A A A A
rs50554713
MGI SNP Detail		 Chr3:38342224 Rr575656 1034 bp proximal
 SNP G G G G G
rs46639662
MGI SNP Detail		 Chr3:38342279 Rr575656 979 bp proximal
 SNP A/G G G G A G G A A A A G A
rs218992044
MGI SNP Detail		 Chr3:38342296 Rr575656 962 bp proximal
 SNP A A A
rs585562847
MGI SNP Detail		 Chr3:38342297 Rr575656 961 bp proximal
 SNP C/G C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C G C C C C
rs50532623
MGI SNP Detail		 Chr3:38342344 Rr575656 914 bp proximal
 SNP C/T C T C C
rs265616062
MGI SNP Detail		 Chr3:38342435 Rr575656 823 bp proximal
 SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T T T T T T T T T
rs233899552
MGI SNP Detail		 Chr3:38342467 Rr575656 791 bp proximal
 SNP C/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G C G G G G
rs30651766
MGI SNP Detail		 Chr3:38342558 Rr575656 700 bp proximal
 SNP A/G G G G G A G G A G A A G G G G G
rs262013746
MGI SNP Detail		 Chr3:38342581 Rr575656 677 bp proximal
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G G G G G G G G G
rs30744190
MGI SNP Detail		 Chr3:38342582 Rr575656 676 bp proximal
 SNP A/G A G A A
rs31138059
MGI SNP Detail		 Chr3:38342591 Rr575656 667 bp proximal
 SNP C/T T T C T T
rs214260395
MGI SNP Detail		 Chr3:38342595 Rr575656 663 bp proximal
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs225677796
MGI SNP Detail		 Chr3:38342598 Rr575656 660 bp proximal
 SNP A/C A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A C A A A A
rs45935249
MGI SNP Detail		 Chr3:38342639 Rr575656 619 bp proximal
 SNP C/G G G G G G G C G G G G G G
SNP ID
(GRCm39)		 Map Position
(GRCm39)		 Gene & Category Variation
Type		 Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
129X1/SvJ
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PL/J
PWD/PhJ
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs48248287
MGI SNP Detail		 Chr3:38342675 Rr575656 583 bp proximal
 SNP G/T G G G G G G T G G G G G G G
rs50807032
MGI SNP Detail		 Chr3:38342718 Rr575656 540 bp proximal
 SNP A A A A A
rs212570043
MGI SNP Detail		 Chr3:38342815 Rr575656 443 bp proximal
 SNP G/T G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G T G G G G
rs578847861
MGI SNP Detail		 Chr3:38342860 Rr575656 398 bp proximal
 SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs582494394
MGI SNP Detail		 Chr3:38342861 Rr575656 397 bp proximal
 SNP C/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G C G G G G
rs585818481
MGI SNP Detail		 Chr3:38342870 Rr575656 388 bp proximal
 SNP A/G A A A A A A A A A A A A A A A A A A A G A A A A A A A A A A A A A A A A A A A A G A A A A A A A A A A A
rs31649536
MGI SNP Detail		 Chr3:38342927 Rr575656 331 bp proximal
 SNP A/C C A C C
rs250306834
MGI SNP Detail		 Chr3:38342938 Rr575656 320 bp proximal
 SNP A/G G G G G G G G G G G G G G G G G G G G A G G G G G G G G G G G G G G G G G G G G A G G G G G G G G G G G G
rs219603550
MGI SNP Detail		 Chr3:38342943 Rr575656 315 bp proximal
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G G G G G G G G G
rs240316026
MGI SNP Detail		 Chr3:38342969 Rr575656 289 bp proximal
 SNP A/G A A A A A A A A A A A A A A A A A A G A A A A A A A A A A A A A A A A A A A A G A A A A A A A A A A A A
rs49224014
MGI SNP Detail		 Chr3:38342990 Rr575656 268 bp proximal
 SNP C/T C C C C C C T C C C C C C
rs579805518
MGI SNP Detail		 Chr3:38343067 Rr575656 191 bp proximal
 SNP A/C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C A C C C C C C C C C C C C
rs227639230
MGI SNP Detail		 Chr3:38343070 Rr575656 188 bp proximal
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs51308915
MGI SNP Detail		 Chr3:38343109 Rr575656 149 bp proximal
 SNP A/G G G G A G A A G A G G G
rs48218442
MGI SNP Detail		 Chr3:38343148 Rr575656 110 bp proximal
 SNP C/T C C C C C C T T C C C C
rs46236009
MGI SNP Detail		 Chr3:38343197 Rr575656 61 bp proximal
 SNP A/T T A T T
rs582371498
MGI SNP Detail		 Chr3:38343248 Rr575656 10 bp proximal
 SNP C/T C C C C C C C C C C C C C C C C C C C T C C C C C C C C C C C C C C C C C T C C C C C C C C C C
rs585424841
MGI SNP Detail		 Chr3:38343276 Rr575656 within coordinates of
 SNP C/T C C C C C C C C C C C C C C C C C C T C C C C C C C C C C C C C C C C C C C C C C C C C C C C
rs239881962
MGI SNP Detail		 Chr3:38343298 Rr575656 within coordinates of
 SNP C/T T T C C C T C T C C C C C C C C T C C C T C T T T C T C C T T
rs257758197
MGI SNP Detail		 Chr3:38343300 Rr575656 within coordinates of
 SNP C/T C T T T C T C T T T T T T T T C T T T C T C C C T C T C C
rs225587722
MGI SNP Detail		 Chr3:38343301 Rr575656 within coordinates of
 SNP G/T T G G G T G T G G G G G G G G T G G G T G T T T G T G G T
rs258101538
MGI SNP Detail		 Chr3:38343312 Rr575656 within coordinates of
 SNP A/G A G G G A G A G G G G G G G A A G G G G A A A A G A A A
rs215660940
MGI SNP Detail		 Chr3:38343317 Rr575656 within coordinates of
 SNP A/G A A A A G A A A A A A A A G A A A A G G A A G
rs253918392
MGI SNP Detail		 Chr3:38343330 Rr575656 within coordinates of
 SNP G G G G G G G G G G G G G G G G G G G G G G G G G G
rs229697056
MGI SNP Detail		 Chr3:38343352 Rr575656 within coordinates of
 SNP G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G
SNP ID
(GRCm39)		 Map Position
(GRCm39)		 Gene & Category Variation
Type		 Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
129X1/SvJ
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PL/J
PWD/PhJ
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs51610138
MGI SNP Detail		 Chr3:38343374 Rr575656 within coordinates of
 SNP A/G A G A G A G A A
rs227560734
MGI SNP Detail		 Chr3:38343378 Rr575656 within coordinates of
 SNP C C C
rs233788669
MGI SNP Detail		 Chr3:38343392 Rr575656 within coordinates of
 SNP G/T G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G T G G G G
rs263064531
MGI SNP Detail		 Chr3:38343402 Rr575656 within coordinates of
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs227071414
MGI SNP Detail		 Chr3:38343429 Rr575656 within coordinates of
 SNP A/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T A T T T T
rs244903144
MGI SNP Detail		 Chr3:38343510 Rr575656 within coordinates of
 SNP G G G
rs265658322
MGI SNP Detail		 Chr3:38343519 Rr575656 within coordinates of
 SNP A A A
rs108741694
MGI SNP Detail		 Chr3:38343559 Rr575656 36 bp distal
 SNP T T T T T
rs46617190
MGI SNP Detail		 Chr3:38343560 Rr575656 37 bp distal
 SNP A/G G G A G G G
rs583912358
MGI SNP Detail		 Chr3:38343566 Rr575656 43 bp distal
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs108772331
MGI SNP Detail		 Chr3:38343569 Rr575656 46 bp distal
 SNP C/T T T T C T
rs51232361
MGI SNP Detail		 Chr3:38343702 Rr575656 179 bp distal
 SNP C/T C C C T C
rs46397816
MGI SNP Detail		 Chr3:38343706 Rr575656 183 bp distal
 SNP A/T A A A T A
rs587435844
MGI SNP Detail		 Chr3:38343712 Rr575656 189 bp distal
 SNP A/T A T T T A T T T T T T T T T T T T T T A T A T A T
rs265464263
MGI SNP Detail		 Chr3:38343752 Rr575656 229 bp distal
 SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs233773739
MGI SNP Detail		 Chr3:38343771 Rr575656 248 bp distal
 SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs259209026
MGI SNP Detail		 Chr3:38343772 Rr575656 249 bp distal
 SNP A/C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C A C C C C
rs254602474
MGI SNP Detail		 Chr3:38343786 Rr575656 263 bp distal
 SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs52582894
MGI SNP Detail		 Chr3:38343787 Rr575656 264 bp distal
 SNP A A A
rs52303279
MGI SNP Detail		 Chr3:38343824 Rr575656 301 bp distal
 SNP A A A A A A
rs52585519
MGI SNP Detail		 Chr3:38343828 Rr575656 305 bp distal
 SNP A A A A A A
rs240684594
MGI SNP Detail		 Chr3:38343835 Rr575656 312 bp distal
 SNP A/C A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A C A A A A
rs52191499
MGI SNP Detail		 Chr3:38343849 Rr575656 326 bp distal
 SNP T T T T T T
rs52175734
MGI SNP Detail		 Chr3:38343867 Rr575656 344 bp distal
 SNP T T T T T T
rs239818807
MGI SNP Detail		 Chr3:38343918 Rr575656 395 bp distal
 SNP A/C A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A C A A A A
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Showing SNP(s) 1 - 100 of 170
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
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Send questions and comments to User Support. 		last database update
03/18/2025
MGI 6.24 		The Jackson Laboratory
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