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Mouse SNP Summary
Symbol
Name
ID 		Rr575724
regulatory region 575724
MGI:8037856

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Showing SNP(s) 1 - 40 of 40

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SNP ID
(GRCm39)		 Map Position
(GRCm39)		 Gene & Category Variation
Type		 Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
129X1/SvJ
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PL/J
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs253669044
MGI SNP Detail
Alliance Variant		 Chr3:38940276 C230034O21Rik within coordinates of
Cpgi13105 within coordinates of
Fat4 mRNA-UTR
Gm56780 within coordinates of
Rr575724 1905 bp proximal
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C
rs231520162
MGI SNP Detail
Alliance Variant		 Chr3:38940338 C230034O21Rik within coordinates of
Cpgi13105 within coordinates of
Fat4 mRNA-UTR
Gm56780 within coordinates of
Rr575724 1843 bp proximal
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs50761213
MGI SNP Detail
Alliance Variant		 Chr3:38940359 C230034O21Rik within coordinates of
Cpgi13105 within coordinates of
Fat4 mRNA-UTR
Gm56780 within coordinates of
Rr575724 1822 bp proximal
 SNP C C C C C
rs217616628
MGI SNP Detail
Alliance Variant		 Chr3:38940383 C230034O21Rik within coordinates of
Cpgi13105 within coordinates of
Fat4 mRNA-UTR
Gm56780 within coordinates of
Rr575724 1798 bp proximal
 SNP C/G C C C C C C C C C C C C C C C C C C C G C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C
rs238238943
MGI SNP Detail
Alliance Variant		 Chr3:38940482 C230034O21Rik within coordinates of
Cpgi13105 within coordinates of
Fat4 mRNA-UTR
Gm56780 within coordinates of
Rr575724 1699 bp proximal
 SNP G/T G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G T
rs260329263
MGI SNP Detail
Alliance Variant		 Chr3:38940536 C230034O21Rik within coordinates of
Cpgi13105 within coordinates of
Fat4 mRNA-UTR
Gm56780 within coordinates of
Rr575724 1645 bp proximal
 SNP A/T A A A A A A A A A A A A A A A A A T A A
rs216752121
MGI SNP Detail
Alliance Variant		 Chr3:38940538 C230034O21Rik within coordinates of
Cpgi13105 within coordinates of
Fat4 mRNA-UTR
Gm56780 within coordinates of
Rr575724 1643 bp proximal
 SNP C/T T T T T T T T T T T T T T T T T T T T C T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T
rs230615542
MGI SNP Detail
Alliance Variant		 Chr3:38940544 C230034O21Rik within coordinates of
Cpgi13105 within coordinates of
Fat4 mRNA-UTR
Gm56780 within coordinates of
Rr575724 1637 bp proximal
 SNP A/C A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A C A A A A
rs47536161
MGI SNP Detail
Alliance Variant		 Chr3:38940577 C230034O21Rik within coordinates of
Cpgi13105 within coordinates of
Fat4 mRNA-UTR
Gm56780 within coordinates of
Rr575724 1604 bp proximal
 SNP G G G G G G
rs220411625
MGI SNP Detail
Alliance Variant		 Chr3:38940660 C230034O21Rik within coordinates of
Cpgi13105 within coordinates of
Fat4 mRNA-UTR
Rr575721 within coordinates of
Rr575724 1521 bp proximal
 SNP C/G C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C G C C C C
rs48008904
MGI SNP Detail
Alliance Variant		 Chr3:38940693 C230034O21Rik within coordinates of
Cpgi13105 within coordinates of
Fat4 mRNA-UTR
Rr575721 within coordinates of
Rr575724 1488 bp proximal
 SNP T T T T T T
rs256936126
MGI SNP Detail
Alliance Variant		 Chr3:38940815 C230034O21Rik within coordinates of
Cpgi13105 within coordinates of
Fat4 Intron
Rr575721 within coordinates of
Rr575724 1366 bp proximal
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs51020271
MGI SNP Detail
Alliance Variant		 Chr3:38940859 C230034O21Rik within coordinates of
Cpgi13105 within coordinates of
Fat4 Intron
Rr575721 within coordinates of
Rr575724 1322 bp proximal
 SNP G G G
rs49669576
MGI SNP Detail
Alliance Variant		 Chr3:38940928 C230034O21Rik within coordinates of
Cpgi13105 within coordinates of
Fat4 Intron
Rr575721 within coordinates of
Rr575724 1253 bp proximal
 SNP C C C C C
rs259795365
MGI SNP Detail
Alliance Variant		 Chr3:38940941 C230034O21Rik within coordinates of
Cpgi13105 within coordinates of
Fat4 Intron
Rr575721 within coordinates of
Rr575724 1240 bp proximal
 SNP C/G C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C G C C C C
rs221757273
MGI SNP Detail
Alliance Variant		 Chr3:38940954 C230034O21Rik within coordinates of
Cpgi13105 within coordinates of
Fat4 Intron
Rr575721 within coordinates of
Rr575724 1227 bp proximal
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs48711750
MGI SNP Detail
Alliance Variant		 Chr3:38940955 C230034O21Rik within coordinates of
Cpgi13105 within coordinates of
Fat4 Intron
Rr575721 within coordinates of
Rr575724 1226 bp proximal
 SNP T T T T T
rs253725927
MGI SNP Detail
Alliance Variant		 Chr3:38940973 C230034O21Rik within coordinates of
Cpgi13105 within coordinates of
Fat4 Intron
Rr575721 within coordinates of
Rr575724 1208 bp proximal
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs230680966
MGI SNP Detail
Alliance Variant		 Chr3:38941001 C230034O21Rik within coordinates of
Cpgi13105 within coordinates of
Fat4 Intron
Rr575721 within coordinates of
Rr575724 1180 bp proximal
 SNP C/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G C G G G G
rs246321869
MGI SNP Detail
Alliance Variant		 Chr3:38941234 Cpgi13105 within coordinates of
Fat4 Coding-Synonymous
Rr575724 947 bp proximal
 SNP G/T G G G G G G G G G G G G G G G G G G G T G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G
rs30858137
MGI SNP Detail
Alliance Variant		 Chr3:38941327 Cpgi13105 within coordinates of
Fat4 Coding-Synonymous
Rr575724 854 bp proximal
 SNP G/T G G T G T G
rs30015263
MGI SNP Detail
Alliance Variant		 Chr3:38941369 Cpgi13105 within coordinates of
Fat4 Coding-Synonymous
Rr575724 812 bp proximal
 SNP C/G G C C C C G
rs31338926
MGI SNP Detail
Alliance Variant		 Chr3:38941623 Cpgi13105 within coordinates of
Fat4 Coding-NonSynonymous
Rr575724 558 bp proximal
 SNP A/G G G A G G
rs216979755
MGI SNP Detail
Alliance Variant		 Chr3:38941666 Cpgi13105 within coordinates of
Fat4 Coding-Synonymous
Rr575724 515 bp proximal
 SNP C/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G C G G G G
rs30054444
MGI SNP Detail
Alliance Variant		 Chr3:38942126 Cpgi13105 within coordinates of
Fat4 Coding-NonSynonymous
Rr575724 55 bp proximal
 SNP C/T C C T C C C
SNP ID
(GRCm39)		 Map Position
(GRCm39)		 Gene & Category Variation
Type		 Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
129X1/SvJ
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PL/J
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs243569695
MGI SNP Detail
Alliance Variant		 Chr3:38942155 Cpgi13105 within coordinates of
Fat4 Coding-Synonymous
Rr575724 26 bp proximal
 SNP C/T C C C C C C C C C C C C C C C C C C C T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C
rs31650614
MGI SNP Detail
Alliance Variant		 Chr3:38942500 Cpgi13105 within coordinates of
Fat4 Coding-Synonymous
Rr575724 298 bp distal
Rr575725 within coordinates of
 SNP C/T C C T C C C
rs236354608
MGI SNP Detail
Alliance Variant		 Chr3:38942848 Fat4 Coding-Synonymous
Rr575724 646 bp distal
Rr575725 within coordinates of
 SNP C/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G C G G G G
rs261965028
MGI SNP Detail
Alliance Variant		 Chr3:38942861 Fat4 Coding-NonSynonymous
Rr575724 659 bp distal
Rr575725 within coordinates of
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs30406309
MGI SNP Detail
Alliance Variant		 Chr3:38942864 Fat4 Coding-NonSynonymous
Rr575724 662 bp distal
Rr575725 within coordinates of
 SNP A/G A G A A A
rs239768980
MGI SNP Detail
Alliance Variant		 Chr3:38942867 Fat4 Coding-NonSynonymous
Rr575724 665 bp distal
Rr575725 within coordinates of
 SNP A/G G G G G G G G G G G G G G G G G G G G A G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G
rs253176558
MGI SNP Detail
Alliance Variant		 Chr3:38943163 Fat4 Coding-Synonymous
Rr575724 961 bp distal
 SNP C/T C C C C C C C C C C C C C C C C C C C T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C
rs221919718
MGI SNP Detail
Alliance Variant		 Chr3:38943328 Fat4 Coding-Synonymous
Rr575724 1126 bp distal
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs236385812
MGI SNP Detail
Alliance Variant		 Chr3:38943436 Fat4 Coding-Synonymous
Rr575724 1234 bp distal
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G G G G G G G G G
rs247861949
MGI SNP Detail
Alliance Variant		 Chr3:38943458 Fat4 Coding-Synonymous
Rr575724 1256 bp distal
 SNP C/T T T T T T T T T T T T T T T T T T T T C T T C T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T
rs222924338
MGI SNP Detail
Alliance Variant		 Chr3:38943523 Fat4 Coding-Synonymous
Rr575724 1321 bp distal
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs242857342
MGI SNP Detail
Alliance Variant		 Chr3:38943614 Fat4 Coding-Synonymous
Rr575724 1412 bp distal
 SNP A/C C C C C C C C C C C C C C C C C C C C A C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C
rs265643584
MGI SNP Detail
Alliance Variant		 Chr3:38943883 Fat4 Coding-Synonymous
Rr575724 1681 bp distal
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs6274061
MGI SNP Detail
Alliance Variant		 Chr3:38944034 Fat4 Coding-Synonymous
Rr575724 1832 bp distal
 SNP C/T T T C T T T T
rs242995221
MGI SNP Detail
Alliance Variant		 Chr3:38944126 Fat4 Coding-Synonymous
Rr575724 1924 bp distal
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C C C C C C C C C
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Showing SNP(s) 1 - 40 of 40
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
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Send questions and comments to User Support. 		last database update
03/25/2025
MGI 6.24 		The Jackson Laboratory