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Mouse SNP Summary
Symbol
Name
ID 		Rr575971
regulatory region 575971
MGI:8038103

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Showing SNP(s) 1 - 35 of 35

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SNP ID
(GRCm39)		 Map Position
(GRCm39)		 Gene & Category Variation
Type		 Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
129X1/SvJ
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PL/J
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs249540978
MGI SNP Detail
Alliance Variant		 Chr3:41517683 Cpgi13118 within coordinates of
Gm31266 within coordinates of
Jade1 Intron
Rr575965 within coordinates of
Rr575971 1952 bp proximal
 SNP C/T C C C C C C C C C C C C C C C C C C C T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C
rs212217255
MGI SNP Detail
Alliance Variant		 Chr3:41517853 Cpgi13118 within coordinates of
Jade1 Intron
Jade1 mRNA-UTR
Jade1 Noncoding-Transcript-Variant
Rr575965 within coordinates of
Rr575971 1782 bp proximal
Tssr29003 within coordinates of
 SNP G/T G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G T G G G
rs236933400
MGI SNP Detail
Alliance Variant		 Chr3:41517929 Cpgi13118 within coordinates of
Jade1 Intron
Jade1 mRNA-UTR
Jade1 Noncoding-Transcript-Variant
Rr575965 within coordinates of
Rr575971 1706 bp proximal
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C
rs251186310
MGI SNP Detail
Alliance Variant		 Chr3:41518509 Cpgi13118 within coordinates of
Jade1 Intron
Jade1 Noncoding-Transcript-Variant
Rr575967 within coordinates of
Rr575971 1126 bp proximal
 SNP A/C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C A C C C C
rs31378148
MGI SNP Detail
Alliance Variant		 Chr3:41518660 Cpgi13118 within coordinates of
Jade1 Intron
Jade1 Noncoding-Transcript-Variant
Rr575971 975 bp proximal
 SNP C/T T C C T T T
rs233728088
MGI SNP Detail
Alliance Variant		 Chr3:41518685 Cpgi13118 within coordinates of
Jade1 Intron
Jade1 Noncoding-Transcript-Variant
Rr575971 950 bp proximal
 SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs30546399
MGI SNP Detail
Alliance Variant		 Chr3:41518825 Jade1 Intron
Jade1 Noncoding-Transcript-Variant
Rr575969 within coordinates of
Rr575971 810 bp proximal
 SNP A/G G A A G G G
rs226872463
MGI SNP Detail
Alliance Variant		 Chr3:41518874 Jade1 Intron
Jade1 Noncoding-Transcript-Variant
Rr575969 within coordinates of
Rr575971 761 bp proximal
 SNP C/G C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C G C C C C
rs250294579
MGI SNP Detail
Alliance Variant		 Chr3:41518893 Jade1 Intron
Jade1 Noncoding-Transcript-Variant
Rr575969 within coordinates of
Rr575971 742 bp proximal
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs238807690
MGI SNP Detail
Alliance Variant		 Chr3:41519582 Cpgi13119 within coordinates of
Jade1 Intron
Jade1 mRNA-UTR
Jade1 Noncoding-Transcript-Variant
Rr575970 within coordinates of
Rr575971 53 bp proximal
 SNP C/G C C C C C C C C C C C C C C C C C C C G C C G C C C C G C C C C G C C C C G C G C C C C C C C G C C C C
rs255785635
MGI SNP Detail
Alliance Variant		 Chr3:41519666 Cpgi13119 within coordinates of
Jade1 Intron
Jade1 mRNA-UTR
Jade1 Noncoding-Transcript-Variant
Rr575970 within coordinates of
Rr575971 10 bp distal
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G A G G G G A G G G G G A G G G G A G A G G G G G G G G G G G G
rs227848653
MGI SNP Detail
Alliance Variant		 Chr3:41519687 Cpgi13119 within coordinates of
Jade1 Intron
Jade1 mRNA-UTR
Jade1 Noncoding-Transcript-Variant
Rr575970 within coordinates of
Rr575971 31 bp distal
 SNP C/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G C G G G G
rs239469382
MGI SNP Detail
Alliance Variant		 Chr3:41519753 Cpgi13119 within coordinates of
Jade1 Intron
Jade1 mRNA-UTR
Jade1 Noncoding-Transcript-Variant
Rr575970 within coordinates of
Rr575971 97 bp distal
 SNP C/T C C C C C C C C C C C C C C C C C C T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C
rs586680457
MGI SNP Detail
Alliance Variant		 Chr3:41519880 Cpgi13119 within coordinates of
Jade1 Intron
Jade1 Noncoding-Transcript-Variant
Rr575970 within coordinates of
Rr575971 224 bp distal
 SNP G/T G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G T G G G G
rs263238630
MGI SNP Detail
Alliance Variant		 Chr3:41520381 Cpgi13119 within coordinates of
Jade1 Intron
Jade1 Noncoding-Transcript-Variant
Rr575970 within coordinates of
Rr575971 725 bp distal
 SNP G/T G T
rs232867742
MGI SNP Detail
Alliance Variant		 Chr3:41520568 Cpgi13119 within coordinates of
Jade1 Intron
Jade1 Noncoding-Transcript-Variant
Rr575970 within coordinates of
Rr575971 912 bp distal
 SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs253597192
MGI SNP Detail
Alliance Variant		 Chr3:41520670 Cpgi13119 within coordinates of
Jade1 Intron
Jade1 Noncoding-Transcript-Variant
Rr575971 1014 bp distal
Rr575973 within coordinates of
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G A G G G G G G G G G G G G G G G A G A G G G G G G G G G G G G
rs225302064
MGI SNP Detail
Alliance Variant		 Chr3:41520677 Cpgi13119 within coordinates of
Jade1 Intron
Jade1 Noncoding-Transcript-Variant
Rr575971 1021 bp distal
Rr575973 within coordinates of
 SNP C C C
rs230777340
MGI SNP Detail
Alliance Variant		 Chr3:41520821 Cpgi13119 within coordinates of
Jade1 Intron
Jade1 Noncoding-Transcript-Variant
Rr575971 1165 bp distal
Rr575973 within coordinates of
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs245003164
MGI SNP Detail
Alliance Variant		 Chr3:41520852 Jade1 Intron
Jade1 Noncoding-Transcript-Variant
Rr575971 1196 bp distal
Rr575973 within coordinates of
 SNP A/G A A A A A A A A A A A A A A A A A A A G A A G A A A A G A A A A A G A A A A G A G A A A A A A A G A A A A
rs215870901
MGI SNP Detail
Alliance Variant		 Chr3:41520911 Jade1 Intron
Jade1 Noncoding-Transcript-Variant
Rr575971 1255 bp distal
Rr575973 within coordinates of
 SNP C/G C C C C C C C C C C C C C C C C C C C G C C G C C C C G C C C C C G C C C C G C G C C C C C C C G C C C C
rs233783694
MGI SNP Detail
Alliance Variant		 Chr3:41520945 Jade1 Intron
Jade1 Noncoding-Transcript-Variant
Rr575971 1289 bp distal
Rr575973 within coordinates of
 SNP C/T C C C C C C C C C C C C C C C C C C C T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C
rs255115776
MGI SNP Detail
Alliance Variant		 Chr3:41521027 Jade1 Intron
Jade1 Noncoding-Transcript-Variant
Rr575971 1371 bp distal
Rr575973 within coordinates of
 SNP C/G C C C C C C C C C C C C C C C C C C C G C C C C C C C C C C C C C C C C C C C C C C C C C C C C G C C C C
rs219313654
MGI SNP Detail
Alliance Variant		 Chr3:41521086 Jade1 Intron
Jade1 Noncoding-Transcript-Variant
Rr575971 1430 bp distal
Rr575973 within coordinates of
 SNP A/G A A A A A A A A A A A A A A A A A A A G A A G A A A A G A A A A A G A A A A G A G A A A A A A A G A A A A
rs239705592
MGI SNP Detail
Alliance Variant		 Chr3:41521114 Jade1 Intron
Jade1 Noncoding-Transcript-Variant
Rr575971 1458 bp distal
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
SNP ID
(GRCm39)		 Map Position
(GRCm39)		 Gene & Category Variation
Type		 Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
129X1/SvJ
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PL/J
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs261657183
MGI SNP Detail
Alliance Variant		 Chr3:41521123 Jade1 Intron
Jade1 Noncoding-Transcript-Variant
Rr575971 1467 bp distal
 SNP A/G G G G G G G G G G G G G G G G G G G G A G G A G G G G A G G G G G A G G G G A G A G G G G G G G A G G G G
rs220540784
MGI SNP Detail
Alliance Variant		 Chr3:41521185 Jade1 Intron
Jade1 Noncoding-Transcript-Variant
Rr575971 1529 bp distal
 SNP C/G G G G G G G G G G G G G G G G G G G G C G G C G G G G C G G G G G C G G G G C G C G G G G G G G C G G G G
rs238427229
MGI SNP Detail
Alliance Variant		 Chr3:41521283 Jade1 Intron
Jade1 Noncoding-Transcript-Variant
Rr575971 1627 bp distal
 SNP C/T T T T T T T T T T T T T T T T T T T T C T C C T T T T C T T T T T C T T T T C T C T T T T T T T C T T T C
rs250094683
MGI SNP Detail
Alliance Variant		 Chr3:41521405 Jade1 Intron
Jade1 Noncoding-Transcript-Variant
Rr575971 1749 bp distal
 SNP C/G G G G G G G G G G G G G G G G G G G G C G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G
rs221666245
MGI SNP Detail
Alliance Variant		 Chr3:41521412 Jade1 Intron
Jade1 Noncoding-Transcript-Variant
Rr575971 1756 bp distal
 SNP G/T G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G T G G G G
rs239507127
MGI SNP Detail
Alliance Variant		 Chr3:41521467 Jade1 Intron
Jade1 Noncoding-Transcript-Variant
Rr575971 1811 bp distal
 SNP A/G A A A A A A A A A A A A A A A A A A A G A A G A A A A G A A A A A G A A A A G A G A A A A A A A G A A A A
rs264538560
MGI SNP Detail
Alliance Variant		 Chr3:41521484 Jade1 Intron
Jade1 Noncoding-Transcript-Variant
Rr575971 1828 bp distal
 SNP A/G G G G G G G G G G G G G G G G G G G G A G G A G G G G A G G G G G A G G G G A G A G G G G G G G A G G G G
rs234408800
MGI SNP Detail
Alliance Variant		 Chr3:41521514 Jade1 Intron
Jade1 Noncoding-Transcript-Variant
Rr575971 1858 bp distal
 SNP A/G G G G G G G G G G G G G G G G G G G G A G A A G G G G A G G G G G A G G G G A G A G G G G G G G A G G G A
rs241985948
MGI SNP Detail
Alliance Variant		 Chr3:41521529 Jade1 Intron
Jade1 Noncoding-Transcript-Variant
Rr575971 1873 bp distal
 SNP A/G A A A A A A A A A A A A A A A A A A A G A G G A A A A G A A A A A G A A A A G A G A A A A A A A G A A A G
rs264534811
MGI SNP Detail
Alliance Variant		 Chr3:41521646 Jade1 Intron
Jade1 Noncoding-Transcript-Variant
Rr575971 1990 bp distal
 SNP A/C A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A C A A A A
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Showing SNP(s) 1 - 35 of 35
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
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Send questions and comments to User Support. 		last database update
03/18/2025
MGI 6.24 		The Jackson Laboratory